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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7926#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1857 fasta sequence
[GTGGTGTGTGCGCGATTGGAAGTTTTGGTTGATTAAGCCCAATGTAAAACATTAGCAATGATGGAAGTGCAGCTAAAATCCGTTGCTTAATTCTATCGCATATTGTTGATGTAGTTGTGATTCTTGTTGTTAAAGGAAACCCGATTTTAAAGCACTCTCTATTTATCCAATAACATGAGACTAAAGCATTTAGCATTCCAACTGATGGCAAGCGTTAAACCATGCGTTGTTGTTAATAAGTTCACTTCAAAAGGAACATTGTATCGAAAAAAAAGGATTATTAGCATAACAAGAAACAGGGCGACCACTTTCTTTCAGCAGGTCAAACGTACACTTATATTATCTTAAACAAATGCTTAGAAACGTTACTTGCTTACAGAGATGTATTTTAGTAAAGAAAAAACCCAAGAATGCGTTTTAAACGTTATGGTTATGTTATGTGCTTTTGTTCAGGGCTTATTTACACCAGATTCAAGCTAGTCATTATTATTGTAGCAAATATTTAAAAGACATGTTGATTGAAAATCCACTTTTATGAGTTGCGCTACTGCTAAATAGCGCAAC-AAAAAAAAAAGACAAAACTATCAAAGTATATAAGTAACGTATTAAAAAGGCTATCCTATTGAAGTAGCATCGGAAAATGCATAGTGCACCCCGCAAACACATTGGTGCATTGGTGTGTGTGTGTGTGTGTGTGTGCATTGGCAGTGCGTTTATAGTTGTAGTAGAAGTAGCACACACCTCCATGGCATGGCATGAGCTCAGTATATACATACATACATGTATACATATTCAATATGCCCGCACAGTATAATCTTGTCCATTCATCATTAGGCGCATGGAATCGAACGATTCAGGTAAAAAACGTATATAACAATATATATTATTAACTATTAGCATATTGG-AAAAAAACCGAAAGATTTCATCACAATCGTGTCGACCGATAATCGTTTGCATCGTGAAGAATGCGTGAATTCCCGTTTAGAAAGGTTAGTGCAGAAGAATGTAACAGAGAGTGGCAGAAGAAGCCGATAAAGAAGCCGTGCACGT-CA------ATTGGAAAAATTGCTTCGAGCACTGGCTAGCTACGATCGTTTGCGGCATGTCGTGTCCGGCAAGGTAGGAGCTTCACGGTGCATTGGACACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATATCGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCTACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTGCGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGCGTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAATGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTTCTGTTA-TCTTAGCGAGGCTGCCG---AGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTTTTAGCTTTTAGCAATGTGTTTAAAACGGTGTTTAACTCTGCTGTCGCTGTAGACTACTGCGGTTTTGTGCTTATCATGCGTAACATATGGTTTGAGTTTCAGCACACGATCGATTCGTGGCCAACTTCATGGAACAGGCTTAAGTAACCAGTAAAAACAAAAATCACATTTTACTCAGAACGTGCTTATTGAAGGAATCGACTCGAAATACGAGTTGGGAGTGTTTAGTACAATTTA]
[+] EMBL BX603254 [GTGGTGTGTGCGCGATTGGAAGTTTTGGTTGATTAAGCCCAATGTAAAACATTAGCAATGATGGAAGTGCAGCTAAAATCCGTTGCTTAATTCTATCGCATATTGTTGATGTAGTTGTGATTCTTGTTGTTAAAGGAAACCCGATTTTAAAGCACTCTCTATTTATCCAATAACATGAGACTAAAGCATTTAGCATTCCAACTGATGGCAAGCGTTAAACCATGCGTTGTTGTTAATAAGTTCACTTCAAAAGGAAC ]
[+] EMBL BM590420 [ ccgTTAGCAATGATGTAAGTGCAGCTAAAATCCGTTGCTTAATTCTATCGCATATTGTTGATGTAGTTGTGATTCTTGTTGTTAAAAGAAACCCGATTTTAAAGCACTCTCTATTTATCCAATAACATGAGACTAAAGCATTTAGCATTCCAACTGATGGCAAGCGTTAAACCATGCGTTGTTGTTAATAAGTTCACTTCAAAAGGAACATTGTATCGAAAAAAAAGGATTATTAGCATAACAAGAAACAGGGCGACCACTTTCTTTCAGCAGGTCAAACGTACACTTATATTATCTTAAACAAATGCTTAGAAACGTTACTTGCTTACAGAGATGTATTTTAGTAAAGAAAAAACCCAAGAATGCGTTTTAAACGTTATGGTTATGTTATGTGCTTTTGTTCAGGGCTTATTTACACCAGATTCAAGCTAGTCATTATTATTGTAGCAAATATTTAAAAGACATGTTGATTGAAAATCCACTTTTATGAGTTGCGCTACTGCTAAATAGCGCAACAAAAAAAAAAAGACAAAACTATCAAAGTATATAAGTAACGTATTAAAAAGGCTATCCTATTGAAGTAGCATCGGAAAATGCATAGTGCACCCCGCAAACACATTGGTGC ]
