cluster # 7903

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Anopheles gambiae
cluster # 7903 cluster # 7903 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7903#0 length = 760 sequences # 6

consensus_7903#1 length = 549 sequences # 1
consensus_7903#2 length = 236 sequences # 1

consensusID : consensus_7903#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 760
fasta sequence

                              [CCGCTGCGTTTTCCAATTTTGAGTCACTTTGTGTAGCGTTTGTTCGCCAATTGTAAAAGGAAAGGTACATAGTTGGTAATTGTAATCACGCGCCAGTCTACGCCAGTGCCGGAGTAATGCCGTCCGTCTATCTGGGTGTGCATTTGCCGTTCAAACCGTACCAAAAGCTAAAGGTGGATAATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAGAACGATGTTGCCGCAGATGATTTCGAATTGCTGTACTGTGGCTGCTTGCTGAAAACGGACGACATCCTGCAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGTCGCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGACCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCCAGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGCGCAATCTGTTCGTGCTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCACGCACGATTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCATCTGTCCGCACCGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTC]

[+] EMBL BM652348             [CCGCTGCGTTTTCCAATTTTGAGTCACTTTGTGTAGCGTTTGTTCGCCAATTGTAAAAGGAAAGGTACATAGTTGGTAATTGTAATCACGCGCCAGTCTACGCCAGTGCCGGAGTAATGCCGTCCGTCTATCTGGGTGTGCATTTGCCGTTCAAACCGTACCAAAAGCTAAAGGTGGATAATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAGAACGATGTTGCCGCAGATGATTTCGAATTGCTGTACTGTGGCAGCTTGCTGAAAACGGACGACATCCTGCAAAACAAAGGCGTTAGCGATGGTTCAATGATACACGTCATACAGAAGCGTCGCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGACCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCCAGAAGGCAAGACAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGCGCAATCTGTTCGTACTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCG                                                                                                                                                ]
[+] EMBL BM597651             [                   ccgGTCACTTTGTGTAGCGTTTGTACGCCAATTGTAAAAGGAAAGGTACATAGTTGGTAATTGTAATCACGCGCCAGTCTACGCCAGTGCCGGAGTAATGCCGTCCGTCTATCTGGGTGTGCATTTGCCGTTAAAACCGTACCAAAAGCTAAAGGTGGATAATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAGAACGATGTTGCCGCAGATGATTTCGAATTGCTGTACTGTGGCTGCTTGCTGAAAACGGACGACATCCTGCAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGTCGCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGACCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCCAGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGCGCAATCTGTTCGTGCTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCACGCACGATTGTGCAGCTGCTCAACTCCAAGA                                                                            ]
[+] EMBL BX603106             [                                                                GTACATAGTTGGTAATTGTAATCACGCGCCAGTCTACGCCAGTGCCGGAGTAATGCCGTCCGTCTATCTGGGTGTGCATTTGCCGTTAAAACCGTACCAAAAGCTAAAGGTGGATAATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAGAACGATGTTGCCGCAGATGATTTCGAATTGCTGTACTGTGGCTGCTTGCTGAAAACGGACGACATCCTGCAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGTCGCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGACCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCCAGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGCGCAATCTGTTCGTGCTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAA                                                                                                                                                           ]
[+] EMBL BM607316             [                                                                                                ccgACGCCAGTGCCGGAGTAATGCCGTCCGTCTATCTGGGTGTGCATTTGCCGTTCAAACCGTACCAAAAGCTAAAGGTGGATAATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAGAACGATGTTGCTGCAGATGATTTCGAATTGCTGTACTGTGGCTGCTTGCTGAAAACGGACGACATCCTGAAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGTCGCGAAAAAGATCCATCGACTGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGACCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCCAGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGCGCAATCTGTTCGTACTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCGCGCACGATTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCATCTGTCCGCACCGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTC]
[+] EMBL BX611468             [                                                                                                                                                                                                                                                                                TACTGTGGCTGCTTGCTGAAAACGGACGACATCCTGCAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGTCGCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGACCGAAGCCGAAGTTCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCCAGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGCGCAATCTGTTCGTGCTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCACGCACGATTGTGCAGCTGCTCAACTCCAAGATGATC                                                                       ]
[+] EMBL CNS09LB5             [                                                                                                                                                                                                                                                                                                                                                                                GAACCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCAGACCGAAGCCGAAGTGCAGGAAGTACAGTCCGAATGGCGCACGGACGAATCGTCCAACATCCAGAAGGCAAGG                                                                                                                                                                                                                                                                             ]




>consensus_7903#0
CCGCTGCGTTTTCCAATTTTGAGTCACTTTGTGTAGCGTTTGTTCGCCAATTGTAAAAGG
AAAGGTACATAGTTGGTAATTGTAATCACGCGCCAGTCTACGCCAGTGCCGGAGTAATGC
CGTCCGTCTATCTGGGTGTGCATTTGCCGTTCAAACCGTACCAAAAGCTAAAGGTGGATA
ATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAGA
ACGATGTTGCCGCAGATGATTTCGAATTGCTGTACTGTGGCTGCTTGCTGAAAACGGACG
ACATCCTGCAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGTC
GCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGAGCTGA
CCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTTCC
AGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCGGC
GCAATCTGTTCGTGCTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGC
CGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCACGCACGA
TTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCATCTGTCCGCAC
CGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTC

consensusID : consensus_7903#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence

