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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7724#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1267 fasta sequence
[TTTTTAGTGTTGTGATAGTGATGTTTGTTAAATGTATGCTCAGTATAATAATGCTAGTGTATAATAGAAGGGGGTGTGGTTGGTTGTTGTTAAGACGATGAATCACTTTCGATCTCTCGCGTATCGTCATCATCATCGTCTTCCTGCTTCATTATAGTATCGATGTAAAAACACTCTATGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTAC-GGTTTAAGGCCGGTGTGCAACATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTGTATGGCTTGAGACCAGTATGTAACATTTGATGTTTAATCATGTTGGCGTGTTGCG-TAAATGCCTTTTCGCAAACGGGACACTTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCATGCTGCGAGAACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGCTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGCCAGTTGGGTGAAGCCTTTGTTACAAATCTGACAAACGAAAGGACGTTCGCCCGTGTGTGCCTTGGTGTACTTCCACATGGAACTATGGCTGGGAAATTCTTTGCTGCATATTTCGCACTTAAACTTGTTCTCCGTCAAATGCTTTGTCCGGTGCTGTTCCATTTCCTCCATCGTATCGAAACGCTTCCGGCACTGTGGACACTTGATTTTGTTGAGATTGATAAGCGTATTGCCCAGGGATAGCGACACGACAAAATGCTTATTGTCAACCAGATGATCCTGCTGGAGCATTTCCGACCGTGTTAGCTCTATCACACCATCATCGAATTGGGTTTGCAGCGGGTAGAACATGGTTTTGGCCTGCTGCAGCGGCTGCTGCTCCGGTGACTGCTCCGGGTTGGTGGCCGCTGCTCAAGGACACGCACGGAAAAGGGGGGGATGAGATGAAGATATATCACAGCTGCTGCTAAGTTGGCCACACACACTGGAGAGAGCACACGGCCCTGCTGCTGCTGCTGGAGCACGTTCGATCGGGAAGGCGACGCACCACACAACCGCGCTCCA-GCGTACACGCGACACAAGAGAGCGCTGCTGATCCGGAAGCCGCTGCTGCTGCTGCTGTGTCG]
[+] EMBL CNS08L1S [TTTTTAGTGTTGTGATAGTGATGTTTGTTAAATGTATGCTCAGTATAATAATGCTAGTGTATAATAGAAGGGGGTGTGGTTGGTTGTTGTTAAGACGATGAATCACTTTCGATCTCTCGCGTATCGTCATCATCATCGTCTTCCTGCTTCATTATAGTATCGATGTAAAAACACTCTATGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTAC GGTTTAAGGCCGGTGTGCAACATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTGTATGGCTTGAGACCAGTATGTAACATTTGATGTTTAATCATGTTGGCGTGTTGCG TAAATGCCTTTTCGCAAACGGGACACTTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCATGCTGCGAGAACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGCTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGCCAGTTGGGTGAAGCCTTTGTTACAAATCTGACAAACGAAAGGACGTTCGCCCGTTTGTTCCTTGGTGTACTTCCACATGGAACTATGGCTGGGAAATTCTTTGCTGCATATTTCGCACTTAAACTTGTTCTCCGTCAAATGCTTTGTCCGGTGCTGTTCCATTTCCTCCATCGTATCGAAACGCTTCCGGCACTGTGGACACTTGATTTTGTTGAGATTGAAAAGCGTATTGCCCAGGGATAGCGACACGACAAAATGCTTATTGTCAACCAGATGATCCTGCTGGAGCATTTCCGACCGTGTTA ]
[+] EMBL CNS08X6P [ TGTT AATGTATGCTCAGTATAATAATGCTAGTGTATAATAGAAGGGGGTGTGGTTGGTTGTTGTTAAGACGATGAATCACTTTCGATCTCTCGCGTATCGTCATCATCATCGTCTTCCTGCTTCATTATAGTATCGATGTAAAAACACTCTATGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTAC GGTTTAAGGCCGGTGTGCAACATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTGTATGGCTTGAGACCAGTATGTAACATTTGATGTTTAATCATGTTGGCGTGTTGGT TAAATGCCTTTTCGCAAACGGGACACTTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCATGCTGGGAGAAGGGTTTGTGGGAGAGGGGAGATTTGTAGGGGTTAATTTGGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGGTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGGCAGTGGGGTGAAGCCTTTGTTACAAATCTGACAAACGAAAGGA ]
