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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7824#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1153 fasta sequence
[GAATCCCCGAGGTGCAGTGACGGCCAAGATCAGCTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCTGGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGTGCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAACGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACGACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACGCCCGTCAAAGCGTGCCAGGATAAGGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAAGGTGACCTCGGGCAACACGAACGCACCGATCATCATGATCGCCGAGAAGGGTGCCCATCTGATTCGCCGGGCGTGGGGCGCTCGCTAGAGCTAATTGGACCCCTCTCCTCCCCTGTCCATCTACCGTGTGGACAGCACTTCTCCTAGCATTTACGAAATAGGGGACCGATTCATTTACCACCTAAGCTAATCGCGTTTTTAGGCACACCTCTTCTGCCCCTTTGTATGTCCGTCCCGGGTGTGTTGCCACGTGTCACGCGTCTTGTTCGAAGCGTTCGAGAGTTTGTTTTGTTTTGGAAAGTATTAGCTGCATCTTTACAAGAACAAAAAGTGACGGTTTGTTTCTGGCACTCGCTCTACCTCGAATGGCAAATGAATTCATTCCGCTTCCGGCACCGTTCACGTACGCCCGCGTTTGCTTCTATCAAACACGGGCGGTTTGCGTGCGCGTGTCACAACGGCTCAAGACAAATCGGCACACATTTCTCCCCTCTTCCTCTGAAAAAAAAACACTCCCTGGCGTGGCAAACCAGGCATGTCCCGCTCAAATTGTGTTAATGTAAAGTTAAATTATGAATATCAATAAAGATTA]
[+] EMBL AL932330 [GAATCCCCGAGGTGCAGTGACGGCCAAGATCAGCTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCTGGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGTGCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAACGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACGACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACGCCCGTCAAAGCGTGCCAGGATAAGGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCC ]
[+] EMBL BX609203 [ GGAGGATCACGACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACGCCCGTCAAAGCGTGCCAGGATAAGGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAAGGTGACCTCGGGCAACACGAACGCACCGATCATCATGATCGCCGAGAAGGGTGCCCATCTGATTCGCCGGGCGTGGGGCGCTCGCTAGAGCTAATTGGACCCCTCTCCTCCCCTGTCCATCTACCGTGTGGACAGCACTTCTCCTAGCATTTACGAAATAGGGGACCGATTCATTTACCACCTAAGCTAATCGCGTTTTTAGGCACACCTCTTCTGCCCCTTTGTATGTCCGTCCCGGGTGTGTTGCCACGTGTCACGCGTCTTGTTCGAAGCGTTCGAGAGTTTGTTTTGTTTTGGAAAGTATTAGCTGCATCTTTACAAGAACAAAAAGTGACGGTTTGTTTCTGGCACTCGCTCTACCTCGAATGGCAAATGAATTCATTCCGCTTCCGGCACCGTTCACGTACGCCCGCGTTTGCTTCTATTAAACACGGGCGGTTTGCGTGCGCGTGTCACAACGGCTCAAGACAAATCGGCACACATTTCTCCCCTCTTC ]
[+] EMBL BX610434 [ GGATCACGACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACGCCCGTCAAAGCGTGCCAGGATAAGGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAAGGTGACCTCGGGCAACACGAACGCACCGATCATCATGATCGCCGAGAAGGGTGCCCATCTGATTCGCCGGGCGTGGGGCGCTCGCTAGAGCTAATTGGACCCCTCTCCTCCCCTGTCCATCTACCGTGTGGACAGCACTTCTCCTAGCATTTACGAAATAGGGGACCGATTCATTTACCACCTAAGCTAATCGCGTTTTTAGGCACACCTCTTCTGCCCCTTTGTATGTCCGTCCCGGGTGTGTTGCCACGTGTCACGCGTCTTGTTCGAAGCGTTCGAGAGTTTGT ]
[+] EMBL BX625307 [ TGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGNGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAAGGTGACCTCGGGCAACACGAACGCACCGATCATCATGATCGCCGAGAAGGGTGCCCATCTGATTCGCCGGGCGTGGGGCGCTCGCTAGAGCTAATTGGACCCCTCTCCTCCCCTGTCCATCTACCGTGTGGACAGCACTTCTCCTAGCATTTACGAAATAGGGGACCGATTCATTTACCACCTAAGCTAATCGCGTTTTTAGGCACACCTCTTCTGCCCCTTTGTATGTCCGTCCCGGGTGTGTTGCCACGTGTCACGCGTCTTGTTCGAAGCGTTCGAGAGTTTGTTTTGTTTTGGAAAGTATTAGCTGCATCTTTACAAGAACAAAAAGTGACGGTTTGTTTCTGGCACTCGCTCTACCTCGAATGGCAAATGAATTCATTCCGCTTCCGGCACCGTTCACGTACGCCCGCGTTTGCTTCTATCAAACACGGGCGGTTTGCGTGCGCGTGTCACAACGGCTCAAGACAAATCGGCACACATTTCTCCCCTC ]
