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Anopheles gambiae
cluster # 7949 cluster # 7949       Sequences # 8       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7949#0 length = 1940 sequences # 6  
 consensus_7949#1 length = 1190 sequences # 1  
consensus_7949#2 length = 630 sequences # 1  
consensusID : consensus_7949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1940
fasta sequence 
                              [GGCAGAATCGCCCGAGGTTCAAGCGCACGTTTAGTGAGAANCAGGAGTGACGTTACTACAGCCATGGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAACGGCTGCCTTATAGTGCTGCTGGTGGGGTTCTTTGTAGTCGTAAGCGCACACCGATGGCTCATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGTTGCGGGGCTTGAACTGCGCAATCATCCCGTCGTCGATGGAGTGTTTCAGATTGTGTGGATTACGGCGGTAGCTTCGCTCTATCAGGCACTCTGGTTGGAAGTGGAACTGTTGCTGTACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATCAAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAACGAAGAATCGCAAATCATCTATCCCACCTGGAGCTACCGGTTACCCATTAGTCAGCGTACAGTAAGATGGAAAGAAACAG-CGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAA-TTCGTGTAAGTTGCGAACGATCTTTATCGCAGATGTTCTTGTGCAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTGGTTTCAGTTTATGTAGGAAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCCCAAATTCGTGTATTTTATCAAGTTAAACAGCTACATTGTAGTGAGCATGATAGTGATACACGTACGGGACGTTGTGCAGAGGCAGAGTGGCCACCAATACCCTTTAGCCGAATGTAAGATCTGTCTGGATATACGCCTAACAACACGCAACTGACCCGACGTTTTCTGTTCAGGGCTCGAACTGCGTAATCATCCGCTCGTAGAGGATGTGTTTAACAGATATTGGAAGTTTGCTGAATTTACTCATCTGTTGGGTGTCCTGTTGGTACGTAGTTAGTGTACGAATCTCAGAACCATTGCGCTGAGTTCTGTGTCGTATACATTTCTCATGCTTTGGATTACGATCGACAGGAAATTGACCATTTTCTAATCCCGATCGGGTTTATATTTGGCCTGGAAGTGCTCACTGTTGCTGCTGGAGACGTGATCTGGCACGATATAGGGGAGAATTATAAATTCCTCCTAGCTCTAATCATTTGGTTCGGTAAGGCCCATAGACACACGTTATCTGATGTTTGCTGCGTGGGATCTTAAAGCGGTATTTGTTCTTTCAAACTACCGCTATGTAAAAGTGTACTTCTACTACATCATGTACATCCTACGGAAGTTGTTCCGAGCGAGGAATTGCAACGTTTCCGGGTCAGAATCACCCGCAAACGCCATCAGACGCATTATGAGGGAGTTAACTCAAACGAAAGATCGTACCGTTTCCCGGGATTCGGAATCAGATGCTGGGAACCCATTGGTCAAGGTGTAAGTGCTGTCTTTCCTGTTCTGTACAAAAATTACTTAAGGTTTTGAGCTTGAAATGGTAGCTCTCGAGCGAGCGGCTTGCGTGAGTCACTGAGAGGGAAGGTCACATATCGCTCCCCAAACCAATGTTTGTCTGATGTACGTACGACATTTCGTAGTTATCGCATTAAAGCATCAAACATTGAAAACGCACCAAAACTGACGCCGGCGCACTACCCATTGATGAGACATTGACGATGTGAAAGAACTGTTGTTGTGATTGTGGAGTTGGTCGTAACCTTTATCTTGCAGTTGACTGTTTGAAGCACACGGAGCAGTTGTTGCCCGTCATGTGTACAGACGCGTGTGATTGACTTGAGTGTGTCAAGGCATGTCAAATTCAAGTCACAGCTNCCGAATAGTGCT]

