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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7918#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1281 fasta sequence
[CCGTTGCGCTCCGGAGATGAAGTCGTTTGCGAAGATGCTGTTCCTGTCGTCAGTGTTGTGTGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACTGCTCGGATCGACTAAACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGGCCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGACACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACACGCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGCATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCCATACCAAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTCCTCTACAGCTGGTGATCAACCGAAAT-GGGAAAAGTGTT-CCCTTCCTGATCGGCCACAAATCGATCGGTAAAGCTTGCGGTGTCAAAAGTCCCGCCGTATTCACGCGCTACGGCTCTTACTACGAGTGGTTGGAAACGATCACCGATCTACCGCTCGAGGCTACGGCTTGCTTTAGCCGCTACTGACAAAGAAGGATGAGTTTTAACTAACGCACCGTGTTGCCTTGTCTTGCGTGGTACACAATTAAGCTTTTAGACAAAAGTAGGGCCAGCCACGAAAACCTGTTCACAATTCGGGGTTTCTTTGACGGTGGACGGGATTCCCCCAACCTATTACATCGGGTTTAGTTGTCAACCATTATGAGCTGTTTTTTTCAGTGTCTTTCAAACACTTCACAAGCTTTTTTCACATAACTATTTAACTTACATGGAGTTTGCTACTACTAAACATGTATATTTATTCCAATAAAACAACTTTAAAATAAACACTTTAACTTAACTTGTAATTGTTTAATAATTATTTCAATTTATTTTATCTGCTTGCGAGTGATTTTCACGTTAGGAAATACATCTCACACAATAAAATATATTCTACCTAACTTTATCAGGTTTTGATGATATTAGAATATGTTTTATAACTATACAATGAAGATGAA]
[+] EMBL BM579399 [CCGTTGCGCTCCGGAGATGAAGTCGTTTGCGAAGATACTGTTCCTGTCGTCAGTGTTGTGTGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACTGCTCGGATCGACTAGACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGGCCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGACACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACACGCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGCATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGAACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCCATACCAAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTCCTCTACAGCTGGTGATCAACCGAAAT GGGAAAAGTGTTCCCCTTCCTGATCGGC ]
[+] EMBL BM644033 [ ccgGCGCTCCGGAGATGAAGTCGTTTGCGAAGATGCTGTTCCTGTCGTCAGTGTTGTGTGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACTGCTCGGATCGACTAAACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGGCCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGACACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACACGCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGTATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGGACGTTGTAGCCTCCGAGAAGTGTCACGAATACTATAATCCCATACCGAAGCTTCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTC ]
[+] EMBL BM597556 [ ccgCCGGAGATGAAGTCGTTTGCGAAGATGCTGTTCCTGTCGTCAGTGTTGTGTGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACTGCTCGGATCGACTAAACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGGCCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGACACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACACGCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGTATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGGACGTTGTAGCCTCCGAGAAGTGTCACGAATACTATAATCCCATACCGAAGCTTCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTCCTCTACAGCTGGTGATCAACCGAAATGGGGAAAAGTGTT CCCTTCCTGATCGGCCACAAATCGATCGGTAAAGCTTGCGG ]
[+] EMBL BX615922 [ GCGAAGATGCTGTTCCTGTCGTCAGTGTTGTGTGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACTGCTCGGATCGACTAAACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGGCCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGACACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACACGCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGCATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCTATACCAAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCT ]
