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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8113#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1360 fasta sequence
[CCGGGTGACCAGAAGGCGGCCGAGCCGCTGTACGCCCGCGATGCCGAGACGGCCGACGGTGGCATGTTCGCGAAGAAAAAGGAGGAACCCAAGTGGGTCCGCGTGATCGTGGTGTGCATCTATCTGTTTACGGTGTCGTTTGCCGCGCTGCTCCTCTCGCTCTACTACATCTTCTTCTGGACGCCGAAGATTGAGCCGTACGAGGACGACAGCCCCGAGCGGTTAACGGGGTGCGATCAGGACGATTAGCGCGGGAGTCGGCGCAGTCACACTCCCCACCAATCAATCCTTTCCCGGTTGCGGATGCAGCAGAGCAGTTACCTAGCTTTAAGAGACACACTGACACACCGAGCGGGGGTTCCGATGCGATAGGCGGCCAACGGGGGAACGGCACAGCAGCAGCAGCAGCATGAGCTACACGGCCGAGGAGAAGATAAAGCTCGCGGGCGAAGACTCGAAGGACCGGCTGTACGAGGCGAAACAGAACCAGAAGGCGATACGCATCCTGACGGTGGCGGCGTACGTGCTGTGCGTGTCGCTGGTCGCCATCATGCTGTCGCTCTACTACATCTTCTTCTGGGATCCGAGCACGAACCCCGATGCAGCAGAAAACGCAAACGATCGATACCCTTGTCATACCGGACCATCTGGCGATCCGGCTGGCGAACCGCAGCGAGGTGCCGGCGAGCCGCTTTTTCCACACCTTCTACCAGCACCTGGTGCAGGATCGCGTCGTCAAGATCCGGAAGGAGGTGCAGATCTCGGAGTCGACCAATCTCACCAAACTGATCGAGCTGTACCAT------CAGCAGCAGCAGCAGCAGCAGCAGCACCGTCCGGGCAAGCAGTCGCCGCCCGACGGTCCACTCTCCTACCAGGTGCAGGCGGAACAGCAGCCAGGCTCGGCC--GCTAGCGATGGGCCCCGGCTGCACACGGACGAGGACGACGGTAGCGACGATTACGAGCAGAGCGGCAACTACGAGCTGTACTCCAACCACACCACCATCCAGCTCGATGCCGATGAAACCGGGCCGCAATGAGAGGTCATTCTCGCTGCATTGCTTGGAGCCCGCAGACGCACCCCCGGCTTAGTGTGCTG------CACACACACACACAGCGGATTACAGTACAGGATTAGTCACGACTATCTCTCACAC--ACACACACGCATCTCGGTGCGGAACTATACATACAGGAATTGCGCGCACACGTTTTCGTACGATTTTAATGCACCAAACACCACGACCCCCCGCACGTAACTGCTACAAACTGAGGAAGAGGAAACAATTATTATATACCTATATAAATATATACATATATACACGGCACCGACGGCAGTACA-GGGAAAGTATGCGCTGCGAGAGGTGG]
[+] EMBL BM618684 [CCGGGTGACCAGAAGGCGGCCGAGCCGCTGTACGCCCGCGATGCCGAGACGGCCGACGGTGGCATGTTCGCGAAGAAAAAGGAGGAACCCAAGTGGGTCCGCGTGATCGTGGTGTGCATCTATCTGTTTACGGTGTCGTTTGCCGCGCTGCTCCTCTCGCTCTACTACATCTTCTTCTGGACGCCGAAGATTGAGCCGTACGAGGACGACAGCCCCGAGCGGTTAACGGGGTGCGATCAGGACGATTAGCGCGGGAGTCGGCGCAGTCACACTCCCCACCAATCAATCCTTTCCCGGTTGCGGATGCAGCAGAGCAGTTACCTAGCTTTAAGAGACACACTGACACACCGAGCGGGGGTTCCGATGCGATAGGCGGCCAACGGGGGAACGGCACAGCAGCAGCAGCAGCATGAGCTACACGGCCGAGGAGAAGATAAAGCTCGCGGGCGAAGACTCGAAGGACCGGCTGTACGAGGCGAAACAGAACCAGAAGGCGATACGCATCCTGACGGTGGCGGCGTACGTGCTGTGCGTGTCGCTGGTCGCCATCATGCTGTCGCTCTACTACATCTTCTTCTGGGATCCGAGCACGAACCCCGATGC ]