                              [CCGCCAGAAGGCAATCTGTTCGTACTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCGCGCACGATTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCATCTGTCCGCACCGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTCGTCAAGCGACGAAAACACTGCCTCGCCGACGACCTCGACCGCTCCCAACACAATCCGCCGCATCACGGCCGACAATCTGGCGTCCGCGCTTGCTTTCGCGGGCTCGCGCAGCTCGTACAACTCGCTGTCCAACATCTCCCAGCGCGATGCGGACAGCCGTGCTAATCAGCCGGAACCGACTGGCGAAGGGTCAGCTGGAACCGGCACGTCTGTCGCCGCCAACCTGCCCTCCACCTCAGCTGCTGCCGGCAGCAATCAACCGACCACTTCCTCGAATGCTGCCGCCGGACGCATCACGTCCTCGATGTTGCTCGACGCG]

[+] EMBL BM637133             [CCGCCAGAAGGCAATCTGTTCGTACTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCGCGCACGATTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCATCTGTCCGCACCGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTCGTCAAGCGACGAAAACACTGCCTCGCCGACGACCTCGACCGCTCCCAACACAATCCGCCGCATCACGGCCGACAATCTGGCGTCCGCGCTTGCTTTCGCGGGCTCGCGCAGCTCGTACAACTCGCTGTCCAACATCTCCCAGCGCGATGCGGACAGCCGTGCTAATCAGCCGGAACCGACTGGCGAAGGGTCAGCTGGAACCGGCACGTCTGTCGCCGCCAACCTGCCCTCCACCTCAGCTGCTGCCGGCAGCAATCAACCGACCACTTCCTCGAATGCTGCCGCCGGACGCATCACGTCCTCGATGTTGCTCGACGCG]




>consensus_7903#1
CCGCCAGAAGGCAATCTGTTCGTACTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCG
ATGCAGCAGCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCA
TCGCGCACGATTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCAT
CTGTCCGCACCGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTCGTCAAGCGAC
GAAAACACTGCCTCGCCGACGACCTCGACCGCTCCCAACACAATCCGCCGCATCACGGCC
GACAATCTGGCGTCCGCGCTTGCTTTCGCGGGCTCGCGCAGCTCGTACAACTCGCTGTCC
AACATCTCCCAGCGCGATGCGGACAGCCGTGCTAATCAGCCGGAACCGACTGGCGAAGGG
TCAGCTGGAACCGGCACGTCTGTCGCCGCCAACCTGCCCTCCACCTCAGCTGCTGCCGGC
AGCAATCAACCGACCACTTCCTCGAATGCTGCCGCCGGACGCATCACGTCCTCGATGTTG
CTCGACGCG

consensusID : consensus_7903#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence

                              [GGAGGAGCAGGGCACGAGTCCATCGGCACAACCACAGACGGAACGCGTTGGCACGAAACGGCACCACCGCAGCCGGCGGGGGAACCACCAGAACCGGAAGCCTGCCGCACAAACAACAACGAGAACGCGTCGAGCAACAACGAGGACGTGATGCGTCCGGCGGCAGCAATCGAGGAAGGGGACGGCAGAATGCCGCCGGCAGCAGCTGAGGGGGAGGGCAGGTTGGCGGCGACGGA]

[+] EMBL CNS09LB6             [GGAGGAGCAGGGCACGAGTCCATCGGCACAACCACAGACGGAACGCGTTGGCACGAAACGGCACCACCGCAGCCGGCGGGGGAACCACCAGAACCGGAAGCCTGCCGCACAAACAACAACGAGAACGCGTCGAGCAACAACGAGGACGTGATGCGTCCGGCGGCAGCAATCGAGGAAGGGGACGGCAGAATGCCGCCGGCAGCAGCTGAGGGGGAGGGCAGGTTGGCGGCGACGGA]




>consensus_7903#2
GGAGGAGCAGGGCACGAGTCCATCGGCACAACCACAGACGGAACGCGTTGGCACGAAACG
GCACCACCGCAGCCGGCGGGGGAACCACCAGAACCGGAAGCCTGCCGCACAAACAACAAC
GAGAACGCGTCGAGCAACAACGAGGACGTGATGCGTCCGGCGGCAGCAATCGAGGAAGGG
GACGGCAGAATGCCGCCGGCAGCAGCTGAGGGGGAGGGCAGGTTGGCGGCGACGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7903#0      CCGCTGCGTTTTCCAATTTTGAGTCACTTTGTGTAGCGTTTGTTCGCCAATTGTAAAAGG 60
consensus_7903#1      ------------------------------------------------------------
consensus_7903#2      ------------------------------------------------------------
                                                                                  