[+] EMBL BM617662 [ ccgATTTAACAGACATGTTGATTAAAAATCTATTTACATGAGTTGCGCTACTGCTAAACAGCGCAAC AAAAAAAAAACACAAAACTATCAAAGTATATAAGTAACGTATTAAAAAGGCTATCCTATTGAAGTAGCATCGGAAAATGCATAGTGCACCCCGCAAACACATTGGTGCATTGGTGTGTGTGTGTGTGTGTGTGTGCATTGGCAGTGCGTTTATAGTTGTAGTAGAAGTAGCACACACCTCCATGGCATGGCATGAGCTCAGTATATACATACATACATGTATACATATTCAATATGCCCGCACAGTATAATCTTGTCCATTCATCATTAGGCGCATGGAATCGAACGATTCAGGTAAAAAACGTATATAACAATATATATTATTAACTATTAGCATATTGGAAAAAAAACCGAAAGATTTCATCACAATCGTGTCGACCGATAATCGTTTGCATCGTGAAGAATGCGTGAATTCCCGTTTAGAAAGGTTAGTGCAGAAGAATGTAACAGAGAGTGGCAGAAGAAGCCGATAAAGAAGCCGTGCACGTGCACTGTCTATTGGAAAAATTGCTTCGAGCACTGGCTAGCTACGATCATTTGCGGCATGTTGTGTCCGGC ]
[+] EMBL BX620318 [ ATGTATACATATTTAATATGCCCGCACAGTATAATCTTGTCCATTCATCATTAGGCGCATGGAATCGAACGATTCAGGTAAAAAACGNATATAACAATATATATTATTAACTATTAGCATATTGG AAAAAAACCGAAAGATTTCATCACAATCGTGTCGACCGATAATCGTTTGCATCGTGAACAATGCGTGAATTCCCGTTTAGAAAGGTTAGTGCAGAAGAATGTAACAGAGAGTGGCAGAAGAAGCCGATAAAGAAGCCGTGCACGT CA ATTGGAAAAATTGCTTCGAGCACTGGCTAGCTACGATCGTTTGCGGCATGTCGTGTCCGGCAAGGTAGGAGCTTCACGGTGCATTGGACACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATATCGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCTACCACTTCAGCGGATCAGGGCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTT ]
[+] EMBL BX617664 [ GCACGT CA ATTGGAAAAATTGCTTCGAGCACTGGCTAGCTACGATCGTTTGCGGCATGTCGTGTCCGGCAAGGTAGGAGCTTCACGGTGCATTGGACACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATATCGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCTACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTGCGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGCGTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAATGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGTGCGTTTTCTGTTA TCTTAGCGAGGCTGCCG AGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTTTTAGCTTTTAGCAATGTGTTTAAAACGGTGTTTAACTCTGCTGTCGCTGTAGACTACTGCGGTTTTGTGCTTATCATGCGTAACATATGGTTTGAGTTTCAGCACACGATCGATTCGTGGCCAACTTCATGGAACAGGCTTAAGTAAC ]
[+] EMBL BX618591 [ GATCGTTTGCGGCATGTCGTGTCCGGCAAGGTAGGAGCTTCACGGTGCATTGGACACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATATCGATTACATATCAGCT TATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCTACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTGCGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGCGTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAATGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTTCTGTTA TCTTAGCGAGGCTGCCG AGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTTTTAGCTTT ]
[+] EMBL BX617308 [ ACTTCAGCGGATCAGACCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCACTTAACGCAAGCAGATGTTTGCAGTTTTGCGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGCGTTTAGGGATTATTCACAGCCATTTAAGGCTGTGGTGTTAAGTATGATGTTGTTGTTCAATGAG A GAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTTCTGTTAGTCTTAGCCTCG TGCCGGGTGGTGGTGGTTGGCGCATACCGAGTATTAAACTTGCTTTTAGCTTTTAGCAACGTGTTTAAAACGGTGTTTAACTCTGCTGTCGCTGTAGACTACTGCTGTGTTGTGCTTATCCTGCGTAACATATGGTTTGAGTTTCAGCACACGATCGATTCGTGGCCAACTTCATGGAACAGGCTTAAGTAAACAGTAAAAACAAAAATCACATTTTACTCAGAACGTGCTTATTGAAGGAATCGACTCGAAATACGAGTTGGGAGTGTTTAGTACAATTTA]