[+] EMBL BX608419 [ TGTGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACTGCTCGGATCGACTAAACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGGCCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGACACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACACGCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGCATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCTATACCAAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTCCTCTACAGCTGGTGATCAACCGAAAT GGGAAAAGTGTT CCCTTCCTGATCGGCCACAAATCGATCGGTAAAGCTTGCGGTGTCAAAAGTCCCGCCGTATTCACGCGCTACGGCTCTTACTACGAGTGGTTGGAAACGATCACCGATCTACC ]
[+] EMBL BX604392 [ ACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCAGGATGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGTATTCTGAAACCCCACATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTTCAGTCCACTTCGTTGGACGTTGTAGCCTCCGAGAAGTGTCACGAATACTATAATCCCATACCGAAGCTTCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTG ]
[+] EMBL BM637156 [ ccgGATCAACCGAAAT GGGAAAAGTGTT CCCTTCCTGATCGGCCACAAATCGATCGGTAAAGCTTGCGGTGTCAAAAGTCCCGCCGTATTCACGCGCTACGGCTCCTACTACGAGTGGCTGGAAACGATCACCGATCTACCGCTCGAGGCTACGGCTTGCTTTAGCCGCTACTGACAAAGAAGGATGAGTTTTAACTAACGCACCGTGTTGCCTTGTCTTGCGTGGTACACAATTAAGCTTTTAGACAAAAGTAGGGCCAGCCACGAAAACCTGTTCACAATTCGGGGTTTCTTTGACGGTGGACGGGATTCCCCCAACCTATTACATCGGGTTTAGTTGTCAACCATTATGAGCTGTTTTTTTCAGTGTCTTTCAAACACTTCACAAGCTTTTTTCACATAACTATTTAACTTACATGGAGTTTGCTACTACTAAACATGTATATTTATTCCAATAAAACAACTTTAAAATAAACACTTTAACTTAACTTGTAATTGTTTAATAATTATTTCAATTTATTTTATCTGCTTGCGAGTGATTTTCACGTTAGGAAATACATCTCACACAATAAAATATATTCTACCTAACTTTATCAGGTTTTGATGATATTAGAATATGTTTTATAACTATACAATGAAGATGAA]
consensusID : consensus_7918#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence
[CCGCCCACGCGTCCGATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTCCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCCATACCGAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTCCTTTACAGCTGGTGATCAACCGAAATGGGAAAAGTGTTCCCTTCCTGATCGCCCACAAATCGATCGGTAAAGCTTGCGGAGTCAAAAGTCCCGCCGTATTCACGCGCTACGGCTCCTACTACGAGTGGCTGGAAACGATCACCGATCTACCGCTCGAGGCTACGGCTTGCTTTAGCCGTTACTGACAAAGAAGGATGAGTTTTAACAAACGCACCGTGTTGCCTTGTCTTGCGTGGTACACAATTATGCTTTTAGACAAAAGTAGGGCCAGCCACGAAAACCTGTTCACAATTCGGGGTTTCTTTGACGGTGGATGGGATTCCCCCAACCTATTACTTCGGGTTTAGTTGTCCAACCATTATGTGCTGTTTTTTTCAGTGGCTTTCAAACACTTCACAAGCTTTTTTCACATAACTATTTAACTTACATGGAGTTTGCTACTACTAAACATGTATATTTA]
[+] EMBL BM590808 [CCGCCCACGCGTCCGATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACTCCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCCATACCGAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAACCGAATGCTCGAATATGCACAGTTCTCCTTTACAGCTGGTGATCAACCGAAATGGGAAAAGTGTTCCCTTCCTGATCGCCCACAAATCGATCGGTAAAGCTTGCGGAGTCAAAAGTCCCGCCGTATTCACGCGCTACGGCTCCTACTACGAGTGGCTGGAAACGATCACCGATCTACCGCTCGAGGCTACGGCTTGCTTTAGCCGTTACTGACAAAGAAGGATGAGTTTTAACAAACGCACCGTGTTGCCTTGTCTTGCGTGGTACACAATTATGCTTTTAGACAAAAGTAGGGCCAGCCACGAAAACCTGTTCACAATTCGGGGTTTCTTTGACGGTGGATGGGATTCCCCCAACCTATTACTTCGGGTTTAGTTGTCCAACCATTATGTGCTGTTTTTTTCAGTGGCTTTCAAACACTTCACAAGCTTTTTTCACATAACTATTTAACTTACATGGAGTTTGCTACTACTAAACATGTATATTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7918#0 CCGTTGCGCTCCGGAGATGAAGTCGTTTGCGAAGATGCTGTTCCTGTCGTCAGTGTTGTG 60
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 TGTTGCTTTGCATGTACAGGGAATCTTCAGCCAAAATCCACAAACATCACACATTGTACT 120
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 GCTCGGATCGACTAAACCGGATGGAACACGTGAATTTCGCTGTGGAGGATCGTACATTGG 180
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 CCAAAACATTGTGCTCGCCGGGGCACATTGTGTTACAGGGAAAAATCAACCGGCCCTGGA 240
