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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7732#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 902 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAGGAGGGCGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCAACCAGCACACCGTACGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACTGGCGTACGAGATGAACGGTCAACCGTTGAACCGCGATCATGGCTTCCCGGTGCGCGTGATTGTCCCGGGGGTGGTTGGATCGCGCAACGTGAAATGGTTGGGCCGGATTGTGGTGTCGCGGGCGGAAAGTTCCTCCCACTGGCAGCAGAATGATTACAAATCCTTCAGCCCCAGCACGGATTGGGATACGGTCGATTTTAAGAGTGCACCGGCGATACAGAACATGCCCGTCACGTCCGCTATCTGTACACCGGCCAGCGGAGAGACGGTGCAGGTGGAAAAGGACGGATACGTGACGGTGCGGGGGTACGCTTGGTCCGGCGGTGGGTCGGAGATTGTGCGCGTTGATCTGACGGCGGATGGTGGGAAAACGTGGACGGTGGCAAAGTTGGATGAGAGTGAGAAGGGTACTGGGCCAGGGCGGCACTGGTCGTGGTCA-CTGTGGACGGCGAAAATTCCGGTACCGAAGGG-GCAGCGCGGGGCATCGCTCGAGATCGTTTCGAAAGCGGTCGACAGTAACTACAACACGCAGCCGGAATCGTTCGCGAACATCTGGAATCTGCGGGGCGTCGTCGGCAATGCGTACAGCCGGGTGAAAGTGAATGTAAAGTAAACCCCGCCCGCGTGCTGCCAACCATAGTTGATAAGGGTGATGAGGGGCGATAAGAAAGGAACTATTTTGTTCAGTAGTCGTGTAGTGCGATTATTACTTGATTTCGTTCTGCCGT]
[+] EMBL BM613168 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAGGAGGGCGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCAACCAGCACACCGTACGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACTGGCGTACGAGATGAACGGTCAACCGTTGAACCGCGATCATGGCTTCCCGGTGCGCGTGATTGTCCCGGGGGTGGTTGGATCGCGCAACGTGAAATGGTTGGGCCGGATTGTGGTGTCGCGGGCGGAAAGTTCCTCCCACTGGCAGCAGAATGATTACAAATCCTTCAGCCCCAGCACGGATTGGGATACGGTCGATTTTAAGAGTGCACCGGCGATACAGAACATGCCCGTCACGTCCGCTATCTGTACACCGGCCAGCGGAGAGACGGTGCAGGTGGAAAAGGACGGATACGTGACGGTGCGGGGGTACGCTTGGTCCGGCGGTGGGTCGGAGATTGTGCGCGTTGATCTGACGGCGGATGGTGGGAAAACGTGGACGGTGGCAAAGTTGGATGAGAGTGAGAAGGGTACTGGGCCAGGGCGGCACTGGTCGTGGTCA CTGTGGACGGCGAAAATTCCGGTACCGAAGGGTGCAGCGCGGGGCATCGCTCGAGATC ]
[+] EMBL BM609591 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAGGAGGGCGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCAACCAGCACACCGTACGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACTGGCGTACGAGATGAACGGTCAACCGTTGAACCGCGATCATGGCTTCCCGGTGCGCGTGA ]
