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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_789#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 755 fasta sequence
[CCGCCCACGCGTACGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGAGGAGTAAAAATTATTATACCGCAAGCGTTCATTGTGTGCTCCCGATGGGCGCAAGTTTAGAGCTAAAAAGCCATTGCTTAATAGTAGTAGAAGTTTAAACTGATGCCTGCTCACTGATTCGCTTGTTGTAATAAATAGCCAGCGATTTAAGTTTCGGTGTGCATTGATTTTAAATCGTTAGCTTGGCTTGAAAATAGACACTCTTTGTAACGATACGAAAGCTATACGATGCGTGTGAGCATGTTTCGAACGTTATTGGGCGATCGCCCCTTAAATATGCACAATTTTTGAAACAATTGTTCTTTCGGCATGCGTAATTAAATAATACAAATCCTCCGACCCCCACCCAATAGAGAACTCCCAAAAAAAAAACCCGGTTACCCCAACCAGCACCGGGGAGTGGAGTGTGCCTCCGCAAAATTTACAATCCTTATAAAAGCGGCCAGTGGAATTCAAAAAAAAAATCCCGGGCCCGGAAAAACCCCAAAAAATTTTTCCGGGGCACCAACAAATTATTTTCCGGGTCCAACCCCTGGGGGGCTTTCAAAAAAACAATTTTTTAGGCGGCCAATAAAAAACCCACAAACTTTTTGGAAAACCTTTACGTTTTGAACCCCAAAAAAACGGTGACACTTGGGGGGGGGGTTTTTAAAGGGGCGGCCCAAACCTTTTTGGGGGGGAAATGGCCCATTGGGGGGGAT]
[+] EMBL BM617817 [CCGCCCACGCGTACGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGAGGAGTAAAAATTATTATACCGCAAGCGTTCATTGTGTGCTCCCGATGGGCGCAAGTTTAGAGCTAAAAAGCCATTGCTTAATAGTAGTAGAAGTTTAAACTGATGCCTGCTCACTGATTCGCTTGTTGTAATAAATAGCCAGCGATTTAAGTTTCGGTGTGCATTGATTTTAAATCGTTAGCTTGGCTTGAAAATAGACACTCTTTGTAACGATACGAAAGCTATACGATGCGTGTGAGCATGTTTCGAACGTTATTGGGCGATCGCCCCTTAAATATGCACAATTTTTGAAACAATTGTTCTTTCGGCATGCGTAATTAAATAATACAAATCCTCCGACCCCCACCCAATAGAGAACTCCCAAAAAAAAAACCCGGTTACCCCAACCAGCACCGGGGAGTGGAGTGTGCCTCCGCAAAATTTACAATCCTTATAAAAGCGGCCAGTGGAATTCAAAAAAAAAATCCCGGGCCCGGAAAAACCCCAAAAAATTTTTCCGGGGCACCAACAAATTATTTTCCGGGTCCAACCCCTGGGGGGCTTTCAAAAAAACAATTTTTTAGGCGGCCAATAAAAAACCCACAAACTTTTTGGAAAACCTTTACGTTTTGAACCCCAAAAAAACGGTGACACTTGGGGGGGGGGTTTTTAAAGGGGCGGCCCAAACCTTTTTGGGGGGGAAATGGCCCATTGGGGGGGAT]
consensusID : consensus_789#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 606 fasta sequence
[AGCAGATCGGCCCGAGGATNGTAAACTAAAAATACAAAACANANTCAATGTTTCAACAAACAAAAACAAACAAATGCAACGATTGTGAGGCCGTTAAATGAAATGCTGCTTTTTAAGCGGCTAAATGGAAAAGTAATAAGCACAAAATACAAAACATAGTAATAGTAATCTACCTTTTTGGGAGAGGAGGAGTAAAAATTATTATACCGCAAGCGTTCATTGTGTGCTCCCGATGGGCGCAAGTTTAGAGCTAAAAAGCCATTGCTTAATAGTAGTAGAAGTTTAAACTGATGCCTGCTCACTGATTCGCTTGTTGTAATAAATAGCCAGCGATTTAAGTTTCGGTGTGCATTGATTTTAAATCGTTAGCTTGGCTTGAAAATAGACACTCTTTGTAACGATACGAAAGCTATACGATGCGTGTGAGCATGTTTCGAACGTTATTGGGCGATCGCCCCTTAAATATGCACAATTTCTGAAACAATTGTTCTTCGGCATGCGTAATTNAATAATACAAATCACTCCGACACACACCAATAGAGAACTCCGAAAGAAGAAAGACCAGTTAAGCAAACGAGCACCGTGAGTGAGTGTGCTCAGCAGAAT]
[+] EMBL BX466305 [AGCAGATCGGCCCGAGGATNGTAAACTAAAAATACAAAACANANTCAATGTTTCAACAAACAAAAACAAACAAATGCAACGATTGTGAGGCCGTTAAATGAAATGCTGCTTTTTAAGCGGCTAAATGGAAAAGTAATAAGCACAAAATACAAAACATAGTAATAGTAATCTACCTTTTTGGGAGAGGAGGAGTAAAAATTATTATACCGCAAGCGTTCATTGTGTGCTCCCGATGGGCGCAAGTTTAGAGCTAAAAAGCCATTGCTTAATAGTAGTAGAAGTTTAAACTGATGCCTGCTCACTGATTCGCTTGTTGTAATAAATAGCCAGCGATTTAAGTTTCGGTGTGCATTGATTTTAAATCGTTAGCTTGGCTTGAAAATAGACACTCTTTGTAACGATACGAAAGCTATACGATGCGTGTGAGCATGTTTCGAACGTTATTGGGCGATCGCCCCTTAAATATGCACAATTTCTGAAACAATTGTTCTTCGGCATGCGTAATTNAATAATACAAATCACTCCGACACACACCAATAGAGAACTCCGAAAGAAGAAAGACCAGTTAAGCAAACGAGCACCGTGAGTGAGTGTGCTCAGCAGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_789#0 ------------------------------------------------------------
