cluster # 8074

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Anopheles gambiae
cluster # 8074 cluster # 8074 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8074#0 length = 2090 sequences # 6
consensus_8074#1 length = 1088 sequences # 1

consensus_8074#2 length = 629 sequences # 1
consensus_8074#3 length = 172 sequences # 1

consensusID : consensus_8074#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2090
fasta sequence

                              [CCGCGAGCGCGTTGGAATGCGCAGTTAATTGTTGTAGTCCGTCTGAAGCGTGTCATTCTTTTTATCATTCTTTACCCATCCTAGAGCGACCGGAGTACGCTAGAACGGAACGGCATTTTTCGAAGAAAGTGACGCACGCGAACGTTTCCACGACAAGATAGCTAATCAAGAAAGTGCAAAACAGAACGCAGCAAGTGCAAAAAACAAAAACCCGTGACAAAACAGTAGTGCGCAAAGTTCTTAGTATTGGATTGTACTTTTCTATTTTGCTTTATGCATTTTGCTCTTGCAATCGAGCTAATGTAACCGATTGGACGGTTGCTGAAGCTTGCTGTGTAGAGAGCGGCATTATCTGACGAAACCAATTAGCTCGGTGCATGCTGCCGCGTCATGACAGCGGAAACGTTGAAACCATTTCTCAATCTACCGAACGCGACGGCCGGCGATCTGAAGGCGCACTGTGCGCAAAAGTCCGCCGTCAAGCGCGGCCTGCTTGCGCTCGGATGCATTCTGGCGGCGACCCTTTGCTGTGCGCTCATCGGTGTGCAGATCTGGCACTTGAACAAGACGGCCGCACTGCAGCGGGAAGTCGATGACCTG-AAGCAGCAACTGTACCTACGGGCTCGCGAATTCAACGAATACGAGTTCGACAACGAGCTGTTCGACGGGCATGATGAGTACGTGTACGAACCGGACCTGGATCCGGATATGGTCGAGGATGGCCACCGGCGCGAAACGGAAATGAGCGAGAGTGGTTTGTCCAGCAGCGGCATGCACGAAGAGGACGAAGACATCGAGGGCAGCGAGGAAGTGGGCGAGGAGGAGGAGGAGCAGGAGGAACGGGAAAACCTTGGCCTCGAGGAGCTGAAGGAAACGAACGAGGACGTCGAGGACGGCGAAGAGGACGACGGTATACTGATTGACGACACTGTCGACATGAGCGTGTCGGCGTCCGCGGCCAGTGGCAAGCGCCGAGCACGGTCCATTTCCGGTGTGACCCGGCAGGGCGTACCGATTATCGACGAGCCGTACGTACCGCGCCGGAACCGCACTCGGCATCCGCACCGGATCTTTGAGCAGTTGCGCCAGCGGCCGGAAGAGCTAGTCACACCACCGACGTCGGGCGAGATGTTCCGCTGGGATGTAGAAAATCGCAAAACACACACCGCCTCCCACAGCCAGCAGTCGTACGGGTCGATCAGCATAAGACCGTACCAGCACGAGATGCATCAACTTCGGGAACATCACAGCACCACCACGCCGATGCCCGTGTCGTACGGTTCACGCTCCGGTGTAAGGCACCACTCGCGCAATGAGCTGAACGCTGGAAATCCGACTAAACCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCATCAGCAACAGCGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTTGCCAAGGGGCTGCATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGCCATCGCGATTGGACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACCTTTGCGTTCGACGGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCTCAGGTGACGTACGACAACGAGCACGGCAACAACGGCTACAAGGTGATGGTCGGCGGCAAAAAGCATCTCTCCTGCACCGTCCATGTGCAGGGACAGAACACGAACGCCTGCTTTACGGCGGGATTGACGGAAATCGAAACCGCCGGCACGACGGTCGCGATCGANGACTTTGACCACGGTCGGCACCACGTCATGTACCCGGAGAAAACGTTCTTCGGCGTGTACAAGGTGGGCCGGCTGCCGCCACACACCGGCCCGAACGGGAGACTGCGCCAAGCCCGGAAGGTGCTGCCTTAATGCGGCAGCGGAAACAGGGCGTGAAGGCGATTGTGAAGCGATTGTAAACTTTATGTACTGTATTT]