[+] EMBL CNS08VPR [ ATGTATGCTCAGTATAATAATGCTAGTGTATAATAGAAGGGGGTGTGGTTGGTTGTTGTTAAGACGATGAATCACTTTCGATCTCTCGCGTATCGTCATCATCATCGTCTTCCTGCTTCATTATAGTATCGATGTAAAAACACTCTATGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTACGGGTTTAAGGCCGGTGTGCAACATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTGTATGGCTTGAGACCAGTATGTAACACTTGATGTTTAATCATGTTGGCGTGTTGCGATAAATGCCTTTTCGCAAACGGGACAATTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCATGCTGCGAGAACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGCTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGCCAGTGGGGTGAAGCCTTTGTTACAAATCTGACAAACGAAAGGACGTTCGCCCGTGTGTCCCTTGGTGTGCTTACACATGGAACTATGGCTGG ]
[-] EMBL CNS08L1R [ GGACATTTTTATGGCTTGAGACCAGTATGTAACATTTGATGTTTAATCATGTTGGCGTGTTGCG TAAATGCCTTTTCGCAAACGGGACACTTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCATGCTGCGAGAACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGCTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGCCAGTTGGGTGAAGCCTTTGTTACAAATCTGACAAACGAAAGGACGTTCGCCCGTGTGTGCCTTGGTGTACTTCCACATGGAACTATGGCTGGGAAATTCTTTGCTGCATATTTCGCACTTAAACTTGTTCTCCGTCAAATGCTTTGTCCGGTGCTGTTCCATTTCCTCCATCGTATCGAAACGCTTCCGGCACTGTGGACACTTGATTTTGTTGAGATTGATAAGCGTATTGCCCAGGGATAGCGACACGACAAAATGCTTATTGTCAACCAGATGATCCTGCTGGAGCATTTCCGACCGTGTTAGCTCTATCACACCATCATCGAATTGGGTTTGCAGCGGGTAGAACATGGTTTTGGCCTGCTGCAGCGGCTGCTGCTCCGGTGACTGCTCCAGGTTGGTGGCCGCTGCTCAAGGACACGCACGGAAAAGGGGGGGATGAGATGAAGATATATCACAGCTGCTGCTAAGTTGGCCACACACACTGGAGAGAGCACACGGCCCTGCTGCTGCTGCTGGAGCACGTTCGATCGGGAAGGCGACGCACCACACAAGCGCGCTCCA GCGTA ]
[-] EMBL CNS09QCE [ GACACTTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCATGCTGCGAGAACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGCT ]
[-] EMBL CNS08VPQ [ ACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGAAGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTGAACGGCTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGCCAGTTGGGTGAAGCCTTTGTTACAAATCTGACAAACGAAAGGACGTTCGCCCGTGTGTGCCTTGGTGTGCTTCCACATGGAACTATGGCTGGGAAATTCTTTGCTGCATATTTCGCACTTAAACTTGTTCTCCGTCAAATGCTTTGTCCGGTGCTGTTCCATTTCCTCCATCGTATCGAAACGCTTCCGGCACTGTGGACACTTGATTTTGTTGAGATTGATAAGCGTATTGCCCAGGGATAGCGACACGACAAAATGCTTATTGTCAACCAGATGATCCTGCTGGAGCATTTCCGACCGTGTTAGCTCTATCACACCATCATCGAATTGGGTTTGCAGCGGGTAGAACATGGTTTTGGCCTGCTGCAGCGGCTGCTGCTCCGGTGACTGCTCCGGGTTGGTGGCCGCTGCTCAAGGACACGCACGGAAAAGGGGGGGATGAGATGAAGATATATCACAGCTGCTGCTAAGTTGGCCACACACACTGGAGAGAGCACACGGCCCTGCTGCTGCTGCTGGAGCACGTTCGATCGGGAAGGCGACGCACCACACAACCGCGCTCCACGCGTACACGCGACACAAGAGAGCGCTGCTGATCCGGAAGCCGCTGCTGCTGCTGCTGTGTCG]