[+] EMBL AL696887             [GGCAGAATCGCCCGAGGTTCAAGCGCACGTTTAGTGAGAANCAGGAGTGACGTTACTACAGCCATGGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAACGGCTGCCTTATAGTGCTGCTGGTGGGGTTCTTTGTAGTCGTAAGCGCACACCGATGGCTCATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGTTGCGGGGCTTGAACTGCGCAATCATCCCGTCGTCGATGGAGTGTTTCAGATTGTGTGGATTACGGCGGTAGCTTCGCTCTATCAGGCACTCTGGTTGGAAGTGGAACTGTTGCTGTACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATCAAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAACGAAGAATCGCAAATCATCTATCCCACCTGGAGCTACCGGTTACCCATTAGTCAGCGTACAGTAAGATGGAAAGAAACAG CGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCNAA TTCGTGTAAGTTGCGAACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM613101             [           ccggtcaTCACGCGCACG TTAGTGAGAAGCAGGAGTGACGTTACTACAGCCAT GCTGCAGTCCAAGTTTGTTCTGTATATCAAATTTAACGGCTGCCTTATAGTGCTGCTGGTGGGGTTCTTTGTAGTCGTAAGCGCACACCGATGGCTCATGCAAATGCAGAACTGGAGCGCGTATCCTTTCGTTGCGGGGCTTGAACTGCGCAATCATCCCGTCGTCGATGGAGTGTTTCAGATTGTGTGGATTACGGCGGTAGCGTCGCTCTATCAGGCACTCTGGTTGGAAGTGGAGCTGTTGCTGTACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATCAAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAACGAAGAATCGCAAATCTTCTGTCCCACCTGGAGCTACCGATTACCCATTAGTCAGCGTACAGTAAGATGGAAAGAAACAGCCGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAATTTCGTGTAAGTTGCGAACGATCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX604895             [                                                                                                                                                                                                                                                                                                                                                          CTGCTAGTTGCCGCCGGGGACGTGATCTAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAACGAAGAATCGCAAATCATCTATCCCACCTGGAGCTATCGGTTACCCATTAGTCAGCGTACAGTAAGATGGAAAGAAACAG CGCGAGGGAGTTCCTTTACTGTACAGCGTAGTCGACACCTAGCCGTATTTAGTCGTAATGGCAAA TTCGTGTAAGTTGCGAACGATCTTTATCGCAGATGTTCTTGTGCAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTGGTTTCAGTTTATGTAGGAAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCCCAAATTCGTGTATTTTATCAAGTTAAACAGCTACATTGTAGTGAGCATGATAGTGATACACGTACGGGACGTTGTGCAGAGGCAGAGTGGCCACCAATACCCTTTAGCCGAATGTAAGATCTGTCTGGATATACGCCTAACAACACGCAACTGACCCGACGTTTTCTGTTCAGGGCTCGAACTGCGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX603348             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACAG CGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAA TTCGTGTAAGTTGCGAACGATCTTTATCGCAGATGTTCTTGTGCAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGAGTGATTTCAGTTTACGCAGGGAAGTCACCACAGCAGTGACCGTTCACCTTTTAGAGTGGACCCCAAATTCGTGTATTTTATCAAGTTAAACAGCTACATTGTAGTGAGCATGATAGTGATACACGTACGGGACGTTGTGCAGAGACAGAGTGGCCTCCGATACCCTTTAGTCGAATGTAAGATCTGTCTGGATATACGCCTAACAACACGCAACTGACCCGACGTTTTCTGTTCAGGGCTCGAACTGCGTAATCATCCGCTCGTAGAGGATGTGTTTAACAGATATTGGAAGTTTGCTGAATTTACTCATCTGTTGGGTGTCCTGTTGGTACGTAGTTAGTGTACGAATCTCAGAACCATTGCGCTGAGTTCTGTGTCGTATACATTTCTCATGCTTTGGATTACGATCGACAGGAAATTGACCATTTTCTAATCCCGATCGGGTTTATATTTGGCCTGGAAGTGCTCACTGTTGCTGCTGGAGACGTGATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX467743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               caagaattcGGCACG AG GAGTGTACGAATCTCAGAACCATTGCGCTGAGTTCTGTGTCGTATACATTTCTCATGCTTTGGATTACGATCGACAGGAAATTGACCATTTTCTAATCCCGATCGGGTTTATATTTGGCCTGGAAGTGCTCACTGTTGCTGCTGGAGACGTGATCTGGCACGATATAGGGGAGAATTATAAATTCCTCCTAGCTCTAATCATTTGGTTCGGTAAGGCCCATAGACACACGTTATCTGATGTTTGCTGCGTGGGATCTTAAAGCGGTATTTGTTCTTTCAAACTACCGCTATGTAAAAGTGTACTTCTACTACATCATGTACATCCTACGGAAGTTGTTCCGAGCGAGGAATTGCAACGTTTCCGGGTCAGAATCACCCGCAAACGCCATCAGACGCATTATGAGGGAGTTAACTCAAACGAAAGATCGTACCGTTTCCCGGGATTCGGAATCAGATGCTGGGAACCCATTGGTCAAGGTGTAAGTGCTGTCTTTCCTGTTCTGTACAAAAATTACTTAAGGTTTTGAGCTTGAAATGGTAGCTCTCGAGCGAGCGGCTTGCGT                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX627258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCCCGATCGGGTTTATATTTGGCCTGGAAGTGCTCACTGTTGCTGCTGGAGACGTGATCTGGCACGATATAGGGGAGAATTATAAATTCCTCCTAGCTCTAATCATTTGGTTCGGTAAGGCCCATAGACACACGTTATCTGATGTTTGCTGCGTGGGATCTTAAAGCGGTATTTGTTCTTTCAAACTACCGCTATGTAAAAGTGTACTTCTACTACATCATGTACATCCTACGGAAGTTGTTCCGAGCGAGGAATTGCAACGTTTCCGGGTCAGAATCACCCGCAAACGCCATCAGACGCATTATGAGGGAGTTAACTCAAACGAAAGATCGTACCGTTTCCCGGGATTCGGAATCAGATGCTGGGAACCCATTGGTCAAGGTGTAAGTGCTGTCTTTCCTGTTCTGTACAAAAATTACTTAAGGTTTTGAGCTTGAAATGGTAGCTCTCGAGCGAGCGGCTTGCGTGAGTCACTGAGAGGGAAGGTCACATATCGCTCCCCAAACCAATGTTTGTCTGATGTACGTACGACATTTCGTAGTTATCGCATTAAAGCATCAAACATTGAAAACGCACCAAAACTGACGCCGGCGCACTACCCATTGATGAGACATTGACGATGTGAAAGAACTGTTGTTGTGATTGTGGAGTTGGTCGTAACCTTTATCTTGCAGTTGACTGTTTGAAGCACACGGAGCAGTTGTTGCCCGTCATGTGTACAGACGCGTGTGATTGACTTGAGTGTGTCAAGGCATGTCAAATTCAAGTCACAGCTNCCGAATAGTGCT]