[+] EMBL BM611423             [CCGCGAGCGCGTTGGAATGCGCAGTTAATTGTTGTAGTCCGTCTGAAGCGTGTCATTCTTTTTATCATTCTTTACCCATCCTAGAGCGACCGGAGTACGCTAGAACGGAACGGCATTTTTCGAAGAAAGTGACGCACGCGAACGTTTCCACGACAAGATAGCTAATCAAGAAAGTGCAAAACAGAACGCAGCAAGTGCAAAAAACAAAAACCCGTGACAAAACAGTAGTGCGCAAAGTTCTTAGTATTGGATTGTACTTTTCTATTTTGCTTTATGCATTTTGCTCTTGCAATCGAGCTAATGTAACCGATTGGACGGTTGCTGAAGCTTGCTGTGTAGAGAGCGGCATTATCTGACGAAACCAATTAGCTCGGTGCATGCTGCCGCGTCATGACAGCGGAAACGTTGAAACCATTTCTCAATCTACCGAACGCGACGGCCGGCGATCTGAAGGCGCACTGTGCGCAAAAGTCCGCCGTCAAGCGCGGCCTGCTTGCGCTCGGATGCATTCTGGCGGCGACCCTTTGCTGTGCGCTCATCGGTGTGCAGATCTGGCACTTGAACAAGACGGCCGCACTGCAGCGGGAAGTCGATGACCTGCAAGCAGCAACTGTACCTACGGGCTCGCGAATTCAACGAATACGAGTTTGACAACGAGCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX621522             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGCAAAAGTCCGCCGTCAAGCGCGGCCTGCTTGCGCTCGGATGCATTCTGGCGGCGACCCTTTGCTGTGCGCTCATCGGTGTGCAGATCTGGCACTTGAACAAGACGGCCGCACTGCAGCGGGAAGTCGATGACCTG AAGCAGCAACTGTACCTACGGGCTCGCGAATTCAACGAATACGAGTTCGACAACGAGCTGTTCGACGGGCATGATGAGTACGTGTACGAACCGGACCTGGATCCGGATATGGTCGAGGATGGCCACCGGCGCGAAACGGAAATGAGCGAGAGTGGTTTGTCCAGCAGCGGCATGCACGAAGAGGACGAAGACATCGAGGGCAGCGAGGAAGTGGGCGAGGAGGAGGAGGAGCAGGAGGAACGGGAAAACCTTGGCCTCGAGGAGCTGAAGGAAACGAACGAGGACGTCGAGGACGGCGAAGAGGACGACGGTATACTGATTGACGACACTGTCGACATGAGCGTGTCGGCGTCCGCGGCCAGTGGCAAGCGCCGAGCACGGTCCATTTCCGGTGTGACCCGGCAGGGCGTACCGATTATCGACGAGCCGTACGTACCGCGCCGGAACCGCACTCGGCATCCGCACCGGATCTTTGAGCAGTTGCGCCAGCGGCCGGAAGAGCTAGTCACACCACCGACGTCGGGCGAGATGTTCCGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM613604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgCTGGCACTTGAACAAGACGGCCGCACTGCAGCGGGAAGTCGATGACCTG AAGCAGCAACTGTACCTACGGGCTCGCGAATTCAACGAATACGAGTTCGACAACGAGCTGTTCGACGGGCATGATGAGTACGTGTACGAACCGGACCTGGATCCGGATATGGTCGAGGATGGCCACCGGCGCGAAACGGAAATGAGCGAGAGTGGTTTGTCCAGCAGCGGCATGCACGAAGAGGACGAAGACATCGAGGGCAGCGAGGAAGTGGGCGAGGAGGAGGAGGAGCAGGAGGAACGGGAAAACCTTGGCCTCGAGGAGCTGAAGGAAACGAACGAGGACGTCGAGGACGGCGAACAGGACGACGGTATACTGATTGACGACACTGTCGACATGAGCGTGTCGGCGTCCGCGGCCGGTGGCAAGCGCCGAGCACGGTCCATTTCCGGTGTGACCCGGCAGGGCGTACCGATTGTCGACGAGCCGTACGTACCGCGCCGGAACCGCACTCGGCATCCGCACCGGATCTTTGAGCAGTTGCGCCAGCGGCCGGAAGAGCTAGTCACACCACCGACGTCGGGCGAGATGTTCCGCTGGGATGTAGAAAATCGCAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX627945             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGGCCTCGAGGAGCTGAAGGAAACGAACGAGGACGTCGAGGACGGCGAAGAGGACGACGGTATACTGATTGACGACACTGTCGACATGAGCGTGTCGGCGTCCGCGGCCAGTGGCAAGCGCCGAGCACGGTCCATTTCCGGTGTGACCCGGCAGGGCGTACCGATTATCGACGAGCCGTACGTACCGCGCCGGAACCGCACTCGGCATCCGCACCGGATCTTTGAGCAGTTGCGCCAGCGGCCGGAAGAGCTAGTCACACCACCGACGTCGGGCGAGATGTTCCGCTGGGATGTAGAAAATCGCAAAACACACACCGCCTCCCACAGCCAGCAGTCGTACGGGTCGATCAGCATAAGACCGTACCAGCACGAGATGCATCAACTTCGGGAACATCACAGCACCACCACGCCGATGCCCGTGTCGTACGGTTCACGCTCCGGTGTAAGGCACCACTCGCGCAATGAGCTGAACGCTGGAAATCCGACTAAACCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCATCAGCAACAGCGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX620580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATAAGACCGTACCAGCACGAGATGCATTAACTTCGGGAACATCACAGCACCACCACGCCGATGCCCGTGTCGTACGGTTCACACTCCGGTGTAAGGCACCACTCGCGCAATGAGCTGAACGCTGGAAATCCGACTAAACCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCATCAGCAACAGCGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTTGCCAAGGGGCTGCATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGCCATCGCGATTGGACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACCTTTGCGTTCGACGGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCTCAGGTGACGTACGACAACGAGCACGGCAACAACGGCTACAAGGTGATGGTCGGCGGCAAAAAGCATCTCTCCTGCACCGTCCATGTGCAGGGACAGAACACGAACGCCTGCTTTACGGCGGGATTGACGGAAATCGAAACCGCCGGCACGACGGTCGCGATCGANGACTTTGACCACGGTCGGCACCACGTCATGTACCCGG                                                                                                                                                                ]
[+] EMBL BX604009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCACGACGGTCGCGATCGAGGACTTTGACCACGGTCGGCACCACGTCATGTACCCGGAGAAAACGTTCTTCGGCGTGTACAAGGTGGGCCGGCTGCCGCCACACACCGGCCCGAACGGGAGACTGCGCCAAGCCCGGAAGGTGCTGCCTTAATGCGGCAGCGGAAACAGGGCGTGAAGGCGATTGTGAAGCGATTGTAAACTTTATGTACTGTATTT]