[-] EMBL CNS08X6O [ ATTTGGTGCATGGTATCGAAACGCTTCCGGCACTGTGGACACTTGATTTTGTTGAGATTGATAAGCGTATTGCCCAGGGATAGCGACACGACAAAATGCTAATTGTCAACCAGATGATCCTGCTGGAGCATTTCCGACCGTGTTAGCTCTATCACACCATCATCGAATTGGGTTTGCAGCGGGTAGAACATGGTTTTGGCCTGCTGCAGCGGCTGCTGCTCCGGTGACTGCTCCGGGTTGGTGGCCGCTGCTCAAGGACACGCACGGAAAAGGGGGGGATGAGATGAAGATATATCACAGCTGCTGCTAAGTTGGCCACACACACTGGAGAGAGCACACGGCCCTGCTGCTGCTGCTGGAGCACGTTCGATCGGGAAGGCGACGCACCACACAACCCCGCTCCA GCGTACACGCGACACAAGAGAGCGCTGCTGATCCGGAAGCCGCTGCTGC ]
consensusID : consensus_7724#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence
[GTGGCGGTTAGTAGTCTTATAGTGGTTATCCGGTTTTTAGACGGCAACCATAATCTACAAGCAANTCCCTATGTCGCAAGCGGAACGGTTAGGTTAGGCGGTTTGAATTTATGCGCCAAAGTTACAAANTTGGGTTTGACTAAAGTAAAACCCCTTATGTAATATCCTCTGCCATACGTCGAATTTAANTAATTGTTTAGGTTGNGTTTCGTGGATCCCAAGTGGATGTGCTCTTGTTAAAATGTTATGCCTCAGTATAATAATGCTACGTGTTAGTAATAGAAGGGGGGTTNTGGTTGTTGCTGTTAAGACGATGAATCACTTTCGATCGTCTCGCGTATCGTCATCAATCATCGTCTTCCCGCCTTCATTATAGTATCGATGTAAAACACTCTATGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTACGGTTTAAGGCCGGTGTGCAACATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTGTATGGCTTGAGACCAGTATGTAACATTTGATGTTAATCATGTTGGCGTGTACCTCGGGGCNATTCTGCTGA]
[-] EMBL AL931120 [GTGGCGGTTAGTAGTCTTATAGTGGTTATCCGGTTTTTAGACGGCAACCATAATCTACAAGCAANTCCCTATGTCGCAAGCGGAACGGTTAGGTTAGGCGGTTTGAATTTATGCGCCAAAGTTACAAANTTGGGTTTGACTAAAGTAAAACCCCTTATGTAATATCCTCTGCCATACGTCGAATTTAANTAATTGTTTAGGTTGNGTTTCGTGGATCCCAAGTGGATGTGCTCTTGTTAAAATGTTATGCCTCAGTATAATAATGCTACGTGTTAGTAATAGAAGGGGGGTTNTGGTTGTTGCTGTTAAGACGATGAATCACTTTCGATCGTCTCGCGTATCGTCATCAATCATCGTCTTCCCGCCTTCATTATAGTATCGATGTAAAACACTCTATGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTACGGTTTAAGGCCGGTGTGCAACATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTGTATGGCTTGAGACCAGTATGTAACATTTGATGTTAATCATGTTGGCGTGTACCTCGGGGCNATTCTGCTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7724#0 TTTTTAGTGTTGTGATAGTGATGTTTGTTAAATGTATGCTCAGTATAATAATGCTAGTGT 60
consensus_7724#1 --------GTGGCGGT--TAGTAGTCTTATAGTGGTTATCCGGTTTTTAGACGGCAAC-C 49
** * * * * * * * * ** * * ** * * * *
consensus_7724#0 ATAATAGAAGGGGGTGTGGTTGGTTGTTGTTAAGACGATGAATCACTTTCGATCTCTCGC 120
consensus_7724#1 ATAATCTACAAGCAANTCCCTA--TGTCGC-AAGCGGAACGGTTAGGTTAGGCGGTTTGA 106
***** * * * * *** * *** ** * * ** * * *
consensus_7724#0 GTATCGTCATCATCATCGTCTTCCTG--CTTCATTATAGTATCGATGTAAAAACACTCTA 178
consensus_7724#1 ATTTATGCGCCAAAGTTACAAANTTGGGTTTGACTAAAGT---------AAAACCCCTTA 157
* * * ** * ** ** * ** *** ***** * **
consensus_7724#0 TGGAATTACCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCCTGCTGGGCGAACGCCT 238
consensus_7724#1 TGTAATATCC--TCTGCCATACGTCGAATTTAANTA-ATTGTTTAGGTTGNGTTTCGTGG 214
** *** ** * ** * *** *** * * *** * * * **
consensus_7724#0 TGCCACAGGTGGAACATTTGTACGGTTTAAGGCCGGTGTGCAACATT-TGATGTTTCACC 297
consensus_7724#1 -ATCCCAAGTGGA---TGTGCTCTTGTTAAAAT-GTTATGCCTCAGTATAATAATGCTAC 269