consensusID : consensus_7926#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence
[AGCCCACTTTGCGTGCGATAGTACAGTAAGATACCACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATATCGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCTACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTGCGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGCGTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAATGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTTCTGTTATCTTAGCGAGGCTGCCGAGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTTTTAGCTTTTAGCAATGTGTTTTA]
[+] EMBL BX616046 [AGCCCACTTTGCGTGCGATAGTACAGTAAGATACCACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATATCGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCTACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCAACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTGCGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGCGTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAATGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTTCTGTTATCTTAGCGAGGCTGCCGAGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTTTTAGCTTTTAGCAATGTGTTTTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7926#0 GTGGTGTGTGCGCGATTGGAAGTTTTGGTTGATTAAGCCCAATGTAAAACATTAGCAATG 60
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 ATGGAAGTGCAGCTAAAATCCGTTGCTTAATTCTATCGCATATTGTTGATGTAGTTGTGA 120
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 TTCTTGTTGTTAAAGGAAACCCGATTTTAAAGCACTCTCTATTTATCCAATAACATGAGA 180
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 CTAAAGCATTTAGCATTCCAACTGATGGCAAGCGTTAAACCATGCGTTGTTGTTAATAAG 240
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 TTCACTTCAAAAGGAACATTGTATCGAAAAAAAAGGATTATTAGCATAACAAGAAACAGG 300
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 GCGACCACTTTCTTTCAGCAGGTCAAACGTACACTTATATTATCTTAAACAAATGCTTAG 360
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 AAACGTTACTTGCTTACAGAGATGTATTTTAGTAAAGAAAAAACCCAAGAATGCGTTTTA 420
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 AACGTTATGGTTATGTTATGTGCTTTTGTTCAGGGCTTATTTACACCAGATTCAAGCTAG 480
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 TCATTATTATTGTAGCAAATATTTAAAAGACATGTTGATTGAAAATCCACTTTTATGAGT 540
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 TGCGCTACTGCTAAATAGCGCAACAAAAAAAAAAGACAAAACTATCAAAGTATATAAGTA 600
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 ACGTATTAAAAAGGCTATCCTATTGAAGTAGCATCGGAAAATGCATAGTGCACCCCGCAA 660
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 ACACATTGGTGCATTGGTGTGTGTGTGTGTGTGTGTGTGCATTGGCAGTGCGTTTATAGT 720
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 TGTAGTAGAAGTAGCACACACCTCCATGGCATGGCATGAGCTCAGTATATACATACATAC 780
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 ATGTATACATATTCAATATGCCCGCACAGTATAATCTTGTCCATTCATCATTAGGCGCAT 840
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 GGAATCGAACGATTCAGGTAAAAAACGTATATAACAATATATATTATTAACTATTAGCAT 900