>consensus_8074#0
CCGCGAGCGCGTTGGAATGCGCAGTTAATTGTTGTAGTCCGTCTGAAGCGTGTCATTCTT
TTTATCATTCTTTACCCATCCTAGAGCGACCGGAGTACGCTAGAACGGAACGGCATTTTT
CGAAGAAAGTGACGCACGCGAACGTTTCCACGACAAGATAGCTAATCAAGAAAGTGCAAA
ACAGAACGCAGCAAGTGCAAAAAACAAAAACCCGTGACAAAACAGTAGTGCGCAAAGTTC
TTAGTATTGGATTGTACTTTTCTATTTTGCTTTATGCATTTTGCTCTTGCAATCGAGCTA
ATGTAACCGATTGGACGGTTGCTGAAGCTTGCTGTGTAGAGAGCGGCATTATCTGACGAA
ACCAATTAGCTCGGTGCATGCTGCCGCGTCATGACAGCGGAAACGTTGAAACCATTTCTC
AATCTACCGAACGCGACGGCCGGCGATCTGAAGGCGCACTGTGCGCAAAAGTCCGCCGTC
AAGCGCGGCCTGCTTGCGCTCGGATGCATTCTGGCGGCGACCCTTTGCTGTGCGCTCATC
GGTGTGCAGATCTGGCACTTGAACAAGACGGCCGCACTGCAGCGGGAAGTCGATGACCTG
AAGCAGCAACTGTACCTACGGGCTCGCGAATTCAACGAATACGAGTTCGACAACGAGCTG
TTCGACGGGCATGATGAGTACGTGTACGAACCGGACCTGGATCCGGATATGGTCGAGGAT
GGCCACCGGCGCGAAACGGAAATGAGCGAGAGTGGTTTGTCCAGCAGCGGCATGCACGAA
GAGGACGAAGACATCGAGGGCAGCGAGGAAGTGGGCGAGGAGGAGGAGGAGCAGGAGGAA
CGGGAAAACCTTGGCCTCGAGGAGCTGAAGGAAACGAACGAGGACGTCGAGGACGGCGAA
GAGGACGACGGTATACTGATTGACGACACTGTCGACATGAGCGTGTCGGCGTCCGCGGCC
AGTGGCAAGCGCCGAGCACGGTCCATTTCCGGTGTGACCCGGCAGGGCGTACCGATTATC
GACGAGCCGTACGTACCGCGCCGGAACCGCACTCGGCATCCGCACCGGATCTTTGAGCAG
TTGCGCCAGCGGCCGGAAGAGCTAGTCACACCACCGACGTCGGGCGAGATGTTCCGCTGG
GATGTAGAAAATCGCAAAACACACACCGCCTCCCACAGCCAGCAGTCGTACGGGTCGATC
AGCATAAGACCGTACCAGCACGAGATGCATCAACTTCGGGAACATCACAGCACCACCACG
CCGATGCCCGTGTCGTACGGTTCACGCTCCGGTGTAAGGCACCACTCGCGCAATGAGCTG
AACGCTGGAAATCCGACTAAACCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAG
GCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCATCAGCAACAGCGATTCCCCAAG
GTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGG
TTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTTGCCAAGGGGCTG
CATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGCCATCGCGATTGG
ACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACCTTTGCGTTCGAC
GGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCTCAGGTGACGTAC
GACAACGAGCACGGCAACAACGGCTACAAGGTGATGGTCGGCGGCAAAAAGCATCTCTCC
TGCACCGTCCATGTGCAGGGACAGAACACGAACGCCTGCTTTACGGCGGGATTGACGGAA
ATCGAAACCGCCGGCACGACGGTCGCGATCGANGACTTTGACCACGGTCGGCACCACGTC
ATGTACCCGGAGAAAACGTTCTTCGGCGTGTACAAGGTGGGCCGGCTGCCGCCACACACC
GGCCCGAACGGGAGACTGCGCCAAGCCCGGAAGGTGCTGCCTTAATGCGGCAGCGGAAAC
AGGGCGTGAAGGCGATTGTGAAGCGATTGTAAACTTTATGTACTGTATTT

