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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7899#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1509 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGTACACTTTCGATTTGAGCAGCTTGGCTGGTGTTTGAAAATGTTTCCATATTACTCAGCACAGTACGAATAAAGCGTAATTCATCGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGCCTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACTGGAACATTGTTGTTGCGGGACCAAAACAAAAGTGCTGAACATCATTTAAAAAGTATCCACAACATCACAGCACAGCGCGTTGGAATACTTAACTAAAACCATGGCTCAGATGGAAAAGTCCCTACAGTCGGCTTCGACGGTGGAGGAGGAGGAAGACTATGGTCCACTGCTGATCGGAAAGCTGGAGGGCAATGGCATCACAAACGGGGACATTAAAAAGCTTGCCGAAGCCGGCTTTCACACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTCGGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTACAACGGCCACCGAGTATCACCAGAAGCGGTCGGAAATCATTCAGCTCACTACCGGGTCGAAAGAGCTGGACAAACTGCTCGGCGGTGGTATCGAAACTGGCAGCATTACGGAAATATTCGGCGAGTTTCGTACCGGCAAGACGCAGCTGTGCCACACGCTCGCCGTAACCTGCCAGCTGCCGGTCAGTCAGAACGGTGGCGAGGGCAAATGTTTGTACATCGATACGGAGGGCACGTTTCGTCCGGAGCGGCTGCTTGCTACGGCCGAGCGCTACAAGCTGGTCGGGGCGGGCGTGCTGGACAATGTGGCGTACGCGAGAGCGTACAACACCGACCACCAGATGCATCTGCTGATGGTAGCGTCGGCTATGATGGCGGAATCGCGCTACGCGCTCATTATAGTGGACAGTGCGACCAGTCTGTACCGGACCGATTACAGTGGGCGGGGCGAGCTGGCGGCTCGGCAAACGCATTTGGCCAAGTTTCTGCGCATGCTGCTGCGGCTGGCGGACGAGTTCGGGGTGGCGGTGCTGATCACGAACCAGGTCGTGGCGCAGGTGGACGGTGCGGCCATGTTCAATCCGGATCCGAAGAAACCGATCGGTGGAAACATCATAGCGCACGCGTCTACCACCCGCCTGTACATGCGGAAGGGTCGGGGCGAATCGAGAATCTGTAAAATCTACGACTCACCGTGTCTGGCGGAGGGCGAAGCCACGTTCGCGATCAATCCGGACGGAATAGGGGATGTGAAGGAGTGAGCGGCCGTACTGATCGTCTTTGCCGGTGTGGAGCAAAGGGGCGATTCGGGGGAGCGCAGCAAAAGGAGTGGGATATTTTTAGATAGGAAAGCACATCCAATTACTTGTTACACTTCGATAAATGTAATACATAACGACACA-TTTTTTTACCAAAAAAAA]
[+] EMBL BM623346 [CCGCCCACGCGTCCGCCCACGCGTCCGTACACTTTCGATTTGAGCAGCTTGGCTGGTGTTTGAAAATGTTTCCATATTACTCAGCACAGTACGAATAAAGCGTAATTCATCGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGCCTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACTGGAACATTGTTGTTGCGGGACCAAAACAAAAGTGCTGAACATCATTTAAAAAGTATCCACAACATCACAGCACAGCGCGTTGGAATACTTAACTAAAACCATGGCTCAGATGGAAAAGTCCCTACAGTCGGCTTCGACGGTGGAGGAGGAGGAAGACTATGGTCCACTGCTGATCGGAAAGCTGGAGGGCAATGGCATCACAAACGGGGACATTAAAAAGCTTGCCGAAGCCGGCTTTCACACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTCGGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTACAACGGCCACCGAGTATCACCAGAAGCGGTCGGAAATCATTCAGCTCACTACCGGGTCGAAAGAGCTGGACAAACTGCTCGGCGGTGGTATCGAAACTGGCAGCAT ]