[+] EMBL BX606430 [ GGACCCAACCAGCACACCGTACGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACTGGCGTACGAGATGAACGGTCAACCGTTGAACCGCGATCATGGCTTCCCGGTGCGCGTGATTGTCCCGGGGGTGGTTGGATCGCGCAACGTGAAATGGTTGGGCCGGATTGTGGTGTCGCGGGCGGAAAGTTCCTCCCACTGGCAGCAGAATGATTACAAATCCTTCAGCCCCAGCACGGATTGGGATACGGTCGATTTTAAGAGTGCACCGGCGATACAGAACATGCCCGTCACGTCCGCTATCTGTACACCGGCCAGCGGAGAGACGGTGCAGGTGGAAAAGGACGGATACGTGACGGTGCGGGGGTACGCTTGGTCCGGCGGTGGGTCGGAGATTGTGCGCGTTGATCTGACGGCGGATGGTGGGAAAACGTGGACCGTGGCAAAGTTGGATGAGAGTGAGAAGGGTACTGGGCCAGGGCGGCACTGGTCGTGGTCACCTGTGGA ]
[+] EMBL BX623367 [ GACCCGCGGGGCGATGTGATACTGGCGTACGAGATGAACGGTCAACCGTTGAACCGCGATCATGGCTTCCCGGTGCGCGTGATTGTCCCGGGGGTGGTTGGATCGCGCAACATGAAATGGTTGGGCCGGATTGTGGTGTCGCGGGCGGAAAGTTCCTCCCACTGGCAGCAGAATGATTACAAATCCTTCAGCCCCAGCACGGATTGGGATACGGTCGATTTTAAGAGTGCACCGGCGATACAGAACATGCCCGTCACGTCCGCTATCTGTACACCGGCCAGCGGAGAGACGGTGCAGGTGGAAAAGGACGGATACGTGACGGTGCGGGGGTACGCTTGGTCCGGCGGTGGGTCGGAGATTGTGCGCGTTGATCTGACGGCGGATGGTGGGAAAACGTGGACGGTGGCAAAGTTGGATGAGAGTGAGAAGGGTACTGGGCCAGGGCGGCACTGGTCGTGGTCA CTGTGGACGGCGAAAATTCCGGTACCGAAGGG GCAGCGCGGGGCATCGCTCGAGATCGTTTCGAAAGCGGTCGACAGTAACTACAACACGCAGCCGGAATCGTTCGCGAACATCTGGAATCTGCGGGGCGTCGTCGGCAATGCGTACAGCCGGGTGAAAGTGAATGTAAAGTAAACCCCGCCCGCGTGCTGCCAACCATAGTTGATAAGGGTGATGAGGGGCGATAAGAAAGGAACTATTTTGTTCAGTAGTCGTGTAGTGCGATTATTACTTGATTTCGTTCTGCCGT]
[+] EMBL BX613691 [ ACTGGCAGCAGAATGATTACAAATCCTTCAGCCCCAGCACGGATTGGGATACGGTCGATTTTAAGAGTGCACCGGCGATACAGAACATGCCCGTCACGTCCGCTATCTGTACACCGGCCAGCGGAGAGACGGTGCAGGTGGAAAAGGACGGATACGTGACGGTGCGGGGGTACGCTTGGTCCGGCGGTGGGTCGGAGATTGTGCGCGTTGATCTGACGGCGGATGGTGGGAAAACGTGGACGGTGGCAAAGTTGGATGAGAGTGAGAAGGGTACAGGGCCAGGGCGGCACTGGTCGTGGTCA CTGTGGACGGCGAAAATTCCGGTACCGAAGGG GCAGCGCGGGGCATCGCTCGAGATCGTTTCGAAAGCGGTC ]
consensusID : consensus_7732#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 681 fasta sequence
[CCGCAGCGATAAGGTGATGCTGGCGGCCGGCGGTGCCATCGACCCGTTCTGGCACATCTTCCAGCAGCACAACACGAAGGAGGTGCTAACGTTGCTGGAATCGTACCGCATCGGTAATCTGCGGGCGGATGATGTGGTCAGTACGAAGGACCTGCACGATCCCTGGTCTGCGGAACCGAAGCGCCATCCGATTCTGAAGCCTGCGACACAGAAACCGTTCAACGCGGAACCACCGGCGTCCGTGCTGGTGGACAGTTTCTTGACGCCGAATGAATTTTTCTACGTCCGCAACCATCTCCCGGTGCCAGAGGTGGACATTAAAAGCTACGAGCTGGAGATGGAGAACGAAAAGACGGGCCGGAGTAAAACGATTCGCTTTCCGGATCTTCTCAAGTACCCGAAGCACACCGTCACGGCAACGATTATGTGTGGGGGCAATCGACGAAGTGAAATGATGGAGGTCAAACCGATCAAGGGACTGCCGTGGGGTGCTTCGGCCGTCGGCAATGCGCAGTGGACCGGTGCACGACTTTGCGATGTCCTGCGGGACATGGGCGTAAAGGAGGGCGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCAACCAGCACACCGTACGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACT]