consensusID : consensus_8074#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1088
fasta sequence

                              [ATNCCCGAGGTTATCCGCGCGAACGCACAACCGTGCGACTGTATCCCGTGCTGCAACGGCTGCTAATTAAAATCGGTCTTTATTTGCCTTTTCCATGGTGCTGCTGGTGCATCTGTCAACGACGTTTACAACCGAACCGTTTGCACACTGGATGCTTGGCACCGGTATTGCGCTCGGTGTTGGTTTGTGATGGTTTGTGCCATTGCTGTGGATTTGACTGTGAAATCTGAAACCTGCCTGGCACTGACTGTGTCTGCTGATCTGAGTGACTTTGACCACTGGGTCTGNGCACCACGTCATGTACCCTGGAGAAAACGTTCTTCGGGCGTGTACAAGGTGGGCCTGGTTGCCAACTGACACCTGGGCCGAACTGGGAGACTTGGCCAAGCCCGGAAGGTGTCTTGCCTTAATTGCTTTGGCAGGCGGGCGTGAATGTGCGACTCTTGTTGAAAGCGGTTTGTAAAACTTTATTGTACTTGTTAATTTCTGGGCATTGTGTACCTTGTATTGTTGTTGTTGTTGAGAAGAAAGGGTGACAGTCAAAGACAGGAAGGACACAGAAACGAAGCAGTCAGCAGGCCAAATTGGGTTAGGAAACAGTGCCACACATTTGTTCACACTTTATTTGCAGATCNGCGTACTAGGTTGGTGTGGTAAGGCAACACGCTCGCANATGTACGGTAAGGCATTGTTGTAAGGCGTCTCCTCTAATGTAATTTATTTGTACCCGTCTCATCCCGGGTGTGTTCTGGCCGAACGATAATACACCCCACTTTTAATACTTAACTATCCTAANATTACTAAAAACGTTCCCCGTAACAGTAAGGCATTCCTTGCTTGGCCTTGGCCAATTAAATNAACTAAACGTTGGGTAACTGGGAATTCCGGCCCCTACCGTTGGTTNATGGCAATTAAGCAACANATNGTTAACCTTGGCANATTGGTTAANGCTCCANACAAATTTCGAGCCCATAGNAGTCAAGATCAGGCAGAACTGGGAACAGAACACCCCGTTCAGCGGAGCATCNAAACCAANTTTNCCAATTAACATCNTCCTCCAAATNNTCGGCCGGGGGTTCAAAATCTGG]