[+] EMBL AGA285179 [ AAAAAGCTTGCCGAAGCCGGCTTTCACACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTCGGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTACAACGGCCACCGAGTATCACCAGAAGCGGTCGGAAATCATTCAGCTCACTACCGGGTCGAAAGAGCTGGACAAACTGCTCGGCGGTGGTATCGAAACTGGCAGCATTACGGAAATATTCGGCGAGTTTCGTACCGGCAAGACGCAGCTGTGCCACACGCTCGCCGTAACCTGCCAGCTGCCGGTCAGTCAGAACGGTGGCGAGGGCAAATGTTTGTACATCGATACGGAGGGCACGTTTCGTCCGGAGCGGCTGCTTGCTACGGCCGAGCGCTACAAGCTGGTCGGGGCGGGCGTGCTGGACAA ]
[+] EMBL BX607547 [ GAGTTTCGTACCGGCAAGACGCAGCTGTGCCACACGCTCGCCGTAACCTGCCAGCTGCCGGTCAGTCAGAACGGTGGCGAGGGCAAATGTTTGTACATCGATACGGAGGGCACGTTTCGACCGGAGCGGCTGCTTGCTACGGCCGAGCGCTACAAGCTGGTCGGCGCGGACGTGCTGGACAATGTGGCGTACGCGAGAGCGTACAACACCGACCACCAGATGCATCTGCTGATGGTAGCGTCGGCTATGATGGCGGAATCGCGCTACGCGCTCATTATAGTGGACAGTGCGACCAGTCTGTACCGGACCGATTACAGTGGGCGGGGCGAGCTGGCGGCTCGGCAAACGCATTTGGCCAAGTTTCTGCGCATGCTGCTGCGGCTGGCGGACGAGTTCGGGGTGGCGGTGCTGATCACGAACCAGGTCGTGGCGCAGGTGGACGGTGCGGCCATGTTCAATCCGGATCCGAAGAAACCGATCGGTGGAAACATCATAGCGCACGCGTCTACCACCCGCCTGTACATGCGGAAGGGTCGGGGCGAATCGAGAATCTGTAAAATCTACGACTCACCGTGTCTGGCGGAGGGCGAAGCCACGTTCGCGATCAATCCGGAC ]
[+] EMBL AGA281846 [ CTGGCGGCTCGGCAAACGCATTTGGCCAAGTTTCTGCGCATGCTGCTGCGGCTGGCGGACGAGTTCGGGGTGGCGGTGCTGATCACGAACCAGGTCGTGGCGCAGGTGGACGGTGCGGCCATGTTCAATCCGGATCCGAAGAAACCGATCGGTGGAAACATCATAGCGCACGCGTCTACCACCCGCCTGTACATGCGGAAGGGTCGGGGCGAATCGAGAATCTGTAAAATCTACGACTCACCGTGTCTGGCGGAGGGC ]
[-] EMBL AGA280146 [ CATGTTCAATCCGAATCCGAAGAAACCAATCGGTGGAAACATCATAGCGCACGCGTNTACCACCCGCCTGTACATGCGGAAGGGTCGGGGCGAATCGAGAATCTGTAAAATCTACGACTCACCGTGTCTGGCGGAGGGCGAAGCCACGTTCGCGATCAATCCGGACGGAATAGGGGATGTGAAGGAGTGAGCGGCCGTACTGATCGTCTTTGCCGGTGTGGAGCAAAGGGGCGATTCGGGGGAGCGCAGCAAAAGGAGTGGGATATTTTTAGATAGGAAAGCACATCCAATTACTTGTTACACTTCGATAAATGTAATACATAACGACACATTTTTTTTACCAAAAAAAA]
[-] EMBL AGA283885 [ CCGGATCCGAAGAAACCGATCGGTGGAAACATCATAGCGCACGCGTCTACCACCCGCCTGTACATGCGGAAGGGTCGGGGCGAATCGAGAATCTGTAAAATCTACGACTCACCGTGCCTGGCGGAGGGNGAAGCCACGTTCGCGATCAATCCGGACGGAATAGGGGATGTGAAGGAGTGAGCGGCCGTACTGATCGTCTTTGCCGGTGTGGAGCAAAGGGGCGATTCGGGGGAGCGCAGCAAAAGGAGTGGGATATTTTTAGATAGGAAAGCACATCCAATTACTTGTTACACTTCGATAAATGTAATACATAACGACACA TTTTTTTACCAAAAAAAA]
consensusID : consensus_7899#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 604 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGTAAAAACATGTACACTTTCGATTTGAGCAGCTTGGCTGGTGTTTGATAATGTTTCCATATTACTCAGCGCAGTACGAATAAAGCGTAATTTATCGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGCCTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACTAGAACATTGTTGTTGCGGGACCAAAACAAAAGTGCTGAACATCATTTAAAAAGTATCCACAACATCACAGCACAGCGCGTTGGAATACTTAACTAAAAGCATGGCTCAGATGGAAAAGTCCCTACAGTCGGCTTCGACGGTGGAGGAGGAGGAAGACTATGGTCCACTGCTGATCGGAAAGCTGGAGGGCAATGGCATCACAAACGGGGACATTAAAAAGCTTGCCGAAGCCGGCTTTCACACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTCGGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTACAACG]