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 ATTGGAAAAAAACCGAAAGATTTCATCACAATCGTGTCGACCGATAATCGTTTGCATCGT 960
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 GAAGAATGCGTGAATTCCCGTTTAGAAAGGTTAGTGCAGAAGAATGTAACAGAGAGTGGC 1020
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 AGAAGAAGCCGATAAAGAAGCCGTGCACGTCAATTGGAAAAATTGCTTCGAGCACTGGCT 1080
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 AGCTACGATCGTTTGCGGCATGTCGTGTCCGGCAAGGTAGGAGCTTCACGGTGCATTGGA 1140
consensus_7926#1 --------------AGCCCACTTTGCGTGCGATAGTACAGTAA------GATAC------ 34
** * * ** ** * ** * * * *
consensus_7926#0 CACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATAT 1200
consensus_7926#1 CACATTACTATCGCACGCCATACACATATCAACACCATTAGGAACGATTAACATACATAT 94
************************************************************
consensus_7926#0 CGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCT 1260
consensus_7926#1 CGATTACATATCAGCTCTATAAAAGCATAGTAAAGGAAAGAAAAAAACGAAACAAATCCT 154
************************************************************
consensus_7926#0 ACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCA 1320
consensus_7926#1 ACCACTTCAGCGGATCAGGCCCCGCCAAAGTGTCTCCTACACATGTCACATTTTTTAGCA 214
************************************************************
consensus_7926#0 ACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTG 1380
consensus_7926#1 ACGATGCCACGCGCACCACGCATCCATCGCTCTTAACGCAAGCAGCTGTTTGCAGTTTTG 274
************************************************************
consensus_7926#0 CGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGC 1440
consensus_7926#1 CGCGGTAGAGTAAACGCAGCAGCAAAATGCATGCATTTGGCTGTGGCGCGTGGTAATAGC 334
************************************************************
consensus_7926#0 GTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAA 1500
consensus_7926#1 GTTTAGGGATTATTCACAGCCATTTAAGGTTGTGGTGTTAAGTATGGTGTTGTTGTTCAA 394
************************************************************
consensus_7926#0 TGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTT 1560
consensus_7926#1 TGAGTACGAACTATTGCTAGCATTTAGTGGCGTGTGTATACATGTTTAGACGGGCGTTTT 454
************************************************************
consensus_7926#0 CTGTTATCTTAGCGAGGCTGCCGAGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTT 1620
consensus_7926#1 CTGTTATCTTAGCGAGGCTGCCGAGTGGTGGATGGCGCGTACCGAGTATTAAACTTGCTT 514
************************************************************
consensus_7926#0 TTAGCTTTTAGCAATGTGTTTAAAACGGTGTTTAACTCTGCTGTCGCTGTAGACTACTGC 1680
consensus_7926#1 TTAGCTTTTAGCAATGTGTTTTA------------------------------------- 537
********************* *
consensus_7926#0 GGTTTTGTGCTTATCATGCGTAACATATGGTTTGAGTTTCAGCACACGATCGATTCGTGG 1740
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 CCAACTTCATGGAACAGGCTTAAGTAACCAGTAAAAACAAAAATCACATTTTACTCAGAA 1800
consensus_7926#1 ------------------------------------------------------------
consensus_7926#0 CGTGCTTATTGAAGGAATCGACTCGAAATACGAGTTGGGAGTGTTTAGTACAATTTA 1857
consensus_7926#1 ---------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||