[+] EMBL AL931367             [ATNCCCGAGGTTATCCGCGCGAACGCACAACCGTGCGACTGTATCCCGTGCTGCAACGGCTGCTAATTAAAATCGGTCTTTATTTGCCTTTTCCATGGTGCTGCTGGTGCATCTGTCAACGACGTTTACAACCGAACCGTTTGCACACTGGATGCTTGGCACCGGTATTGCGCTCGGTGTTGGTTTGTGATGGTTTGTGCCATTGCTGTGGATTTGACTGTGAAATCTGAAACCTGCCTGGCACTGACTGTGTCTGCTGATCTGAGTGACTTTGACCACTGGGTCTGNGCACCACGTCATGTACCCTGGAGAAAACGTTCTTCGGGCGTGTACAAGGTGGGCCTGGTTGCCAACTGACACCTGGGCCGAACTGGGAGACTTGGCCAAGCCCGGAAGGTGTCTTGCCTTAATTGCTTTGGCAGGCGGGCGTGAATGTGCGACTCTTGTTGAAAGCGGTTTGTAAAACTTTATTGTACTTGTTAATTTCTGGGCATTGTGTACCTTGTATTGTTGTTGTTGTTGAGAAGAAAGGGTGACAGTCAAAGACAGGAAGGACACAGAAACGAAGCAGTCAGCAGGCCAAATTGGGTTAGGAAACAGTGCCACACATTTGTTCACACTTTATTTGCAGATCNGCGTACTAGGTTGGTGTGGTAAGGCAACACGCTCGCANATGTACGGTAAGGCATTGTTGTAAGGCGTCTCCTCTAATGTAATTTATTTGTACCCGTCTCATCCCGGGTGTGTTCTGGCCGAACGATAATACACCCCACTTTTAATACTTAACTATCCTAANATTACTAAAAACGTTCCCCGTAACAGTAAGGCATTCCTTGCTTGGCCTTGGCCAATTAAATNAACTAAACGTTGGGTAACTGGGAATTCCGGCCCCTACCGTTGGTTNATGGCAATTAAGCAACANATNGTTAACCTTGGCANATTGGTTAANGCTCCANACAAATTTCGAGCCCATAGNAGTCAAGATCAGGCAGAACTGGGAACAGAACACCCCGTTCAGCGGAGCATCNAAACCAANTTTNCCAATTAACATCNTCCTCCAAATNNTCGGCCGGGGGTTCAAAATCTGG]




>consensus_8074#1
ATNCCCGAGGTTATCCGCGCGAACGCACAACCGTGCGACTGTATCCCGTGCTGCAACGGC
TGCTAATTAAAATCGGTCTTTATTTGCCTTTTCCATGGTGCTGCTGGTGCATCTGTCAAC
GACGTTTACAACCGAACCGTTTGCACACTGGATGCTTGGCACCGGTATTGCGCTCGGTGT
TGGTTTGTGATGGTTTGTGCCATTGCTGTGGATTTGACTGTGAAATCTGAAACCTGCCTG
GCACTGACTGTGTCTGCTGATCTGAGTGACTTTGACCACTGGGTCTGNGCACCACGTCAT
GTACCCTGGAGAAAACGTTCTTCGGGCGTGTACAAGGTGGGCCTGGTTGCCAACTGACAC
CTGGGCCGAACTGGGAGACTTGGCCAAGCCCGGAAGGTGTCTTGCCTTAATTGCTTTGGC
AGGCGGGCGTGAATGTGCGACTCTTGTTGAAAGCGGTTTGTAAAACTTTATTGTACTTGT
TAATTTCTGGGCATTGTGTACCTTGTATTGTTGTTGTTGTTGAGAAGAAAGGGTGACAGT
CAAAGACAGGAAGGACACAGAAACGAAGCAGTCAGCAGGCCAAATTGGGTTAGGAAACAG
TGCCACACATTTGTTCACACTTTATTTGCAGATCNGCGTACTAGGTTGGTGTGGTAAGGC
AACACGCTCGCANATGTACGGTAAGGCATTGTTGTAAGGCGTCTCCTCTAATGTAATTTA
TTTGTACCCGTCTCATCCCGGGTGTGTTCTGGCCGAACGATAATACACCCCACTTTTAAT
ACTTAACTATCCTAANATTACTAAAAACGTTCCCCGTAACAGTAAGGCATTCCTTGCTTG
GCCTTGGCCAATTAAATNAACTAAACGTTGGGTAACTGGGAATTCCGGCCCCTACCGTTG
GTTNATGGCAATTAAGCAACANATNGTTAACCTTGGCANATTGGTTAANGCTCCANACAA
ATTTCGAGCCCATAGNAGTCAAGATCAGGCAGAACTGGGAACAGAACACCCCGTTCAGCG
GAGCATCNAAACCAANTTTNCCAATTAACATCNTCCTCCAAATNNTCGGCCGGGGGTTCA
AAATCTGG

consensusID : consensus_8074#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 629
fasta sequence

                              [CCGCGGACGCGTGGGAGGCACCACTCGCGCAATGAGCTGAACGCTGGAAATCCGACTAAACCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCAGCACCAGCATCAGCAGCAGCGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTTGCCAAGGGGCTGCATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGCCATCGCGATTGGACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACCTTTGCGTTCGACGGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCTCAGGTGACGTACGACAACGAGCACGGCAACAACGGCTACAAGGTGATGGTCGGAGGCAAAAAGCATCTCTCCTGCACCGTCCACGTGCAGGGGCAAAACACGAACGCCTGCTTTACGGCGGGATTGACGGAAATCGAAACCGCCGGCACGACGGTCGCGATCGAGGACTTTGA]