[+] EMBL BM607959 [CCGCGGACGCGTGGGCGGACGCGTGGGTAAAAACATGTACACTTTCGATTTGAGCAGCTTGGCTGGTGTTTGATAATGTTTCCATATTACTCAGCGCAGTACGAATAAAGCGTAATTTATCGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGCCTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACTAGAACATTGTTGTTGCGGGACCAAAACAAAAGTGCTGAACATCATTTAAAAAGTATCCACAACATCACAGCACAGCGCGTTGGAATACTTAACTAAAAGCATGGCTCAGATGGAAAAGTCCCTACAGTCGGCTTCGACGGTGGAGGAGGAGGAAGACTATGGTCCACTGCTGATCGGAAAGCTGGAGGGCAATGGCATCACAAACGGGGACATTAAAAAGCTTGCCGAAGCCGGCTTTCACACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTCGGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTACAACG]
[+] EMBL BM602066 [CCGCGGACGCGTGGGCGGACGCGTGGGTAAAAACATGTACACTTTCGATTTGATCAGCTTGGCTGGTGTTTGATAATGTTTCCATATTACTCAGCGCAGTACGAATAAAGCGTAATTTATCGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGCCTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACTAGAACATTGTTGTTGCGGGA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7899#0 CCGCCCACGCGTCCGCCCACGCGTC----------CGTACACTTTCGATTTGAGCAGCTT 50
consensus_7899#1 CCGCGGACGCGTGGGCGGACGCGTGGGTAAAAACATGTACACTTTCGATTTGAGCAGCTT 60
**** ****** ** ****** ************************
consensus_7899#0 GGCTGGTGTTTGAAAATGTTTCCATATTACTCAGCACAGTACGAATAAAGCGTAATTCAT 110
consensus_7899#1 GGCTGGTGTTTGATAATGTTTCCATATTACTCAGCGCAGTACGAATAAAGCGTAATTTAT 120
************* ********************* ********************* **
consensus_7899#0 CGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGC 170
consensus_7899#1 CGCAAGATTTCTAAGAAGTGTTTCAATTTTGGAAGATTCGTGTGCCTGTGGACTGTGTGC 180
************************************************************
consensus_7899#0 CTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACT 230
consensus_7899#1 CTGTTCGCACAAGATTAGCAAGTGTCAAAGCGCCGACGTAATAAAGTGCGCCAAATCACT 240
************************************************************
consensus_7899#0 GGAACATTGTTGTTGCGGGACCAAAACAAAAGTGCTGAACATCATTTAAAAAGTATCCAC 290
consensus_7899#1 AGAACATTGTTGTTGCGGGACCAAAACAAAAGTGCTGAACATCATTTAAAAAGTATCCAC 300
***********************************************************
consensus_7899#0 AACATCACAGCACAGCGCGTTGGAATACTTAACTAAAACCATGGCTCAGATGGAAAAGTC 350
consensus_7899#1 AACATCACAGCACAGCGCGTTGGAATACTTAACTAAAAGCATGGCTCAGATGGAAAAGTC 360
************************************** *********************
consensus_7899#0 CCTACAGTCGGCTTCGACGGTGGAGGAGGAGGAAGACTATGGTCCACTGCTGATCGGAAA 410
consensus_7899#1 CCTACAGTCGGCTTCGACGGTGGAGGAGGAGGAAGACTATGGTCCACTGCTGATCGGAAA 420
************************************************************
consensus_7899#0 GCTGGAGGGCAATGGCATCACAAACGGGGACATTAAAAAGCTTGCCGAAGCCGGCTTTCA 470