[+] EMBL BM627254 [ ccgCACTGACACACCGAGCGGGGGTTCCGATGCGATAGGCGGCCAACGGGGGAACGGCACAGCAGCAGCAGCAGCATGAGCTACACGGCCGAGGAGAAGATAAAGCTCGCGGGCGAAGACTCGAAGGACCGGCTGTACGAGGCGAAACAGAACCAGAAGGCGATACGCATCCTGACGGTGGCGGCGTACGTGCTGTGCGTGTCGCTGGTCGCCATCATGCTGTCGCTCTACTACATCTTCTTCTGGGATCCGAGCACGAA CCCGATGCAGCAGAAAACGCAAACGATCGATACCCTTGTCATACCGGACCATCTGGCGATCCGGCTGGCGAACCGCAGCGAGGTGCCGGCGAGCCGCTTTTTCCACACCTTCTACCAGCACCTGGTGCAGGATCGCGTCGTCAAGATCCGGAAGGAGGTGCAGATCTCGGAGTCGACCAATCTCACCAAACTGATCGAGCTGTACCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACCGTCCGGGCAAGCAGTCGCCGCCCGACGGTCCACTCTCCTACCAGGTGCAGGCGGAACAGCAGCCAGGCTCGGCC GCTAGCGATGGGCCCCGACTGCACACGGACGAGGACGACGGTAGCGACGATTACGAGCAGAGCGGCAACTACGAGCTGTACTCCAACCACACCACCATCCAGCTCGATGCCGATGAAACCGGGC ]
[+] EMBL BM635054 [ ccgACACCTTCTACCAGCACCTGGTGCAGGATCGCGTCGTCAAGATCCGGAAGGAGGTGCAGATCTCGGAGTCGACCAATCTCACCAAACTGATCGAGCTGTACCAT CAGCAGCAGCAGCAGCAGCAGCAGCACCGTCCGGGCAAGCAGTCGCCGCCCGACGGTCCACTCTCCTACCAGGTGCAGGCGGAACAGCAGCCAGG CGGCCGAGCTAGCGATGGGCCCCGGCTGCACACGGACGAGGACGACGGTAGCGACGATTACGAGCAGAGCGGCAACTACGAGCTGTACTCCAACCACACCACCATCCAGCTCGATGCCGATGAAACCGGGCCGCAATGAGAGGTCATTCTCGCTGCATTGCTTGGAGCCCGCAGACGCACCCCCGGCTTAGTGTGCTGCACACACACACACACACACAGCGGATTACAGTACAGGATTAGTCACGACTATCTCTCACAC ACACACACGCATCTCGGTGCGGAACTATACATACAGGAATTGCGCGCACACGTTTTCGTACGATTTTAATGCACCAAACACCACGACCCCCCGCACGTAACTGCTACAAACTGAGGAAGAGGAAACAATTATTATATACCTATATAAATATATACATATATACACGGCACCGACGGCAGTACAGGGGAAAGTATGCGCTGCGAGAGGT ]
[+] EMBL BM597957 [ ccgAGCACCTGGTGCAGGATCGCGTCGTCAAGATCCGGAAGGAGGTGCAGATCTCGGAGTCGACCAATCTCACCAAACTGATCGAGCTGTACCAT CAGCAGCAGCAGCAGCAGCAGCAGCACCGTCCGGGCAAGCAGTCGCCGCCCGACGGTCCACTCTCCTACCAGGTGCAGGCGGAACAGCAGCCAGGCTCGGCC GCTAGCGATGGGCCCCGGCTGCACACGGACGAGGACGACGGTAGCGACGATTACGAGCAGAGCGGCAACTACGAGCTGTACTCCAACCACACCACCATCCAGCTCGATGCCGATGAAACCGGGCCGCAATGAGAGGTCATTCTCGCTGCATTGCTTGGAGCCCGCAGACGCACCCCCGGCTTAGTGTGCTG CACACACACACACAGCGGATTACAGTACAGGATTAGTCACGACTATCTCTCACACATACACACACGCATCTCGGTGCGGAACTATACATACAGGAATTGCGCGCACACGTTTTCGTACGATTTTAATGCACCAAACACCACGACCCCCCGCACGTAACTGCTACAAACTGAGGAAGAGGAAACAATTATTATATACCTATATAAATATATACATATATACACGGCACCGACGGCAGTACA GGGAAGGTATGCGCTGCGAGAGGTGG]