>consensus_7949#0
GGCAGAATCGCCCGAGGTTCAAGCGCACGTTTAGTGAGAANCAGGAGTGACGTTACTACA
GCCATGGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAACGGCTGCCTTATAGTGCT
GCTGGTGGGGTTCTTTGTAGTCGTAAGCGCACACCGATGGCTCATGCAAATGCAAAACTG
GAGCGCGTATCCTTTCGTTGCGGGGCTTGAACTGCGCAATCATCCCGTCGTCGATGGAGT
GTTTCAGATTGTGTGGATTACGGCGGTAGCTTCGCTCTATCAGGCACTCTGGTTGGAAGT
GGAACTGTTGCTGTACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGC
CGGGGACGTGATCAAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCA
AGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAA
GCAGCTGTTTCGAACGAAGAATCGCAAATCATCTATCCCACCTGGAGCTACCGGTTACCC
ATTAGTCAGCGTACAGTAAGATGGAAAGAAACAGCGCGAGGGAGTTCCTTTACTGTACAG
TGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAATTCGTGTAAGTTGCGAACGAT
CTTTATCGCAGATGTTCTTGTGCAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCG
TGGTTTCAGTTTATGTAGGAAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGAC
CCCAAATTCGTGTATTTTATCAAGTTAAACAGCTACATTGTAGTGAGCATGATAGTGATA
CACGTACGGGACGTTGTGCAGAGGCAGAGTGGCCACCAATACCCTTTAGCCGAATGTAAG
ATCTGTCTGGATATACGCCTAACAACACGCAACTGACCCGACGTTTTCTGTTCAGGGCTC
GAACTGCGTAATCATCCGCTCGTAGAGGATGTGTTTAACAGATATTGGAAGTTTGCTGAA
TTTACTCATCTGTTGGGTGTCCTGTTGGTACGTAGTTAGTGTACGAATCTCAGAACCATT
GCGCTGAGTTCTGTGTCGTATACATTTCTCATGCTTTGGATTACGATCGACAGGAAATTG
ACCATTTTCTAATCCCGATCGGGTTTATATTTGGCCTGGAAGTGCTCACTGTTGCTGCTG
GAGACGTGATCTGGCACGATATAGGGGAGAATTATAAATTCCTCCTAGCTCTAATCATTT
GGTTCGGTAAGGCCCATAGACACACGTTATCTGATGTTTGCTGCGTGGGATCTTAAAGCG
GTATTTGTTCTTTCAAACTACCGCTATGTAAAAGTGTACTTCTACTACATCATGTACATC
CTACGGAAGTTGTTCCGAGCGAGGAATTGCAACGTTTCCGGGTCAGAATCACCCGCAAAC
GCCATCAGACGCATTATGAGGGAGTTAACTCAAACGAAAGATCGTACCGTTTCCCGGGAT
TCGGAATCAGATGCTGGGAACCCATTGGTCAAGGTGTAAGTGCTGTCTTTCCTGTTCTGT
ACAAAAATTACTTAAGGTTTTGAGCTTGAAATGGTAGCTCTCGAGCGAGCGGCTTGCGTG
AGTCACTGAGAGGGAAGGTCACATATCGCTCCCCAAACCAATGTTTGTCTGATGTACGTA
CGACATTTCGTAGTTATCGCATTAAAGCATCAAACATTGAAAACGCACCAAAACTGACGC
CGGCGCACTACCCATTGATGAGACATTGACGATGTGAAAGAACTGTTGTTGTGATTGTGG
AGTTGGTCGTAACCTTTATCTTGCAGTTGACTGTTTGAAGCACACGGAGCAGTTGTTGCC
CGTCATGTGTACAGACGCGTGTGATTGACTTGAGTGTGTCAAGGCATGTCAAATTCAAGT
CACAGCTNCCGAATAGTGCT