consensus_7899#1 GCTGGAGGGCAATGGCATCACAAACGGGGACATTAAAAAGCTTGCCGAAGCCGGCTTTCA 480
************************************************************
consensus_7899#0 CACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTC 530
consensus_7899#1 CACGGTCGAAGCGGTAGCGTATGCGCCCAAAAAGCAGCTGCTCGCAATCAAAGGCATCTC 540
************************************************************
consensus_7899#0 GGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTAC 590
consensus_7899#1 GGAGGCGAAGGCGGATAAAATTCTCCAGGAAGCGACGAAACACGTCCCGATGGGCTTTAC 600
************************************************************
consensus_7899#0 AACGGCCACCGAGTATCACCAGAAGCGGTCGGAAATCATTCAGCTCACTACCGGGTCGAA 650
consensus_7899#1 AACG-------------------------------------------------------- 604
****
consensus_7899#0 AGAGCTGGACAAACTGCTCGGCGGTGGTATCGAAACTGGCAGCATTACGGAAATATTCGG 710
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 CGAGTTTCGTACCGGCAAGACGCAGCTGTGCCACACGCTCGCCGTAACCTGCCAGCTGCC 770
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 GGTCAGTCAGAACGGTGGCGAGGGCAAATGTTTGTACATCGATACGGAGGGCACGTTTCG 830
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 TCCGGAGCGGCTGCTTGCTACGGCCGAGCGCTACAAGCTGGTCGGGGCGGGCGTGCTGGA 890
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 CAATGTGGCGTACGCGAGAGCGTACAACACCGACCACCAGATGCATCTGCTGATGGTAGC 950
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 GTCGGCTATGATGGCGGAATCGCGCTACGCGCTCATTATAGTGGACAGTGCGACCAGTCT 1010
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 GTACCGGACCGATTACAGTGGGCGGGGCGAGCTGGCGGCTCGGCAAACGCATTTGGCCAA 1070
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 GTTTCTGCGCATGCTGCTGCGGCTGGCGGACGAGTTCGGGGTGGCGGTGCTGATCACGAA 1130
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 CCAGGTCGTGGCGCAGGTGGACGGTGCGGCCATGTTCAATCCGGATCCGAAGAAACCGAT 1190
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 CGGTGGAAACATCATAGCGCACGCGTCTACCACCCGCCTGTACATGCGGAAGGGTCGGGG 1250
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 CGAATCGAGAATCTGTAAAATCTACGACTCACCGTGTCTGGCGGAGGGCGAAGCCACGTT 1310
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 CGCGATCAATCCGGACGGAATAGGGGATGTGAAGGAGTGAGCGGCCGTACTGATCGTCTT 1370
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 TGCCGGTGTGGAGCAAAGGGGCGATTCGGGGGAGCGCAGCAAAAGGAGTGGGATATTTTT 1430
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 AGATAGGAAAGCACATCCAATTACTTGTTACACTTCGATAAATGTAATACATAACGACAC 1490
consensus_7899#1 ------------------------------------------------------------
consensus_7899#0 ATTTTTTTACCAAAAAAAA 1509
consensus_7899#1 -------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||