consensusID : consensus_8113#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 626 fasta sequence
[AATCGGCCGAGGTATATACCTATATAAATATATACATATATACACGGCACCGACGGCAGTACAGGAAGGTATGCGCTGCGAGAGGTGGCATGAGGGACAGACGAGCGCGGGCGCGTATCCGGCGCATGGTTTGTTGCGCACGCCTGGGGAGGAAGGAAAACGCGTGCTACCAGTGGAGTAGAGTGTAACTTTGTGGCCTAAAACCGAATTAACGTGCGTGCGTGTGTGTGTCACTAGCCCAACCAAATGTGTGGAACGCAAAACAAAAATCAAATCTCCAAAACAGACACACTTTCCCAACCCATCCGAGCGGACCGTGCCAAGGCCGCGCGGCGGAAGATGAGTTGGGCGGGCAACTCTTGCAATAAACTGCACACCCAGGATGTACGGGGCAGGTAGGGAAGAGGGCACCATTACAAAGACAGCAGCTATCGGTTGTACCTTCCCCC-CC-CCCTCCACGCCCTTTGGGCGTTTTCCTCTCCCGCGAATGTTTTAAACGTGAAGATATTTAACTATATTAACCGGATAGCGTTTTAGTACCTTTTGGACGAGCTAGCAAGTTTATAGCGAGCGAGAGAGAGAAAGAGAGAGAGGGTATGTGTGTGTGTGTGTGGAGAGAGAGAGAG]
[+] EMBL AL696977 [AATCGGCCGAGGTATATACCTATATAAATATATACATATATACACGGCACCGACGGCAGTACAGGAAGGTATGCGCTGCGAGAGGTGGCATGAGGGACAGACGAGCGCGGGCGCGTATCCGGCGCATGGTTTGTTGCGCACGCCTGGGGAGGAAGGAAAACGCGTGCTACCAGTGGAGTAGAGTGTAACTTTGTGGCCTAAAACCGAATTAACGTGCGTGCGTGTGTGTGTCACTAGCCCAACCAAATGTGGGGAACGCAAAACAAAAATCAAATCTCCAAAACAGACACACTTTCCCAA CCATCCGAGCGGACCGTGCCAAGGCCGCGCGGTGTAAGATGAGTTGGGCGGGCAACTCTTGCAATAAACTGCACACCCAGGATGTACGGGGCAGGTAGGGAAGGGGGCACCATTACAAAGACAGCAGCTATCGGTTGTACCTTCCCCCACCACCCTCCGGGCCTTTTGGGCGTTTTCCTCTCCCGCGAA ]
[+] EMBL BX620796 [ CTAAAACCGAATTAACGTGCGTGCGTGTGTGTGTCACTAGCCCAACCAAATGTGTGGAACGCAAAACAAAAATCAAATCTCCAAAACAGACACACTTTCCCAACCCATCCGAGCGGACCGTGCCAAGGCCGCGCGGCGGAAGATGAGTTGGGCGGGCAACTCTTGCAATAAACTGCACACCCAGGATGTACGGGGCAGGTAGGGAAGAGGGCACCATTACAAAGACAGCAGCTATCGGTTGTACCTTCCCCC CC CCCTCCACGCCCTTTGGGCGTTTTCCTCTCCCGCGAATGTTTTAAACGTGAAGATATTTAACTATATTAACCGGATAGCGTTTTAGTACCTTTTGGACGAGCTAGCAAGTTTATAGCGAGCGAGAGAGAGAAAGAGAGAGAGG ]
[+] EMBL BX625713 [ CACTAGCCCAACCAAATGTGTGGAACGCAAAACAAAAATCAAATCTCCAAAACAGACACACTTTCCCAACCCATCCGAGCGGACCGTGCCAAGGCCGCGCGGCGGAAGATGAGTTGGGCGGGCAACTCTTGCAATAAACTGCACACCCAGGATGTACGGGGCAGGTAGGGAAGAGGGCACCATTACAAAGACAGCAGCTATCGGTTGTACCTTCCCCC CC CCCTCCACGCCCTTTGGGCGTTTTCCTCTCCCGCGAATGTTTTAAACGTGAAGATATTTAACTATATTAACCGGATAGCGTTTTAGTACCTTTTGGACGAGCTAGCAAGTTTATAGCGAGCGAGAGAGAGAAAGAGAGAGAGGGTATGT ]