[+] EMBL BX602235 [ TCTTCTGCCCCTTTGTATGTCCGTCCCGG GTGTTGCCACGTGTCACGCGTCTTGTTCGAAGCGTTCGAAAGTTTGTTTTGTTTTGGAAAGTATTAGCTGCATCTTTACACGAACAAAAAGTGACGGTTTGTTTCTGGCACTCGCTCTACCTCGAATGGCAAATGAATTCATTCCGCTTCCGGCACTGTTCACGTACGCCCGCGTTTGCTTCTATCAAATACGGGCGGTTAGCGTGCGCGTGTCACAACAGCTCAAGACAAATCGGCACACATTTCTCCCCTCTTGCTCTGAAAAAAAAACACTCCCTGGCGTGGCAAACCAGGCATGTCCCGCTCAAATTGTGTTAATGTAAAGTTAAATTATGAATATCAATAAAGATTA]
consensusID : consensus_7824#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 849 fasta sequence
[CCGCGGACGCGTGGGCGGCATTGGACCGCGCGAACATCTGGAGAAGGTGGGCGTGCGTCCGATACACGATCTGCCGGGCGTGGGCAAGAACCTGCACAACCACGTCGCGTACTTCATCAACTTCTTCCTGAACGATACGAACACGGCACCGCTGAACTGGGCGACGGCGATGGAGTATCTGCTGTTCCGCGACGGGCTCATGTCGGGGACGGGCGTGTCGGCCGTGACGGCCAAGATCAGCTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCTGGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGTGCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAACGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACG-ACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACG-CCCGTCAAAGCGTGCCAGGATAA-GGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAANGTGACCTCGGGCAACACGAACGCACCGATCATCATGATCGCCGAGAANGGTGCCCATCTGATTCGCCGGGCGTGGGGCGC]
[+] EMBL BM601221 [CCGCGGACGCGTGGGCGGCATTGGACCGCGCGAACATCTGGAGAAGGTGGGCGTGCGTCCGATACACGATCTGCCGGGCGTGGGCAAGAACCTGCACAACCACGTCGCGTACTTCATCAACTTCTTCCTGAACGATACGAACACGGCACCGCTGAACTGGGCGACGGCGATGGAGTACCTGCTGTTCCGCGACGGGCTCATGTCGGGGACGGGCGTGTCGGCCGTGACGGCCAAGATCAGCTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCTGGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGTGCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAACGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACGAACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACGCCCCGTCAAAGCGTGCCAGGATAAGGGACTTTGGAAGTCAGGAAa ]
[+] EMBL BX626991 [ CCGATACACGATCTGCCGGGCGTGGGCAAGAACCTGCACAACCACGTCGCGTACTTCATCAACTTCTTCCTGAACGATACGAACACGGCACCGCTGAACTGGGCGACGGCGATGGAGTATCTGCTGTTCCGCGACGGGCTCATGTCGGGGACGGGCGTGTCGGCCGTGACGGCCAAGATCAGCTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCTGGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGTGCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAACGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACG ACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACG CCCGTCAAAGCGTGCCAGGATAA GGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAANGTGACCTCGGGCAACACGAACGCACCGATCATCATGA ]
[+] EMBL BX628308 [ nACACGGCACCGCTGAACTGGGCGACGGCGATGGAGTATCTGCTGTTCCGCGACGGGCTCATGTCGGGGACGGGCGTGTCGGCCGTGACGGCCAAGATCAGCTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCTGGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGTGCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAACGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACG ACGTGAAGGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGCGTACGGCATGGATCTGGACCGAACG CCCGTCAAAGCGTGCCAGGATAA GGACTTTGGAAGTCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGGTTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGTGCANGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAANGTGACCTCGGGCAACACGAACGCACCGATCATCATGATCGCCGAGAANGGTGCCCATCTGATTCGCCGGGCGTGGGGCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7824#0 ------------------------------------------------------------
consensus_7824#1 CCGCGGACGCGTGGGCGGCATTGGACCGCGCGAACATCTGGAGAAGGTGGGCGTGCGTCC 60
consensus_7824#0 ------------------------------------------------------------
consensus_7824#1 GATACACGATCTGCCGGGCGTGGGCAAGAACCTGCACAACCACGTCGCGTACTTCATCAA 120
consensus_7824#0 ------------------------------------------------------------
consensus_7824#1 CTTCTTCCTGAACGATACGAACACGGCACCGCTGAACTGGGCGACGGCGATGGAGTATCT 180
consensus_7824#0 --------------------------GAATCCCCGAGGTG-CAGTGACGGCCAAGATCAG 33