[+] EMBL BM615338             [CCGCGGACGCGTGGGAGGCACCACTCGCGCAATGAGCTGAACGCTGGAAATCCGACTAAACCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCAGCACCAGCATCAGCAGCAGCGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTTGCCAAGGGGCTGCATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGCCATCGCGATTGGACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACCTTTGCGTTCGACGGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCTCAGGTGACGTACGACAACGAGCACGGCAACAACGGCTACAAGGTGATGGTCGGAGGCAAAAAGCATCTCTCCTGCACCGTCCACGTGCAGGGGCAAAACACGAACGCCTGCTTTACGGCGGGATTGACGGAAATCGAAACCGCCGGCACGACGGTCGCGATCGAGGACTTTGA]




>consensus_8074#2
CCGCGGACGCGTGGGAGGCACCACTCGCGCAATGAGCTGAACGCTGGAAATCCGACTAAA
CCGCCGGCACAGATACTGAACCGCATGAGCCGCGTTCAGGCAACGGGCGAAAACATGCGA
AAGCAGCTCCAGCAGCAGCACCAGCATCAGCAGCAGCGATTCCCCAAGGTGGTGGGAAAT
CCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAGTCACGCGTTCGGTTGCGGCAACGC
AAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTTGCCAAGGGGCTGCATCTGGTAAAG
CAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGCCATCGCGATTGGACCGCGAAGGAC
AATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACCTTTGCGTTCGACGGCGAGCAGCTT
ACCATCAACGAGCCCGGCCTGTACTACCTTTACGCTCAGGTGACGTACGACAACGAGCAC
GGCAACAACGGCTACAAGGTGATGGTCGGAGGCAAAAAGCATCTCTCCTGCACCGTCCAC
GTGCAGGGGCAAAACACGAACGCCTGCTTTACGGCGGGATTGACGGAAATCGAAACCGCC
GGCACGACGGTCGCGATCGAGGACTTTGA

consensusID : consensus_8074#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 172
fasta sequence

                              [ACAGCACCACCACGCCGAGGCGTGTGTGGGAGGGTTCACACACCGGTGTAAGGGACCACTCGCGCAATGAGATGAACGCTGGAAATCCGAAAAAACAGCCGGCACAGAAACAGAACCGCATGAGCCGCGTACAGGCAACGGGCGAAAACATGCGAAAGCAGCTCAAGCAGCA]

[+] EMBL BX618280             [ACAGCACCACCACGCCGAGGCGTGTGTGGGAGGGTTCACACACCGGTGTAAGGGACCACTCGCGCAATGAGATGAACGCTGGAAATCCGAAAAAACAGCCGGCACAGAAACAGAACCGCATGAGCCGCGTACAGGCAACGGGCGAAAACATGCGAAAGCAGCTCAAGCAGCA]




>consensus_8074#3
ACAGCACCACCACGCCGAGGCGTGTGTGGGAGGGTTCACACACCGGTGTAAGGGACCACT
CGCGCAATGAGATGAACGCTGGAAATCCGAAAAAACAGCCGGCACAGAAACAGAACCGCA
TGAGCCGCGTACAGGCAACGGGCGAAAACATGCGAAAGCAGCTCAAGCAGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8074#0      CCGCGAGCGCGTTGGAATGCGCAGTTAATTGTTGTAGTCCGTCTGAAGCGTGTCATTCTT 60
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      TTTATCATTCTTTACCCATCCTAGAGCGACCGGAGTACGCTAGAACGGAACGGCATTTTT 120
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      CGAAGAAAGTGACGCACGCGAACGTTTCCACGACAAGATAGCTAATCAAGAAAGTGCAAA 180
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      ACAGAACGCAGCAAGTGCAAAAAACAAAAACCCGTGACAAAACAGTAGTGCGCAAAGTTC 240
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      TTAGTATTGGATTGTACTTTTCTATTTTGCTTTATGCATTTTGCTCTTGCAATCGAGCTA 300
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      ATGTAACCGATTGGACGGTTGCTGAAGCTTGCTGTGTAGAGAGCGGCATTATCTGACGAA 360
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      ACCAATTAGCTCGGTGCATGCTGCCGCGTCATGACAGCGGAAACGTTGAAACCATTTCTC 420
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      AATCTACCGAACGCGACGGCCGGCGATCTGAAGGCGCACTGTGCGCAAAAGTCCGCCGTC 480
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      AAGCGCGGCCTGCTTGCGCTCGGATGCATTCTGGCGGCGACCCTTTGCTGTGCGCTCATC 540
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      GGTGTGCAGATCTGGCACTTGAACAAGACGGCCGCACTGCAGCGGGAAGTCGATGACCTG 600
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      AAGCAGCAACTGTACCTACGGGCTCGCGAATTCAACGAATACGAGTTCGACAACGAGCTG 660
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      TTCGACGGGCATGATGAGTACGTGTACGAACCGGACCTGGATCCGGATATGGTCGAGGAT 720
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      GGCCACCGGCGCGAAACGGAAATGAGCGAGAGTGGTTTGTCCAGCAGCGGCATGCACGAA 780
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      GAGGACGAAGACATCGAGGGCAGCGAGGAAGTGGGCGAGGAGGAGGAGGAGCAGGAGGAA 840
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      CGGGAAAACCTTGGCCTCGAGGAGCTGAAGGAAACGAACGAGGACGTCGAGGACGGCGAA 900
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------------------
                                                                                  