[+] EMBL BX617389 [ CCAACCCATCCGAGCGGACCGTGCCAAGGCCGCGCGGCGGAAGATGAGTTGGGCGGGCAACTCTTGCAATAAACTGCACACCCAGGATGTACGGGGCAGGTAGGGAAGAGGGCACCATTACAAAGACAGCAGCTATCGGTTGTACC TCCCCC CC CCCTCCACGCCCTTTGGGCGTTTTCCTCTCCCGCGAATGTTTTAAACGTGAAGATATTTAACTATATTAACCGGATAGCGTTTTAGTACCTTTTGGACGAGCTAGCAAGTTTATAGCGAGCGAGAGAGAGAAAGAGAGAGAGGGTATGTGTGTGTGTGTGTGGAGAGAGAGAGAG]
[+] EMBL BX616434 [ GCGCGGCGGAAGATGAGTTGGGCGGGCAACTCTTGCAATAAACTGCACACCCAGGATGTACGGGGCAGGTAGGGAAGAGGGCACCATTACAAAGACAGCAGCTATCGGTTGTACCTTCCCCC CC CCCTCCACGCCCTTTGGGCGTTTTCCTCTCCCGCGAATGTTTTAAACGTGAAGATATTTAACTATATTAACCGGATAGCGTTTTAGTACCTTTTGGACGAGCTAGCAAGTTTATAGCGAGCGAGAGAGAGAAAGAGAGAGAGGGTATGTGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8113#0 CCGGGTGACCAGAAGGCGGCCGAGCCGCTGTACGCCCGCGATGCCGAGACGGCCGACGGT 60
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 GGCATGTTCGCGAAGAAAAAGGAGGAACCCAAGTGGGTCCGCGTGATCGTGGTGTGCATC 120
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 TATCTGTTTACGGTGTCGTTTGCCGCGCTGCTCCTCTCGCTCTACTACATCTTCTTCTGG 180
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 ACGCCGAAGATTGAGCCGTACGAGGACGACAGCCCCGAGCGGTTAACGGGGTGCGATCAG 240
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 GACGATTAGCGCGGGAGTCGGCGCAGTCACACTCCCCACCAATCAATCCTTTCCCGGTTG 300
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 CGGATGCAGCAGAGCAGTTACCTAGCTTTAAGAGACACACTGACACACCGAGCGGGGGTT 360
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 CCGATGCGATAGGCGGCCAACGGGGGAACGGCACAGCAGCAGCAGCAGCATGAGCTACAC 420
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 GGCCGAGGAGAAGATAAAGCTCGCGGGCGAAGACTCGAAGGACCGGCTGTACGAGGCGAA 480
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 ACAGAACCAGAAGGCGATACGCATCCTGACGGTGGCGGCGTACGTGCTGTGCGTGTCGCT 540
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 GGTCGCCATCATGCTGTCGCTCTACTACATCTTCTTCTGGGATCCGAGCACGAACCCCGA 600
consensus_8113#1 AATCGGCCGAGGTATATACCTATA-TAAATATATACATATATACACGGCACCGACGGCAG 59
*** * * * ** ** ** ** * * * **** ** *
consensus_8113#0 TGCAGCAGAAAACGCAA-ACGATCGATACCCTT---GTCATACCGGACCATCTGGCGATC 656
consensus_8113#1 TACAGGAAGGTATGCGCTGCGAGAGGTGGCATGAGGGACAGACGAGCGCGGGCGCGTATC 119
* *** * * ** *** * * * * * ** ** * * * ***
consensus_8113#0 CGGCTGGCGAACCGCAGCGAGGTGCCGGCGAGCCGCTTTTTCCACACCTTCTACCAGCAC 716