consensus_789#1 AGCAGATCGGCCCGAGGATNGTAAACTAAAAATACAAAACANANTCAATGTTTCAACAAA 60
consensus_789#0 ------------------------------------------------------------
consensus_789#1 CAAAAACAAACAAATGCAACGATTGTGAGGCCGTTAAATGAAATGCTGCTTTTTAAGCGG 120
consensus_789#0 -------------CCGCCCACGCGTACGCCCACGCGTCCGCCCACGCGTCCGCCCACGCG 47
consensus_789#1 CTAAATGGAAAAGTAATAAGCACAAAATACAAAACATAGTAATAGTAATCTACCTTTTTG 180
* * * * * * * * ** ** *
consensus_789#0 TCCG-GGAGGAGTAAAAATTATTATACCGCAAGCGTTCATTGTGTGCTCCCGATGGGCGC 106
consensus_789#1 GGAGAGGAGGAGTAAAAATTATTATACCGCAAGCGTTCATTGTGTGCTCCCGATGGGCGC 240
* *******************************************************
consensus_789#0 AAGTTTAGAGCTAAAAAGCCATTGCTTAATAGTAGTAGAAGTTTAAACTGATGCCTGCTC 166
consensus_789#1 AAGTTTAGAGCTAAAAAGCCATTGCTTAATAGTAGTAGAAGTTTAAACTGATGCCTGCTC 300
************************************************************
consensus_789#0 ACTGATTCGCTTGTTGTAATAAATAGCCAGCGATTTAAGTTTCGGTGTGCATTGATTTTA 226
consensus_789#1 ACTGATTCGCTTGTTGTAATAAATAGCCAGCGATTTAAGTTTCGGTGTGCATTGATTTTA 360
************************************************************
consensus_789#0 AATCGTTAGCTTGGCTTGAAAATAGACACTCTTTGTAACGATACGAAAGCTATACGATGC 286
consensus_789#1 AATCGTTAGCTTGGCTTGAAAATAGACACTCTTTGTAACGATACGAAAGCTATACGATGC 420
************************************************************
consensus_789#0 GTGTGAGCATGTTTCGAACGTTATTGGGCGATCGCCCCTTAAATATGCACAATTTTTGAA 346
consensus_789#1 GTGTGAGCATGTTTCGAACGTTATTGGGCGATCGCCCCTTAAATATGCACAATTTCTGAA 480
******************************************************* ****
consensus_789#0 ACAATTGTTCTTTCGGCATGCGTAATTAAATAATACAAATC-CTCCGACCCCCACCCAAT 405
consensus_789#1 ACAATTGTTCTT-CGGCATGCGTAATTNAATAATACAAATCACTCCGACACACACC-AAT 538
************ ************** ************* ******* * **** ***
consensus_789#0 AGAGAACTCCCAAAAAAAAAAC-CCGGTTACCCCAACCAGCACCGGGGAGTGGAGTGTGC 464
consensus_789#1 AGAGAACTCCGAAAGAAGAAAGACCAGTTAAGCAAACGAGCACCGTG-AGTG-AGTGTGC 596
********** *** ** *** ** **** * *** ******* * **** *******
consensus_789#0 CTCCGCAAAATTTACAATCCTTATAAAAGCGGCCAGTGGAATTCAAAAAAAAAATCCCGG 524
consensus_789#1 -TCAGCAGAAT------------------------------------------------- 606
** *** ***
consensus_789#0 GCCCGGAAAAACCCCAAAAAATTTTTCCGGGGCACCAACAAATTATTTTCCGGGTCCAAC 584
consensus_789#1 ------------------------------------------------------------
consensus_789#0 CCCTGGGGGGCTTTCAAAAAAACAATTTTTTAGGCGGCCAATAAAAAACCCACAAACTTT 644
consensus_789#1 ------------------------------------------------------------
consensus_789#0 TTGGAAAACCTTTACGTTTTGAACCCCAAAAAAACGGTGACACTTGGGGGGGGGGTTTTT 704
consensus_789#1 ------------------------------------------------------------
consensus_789#0 AAAGGGGCGGCCCAAACCTTTTTGGGGGGGAAATGGCCCATTGGGGGGGAT 755
consensus_789#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||