consensusID : consensus_7949#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1190
fasta sequence 
                              [CTCCAGGCAGATTGCCCCGAGGTGTTTAGTTGTCATCACGCGCACGTTAGTGAGAAGCAGGAGTGACGTTACTACAGCCATGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAACGGCTGCCTTATAGTGCTGCTGGTGGGGTNTCTTATGTAGTCGTAAGCGCACACCGATGGCTCATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGTATGCGGGGCTTGAACTGCGCAATCATNCCCGTCGTACGATGTGCAGTNGTNTTCAGATTTGTAGTAGGCATTNACGGCCGGTAGCCTNTCGCTCCTATCAGNGCACTACTGGGTTNGGCAAGTTGGGAACTNGTATTGCTGTAACCCCGATCGNGGTANCATTGCTACGGAGCTTGGGAAGCTTGCTTAGNCTAAGATNTGCCNGACCCGATGGGGACACNGCTTGATTCAAAAGGCGGCCTGGCACACCGNACTCGGAGGGGCCGCTGGCACGCGGCATNTTGGGTAGTAGNNCCCCCTTGGCCGGCCCCACNTCCGGCGGGATTCAAAAAAGCCAATTGGCGANAGAGCTTCCGNCATGGCTTTGGGCANATTTCAGGCCGCAAAACCGTTAAGCTCTCAACGNCCCGNGATTAACCCCATCATGTGCTNCACCCTTAAACCACAACCGGNGCCTNTGGTNAGCAATTCCCTCTATTGGCGAAAAGGCACGCAAGAGCGCACCTTGGGATAATCAGTANCCTGCGCAACAGCCGGGCGAACCAGNGGANACAATTTCCCCGGGGCCAAANNNAATTTCCGACAAGTTACCNTTTNACAGTTTCCGCGCCCACCAAANCCCCCTTGGAGCGAAAGCGAGCCAGTTAAAGCCAAGGNAGGATNTAAACGCGGCCNGAGGAGNTACACTTAAAAAGGAGCCATNCCCCCAAAAACGAGGNCNACGGGGACCNANTAAAACCACAGAAACGCTAGCGANTATACAAACCCCGGTCGGCCAAACCNTTGGGAGGGCACACCCCCCCCGGTGCTACACGAACAACCACCCACAAACGNNCACNCGACTGCCCACNNCAAAAGCTGCGGACGCGACAAAAGGCGCCACTTTAGATGACCACCCGGCATTAGATACTTTCAACCACCCCCCCCCNTGGGGGCNAGTCAACAGCCAAACANCGCGAGCAGNCGGCAATGCTA]

