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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8100#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1652 fasta sequence
[GCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAATAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGGCATAGTGATATGTTTAAGTCTCAGCGTGGTCCAAAGCAACACCTCCGACGGAGGAATGTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGCCTTTACTCGGCAGGTATAGTGTGCGGGCGCTTATCGCTCAATTTGCATTTGTTTCTGTGGCTACCTTCGTTTCGTTCTTTTATCCGTAGATTACAACAAATATTTCAACGCAATCGAAACGGCCCTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCGACATGGATTTGATCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGACGGCTGAAAAACTCGACATAATGTATCCGGCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGGTGGGATCTGCATCGACAAACCATTACGAAAGCCAGAAAGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTACTCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCACCACAGGACACACTGAACGCGGAACCAGCCCGGGAAGTGACGCTGGAGGAGCACTGCCGCTATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTCCTGTGCCGTTCGCTCGTATTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTACACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCAAATAAATTGATGTAACAAGGATTGCATGACCAAACATTCCTAACCGCACAAAAAAAAAAAAAAAAAAAAGGCCACATTTTTTCGGGCTG]
[+] EMBL CNS09MEY [GCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAATAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGGCATAGTGATATGTTTAAGTCTCAGCGTGGTCCAAAGCAACACCTCCGACGGAGGAATGTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGCCTTTACTCGGCAGGTATAGTGTGCGGGCGCTTATCGCTCAATTTGCATTTGTTTCTGTGGCTACCTTCGTTTCGTTCTTTTATCCGTAGATTACAACAAATATTTCAACGCAATCGAAACGGCCCTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCGACATGGATTTGATCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGACGGCTGAAAAACTCGACATAATGTATCCGGCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGGTGGGATCTGCATCGACAAACCATTACGAAAGCCAGAAAG ]
[-] EMBL CNS09IJ1 [ ACATAATGTATCCGGCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGGTGGGATCTGCATCGACAAACCATTACGAAAGCCAGTGCGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTACTCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCACCACAGGACACACTGAACGCGGAACCAGCCCGGGAAGTGACGCTGGAGGAGAACTGCCGCTATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTCCTGTGCCGTTCGCTCGTATTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTA ACTACGTG CCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCGGATGTAATTCAACGCAAGATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCAAATAAATTGATGTAACAAGGATT ]
[+] EMBL CNS08NUD [ ATGCG AGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTACTCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCACCACAGGACACACTGAACGCGGAACCAGCCCGGGAAGTGACGCTGGAGGAGCACTGCCGCTATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTCCTGTGCCGTTCGCTCGTATTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTACACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATGCAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCAAATAAATTGATGTAACAAGGATTGCATGACCAAACATTCCTAACCGCACAAAAAAAAAAAAAAAAAAAAGGCCACATTTTTTCGGGCTG]
[-] EMBL CNS09MEZ [ CTCTCCCGCGTATATCCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCACCACAGGACACACTGAACGCGGAACCAGCCCGGGAAGTGACGCTGGAGGAGCACTGCCGCTATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAG TTTCGCTTTAAACACCTTTTCCTGTGCCGTTCGCTCGTTTTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTTAACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCAAATAAATTGATGTAACAAGGATTGCA ]
consensusID : consensus_8100#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1168 fasta sequence
[GACAGTTGCAGAAGGTCAGAACGTAAACATCAACAATCTCGCTCGGATTACGCACTTCCAGCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAATAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGGCATAGTGATATGTTTAAGTCTCAGCGTGGTCCAAAGCAACACCTCCGACGAAGGAATGTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGCCTTTACTCGGCAGATTACAACAAATATTTCAACGCAATCGAAACGGCCCTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCGACATGGATTTGGTCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTACACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACAGGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCAAATAAATTGATGTAACAAGGATTGCATGACCAAACATTCCTAACCGCACAA]