[+] EMBL BM651751 [CCGCAGCGATAAGGTGATGCTGGCGGCCGGCGGTGCCATCGACCCGTTCTGGCACATCTTCCAGCAGCACAACACGAAGGAGGTGCTAACGTTGCTGGAATCGTACCGCATCGGTAATCTGCGGGCGGATGATGTGGTCAGTACGAAGGACCTGCACGATCCCTGGTCTGCGGAACCGAAGCGCCATCCGATTCTGAAGCCTGCGACACAGAAACCGTTCAACGCGGAACCACCGGCGTCCGTGCTGGTGGACAGTTTCTTGACGCCGAATGAATTTTTCTACGTCCGCAACCATCTCCCGGTGCCAGAGGTGGACATTAAAAGCTACGAGCTGGAGATGGAGAACGAAAAGACGGGCCGGAGTAAAACGATTCGCTTTCCGGATCTTCTCAAGTACCCGAAGCACACCGTCACGGCAACGATTATGTGTGGGGGCAATCGACGAAGTGAAATGATGGAGGTCAAACCGATCAAGGGACT ]
[+] EMBL BX622062 [ GTGCTAACGTTGCTGGAATCGTACCGCATCGGTAATTTGCGGGCGGATGATGTGGTCAGTACGAAGGACCTGCACGATCCCTGGTCTGCGGAACCGAAGCGCCATCCGATTCTGAAGCCTGCAACACAGAAACCGTTCAACGCGGAACCACCGGCGTCCGTGCTGGTGGACAGTTTCTTGACGCCGAATGAATTTTTCTATGTCCGCAACCATCTCCCGGTGCCGGAGGTGGACATTAAAAGCTACGAGCTGGAGATGGAGAACGAAAAGACGGGCCGGAGTAAAACGATTCGCTTTCCGGATCTTCTCAAGTACCCGAAGCACACCGTCACGGCAACGATTATGTGTGGGGGCAATCGACGAAGTGAAATGATGGAGGTCAAACCGATCAAGGGACTGCCGTGGGGTGCTTCGGCCGTCGGCAATGCGCAGTGGACCGGTGCACGACTTTGCGATGTCCTGCGGGACATGGGCGTAAAGGAGGGCGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCAACCAGCACACCGTACGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACT]
consensusID : consensus_7732#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence
[CTCAGCAGATTCCNAGTTAAGCACACGGCCTTCGGCCGGCATCTGTGTAACGTACGGGGTCGGCGTGTACGACATAACCTCCTTCGTGCCGAAGCACCCGGGCAGCGATAAGGTGATGCTAGCGGCGGCGGGCTATCGACCCGTTCTGGCACATCTTCCAGCAGCACAACACGAAGGAGGTGCTAACGTTGCTGGAATCGTACCGCATCGGTAATTTGCGGGCGGATGATGTGGTCAGTACGAAGACTGCACGANACCCTGGTCTGGGAACCGAAGCGCCATCCGATTCTGAAGCCTGCAACACAGAAACCGTTCAACGCGGAACCACCGGCGTCCGTGCTGGTGGACAGTTTCTTGACGCCGAATGAATTTTTTCTATGTCCGAAACATCTCCCCGGTGCCGGAGGTGGACATTAACAGCTACGAGCTGGAGATGGAGAAACGAAAAGAGGGCCGGACGTAAAAACGATTCGCTTTCCGGATCTTTCTCAAGGTACCCCGAAGGCACACCGTCAACGGCAAACGATTATGTGTTGGGGGGCAATTCGAACGAAGTTGACACTGATGGGAGGGTCAACACCCGACTCAAGGGGACTGNCGATGGGGTGTNCAGGCGTCGGACATGNCAGTGGACCAGGTGCACGA]
[+] EMBL AL695237 [CTCAGCAGATTCCNAGTTAAGCACACGGCCTTCGGCCGGCATCTGTGTAACGTACGGGGTCGGCGTGTACGACATAACCTCCTTCGTGCCGAAGCACCCGGGCAGCGATAAGGTGATGCTAGCGGCGGCGGGCTATCGACCCGTTCTGGCACATCTTCCAGCAGCACAACACGAAGGAGGTGCTAACGTTGCTGGAATCGTACCGCATCGGTAATTTGCGGGCGGATGATGTGGTCAGTACGAAGACTGCACGANACCCTGGTCTGGGAACCGAAGCGCCATCCGATTCTGAAGCCTGCAACACAGAAACCGTTCAACGCGGAACCACCGGCGTCCGTGCTGGTGGACAGTTTCTTGACGCCGAATGAATTTTTTCTATGTCCGAAACATCTCCCCGGTGCCGGAGGTGGACATTAACAGCTACGAGCTGGAGATGGAGAAACGAAAAGAGGGCCGGACGTAAAAACGATTCGCTTTCCGGATCTTTCTCAAGGTACCCCGAAGGCACACCGTCAACGGCAAACGATTATGTGTTGGGGGGCAATTCGAACGAAGTTGACACTGATGGGAGGGTCAACACCCGACTCAAGGGGACTGNCGATGGGGTGTNCAGGCGTCGGACATGNCAGTGGACCAGGTGCACGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7732#1 ------------------------------------------------------------
consensus_7732#2 ----------CTCAGCAGATTCCNAGTTAAGCACACGGCCTTCGGCCGGCATCTGTGTAA 50
consensus_7732#0 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAAAGGAGGG 60
consensus_7732#1 -------------------------------------------------CCGCAGCGATA 11
consensus_7732#2 CGTACGGGGTCGGCGTGTACGACATAACCTCCTTCGTGCCGAAGCACCCGGGCAGCGATA 110
consensus_7732#0 CGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCAACCAGCACACCGTA 120
* **
consensus_7732#1 AGGTG-ATGCTGGCGGCCGGC-GGTGCCATCGACCCGTTCTGGCACATCTTCCAGCAGCA 69
consensus_7732#2 AGGTG-ATGCTAGCGGC-GGC-GG-GCTATCGACCCGTTCTGGCACATCTTCCAGCAGCA 166
consensus_7732#0 CGGTGCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGATGTGATACTGGCGTA 180
**** * * * * *** ** ** ****** * * * * * * * *
consensus_7732#1 CAACACGAAGG---AGGTGCTAA----CGTTGCTGGAATCGTAC--CGCATCGGTAATCT 120
consensus_7732#2 CAACACGAAGG---AGGTGCTAA----CGTTGCTGGAATCGTAC--CGCATCGGTAATTT 217
consensus_7732#0 CGAGATGAACGGTCAACCGTTGAACCGCGATCATGGCTTCCCGGTGCGCGTGATTGTCCC 240
* * * *** * * * * * ** * *** ** *** * *
consensus_7732#1 GCGGGCGGATGATGTGGTCAGTACGAAGGACCTGCACGAT-CCCTGGTCTGCGGAACCGA 179
consensus_7732#2 GCGGGCGGATGATGTGGTCAGTACGAAGA--CTGCACGANACCCTGGTCTG-GGAACCGA 274
consensus_7732#0 GGGGGTGGTTGGATCGCGCAACGTGAAATGGTTGGGCCGGATTGTGGTGTCGCGGGCGGA 300
* *** ** ** * ** *** ** * **** * * * **
consensus_7732#1 AGCGCCATCCGATTCTGAAGCCTGCGACACAGAAACCGTTCAACGCGGAACC--ACCGGC 237
consensus_7732#2 AGCGCCATCCGATTCTGAAGCCTGCAACACAGAAACCGTTCAACGCGGAACC--ACCGGC 332
consensus_7732#0 AAGTTCCTCCCACTG-GCAGCAGAATGATTACAAATCCTTCAGCCCCAGCACGGATTGGG 359
* * *** * * * *** * *** * **** * * * * **
consensus_7732#1 GTCCGTGCTGGTG-GACAGTTTCTTGACGCCGAATGA-ATTTTT-CTACGTCCGCAA-CC 293
consensus_7732#2 GTCCGTGCTGGTG-GACAGTTTCTTGACGCCGAATGA-ATTTTTTCTATGTCCGAAA-CA 389
consensus_7732#0 ATACGGTCGATTTTAAGAGTGCACCGGCGATACAGAACATGCCCGTCACGTCCGCTATCT 419