* ** ***** * ** * **** * * *** ** * * ** * * *
consensus_7724#0 ATGTTGGCCTGCTGCGTAAAGGCTT---TATCACAAACAGGACATTTGTATGGCTTGAGA 354
consensus_7724#1 GTGTTAGTAATAGAAGGGGGGTTNTGGTTGTTGCTGTTAAGACGAT-GAATCACTTTCGA 328
**** * * * * * * * * *** * * ** *** **
consensus_7724#0 CCAGTATGTAACATTTGATGTTTAATCATGTTGGCGTGTTGCGTAAATGCCTTTTCGCAA 414
consensus_7724#1 TCG---TCTCGCGTATCGTCATCAATCAT--CGTCTTCCCGCCTTCATTATAGTATCGAT 383
* * * * * * * * ****** * * * ** * ** * *
consensus_7724#0 ACGGGACACTTGTACGGCTTTAATCCTGTATGAAGCATTTGATGTTTGACCATGTTTGCA 474
consensus_7724#1 GTAAAACACTC-TATGGAATTA--CCGGTATGAAGCATCTCGTGTTTGACCATGTTGGCC 440
***** ** ** *** ** *********** * ************** **
consensus_7724#0 TGCTGCGAGAACGCTTTCTCGCACACCGGACATTTGTACGGCTTAAGACCGGTATGCAGA 534
consensus_7724#1 TGCTGGGCGAACGCCTTGCCACAGGTGGAACATTTGTACGGTTTAAGGCCGGTGTGCAAC 500
***** * ****** ** * ** * ************ ***** ***** ****
consensus_7724#0 AGTTGATGTTTCAGCATGTTGGCTTGCTGGGTGAAGCATTTTTCACAGATGGGACACTTG 594
consensus_7724#1 ATTTGATGTTTCACCATGTTGGCCTGCTGCGTAAAGGCTTTATCACAAACAGGACATTTG 560
* *********** ********* ***** ** *** *** ***** * ***** ***
consensus_7724#0 AACGGCTTTAGTCCATTGTGGACGAGATCATGTCGTTGCAGGTTGGCCAGTTGGGTGAAG 654
consensus_7724#1 TATGGCTTGAGACCAGTATGTAACATTTGATGTTAAT-CATGTTGGCGTGTACCTCGGGG 619
* ***** ** *** * ** * * * **** * ** ****** ** * *
consensus_7724#0 CCTTTGTTACAAATCTGACAAACGAAAGGACGTTCGCCCGTGTGTGCCTTGGTGTACTTC 714
consensus_7724#1 CNATTCTGCTGA------------------------------------------------ 631
* ** * *
consensus_7724#0 CACATGGAACTATGGCTGGGAAATTCTTTGCTGCATATTTCGCACTTAAACTTGTTCTCC 774
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 GTCAAATGCTTTGTCCGGTGCTGTTCCATTTCCTCCATCGTATCGAAACGCTTCCGGCAC 834
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 TGTGGACACTTGATTTTGTTGAGATTGATAAGCGTATTGCCCAGGGATAGCGACACGACA 894
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 AAATGCTTATTGTCAACCAGATGATCCTGCTGGAGCATTTCCGACCGTGTTAGCTCTATC 954
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 ACACCATCATCGAATTGGGTTTGCAGCGGGTAGAACATGGTTTTGGCCTGCTGCAGCGGC 1014
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 TGCTGCTCCGGTGACTGCTCCGGGTTGGTGGCCGCTGCTCAAGGACACGCACGGAAAAGG 1074
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 GGGGGATGAGATGAAGATATATCACAGCTGCTGCTAAGTTGGCCACACACACTGGAGAGA 1134
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 GCACACGGCCCTGCTGCTGCTGCTGGAGCACGTTCGATCGGGAAGGCGACGCACCACACA 1194
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 ACCGCGCTCCAGCGTACACGCGACACAAGAGAGCGCTGCTGATCCGGAAGCCGCTGCTGC 1254
consensus_7724#1 ------------------------------------------------------------
consensus_7724#0 TGCTGCTGTGTCG 1267
consensus_7724#1 -------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||