consensus_8113#1 CGGCGCATGGTTTGTTGCGCACGCCTGGGGAGGAAGGAA---AACGCGTGCTACCAGTGG 176
**** * * *** * ** *** ** * * *******
consensus_8113#0 C-TGGTGCAGGATCGCGTCGTCAAGATCCGGAAGGAGGTGCAGATCTCGGAGT-CGACCA 774
consensus_8113#1 AGTAGAGTGTAACTTTGTGGCCTAAAACCGAATTAACGTGCGTGCGTGTGTGTGTCACTA 236
* * * * ** * * * * *** * * **** * * ** ** *
consensus_8113#0 ATCTCACCAAACTGATCGAGCTGTACCATCAGCAGCAG-CAGCAGCAGCAGCAGCACCGT 833
consensus_8113#1 GCCCAACCAAATGTGTGGAAC-GCAAAACAAAAATCAAATCTCCAAAACAGACACACTTT 295
* ****** * ** * * * * * * ** * * *** *** *
consensus_8113#0 CCGGGCAAGCAGTCGCCGCCCGACGGTCCACTCTCCTACCAGGTGCAGGCGGAACAG-CA 892
consensus_8113#1 CC---CAACCCATC-CGAGCGGACCGTGCCAAGGCCGCGCGGCGGAAGATGAGTTGGGCG 351
** *** * ** * * *** ** * ** * * * ** * * *
consensus_8113#0 GCCAGGCTCGGCCGCTAGCGATGGGCCCCGGCTGCACACGGACGAGGACGACGGTAGCGA 952
consensus_8113#1 GGCAACTCTTGCAATAAACTGCACACCCAGGATGTACG-GGGCAGGTAGGGAAGAGGGCA 410
* ** ** * * *** ** ** ** ** * * * * * * *
consensus_8113#0 CGATTACGAGCAGAGCGGCAACTACGAGCTGTACTCCAACCACACCACCATCCAGCTCGA 1012
consensus_8113#1 CCATTACAAA---GACAGCAGCTATCGGTTGTACCTT--CCCCCCCCCCTCCACGCCCTT 465
* ***** * * *** *** * ***** ** * ** ** * ** *
consensus_8113#0 TGCCGATGAAACCGGGCCGCAATGAGAGGTCATTCTCGCTGCATTGCTTGGAGCCCGCAG 1072
consensus_8113#1 TGGGCGTTTTCCTCTCCCGCGA----ATGTTTTAAACGTGAAGATATTTA-ACTATATTA 520
** * * **** * * ** * ** * ** *
consensus_8113#0 ACGCACCCCCGGCTTAGTGTGCTGCACACACACACACAGCGGATTACAGTACAGGATTAG 1132
consensus_8113#1 ACCGGATAGCGTTTTAGTACCTTTTGGACGAGCTAGCA--AGTTTATAGCG-AGCGAGAG 577
** ** ***** * ** * ** * *** ** ** **
consensus_8113#0 TCACGACTATCTCTCACACACACACACGCATCTCGGTGCGGAACTATACATACAGGAATT 1192
consensus_8113#1 AGAGAAAGAGA----GAGAGGGTATGTGTGTGTGTGTGTGGAGAGAGAGAGAG------- 626
* * * * * * * *** *** * * * *
consensus_8113#0 GCGCGCACACGTTTTCGTACGATTTTAATGCACCAAACACCACGACCCCCCGCACGTAAC 1252
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 TGCTACAAACTGAGGAAGAGGAAACAATTATTATATACCTATATAAATATATACATATAT 1312
consensus_8113#1 ------------------------------------------------------------
consensus_8113#0 ACACGGCACCGACGGCAGTACAGGGAAAGTATGCGCTGCGAGAGGTGG 1360
consensus_8113#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||