[+] EMBL AL693851             [CTCCAGGCAGATTGCCCCGAGGTGTTTAGTTGTCATCACGCGCACGTTAGTGAGAAGCAGGAGTGACGTTACTACAGCCATGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAACGGCTGCCTTATAGTGCTGCTGGTGGGGTNTCTTATGTAGTCGTAAGCGCACACCGATGGCTCATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGTATGCGGGGCTTGAACTGCGCAATCATNCCCGTCGTACGATGTGCAGTNGTNTTCAGATTTGTAGTAGGCATTNACGGCCGGTAGCCTNTCGCTCCTATCAGNGCACTACTGGGTTNGGCAAGTTGGGAACTNGTATTGCTGTAACCCCGATCGNGGTANCATTGCTACGGAGCTTGGGAAGCTTGCTTAGNCTAAGATNTGCCNGACCCGATGGGGACACNGCTTGATTCAAAAGGCGGCCTGGCACACCGNACTCGGAGGGGCCGCTGGCACGCGGCATNTTGGGTAGTAGNNCCCCCTTGGCCGGCCCCACNTCCGGCGGGATTCAAAAAAGCCAATTGGCGANAGAGCTTCCGNCATGGCTTTGGGCANATTTCAGGCCGCAAAACCGTTAAGCTCTCAACGNCCCGNGATTAACCCCATCATGTGCTNCACCCTTAAACCACAACCGGNGCCTNTGGTNAGCAATTCCCTCTATTGGCGAAAAGGCACGCAAGAGCGCACCTTGGGATAATCAGTANCCTGCGCAACAGCCGGGCGAACCAGNGGANACAATTTCCCCGGGGCCAAANNNAATTTCCGACAAGTTACCNTTTNACAGTTTCCGCGCCCACCAAANCCCCCTTGGAGCGAAAGCGAGCCAGTTAAAGCCAAGGNAGGATNTAAACGCGGCCNGAGGAGNTACACTTAAAAAGGAGCCATNCCCCCAAAAACGAGGNCNACGGGGACCNANTAAAACCACAGAAACGCTAGCGANTATACAAACCCCGGTCGGCCAAACCNTTGGGAGGGCACACCCCCCCCGGTGCTACACGAACAACCACCCACAAACGNNCACNCGACTGCCCACNNCAAAAGCTGCGGACGCGACAAAAGGCGCCACTTTAGATGACCACCCGGCATTAGATACTTTCAACCACCCCCCCCCNTGGGGGCNAGTCAACAGCCAAACANCGCGAGCAGNCGGCAATGCTA]




>consensus_7949#1
CTCCAGGCAGATTGCCCCGAGGTGTTTAGTTGTCATCACGCGCACGTTAGTGAGAAGCAG
GAGTGACGTTACTACAGCCATGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAACGG
CTGCCTTATAGTGCTGCTGGTGGGGTNTCTTATGTAGTCGTAAGCGCACACCGATGGCTC
ATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGTATGCGGGGCTTGAACTGCGCAATCA
TNCCCGTCGTACGATGTGCAGTNGTNTTCAGATTTGTAGTAGGCATTNACGGCCGGTAGC
CTNTCGCTCCTATCAGNGCACTACTGGGTTNGGCAAGTTGGGAACTNGTATTGCTGTAAC
CCCGATCGNGGTANCATTGCTACGGAGCTTGGGAAGCTTGCTTAGNCTAAGATNTGCCNG
ACCCGATGGGGACACNGCTTGATTCAAAAGGCGGCCTGGCACACCGNACTCGGAGGGGCC
GCTGGCACGCGGCATNTTGGGTAGTAGNNCCCCCTTGGCCGGCCCCACNTCCGGCGGGAT
TCAAAAAAGCCAATTGGCGANAGAGCTTCCGNCATGGCTTTGGGCANATTTCAGGCCGCA
AAACCGTTAAGCTCTCAACGNCCCGNGATTAACCCCATCATGTGCTNCACCCTTAAACCA
CAACCGGNGCCTNTGGTNAGCAATTCCCTCTATTGGCGAAAAGGCACGCAAGAGCGCACC
TTGGGATAATCAGTANCCTGCGCAACAGCCGGGCGAACCAGNGGANACAATTTCCCCGGG
GCCAAANNNAATTTCCGACAAGTTACCNTTTNACAGTTTCCGCGCCCACCAAANCCCCCT
TGGAGCGAAAGCGAGCCAGTTAAAGCCAAGGNAGGATNTAAACGCGGCCNGAGGAGNTAC
ACTTAAAAAGGAGCCATNCCCCCAAAAACGAGGNCNACGGGGACCNANTAAAACCACAGA
AACGCTAGCGANTATACAAACCCCGGTCGGCCAAACCNTTGGGAGGGCACACCCCCCCCG
GTGCTACACGAACAACCACCCACAAACGNNCACNCGACTGCCCACNNCAAAAGCTGCGGA
CGCGACAAAAGGCGCCACTTTAGATGACCACCCGGCATTAGATACTTTCAACCACCCCCC
CCCNTGGGGGCNAGTCAACAGCCAAACANCGCGAGCAGNCGGCAATGCTA