consensus_7903#0      AAAGGTACATAGTTGGTAATTGTAATCACGCGCCAGTCTACGCCAGTGCCGGAGTAATGC 120
consensus_7903#1      ------------------------------------------------------------
consensus_7903#2      ------------------------------------------------------------
                                                                                  

consensus_7903#0      CGTCCGTCTATCTGGGTGTGCATTTGCCGTTCAAACCGTACCAAAAGCTAAAGGTG-GAT 179
consensus_7903#1      -------CCGCCAGAAGGCAATCTGTTCGTACTGTCCTTGCTGAAGGATCCAATTCTGCT 53
consensus_7903#2      ------------------------------------------GGAGGAGCAGGGCACGAG 18
                                                                  * *          *  

consensus_7903#0      AATGTCGATCTAGCCAGCCCAACAGAGGCGCTTCGGTCGGAAGCAGCCAAACTGATGCAG 239
consensus_7903#1      GTCCTCGATGCAGC-AGC----CGGAAATGGTTCGGCGCGTAGCCCCCAAGC-------A 101
consensus_7903#2      TCCATCGGCACAACCACA--GACGGAA-CGCGTTGGCACGAAACGGCACCAC-------- 67
                          ***    * * *      * **   *  * **   * * *  *    *        

consensus_7903#0      AACGATGTTGCCGCAGATGATTTCGAATTGCTGTACTGTGGCTGCTTGCTGAAAACGGAC 299
consensus_7903#1      TCCGATACTGGTCGAGGC-ATCGCGCACGATTGT---GCAGCTGCTCAACTCCAA--GAT 155
consensus_7903#2      --CGCAGCCGGCGGGGGAACCACCAGA--ACCGGAAGCCTGCCGCACAAACAACAACGAG 123
                        **     *     *       *  *     *       ** **         *  ** 

consensus_7903#0      GACATCCTGCAAAACAAAGGCGTCAGCGATGGTTCAATGATACACGTCATACAGAAGCGT 359
consensus_7903#1      GATCTCC--------AAGGTGGCCAACTG----TCATCTGTCCGCACCGCTCGACAGCGC 203
consensus_7903#2      AACGCGT---------CGAGCAACAACGA-----GGACGTGATGCGTCCGGCGGCAGCAA 169
                       *                     ** *                 *  *   *   ***  

consensus_7903#0      CGCGAAAAAGATCCATCGACCGAGCAGCAGCAGCAGCCGCAACCGGAGGACCGAGA-GCT 418
consensus_7903#1      GCTGGAC--GATCCATTGACGGACTCGT--CGTCAA--GCGACGAAAACACTGCCTCGCC 257
consensus_7903#2      TCGAGGAAGGG---GACGGCAGAATGCCGCCGGCAGCAGC--TGAGGGGGAGGGCAGGTT 224
                               *       * * **       *  **   **            *    *  

consensus_7903#0      GACCGAAGCCGAAGTGCAGGAAGTACTGTCCGTATGGCGCACGGTCGATTCGTCCAACTT 478
consensus_7903#1      GAC--GACCTCGACCGCTCCCAACACAATCCGC-CGCATCACGGCCGACA-ATCTGGCGT 313
consensus_7903#2      GGCGGCGACGGA------------------------------------------------ 236
                      * *     *                                                   

consensus_7903#0      CCAGAAGGCAAGGCAGCCCGAATTTATGAAGAACGTACTGGACGCCTACCCGGCGATTCG 538
consensus_7903#1      CC---GCGCTTGCTTTCGCGGGCTCGCGCAGCTCGTACAACTCGC-TGTCCAACATCTCC 369
consensus_7903#2      ------------------------------------------------------------
                                                                                  

consensus_7903#0      GCGCAATCTGTTCGTGCTGTCCTTGCTGAAGGATCCAATTCTGCTGTCCTCGATGCAGCA 598
consensus_7903#1      CAGCG--CGATGCGGACAG-CCGTGCTAATCAGCCGGAACCGACTG---GCGAAGGGTCA 423
consensus_7903#2      ------------------------------------------------------------
                                                                                  

consensus_7903#0      GCCGGAAATGGTTCGGCGCGTAGCCCCCAAGCATCCGATACTGGTCGAGGCATCACGCAC 658
consensus_7903#1      GCTGGAACCGGCACGTC-TGTCGCCGCCAACCTGCC--CTCCACCTCAGCTGCTGCCGGC 480
consensus_7903#2      ------------------------------------------------------------
                                                                                  

consensus_7903#0      GATTGTGCAGCTGCTCAACTCCAAGATGATCTCCAAGGTGGCCAACTGTCATCTGTCCGC 718
consensus_7903#1      AGCAAT-CAACCGACCACTTCCTCGAATGCTGCC--GCCGGACGCATCACGTCC-TCGAT 536
consensus_7903#2      ------------------------------------------------------------
                                                                                  

consensus_7903#0      ACCGCTCGACAGCGCGCTGGACGATCCATTGACGGACTCGTC 760
consensus_7903#1      GTTGCTCGAC-GCG---------------------------- 549
consensus_7903#2      ------------------------------------------