* ** * * * *** * ** * * ** * ***** * *
consensus_7732#1 ATCTCCCGGT-GCCAGAG-----GTGGACATTAAAAGCTACGAGCTGGAGATGGAGAA-C 346
consensus_7732#2 TCTCCCCGGT-GCCGGAG-----GTGGACATTAACAGCTACGAGCTGGAGATGGAGAAAC 443
consensus_7732#0 GTACACCGGCCAGCGGAGAGACGGTGCAGGTGGAAAAGGACGGATACGTGACGGTGCGGG 479
**** * *** *** * * * * *** * ** ** *
consensus_7732#1 GAAAAGAC-GGGCCGGAGTAAAA-CG---ATTCGCTTTCCGGATCTT-CTCAAG-TACCC 399
consensus_7732#2 GAAAAGAG-GGCCGGACGTAAAAACG---ATTCGCTTTCCGGATCTTTCTCAAGGTACCC 499
consensus_7732#0 GGTACGCTTGGTCCGGCGGTGGGTCGGAGATTGTGCGCGTTGATCTGACGGCGGATGGTG 539
* * * ** * * * ** *** ***** * * *
consensus_7732#1 --GAAGCACACCGTCA-CGGCAA---CGATTATGTGT--GGGGGCAATC--GACGAAGTG 449
consensus_7732#2 CGAAGGCACACCGTCAACGGCAAA--CGATTATGTGTTGGGGGGCAATTCGAACGAAGTT 557
consensus_7732#0 --GGAAAACGTGGACGGTGGCAAAGTTGGATGAGAGTGAGAAGGGTACTGGGCCAGGGCG 597
** * * ***** * * * ** * ** * * *
consensus_7732#1 AA--ATGATGGA--GGTCAA--ACCGATC--AAGGGACTGCCG-TGGGGTGCTTCGGC-C 499
consensus_7732#2 GACACTGATGGGAGGGTCAACACCCGACTCAAGGGGACTGNCGATGGGGTG-TNCAGG-C 615
consensus_7732#0 GCACTGGTCGTGGTCACTGTGGACGGCGAAAATTCCGGTACCGAAGGGGCAGCGCGGGGC 657
* * * * * * ** **** * * *
consensus_7732#1 GTCGGCAATGCGCAGT--GGACC-GGTGCACGACT-TTGCGATGTCCTGCGGGA--CATG 553
consensus_7732#2 GTCGGACATGN-CAGT--GGACCAGGTGCACGA--------------------------- 645
consensus_7732#0 ATCGCTCGAGATCGTTTCGAAAGCGGTCGACAGTAACTACAACACGCAGCCGGAATCGTT 717
*** * * * * * *** **
consensus_7732#1 GGCGTAAAGGAGGGCGATGAAGAGGGTCACGTACAGTTCGAAGGGCTCGATACGGACCCA 613
consensus_7732#2 ------------------------------------------------------------
consensus_7732#0 CGCGAACATCTGGAATCTGCGGGGCGTCGTCGGCAATGCGTACAGCCGGGTGAAAGTGAA 777
consensus_7732#1 ACCAGCACACCGTACGGT-GCGTCCATTCCACTGGCCAAAGCGATGGACCCGCGGGGCGA 672
consensus_7732#2 ------------------------------------------------------------
consensus_7732#0 TGTAAAGTAAACCCCGCCCGCGTGCTGCCAACCATAGTTGATAAGGGTGATGAGGGGCGA 837
consensus_7732#1 TGTGATACT--------------------------------------------------- 681
consensus_7732#2 ------------------------------------------------------------
consensus_7732#0 TAAGAAAGGAACTATTTTGTTCAGTAGTCGTGTAGTGCGATTATTACTTGATTTCGTTCT 897
consensus_7732#1 -----
consensus_7732#2 -----
consensus_7732#0 GCCGT 902
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||