consensus_8074#0      GAGGACGACGGTATACTGATTGACGACACTGTCGACATGAGCGTGTCGGCGTCCGCGGCC 960
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ------------------------------------------------ATNCCCGAGGTT 12
                                                                                  

consensus_8074#0      AGTGGCAAGCGCCGAGCACGGTCCATTTCCGGTGTGACCCGGCAGGGCGTACCGATTATC 1020
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ATCCGCGCGAACGCACAACCGTGCGACTGTATCCCGTGCTGCAACGGC-TGCTAATTAAA 71
                                                                                  

consensus_8074#0      GACGAGCCGTACGTACCGCGCCGGAACCGCACTCGGCATCCGCACCGGATCTTTGAGCAG 1080
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ATCGGTCTTTATTTGCCTTTTCCATGGTGCTGCTGGTGCATCTGTCAACGACGTTTACAA 131
                                                                                  

consensus_8074#0      TTGCGCCAGCGGCCGGAAGAGCTAGTCACACCACCGACGTCGGGCGAGATGTTCCGCTGG 1140
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      CCGAACCGTTTGCACACTGGAT---GCTTGGCACCGGTATTGCGCTCGGTGTTGGTTTGT 188
                                                                                  

consensus_8074#0      GATGTAGAAAATCGCAAAACACACACCGCCTCCCACAGCCAGCAGTCGTACGGGTCGATC 1200
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      GATGGTTTGTGCCATTGCTGTGGATTTGACTGTGAAATCTGAAACCTGCCTGGCACTGAC 248
                                                                                  

consensus_8074#0      AGCATAAGACCGTACCAGCACGAGATGCATCAACTTCGGGAACATCACAGCAC-CACCAC 1259
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ----------------------------------------------ACAGCAC-CACCAC 13
consensus_8074#1      TGTGTCTGCTGATCTGAGTGACTTTGACCACTGGGTCTGNG-CACCACGTCATGTACCCT 307
                                                                                  

consensus_8074#0      GCCGATGCCCGTGTCGTACGGTTCACGCTCCGGTGTAAGGCACCACTCGCGCAATGAGCT 1319
consensus_8074#2      ----------------------CCGCGGACGCGTGGGAGGCACCACTCGCGCAATGAGCT 38
consensus_8074#3      GCCGAGGCGTGTGTGGGAGGGTTCACACACCGGTGTAAGGGACCACTCGCGCAATGAGAT 73
consensus_8074#1      GGAGAAAACGTTCTTCGGGCGTGTACAAGGTGGGCCTGGTTGCCAACTGACACCTGGGCC 367
                                               *      *     *   ***   *     ** *  

consensus_8074#0      GAACGCTGGAAATCCGACTAAACC--GCCGGCACAGATACTGAACCGCATGAGCCGCGTT 1377
consensus_8074#2      GAACGCTGGAAATCCGACTAAACC--GCCGGCACAGATACTGAACCGCATGAGCCGCGTT 96
consensus_8074#3      GAACGCTGGAAATCCGAAAAAACA--GCCGGCACAGAAACAGAACCGCATGAGCCGCGTA 131
consensus_8074#1      GAAC-TGGGAGACTTGGCCAAGCCCGGAAGGTGTCTTGCCTTAATTGCTTTGGCAGGCGG 426
                      ****   *** *   *   ** *   *  **        *  **  ** *  ** *    

consensus_8074#0      CAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCA---------TCAGCAACAG 1428
consensus_8074#2      CAGGCAACGGGCGAAAACATGCGAAAGCAGCTCCAGCAGCAGCACCAGCATCAGCAGCAG 156
consensus_8074#3      CAGGCAACGGGCGAAAACATGCGAAAGCAGCTCAAGCAGCA------------------- 172
consensus_8074#1      GCGTGAATGTGCGACTCTTGTTGAAAGCGGTTTGTAAAACTTTATTGTACTTGTTAATTT 486
                        *  ** * ****        ****** * *     * *                    