consensusID : consensus_7949#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 630
fasta sequence 
                              [CCGCCCACGCGTCCGCGTCGCTCTATCAGGCACTCTGGTTGGAAGTGGAGCTGTTGCTGTACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATCAAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAACGAAGAATCGCAAATCTTCTGTCCCACCTGGAGCTACCGATTACCCATTAGTCAGCGTACAGTAAGATGGAAAGAAACAGCGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAATTCGTGTAAGTTGCGAACGATCTTTATCGCAGATATTCTTGTACAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTGGTTTTGGTTTATGTAGGGAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCCCCAAATTCGTGTATTTTATTAAGTTAAACAGCTACATTGTAGTAAGCATGATAGTGATACACGTACGGGACGTTGTACAGAGGCAGAGTGGCCACCAGTACC]

[+] EMBL BM634119             [CCGCCCACGCGTCCGCGTCGCTCTATCAGGCACTCTGGTTGGAAGTGGAGCTGTTGCTGTACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATCAAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAACGAAGAATCGCAAATCTTCTGTCCCACCTGGAGCTACCGATTACCCATTAGTCAGCGTACAGTAAGATGGAAAGAAACAGCGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAATTCGTGTAAGTTGCGAACGATCTTTATCGCAGATATTCTTGTACAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTGGTTTTGGTTTATGTAGGGAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCCCCAAATTCGTGTATTTTATTAAGTTAAACAGCTACATTGTAGTAAGCATGATAGTGATACACGTACGGGACGTTGTACAGAGGCAGAGTGGCCACCAGTACC]




>consensus_7949#2
CCGCCCACGCGTCCGCGTCGCTCTATCAGGCACTCTGGTTGGAAGTGGAGCTGTTGCTGT
ACCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATCA
AGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGTCAAGATGGGGTCGTGT
GGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTCGAA
CGAAGAATCGCAAATCTTCTGTCCCACCTGGAGCTACCGATTACCCATTAGTCAGCGTAC
AGTAAGATGGAAAGAAACAGCGCGAGGGAGTTCCTTTACTGTACAGTGTAGTCGACACCT
AGCCGTATCTAGTCGTAATGGCAAATTCGTGTAAGTTGCGAACGATCTTTATCGCAGATA
TTCTTGTACAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTGGTTTTGGTTTAT
GTAGGGAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCCCCAAATTCGTGT
ATTTTATTAAGTTAAACAGCTACATTGTAGTAAGCATGATAGTGATACACGTACGGGACG
TTGTACAGAGGCAGAGTGGCCACCAGTACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7949#0      -----------------GGCAGAATCGCCCGAGGTTCAAGCGCACGTTTAGTGAGAANCA 43
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      CTCCAGGCAGATTGCCCCGAGGTGTTTAGTTGTCATCACGCGCACGTT-AGTGAGAAGCA 59
                                                                                  

consensus_7949#0      GGAGTGACGTTACTACAGCCATGGCTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAAC 103
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      GGAGTGACGTTACTACAGCCATG-CTGCAGTCCAAGTTCGTTCTGTATATCAAATTTAAC 118
                                                                                  

consensus_7949#0      GGCTGCCTTATAGTGCTGCTGGTGGGGTTCTTT--GTAGTCGTAAGCGCACACCGATGGC 161
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      GGCTGCCTTATAGTGCTGCTGGTGGGGTNTCTTATGTAGTCGTAAGCGCACACCGATGGC 178
                                                                                  

consensus_7949#0      TCATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGT-TGCGGGGCTTGAACTGCGCAAT 220
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      TCATGCAAATGCAAAACTGGAGCGCGTATCCTTTCGTATGCGGGGCTTGAACTGCGCAAT 238
                                                                                  

consensus_7949#0      CATCCC-GTCGT------CGATGGAGTGTTTCAGATTGT----GTGGATTACGG-CGGTA 268
consensus_7949#2      --------------------------------------------CCGCCCACG--CGTCC 14
consensus_7949#1      CATNCCCGTCGTACGATGTGCAGTNGTNTTCAGATTTGTAGTAGGCATTNACGGCCGGTA 298
                                                                        ***  **   