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 CACCGTACGTTTTGGCAGTGGCACGGATAACGTTATGCACTTTCGCATCGTTAATCACAC 300
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 GCTGCACTATCGCTACAAACCACAGTTCGAATATCACAACATGGCTGTCTACTATCTGGA 360
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 TGCGAGACCCGATCTCGTCAATGCAGGACGCTTCAAACCGGCTTGCATTCTGAAACCCCA 420
consensus_7918#1 ----------------------------------------------CCGCCCACGCGTCC 14
* * * *
consensus_7918#0 CATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACT 480
consensus_7918#1 GATGAAGCAGGGCATTGTACAGATGGTTGGAGATAGCTCCAATGGTCGCGGATTGGCACT 74
***********************************************************
consensus_7918#0 TCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCCAT 540
consensus_7918#1 CCAGTCCACTTCGTTGGACGTTGTAGCGTCCGAGAAGTGTCACGAATACTATAATCCCAT 134
***********************************************************
consensus_7918#0 ACCAAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAAC 600
consensus_7918#1 ACCGAAGCTGCGCTTTGGTGTGTTGCTCTGCTGTTTCTGTGCAATGAACTCGGACACAAC 194
*** ********************************************************
consensus_7918#0 CGAATGCTCGAATATGCACAGTTCTCCTCTACAGCTGGTGATCAACCGAAATGGGAAAAG 660
consensus_7918#1 CGAATGCTCGAATATGCACAGTTCTCCTTTACAGCTGGTGATCAACCGAAATGGGAAAAG 254
**************************** *******************************
consensus_7918#0 TGTTCCCTTCCTGATCGGCCACAAATCGATCGGTAAAGCTTGCGGTGTCAAAAGTCCCGC 720
consensus_7918#1 TGTTCCCTTCCTGATCGCCCACAAATCGATCGGTAAAGCTTGCGGAGTCAAAAGTCCCGC 314
***************** *************************** **************
consensus_7918#0 CGTATTCACGCGCTACGGCTCTTACTACGAGTGGTTGGAAACGATCACCGATCTACCGCT 780
consensus_7918#1 CGTATTCACGCGCTACGGCTCCTACTACGAGTGGCTGGAAACGATCACCGATCTACCGCT 374
********************* ************ *************************
consensus_7918#0 CGAGGCTACGGCTTGCTTTAGCCGCTACTGACAAAGAAGGATGAGTTTTAACTAACGCAC 840
consensus_7918#1 CGAGGCTACGGCTTGCTTTAGCCGTTACTGACAAAGAAGGATGAGTTTTAACAAACGCAC 434
************************ *************************** *******
consensus_7918#0 CGTGTTGCCTTGTCTTGCGTGGTACACAATTAAGCTTTTAGACAAAAGTAGGGCCAGCCA 900
consensus_7918#1 CGTGTTGCCTTGTCTTGCGTGGTACACAATTATGCTTTTAGACAAAAGTAGGGCCAGCCA 494
******************************** ***************************
consensus_7918#0 CGAAAACCTGTTCACAATTCGGGGTTTCTTTGACGGTGGACGGGATTCCCCCAACCTATT 960
consensus_7918#1 CGAAAACCTGTTCACAATTCGGGGTTTCTTTGACGGTGGATGGGATTCCCCCAACCTATT 554
**************************************** *******************
consensus_7918#0 ACATCGGGTTTAGTTGTC-AACCATTATGAGCTGTTTTTTTCAGTGTCTTTCAAACACTT 1019
consensus_7918#1 ACTTCGGGTTTAGTTGTCCAACCATTATGTGCTGTTTTTTTCAGTGGCTTTCAAACACTT 614
** *************** ********** **************** *************
consensus_7918#0 CACAAGCTTTTTTCACATAACTATTTAACTTACATGGAGTTTGCTACTACTAAACATGTA 1079
consensus_7918#1 CACAAGCTTTTTTCACATAACTATTTAACTTACATGGAGTTTGCTACTACTAAACATGTA 674
************************************************************
consensus_7918#0 TATTTATTCCAATAAAACAACTTTAAAATAAACACTTTAACTTAACTTGTAATTGTTTAA 1139
consensus_7918#1 TATTTA------------------------------------------------------ 680
******
consensus_7918#0 TAATTATTTCAATTTATTTTATCTGCTTGCGAGTGATTTTCACGTTAGGAAATACATCTC 1199
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 ACACAATAAAATATATTCTACCTAACTTTATCAGGTTTTGATGATATTAGAATATGTTTT 1259
consensus_7918#1 ------------------------------------------------------------
consensus_7918#0 ATAACTATACAATGAAGATGAA 1281
consensus_7918#1 ----------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||