consensus_7824#1 GCTGTTCCGCGACGGGCTCATGTCGGGGACGGGCGTGTCGGCCGTGACGGCCAAGATCAG 240
* * ** * * * *****************
consensus_7824#0 CTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCT 93
consensus_7824#1 CTCGAAGTACGCGGAGCGACCGGATGATCCGGATCTGCAGTTCTACTTCGGCGGGTTCCT 300
************************************************************
consensus_7824#0 GGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGT 153
consensus_7824#1 GGCTGACTGTGCCAAGACGGGGCAGGTCGGTGAGCTGCTCAGCAACGATTCCCGCTCGGT 360
************************************************************
consensus_7824#0 GCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAA 213
consensus_7824#1 GCAGATCTTCCCGGCCGTGCTGCACCCGAAGAGCCGCGGGTACATTGAGCTGAAGTCGAA 420
************************************************************
consensus_7824#0 CGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACGACGTGAA 273
consensus_7824#1 CGACCCGCTGGAGCATCCGAAGATTGTCGTGAACTACCTGAAGGAGGATCACGACGTGAA 480
************************************************************
consensus_7824#0 GGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGC 333
consensus_7824#1 GGTGCTGGTGGAGGGCATCAAGTTTGCGGTGCGGCTCTCGGAAACGGACGCGCTGCAGGC 540
************************************************************
consensus_7824#0 GTACGGCATGGATCTGGACCGAACGCCCGTCAAAGCGTGCCAGGATAAGGACTTTGGAAG 393
consensus_7824#1 GTACGGCATGGATCTGGACCGAACGCCCGTCAAAGCGTGCCAGGATAAGGACTTTGGAAG 600
************************************************************
consensus_7824#0 TCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGG 453
consensus_7824#1 TCAGGAATACTGGGAGTGTGCCGTACGACAGAACACCGGTGCGGAGAACCATCAGGCCGG 660
************************************************************
consensus_7824#0 TTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGT 513
consensus_7824#1 TTCGTGCAAGATGGGCCCGACCAGTGACCCGCTGGCCGTGGTCGATCACGAGCTGCGTGT 720
************************************************************
consensus_7824#0 GCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAAGGTGACCTCGGG 573
consensus_7824#1 GCACGGCGTGCGGAATCTGCGAGTCGTCGACGCGTCCGTCATGCCGAANGTGACCTCGGG 780
************************************************ ***********
consensus_7824#0 CAACACGAACGCACCGATCATCATGATCGCCGAGAAGGGTGCCCATCTGATTCGCCGGGC 633
consensus_7824#1 CAACACGAACGCACCGATCATCATGATCGCCGAGAANGGTGCCCATCTGATTCGCCGGGC 840
************************************ ***********************
consensus_7824#0 GTGGGGCGCTCGCTAGAGCTAATTGGACCCCTCTCCTCCCCTGTCCATCTACCGTGTGGA 693
consensus_7824#1 GTGGGGCGC--------------------------------------------------- 849
*********
consensus_7824#0 CAGCACTTCTCCTAGCATTTACGAAATAGGGGACCGATTCATTTACCACCTAAGCTAATC 753
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 GCGTTTTTAGGCACACCTCTTCTGCCCCTTTGTATGTCCGTCCCGGGTGTGTTGCCACGT 813
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 GTCACGCGTCTTGTTCGAAGCGTTCGAGAGTTTGTTTTGTTTTGGAAAGTATTAGCTGCA 873
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 TCTTTACAAGAACAAAAAGTGACGGTTTGTTTCTGGCACTCGCTCTACCTCGAATGGCAA 933
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 ATGAATTCATTCCGCTTCCGGCACCGTTCACGTACGCCCGCGTTTGCTTCTATCAAACAC 993
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 GGGCGGTTTGCGTGCGCGTGTCACAACGGCTCAAGACAAATCGGCACACATTTCTCCCCT 1053
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 CTTCCTCTGAAAAAAAAACACTCCCTGGCGTGGCAAACCAGGCATGTCCCGCTCAAATTG 1113
consensus_7824#1 ------------------------------------------------------------
consensus_7824#0 TGTTAATGTAAAGTTAAATTATGAATATCAATAAAGATTA 1153
consensus_7824#1 ----------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||