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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7906#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1066 fasta sequence
[AGCTCGTTGTTTA-AAACGAGTCTATTCCGTGCTGCATCAACATTCTGCCCAAAAAACCATCATAAAATAGGTTTAACCATGAATTCTGCCACTAAGGTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATCCGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAG----AGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCAGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAAT-GAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATAC-TATTTCGCGCGCGCGCG-GGTAATGTTCTCTGAAAGTAGTGTAACGATGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGATTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCATACATATTGGTTGTGTAAATGGTTGGGAAAGAAGTTCATGTGTGTTTGTGTGTTTCAGTTTTAATATGTGCGGTGTTAATTCGCAAGGGCCCAAGATGTGGTGGTCGCATTGTCTTTTGTATAAATAAATGTGTGCATCGAGTAACTGATGCCTCTCGTCTC--GTAAAAAAAAA]
[+] EMBL CNS08TLX [AGCTCGTTGTTTA AAACGAGTCTATTCCGTGCTGCATCAACATTCTGCCCAAAAAACCATCATAAAATAGGTTTAACCATGAATTCTGCCACTAAGGTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATCCGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAC AGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCAGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAAT GAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGATTTAGTACTGGATGTTAACCGGCAATAC TATTTCGCGCGCGCGCG GGTAGTGTTCTCTGAAAGTA ]
[+] EMBL CNS09MWI [ CGTTGTTTACAAACGAGTCTATTCCGTGCTGCATCAACATTCTGCCCAAAAAACCATCATAAAATAGGTTTAACCATGAATTCTGCCACTAAGGTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATCCGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAG AGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCAGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAAT GAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGATTTAGTACTGGATGTTAACCGGCAATAC TATTTCGCGCGCGCGCG GGTAATGTTCTCTGAAAGTAGTGT ACGATGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGATTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCATACATATTGGTTGTGTAAATGGTTGGGAAAGAAGTTCATGTGTGTTTTTGTGTTTCAGTTTTAATA ]
[+] EMBL BM618082 [ ccgCAACATTCTGCCC AAAAACCATCATAAAATAGGTTTAAGAATGAATTCTGCCACTAAGGTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATCCGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGC AGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCGGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACAGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAATGGAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATAC TATTTCCCGCGCGCGCG ]
[+] EMBL BM592029 [ ccgCATAAAATAGGTTTAACCATGAATTCTGCCACTAAGGTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATCCGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAGCAGCAGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCGGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAAT GAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATAC TATTTCGCG ]
[+] EMBL BX625395 [ GCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATCCGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAGC AGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCGGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAAT GAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATAC TATTTCGCGCGCGCGCGCGGT ATGTTCTCTGAAAGTAGTGTAACGATGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGATTCCTCGGNGGNCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCg ]
[-] EMBL CNS08TLY [ ACAGATGAAGAAATAGAGATGCTTCGGTCCGAAGTAACACGGTTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTTTCGCAAATCCGGGACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAG TAACGCAACCCACTTCCAAAAAGTCACATCACCTGCAGCAAAAAGCGCAGC AGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATTAGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAAT GAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATACTTTTTTCGCGCGCGCGCGCGGT ATGTTCTCTGAAAGTAGTGTAACGATGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGATTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCATACATATTGGTTGTGTAAATGGTTGGGAAAGAAGTTCATGTGTGTTTGTGTGTTTCAGTTTTAATATGTGCGGTGTTAATTCGCAAGGGCCCAAGATGTGGTGGTCGCATTGTCTTTTGTATAAATAAATGTGTGCATCGAGTAACTGATGCCTCTCGTCTCGGGTAAA ]
[-] EMBL CNS09MWJ [ ACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCATACATATTGGTTGTGTAAATGGTTGGGAAAGAAGTTCATGTGTGTTTGTGTGTTTCAGTTTTAATATGTGCGGTGTTCATTCGCAAGGGCCCAAGATGTGGTGGTCGCATTGTCTTTTGTATAAATAAATGTGTGCATCGAGTCACTGATGCCTCTCGTCTC GTAAAAAAAAA]
consensusID : consensus_7906#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 754 fasta sequence
[AAAACCATCATAAAATAGGTTTAACCATGAATTCTGCCACTAAGTTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGATCGCAAATCCGGCACACGCTCAAGAATAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAGCAGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCGGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAATGAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATACTATTTCGCGCGCGCGCGCGGTATGTTCTCTGAAAGTAGTGTAACGATGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGATTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCGTACATATTGGTTGT]
[+] EMBL BX616278 [AAAACCATCATAAAATAGGTTTAACCATGAATTCTGCCACTAAGTTAGGGGAGATTTTTACCGCTGCCGGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCTCCAACCGGATCGCAAATCCGGCACACGCTCAAGAATAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACGCAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAGCAGCAGCAGCAGCAAATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCACATCCGATGGTGATCGAATCGGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTTTGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCAGACGTGGAGGGAATGGCTTCCAGCGAAATGAAGCTCGAGTTCGAACCGGGCACGGAAGAAGTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATGTTAACCGGCAATACTATTTCGCGCGCGCGCGCGGTATGTTCTCTGAAAGTAGTGTAACGATGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGATTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCGTACATATTGGTTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7906#0 AGCTCGTTGTTTAAAACGAGTCTATTCCGTGCTGCATCAACATTCTGCCCAAAAAACCAT 60
consensus_7906#1 ----------------------------------------------------AAAACCAT 8
********
consensus_7906#0 CATAAAATAGGTTTAACCATGAATTCTGCCACTAAGGTAGGGGAGATTTTTACCGCTGCC 120
consensus_7906#1 CATAAAATAGGTTTAACCATGAATTCTGCCACTAAGTTAGGGGAGATTTTTACCGCTGCC 68
************************************ ***********************
consensus_7906#0 GGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCT 180
consensus_7906#1 GGTGCTGCATTCAACAGCCTGGGAGAGCTAACGATGCAACTGCACCCTTCGTCCGATTCT 128
************************************************************
consensus_7906#0 CCAACCGGGAGCAAATGGACAGATGAAGAAATAGAGATGCTTCGGTCCGCAGTCACACGG 240
consensus_7906#1 CCAACCGG---------------------------------------------------- 136
********
consensus_7906#0 TTCAGTGAGGATTTGAGCAAAATCAGTCAGCGCATCAAAGGCCGTACGGTATCGCAAATC 300
consensus_7906#1 --------------------------------------------------ATCGCAAATC 146
**********
consensus_7906#0 CGGCACACGCTCAAGAAGAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACG 360
consensus_7906#1 CGGCACACGCTCAAGAATAAAGCGTTCGAAGATGCTGGCCTACCGGTCAGGCAGCTAACG 206
***************** ******************************************
consensus_7906#0 CAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAG-AGCAGCAGCAGCAA 419
consensus_7906#1 CAACCCACTTCCACACAGTCACATCACCTGCAGCAACAAGCGCAGCAGCAGCAGCAGCAA 266
********************************************* **************
consensus_7906#0 ATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCA 479
consensus_7906#1 ATCATTGTTACGTCCTCTGCACACTACGAGGAGGGAGTTCCTTCCTCTACCGTAATTGCA 326
************************************************************
consensus_7906#0 CATCCGATGGTGATCGAATCAGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTT 539
consensus_7906#1 CATCCGATGGTGATCGAATCGGTCATAAAGGACGATAATACCGAGTCGAGCGGGTTGCTT 386
******************** ***************************************
consensus_7906#0 TGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCA 599
consensus_7906#1 TGCCAACCGGCCGACATTTCGATGACGCTGAACCGGCTAAACACGCAGGAACACGAGGCA 446
************************************************************
consensus_7906#0 GACGTGGAGGGAATGGCTTCCAGCGAAATGAAGCTCGAGTTCGAACCGGGCACGGAAGAA 659
consensus_7906#1 GACGTGGAGGGAATGGCTTCCAGCGAAATGAAGCTCGAGTTCGAACCGGGCACGGAAGAA 506
************************************************************
consensus_7906#0 GTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATG 719
consensus_7906#1 GTGGCCGGGTGAAACGAGGATGATTTTTACTACAGCGAACCGAAGGATTAGTACTGGATG 566
************************************************************
consensus_7906#0 TTAACCGGCAATACTATTTCGCGCGCGCGCGGGTAATGTTCTCTGAAAGTAGTGTAACGA 779
consensus_7906#1 TTAACCGGCAATACTATTTCGCGCGCGCGCGCGGTATGTTCTCTGAAAGTAGTGTAACGA 626
******************************* * *************************
consensus_7906#0 TGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGA 839
consensus_7906#1 TGCAATGGGTATATGGGTAGCCTAAATTGAAACCAATCTTCCCTCCCTTCATGCAGTAGA 686
************************************************************
consensus_7906#0 TTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCATACATA 899
consensus_7906#1 TTCCTCGGTGGCCAACTCTATGACTTTAAAACGATCTCCCGAACGAACAAGTCGTACATA 746
***************************************************** ******
consensus_7906#0 TTGGTTGTGTAAATGGTTGGGAAAGAAGTTCATGTGTGTTTGTGTGTTTCAGTTTTAATA 959
consensus_7906#1 TTGGTTGT---------------------------------------------------- 754
********
consensus_7906#0 TGTGCGGTGTTAATTCGCAAGGGCCCAAGATGTGGTGGTCGCATTGTCTTTTGTATAAAT 1019
consensus_7906#1 ------------------------------------------------------------
consensus_7906#0 AAATGTGTGCATCGAGTAACTGATGCCTCTCGTCTCGTAAAAAAAAA 1066
consensus_7906#1 -----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||