consensus_7949#0      GC--TTCGCTC-TATCAGG-CACTCT--GGTTGG--AAGT--GGAACTG---TTGCTGTA 315
consensus_7949#2      GC--GTCGCTC-TATCAGG-CACTCT--GGTTGG--AAGT--GGAGCTG---TTGCTGTA 61
consensus_7949#1      GCCTNTCGCTCCTATCAGNGCACTACTGGGTTNGGCAAGTTGGGAACTNGTATTGCTGTA 358
                      **   ****** ******  ****    **** *  ****  *** **    ********

consensus_7949#0      --CCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATC 373
consensus_7949#2      --CCCGATCGGGTTCATGCTCGGGCTGGAAGTGCTGCTAGTTGCCGCCGGGGACGTGATC 119
consensus_7949#1      ACCCCGATCGNGGTANCATT--GCTACGGAGCTTGGGAAGCT--TGCTTAGNCTAAGATN 414
                        ******** * *     *  *    * **    *  ** *   **   *     *** 

consensus_7949#0      AAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGT--CAAGATGGGGTCG 431
consensus_7949#2      AAGCGCTGGAACGATGAGGCGGAGGATTGTTTCCTGCGCAGGGGT--CAAGATGGGGTCG 177
consensus_7949#1      TGCCN--GACCCGATGGGGACACNGCTTGATTCAAAAGGCGGCCTGGCACACCGNACTCG 472
                         *   *   ***** **     * *** ***    *  **  *  **    *   ***

consensus_7949#0      TGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTC 491
consensus_7949#2      TGTGGATCGCACTATTAGCGTACTTTTACTACACGCTGTACATCTTGAAGCAGCTGTTTC 237
consensus_7949#1      GAGGGGCCGCTGGCACGCGGCATNTTGGGTA---GTAGNNCCCCCTTGGCCGGCCCCACN 529
                         **  ***         * *  **   **   *  *  *  * *    * **      

consensus_7949#0      GAACGAAGAATCGCAAATCATCTATCCCACCTGGAGCTACCGGTTACCCATTAGTCAGCG 551
consensus_7949#2      GAACGAAGAATCGCAAATCTTCTGTCCCACCTGGAGCTACCGATTACCCATTAGTCAGCG 297
consensus_7949#1      TCCGGCGGGATTCAAAAAAGCCAATTGGCGANAGAGCTTCCGNCATGGCTTTGGGCANAT 589
                          *  * **   ***    *  *        ***** ***      * ** * **   

consensus_7949#0      TACAG----TAAGATGGAAAGA-----AACAGCGCGAGGGAGTTCCTTTACTGTACAGTG 602
consensus_7949#2      TACAG----TAAGATGGAAAGA-----AACAGCGCGAGGGAGTTCCTTTACTGTACAGTG 348
consensus_7949#1      TTCAGGCCGCAAAACCGTTAAGCTCTCAACGNCCCGNGATTAACCCCATCATGTGCTNCA 649
                      * ***     ** *  *  *       ***  * ** *      **  *  *** *    

consensus_7949#0      TAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAATTCGTGTAAGTTGCGAACGATCT 662
consensus_7949#2      TAGTCGACACCTAGCCGTATCTAGTCGTAATGGCAAATTCGTGTAAGTTGCGAACGATCT 408
consensus_7949#1      CCCTTAAACCACAACCGGNGCCTNTGGTNA--GCAATTCCCTCTAT-TGGCGAAAAGGCA 706
                         *  *  *  * ***   *   * ** *  **** * * * **  * *****    * 

consensus_7949#0      TTATCGCAGATGTTCTTGTGCAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTG 722
consensus_7949#2      TTATCGCAGATATTCTTGTACAGGGTGCACCTTTCGGGGCAGACCTTGGGCTGGAGCGTG 468
consensus_7949#1      CGCAAGAGCGCACCTTGGGATAATCAGTANCCTGCGCAACAG---CCGGGCGAACCAGNG 763
                           *         * *   *    * * * * **   ***     ****      * *

consensus_7949#0      GTTTCAGTTTATGTAGGAAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCC 782
consensus_7949#2      GTTTTGGTTTATGTAGGGAAGTCACCATAGTAGTGACCGGCCACCTTCCAGAATGGACCC 528
consensus_7949#1      GANACAATTTCCCCGGGGCCAAANNNA-ATTTCCGACAAGTTACCNTTTN--ACAGTTTC 820
                      *      ***     **         * * *   ***  *  *** *     *  *   *