[+] EMBL CNS09PYQ [GACAGTTGCAGAAGGTCAGAACGTAAACATCAACAATCTCGCTCGGATTACGCACTTCCAGCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAATAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGGCATAGTGATATGTTTAAGTCTCAGCGTGGTCCAAAGCAACACCTCCGACGAAGGAATGTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGCCTTTACTCGGCAGATTACAACAAATATTTCAACGCAATCGAAACGGCCCTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCGACATGGATTTGGTCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTACACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACAGGATCAAAAACGAATGAACGGTAT ]
[-] EMBL CNS09PYR [ GGTTACGTTGCCTGCAACAGTACCAATTGCCACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCCACGGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCCACATGGATTTGGTCGTGAACTGCCGCCACTGGCCCCAGATCCATCGAAACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTA ACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCAAATAAATTGATGTAACAAGGATTGCATGACCAAACATTCCTAACCGCACAA]
consensusID : consensus_8100#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 877 fasta sequence
[CACTTCCAGCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAATAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGGCATAGTGATATGTTTAAGTCTCAGCGTGGTCCAAAGCAACACCTCCGACGAAGGAATGTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGCCTTTACTCGGCAGATTACAACAAATATTTCAACGCAATCGAAACGGCCCTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCGACATGGATTTGATCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGACGGCTGAATACCTCGACATAATGTATCCGGCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGGTGGGATCTGCATCGACAAACCATTACGAAAGCCAGTGCGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTACTCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTG]
[+] EMBL CNS09IJ0 [CACTTCCAGCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAATAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGGCATAGTGATATGTTTAAGTCTCAGCGTGGTCCAAAGCAACACCTCCGACGAAGGAATGTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGCCTTTACTCGGCAGATTACAACAAATATTTCAACGCAATCGAAACGGCCCTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAGGCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAACAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGAATGCATGTTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCCGACATGGATTTGATCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAGGAAAAGATCCCCGTACTTTCGTTCAGCAAGACGGCTGAATACCTCGACATAATGTATCCGGCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGGTGGGATCTGCATCGACAAACCATTACGAAAGCCAGTGCGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTACTCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTG]
consensusID : consensus_8100#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 811 fasta sequence
[AAGCGGCGGAATTCCTCGAGAACTGTTGGCCTATTGGACCATTACGAAAGCCAGTGCGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTAATCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCACCACAGGACACACTGAACGCGGAACCAGCCCGGGGAGTGACGCTGGAGGAGAACTGCCGCTATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTCCTGTGCCGTTCGCTCGTTTTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTAACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATGCAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGTTGGGCTCCCCCCGCGGTTCGGAAAGGGGGTGGAAAAGCATTATGAATCAATACTTTCAAATAAA]
[-] EMBL CNS08NUE [AAGCGGCGGAATTCCTCGAGAACTGTTGGCCTATTGGACCATTACGAAAGCCAGTGCGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGCGTGACCCGCTGGTGCTAATCTCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCACCACAGGACACACTGAACGCGGAACCAGCCCGGGGAGTGACGCTGGAGGAGAACTGCCGCTATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTCCTGTGCCGTTCGCTCGTTTTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTAACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACGGCAAGTTGATACGCTATGCAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTTGTTGGGCTCCCCCCGCGGTTCGGAAAGGGGGTGGAAAAGCATTATGAATCAATACTTTCAAATAAA]
consensusID : consensus_8100#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 97 fasta sequence
[TTCCAACAACCAATAAAAACATTCATTTTATTAAACGCATAGTGATATGTTTAAATCTCAGCGTGGTCCAAAGCAACACCTCCGACGTAGGAATGTG]
[+] EMBL CNS08F09 [TTCCAACAACCAATAAAAACATTCATTTTATTAAACGCATAGTGATATGTTTAAATCTCAGCGTGGTCCAAAGCAACACCTCCGACGTAGGAATGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8100#2 ----------------------------------------------------CACTTCCA 8