consensus_8074#0      CGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAG 1488
consensus_8074#2      CGATTCCCCAAGGTGGTGGGAAATCCTGGAACGCAAAAGGAGATCGTAATGGCACCAGAG 216
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      CTGGGCATTGTG-TACCTTGTATTGTTGTTGTTGTTGAGAAGAAAGGGTGACAGTCAAAG 545
                                                                                  

consensus_8074#0      TCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTT 1548
consensus_8074#2      TCACGCGTTCGGTTGCGGCAACGCAAAGCCGGAGCCGTGCAGGGCGGAGCCGAACCCGTT 276
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      ACAGGAAGGACACAGAAACGAAGCAGTCAGCAGGCCAAATTGGGTTAGGAAACAGTGCCA 605
                                                                                  

consensus_8074#0      GCCAAGGGGCTGCATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGC 1608
consensus_8074#2      GCCAAGGGGCTGCATCTGGTAAAGCAATCGCCGAACGGTGTTTCCCACCGGAACGTGCGC 336
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      CACATTTGTTCACACTTTATTTGCAGATCNGCGTACTAGGTTGGTGTGGTAAGGCAACAC 665
                                                                                  

consensus_8074#0      CATCGCGATTGGACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACC 1668
consensus_8074#2      CATCGCGATTGGACCGCGAAGGACAATGTTAGCAAGCAGGCCCTCCTGTCCCAGACGACC 396
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      GCTCGCANATGTACGGTAA--GGCATTGTTGTAAGGCGTCTCCTCTAATGTAATTTATTT 723
                                                                                  

consensus_8074#0      TTTGCGTTCGACGGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCT 1728
consensus_8074#2      TTTGCGTTCGACGGCGAGCAGCTTACCATCAACGAGCCCGGCCTGTACTACCTTTACGCT 456
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      GTACCCGTCTCATCCCGGGTGTGTTCTGGCCGAACGATAATACACCCCACTTTTAATACT 783
                                                                                  

consensus_8074#0      CAGGTGACGTACGACAAC-GAGCACGGCAACAACGGCTACAAGGTGATGGTCGGCGGCAA 1787
consensus_8074#2      CAGGTGACGTACGACAAC-GAGCACGGCAACAACGGCTACAAGGTGATGGTCGGAGGCAA 515
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      TAACTATCCTAANATTACTAAAAACGTTCCCCGTAACAGTAAGGCATTCCTTGCTTGGCC 843
                                                                                  

consensus_8074#0      AAAGCATCTCTCCTGCACCGTCCATGTGCAGGGACAGAACACGAACGCCTGCTTTACGGC 1847
consensus_8074#2      AAAGCATCTCTCCTGCACCGTCCACGTGCAGGGGCAAAACACGAACGCCTGCTTTACGGC 575
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      TTGGCCAATTAAATNAACTAAACGTTGGGTAACTGGGAATTCCGGCCCCTACCGTTGGTT 903
                                                                                  

consensus_8074#0      GGGATTGACGGAAATCGAAACCGCCGGCACGACGGTCGCGATCGANGACTTTGACCACGG 1907
consensus_8074#2      GGGATTGACGGAAATCGAAACCGCCGGCACGACGGTCGCGATCGAGGACTTTGA------ 629
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      NATGGCAATTAAGCAACANATNGTTAACCTTGGCANATTGGTTAANGCTCCANACAAATT 963
                                                                                  

consensus_8074#0      TCGGCACCACGTCATGTACCCGGAGAAAACGTTCTTCGGCGTGTACAAGGTGGGCCGGCT 1967
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      TCGAGCCCATAGNAGTCAAGATCAGGCAGAACTGGGAACAGAACACCCCGTTCAGCGGAG 1023
                                                                                  

consensus_8074#0      GCCGCCACACACCGGCCCGAACGGGAGACTGCGCCAAGCCCGGAAGGTGCTGCCTTAATG 2027
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      CATCNAAACCAANTTTNCCAATTAACATCNTCCTCCAAATNNTCGGCCGGGGGTTCAAAA 1083
                                                                                  

consensus_8074#0      CGGCAGCGGAAACAGGGCGTGAAGGCGATTGTGAAGCGATTGTAAACTTTATGTACTGTA 2087
consensus_8074#2      ------------------------------------------------------------
consensus_8074#3      ------------------------------------------------------------
consensus_8074#1      TCTGG------------------------------------------------------- 1088
                                                                                  

consensus_8074#0      TTT 2090
consensus_8074#2      ---
consensus_8074#3      ---
consensus_8074#1      ---