consensus_7949#0      C-AAATTCGTGTATTTTATCAAGTTAAACAGCTACATTGTAGTGAGCATGATAGTGATAC 841
consensus_7949#2      CCAAATTCGTGTATTTTATTAAGTTAAACAGCTACATTGTAGTAAGCATGATAGTGATAC 588
consensus_7949#1      CGCGCCCACCAAANCCCCCTTGGAGCGAAAGCGAGCCAGTTAAAGCCAAGGNAG-GATNT 879
                      *           *         *    * *** *    **      ** *  ** ***  

consensus_7949#0      ACGTACGGGACGTTGTGCAGAGGCAGAGTGGCCACCAATACCCTTTAGCCGAATGTAAGA 901
consensus_7949#2      ACGTACGGGACGTTGTACAGAGGCAGAGTGGCCACCAGTACC------------------ 630
consensus_7949#1      AAACGCGGCCNGAGGAGNTACACTTAAAAAGGAGCCATNCCCCCAAAAACGAGGNCNACG 939
                      *    ***   *  *           *   *   ***   **                  

consensus_7949#0      TCTGTCTGGATATACGCCTAACAACACGCAACTGACCCGACGTTTTCTGTTCAGGGCTCG 961
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      GGGACCNAN---TAAAACCACAGAAACGCTAGCGANTATACAAACCCCGGTCGGCCAAAC 996
                                                                                  

consensus_7949#0      AACTGCGTAATCATCCGCTCGTAGAGGATGTGTTTAACAGATATTGGAAGTTTGCTGAAT 1021
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      CNTTGGGAGGGCACACCCCCCCCGGTGCTACACGAACAACCACCCACAAACGNNC---AC 1053
                                                                                  

consensus_7949#0      TTACTCATCTGTTGGGTGTCCTGTTGGTACGTAGTTAGTGTACGAATCTCAGAACCATTG 1081
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      NCGACTGCCCACNNCAAAAGCTGCGGACGCGACAAAAGGCGCCACTTTAGATGACCACCC 1113
                                                                                  

consensus_7949#0      CGCTGAGTTCTGTGTCGTATACATTTCTCATGCTTTGGATTACGATCGACAGGAAAT-TG 1140
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      GGCATTAGATACTTTCAACCACCCCCCCCCNTGGGGGCNAGTCAACAGCCAAACANCGCG 1173
                                                                                  

consensus_7949#0      ACCATTTTCTAATCCCGATCGGGTTTATATTTGGCCTGGAAGTGCTCACTGTTGCTGCTG 1200
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      AGCAGNCGGCAATGCTA------------------------------------------- 1190
                                                                                  

consensus_7949#0      GAGACGTGATCTGGCACGATATAGGGGAGAATTATAAATTCCTCCTAGCTCTAATCATTT 1260
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      GGTTCGGTAAGGCCCATAGACACACGTTATCTGATGTTTGCTGCGTGGGATCTTAAAGCG 1320
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      GTATTTGTTCTTTCAAACTACCGCTATGTAAAAGTGTACTTCTACTACATCATGTACATC 1380
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      CTACGGAAGTTGTTCCGAGCGAGGAATTGCAACGTTTCCGGGTCAGAATCACCCGCAAAC 1440
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      GCCATCAGACGCATTATGAGGGAGTTAACTCAAACGAAAGATCGTACCGTTTCCCGGGAT 1500
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      TCGGAATCAGATGCTGGGAACCCATTGGTCAAGGTGTAAGTGCTGTCTTTCCTGTTCTGT 1560
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      ACAAAAATTACTTAAGGTTTTGAGCTTGAAATGGTAGCTCTCGAGCGAGCGGCTTGCGTG 1620
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      AGTCACTGAGAGGGAAGGTCACATATCGCTCCCCAAACCAATGTTTGTCTGATGTACGTA 1680
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      CGACATTTCGTAGTTATCGCATTAAAGCATCAAACATTGAAAACGCACCAAAACTGACGC 1740
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      CGGCGCACTACCCATTGATGAGACATTGACGATGTGAAAGAACTGTTGTTGTGATTGTGG 1800
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      AGTTGGTCGTAACCTTTATCTTGCAGTTGACTGTTTGAAGCACACGGAGCAGTTGTTGCC 1860
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      CGTCATGTGTACAGACGCGTGTGATTGACTTGAGTGTGTCAAGGCATGTCAAATTCAAGT 1920
consensus_7949#2      ------------------------------------------------------------
consensus_7949#1      ------------------------------------------------------------
                                                                                  

consensus_7949#0      CACAGCTNCCGAATAGTGCT 1940
consensus_7949#2      --------------------
consensus_7949#1      --------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)