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GACAGTTGCAGAAGGTCAGAACGTAAACATCAACAATCTCGCTCGGATTACGCACTTCCA 60
consensus_8100#0 ------------------------------------------------------------
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 GCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAA 68
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAA 120
consensus_8100#0 GCATGTAGTACAATTTTAGTCTAATTTAAAGATCTGCAACGAGTATCTCTCTGCACGCAA 60
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 TAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGG 128
consensus_8100#4 -----------------------TTCCAACAACCAATAAAAACATTCATTTTATTAAACG 37
consensus_8100#1 TAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGG 180
consensus_8100#0 TAGCTCAAGACTGCCAGGTTAAGTTCCAGCAACGAATAGAAACATGCATTTTATTAAAGG 120
consensus_8100#3 AAGCGGCGGAATTCC---TCGAGAACTGTTGGCCTATTGGACCAT-TACGAAAGCCAGTG 56
* * ** * *** * * * *
consensus_8100#2 CATAGTGATATGTTTAAGTCTC---AGCGTGGTCCAAAGCAACACCTCCGACGAAGGAAT 185
consensus_8100#4 CATAGTGATATGTTTAAATCTC---AGCGTGGTCCAAAGCAACACCTCCGACGTAGGAAT 94
consensus_8100#1 CATAGTGATATGTTTAAGTCTC---AGCGTGGTCCAAAGCAACACCTCCGACGAAGGAAT 237
consensus_8100#0 CATAGTGATATGTTTAAGTCTC---AGCGTGGTCCAAAGCAACACCTCCGACGGAGGAAT 177
consensus_8100#3 CGGACTGGGATGCGAAGGAACCGAAAGCTTTCTTCCGAGGGTCGCGCACATCGGATGAGC 116
* * ** *** * * *** * * * ** * * * ** * **
consensus_8100#2 GTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGC-CTTT 244
consensus_8100#4 GTG--------------------------------------------------------- 97
consensus_8100#1 GTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGC-CTTT 296
consensus_8100#0 GTGTATGGCCAAGGAGCAATGCACGGATCCGGAAGCAAGTACAACTGGCCGAAGC-CTTT 236
consensus_8100#3 GTGACCCGCT--GGTGCTAATCTC----CCGCGCACAACCATCGCTCGTCGATGCGCAGT 170
***
consensus_8100#2 ACTCGGCAG--------------------------------------------------- 253
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ACTCGGCAG--------------------------------------------------- 305
consensus_8100#0 ACTCGGCAGGTATAGTGTGCGGGCGCTTATCGCTCAATTTGCATTTGTTTCTGTGGCTAC 296
consensus_8100#3 ACACGAAAAATCAAGCCTGG---------------------------------------- 190
consensus_8100#2 -------------------------ATTACAACAAATATTTCAACGCAATCGAAACGGCC 288
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 -------------------------ATTACAACAAATATTTCAACGCAATCGAAACGGCC 340
consensus_8100#0 CTTCGTTTCGTTCTTTTATCCGTAGATTACAACAAATATTTCAACGCAATCGAAACGGCC 356
consensus_8100#3 -------------------------AAATCACCACAGGACACACTGAACGCGGAACCAGC 225
consensus_8100#2 CTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAG 348
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 CTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAG 400
consensus_8100#0 CTGGCAGGTTACGTTGCCTGCAACAGTACCAATTGCAACTGTCATGCGGACGTGCTGAAG 416
consensus_8100#3 CCGGGGAGTGACGCTGGA-GGAGAACTGCCGCTATCGTTTTCTGTTCAACT---TTCGCG 281
consensus_8100#2 GCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAA 408
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAA 460
consensus_8100#0 GCGGACCTGAAACCGTTCAAAGCACACGGCATCACAAAGGAAATGATAAATCGAGCCAAA 476
consensus_8100#3 GTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTCC--TGTGCCGTTCGCTCGTTTTTCA 339
consensus_8100#2 CAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGG-AATGCATG 467
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 CAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGGAATGCATG 520
consensus_8100#0 CAGTACGGAACCCACTATCAGGTGATCGGCCATAAGCTGTACCGGCAACGGGAATGCATG 536
consensus_8100#3 CGT--GGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGGTAACTACG 397
consensus_8100#2 TTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCC 527
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 TTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCC 580
consensus_8100#0 TTTCCGGCCCGATGTTCCGGCGTGGAGCACTTTGTAAGGCCACTGTTGCCGCTCCTGCCC 596
consensus_8100#3 TGCCCGTCCCGGT-TCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACGTTTTTTCAA 456
consensus_8100#2 GACATGGATTTGATCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAG 587
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GACATGGATTTGGTCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAG 640
consensus_8100#0 GACATGGATTTGATCGTGAACTGCCGCGACTGGCCCCAGATCCATCGACACTGGAGCAAG 656
consensus_8100#3 GAGCACGATCAGTTGGCGCG-TGCCATTGCCGAGAGAGGATATGAACACATT-------T 508
consensus_8100#2 GAAAAGATCCCCGTACTTTCGTTCAGCAAGACGGCTGAATACCTCGACATAATGTATCCG 647
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GAAAAGATCCCCGTACTTTCGTTCAGCAAGAGTTTTTCTATCCCTCGCTTAAACCATGGG 700
consensus_8100#0 GAAAAGATCCCCGTACTTTCGTTCAGCAAGACGGCTGAAAAACTCGACATAATGTATCCG 716
consensus_8100#3 GGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATACG 568
consensus_8100#2 GCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGG 707
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 TACACTACGTGCCCGTCCCG-GTTCGCAGCACCCCGGAGGAGCTGGAAGCTTTGATAACG 759
consensus_8100#0 GCCTGGGCGTTTTGGGAAGGTGGCCCCGCTATTGCGCTCTATCCGACCGGTCTCGGACGG 776
consensus_8100#3 GCAAGTTGATACGCTATGCAGTAGAGCGCGATTCCACTTTAATTGA--AGTGTGAAGCGA 626
consensus_8100#2 TGGGATCTGCATCGACAAACCATTACGAAAGCCAGTGCGGACTG-GGATGCGAAGGAACC 766
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 TTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGATATGAACACATT 819
consensus_8100#0 TGGGATCTGCATCGACAAACCATTACGAAAGCCAGAAAGGACTG-GGATGCGAAGGAACC 835
consensus_8100#3 CACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGAA 686
consensus_8100#2 GAAAGCTTTCTTCCGAGGGTCG-CGCACATCGG-ATGAGCGTGACCCGCTGGTGCTACTC 824
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 TGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTGCTAAAGCGATAC 879
consensus_8100#0 GAAAGCTTTCTTCCGAGGGTCG-CGCACATCGG-ATGAGCGTGACCCGCTGGTGCTACTC 893
consensus_8100#3 GACAATCTCTGACAAAGTCTGTACACGCAGCAG-ATGTAATTCAACGCAAGATTTCATTT 745
consensus_8100#2 TCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTG------- 877
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAAGTGTGAAG--CG 937
consensus_8100#0 TCCCGCGCACAACCATCGCTCGTCGATGCGCAGTACACGAAAAATCAAGCCTGGAAATCA 953
consensus_8100#3 GTTGGGCTCCCCCCGCGGTTCGGAAAGGGGGTGGAAAAGCATTATGAATCAATACTTTCA 805
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ACAGGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCAGGTAACAAGA 997
consensus_8100#0 CCACAGGACACACTGAACGCGGAACCAGCCCGGGAAGTGACGCTGGAGGAGCACTGCCGC 1013
consensus_8100#3 AATAAA------------------------------------------------------ 811
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 AGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAAGATTTCATTT 1057
consensus_8100#0 TATCGTTTTCTGTTCAACTTTCGCGGTGTAGCGGCTAGCTTTCGCTTTAAACACCTTTTC 1073
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 GATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATCAATACTTTCA 1117
consensus_8100#0 CTGTGCCGTTCGCTCGTATTTCACGTGGGCGATGAGTGGCAAGAGTTTTTCTATCCCTCG 1133
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 AATAAATTGATGTAACAAGGATTGCATGACCAAACATTCCTAACCGCACAA--------- 1168
consensus_8100#0 CTTAAACCATGGGTACACTACGTGCCCGTCCCGGTTCGCAGCACCCCGGAGGAGCTGGAA 1193
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 GCTTTGATAACGTTTTTTCAAGAGCACGATCAGTTGGCGCGTGCCATTGCCGAGAGAGGA 1253
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 TATGAACACATTTGGAACCATCTGCGCATGGCGGATGTAGAGTGTTACTGGAAGAAGCTG 1313
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 CTAAAGCGATACGGCAAGTTGATACGCTATACAGTAGAGCGCGATTCCACTTTAATTGAA 1373
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 GTGTGAAGCGACACGATCAAAAACGAATGAACGGTATTATTTTTGTGACAATTTGCTGCA 1433
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 GGTAACAAGAAGACAATCTCTGACAAAGTCTGTACACGCAGCAGATGTAATTCAACGCAA 1493
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 GATTTCATTTGATGAGCTCCCCCAGCGGTTCGAAAAGAGAGTGAAAAAGCATTATGAATC 1553
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ------------------------------------------------------------
consensus_8100#4 ------------------------------------------------------------
consensus_8100#1 ------------------------------------------------------------
consensus_8100#0 AATACTTTCAAATAAATTGATGTAACAAGGATTGCATGACCAAACATTCCTAACCGCACA 1613
consensus_8100#3 ------------------------------------------------------------
consensus_8100#2 ---------------------------------------
consensus_8100#4 ---------------------------------------
consensus_8100#1 ---------------------------------------
consensus_8100#0 AAAAAAAAAAAAAAAAAAAGGCCACATTTTTTCGGGCTG 1652
consensus_8100#3 ---------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||