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Anopheles gambiae
cluster # 8117 cluster # 8117       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8117#0 length = 1717 sequences # 7  
 consensus_8117#1 length = 647 sequences # 1  
consensus_8117#2 length = 614 sequences # 1  
consensusID : consensus_8117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1717
fasta sequence 
                              [CCGCCCACGCGTCCGAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAACGCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAGGGCGTGGATCGGGCACAGGCGGTCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGGGGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGAAGTAGAGATGGCACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGCAGTATAGCGAAACGACACTGGATGCTGAGTATCGAAAAAGCATGCTGTCGGCGGCTCACGTACTCGCAATGGATGCCAAAAACCTGCTCGACGT-GTCGATTCCATTCGTGTGCGCTA-CCGAACCTCTTCCCACAGCAGCAG---CAGCAGCAGCCGCAACAACCGAGCGCACCGTCGAGCCCAACGCAACGGCAACATGGTGCCGCCACCTCAGTCACATCCGCAGTCCATCCGTCCAACACACCCCAAATGTTTGCCCAGCAGCAGCAGCAGCAGCATTCCTTCGATCAGTCGCAACTGCTCAT-GATGGGCGATTGCTACCAGAATCTGCAACCAAAGCAACCGATGCTGGCGCACAGC-TCGCCACCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCCTACCAGCAGAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAGCAGCAGCACCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGCCATTGCCGCGAAACCGCCCTCGGTTGTGGCGATGGCTTCGGTGAAGCTGAAACCCGTCGCTACGGGCTCGCTGGACGTACCGGACGCAGCCGGAGGGGAGCTGTACTCCAACGCACCGCACGCAACGTCGCCCGGGCCGAACGGTGCCAATGCGGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCGTGCAGGAAAATTTGCTTGCCGCCAACAACCAGAAGGTCATGGCCACGAACAAGCTCAGCGGTTAGGGTGGCTAAGAA-AATGCGATCGTTGGTTTGAGATTGCTTCATGCTCATCATACTCATTTATTTTCCCCAATTATGATGTTGTGCGTGCTTTTTGCGAGGTGTCTTC-TTTTTTTAGAAAAGAAAATAGTGAAATAATGAAACTGTACGTGAACATGCAGGCTGAAATGGCATATAGAG---GCTACGGTAGAGGAGAAATGCTCGCTAATATAACCACTCTTCAGTACAGTACTTGAAATCGAATCGAACTGCTTGGTAAGGTGATAGCTTCTTACCGTACGATAAGCGTAGGATGGATCTAGAATCGTAGAAGC-AAACAGTTATCGCATACAAAGCTGAAATTTCCGGAAATGATGCAATTGTGAAGAGAAACAGAAAGGTAGGAAGAGTCATTTGCACACCTGCCGGGATGCGTGTACGCTAGATATGCTAGAATT-AAAAGCATAATTTTATTGTATTAGTTCGGAA-AAACGCTGCATAATTCTGTTGGTGTACGCCTATTCCACGCTGAGGCGCAGTATGACGGCACACCAATATGATG-ACCATGATAATAATGACACGCAAGGA-GATATCATCGTTTGTGAATGGAAGGGATTTTT-TTTAC-AATA-AA-A-AAGAGA-ACAATTATGGACATGACATG]

[+] EMBL BM607840             [CCGCCCACGCGTCCGAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAACGCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAGGGCGTGGATCGGGCACAGGCGGTCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGGGGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGAAGTAGAGATGGCACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGCAGTATAGCGAAACGACACTGGATGCTGAGTATCGAAAAAGCATGCTGTCGGCGGCTCACGTACTCGCAATGGATGCCAAAAACCTGCTCGACGTCGTCGATTCCATTCGTGTGCGCTACCCGAACCTCTTCCCACAGCAGCAGCAACAGCAGCAGCCGCAACAACCGAGCGCACCGTCGAGCCCAACGCAACGGCAACATGGTGCCGCCACCTCAGTCACATCCGCAGTCCATCCGTCCAACACACCCCAAATGTTTGCCCAGCAGCAGCAGCAGCAGCATTCCTTCGATCAGTCGCAACTGCTCATGGATGGGCGATTGCTACCAGAATCTGCAACCAAAGCAACCGATGCTGGCGCACAGCTTCGCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM654849             [                                                                                                                                                                                                                                                       ccgGGCACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGCAGTATAGCGAAACGACACTGGATGCTGAGTATCGAAAAAGCATGCTGTCGGCGGCTCACGTACTCGCAATGGATGCCAAAAACCTGCTCGACGTCGTCGATTCCATTCGTGTGCGCTACCCGAACCTCTTCCCACAGCAGCAGCAACAGCAGCAGCCGCAACAACCGAGCGCACCGTCGAGCCCAACGCAACGGCAACATGGTGCCGCCACCTCAGTCACATCCGCAGTCCATCCGTCCAACACACCCCAAATGTTTGCCCAGCAGCAGCAGCAGCAGCATTCCTTCGATCAGTCGCAACTGCTCAT GATGGGCGATTGCTACCAGAATCTGCAACCAAAGCAACCGATGCTGGCGCACAGC TCGCCACCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCCTACCAGCAGAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAGCAGCAGCACCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGGCATTGCCGCGAAACCGCCCTCGGTTGTGGCGATGGCTTCGGTGAAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AL931653             [                                                                                                                                                                                                                                                                                                                                                                                                         aatcGCCCGAGGT GTTGATTCCATTCGCGTGCGCTA CCGAACCTCTTCCCACAGCAACAG   CAGCAGCAGCCGCAACAACCGAGCGCACCGTCGAGCCCAACGCAACGGCAACATGGTGCCGCCACCTCAGTCACATCCGCAGTCCATCCGTCCAACACACCCCAAATGTTTGCCCAGCAGCAGCAGCAGCAGCATTCCTTCGATCAGTCGCAACTGCTCAT GATGGGCGATTGCTACCAGAATCTGNAA CAAAGCAACCGATGCTGGCGCACAGC TCGCCACCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCCTACCAGCAGAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAGCAGCAGCACCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGCCATTGCCGCGAAACCGCCCTCGGTTGTGGCGATGGCCTCGGTCAAGCTGAAACCCGTCGCTACGGGCTCGCTGGACGTACCGGACGCAGCCGGAGGGGAGCTGTACTCCAACGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM610121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGGCAGCAGCAGCAGCAGCATTCCTTCGATCAGTCGCAACTGCTCAT GATGGGCGATTGCTACCAGAATCTGCAACCAAAGCAACCGATGCTGGCGCACAGC TCGCCACCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCCTACCAGCAGAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAGCAGCAGCACCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGCCATTGCCGCGAAACCGCCCTCGGTTGTGGCGATGGCCTCGGTCAAGCTGAAACCCGTCGCTACGGGCTCGCTGGACGTACCGGACGCAGCCGGAGGGGAGCTGTACTCCAACGCACCGCACGCAACGTCGCCCGGGCCGAACGGTGCCAATGCGGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCGTGCAGGAAAATTTGCTTGCCGCCAACAACCAGAAGGTCATGGCCACGAACAAGCTCAGCGGTTAGGGTGGCTAAGAA AATGCGATCGTTGGTTTGAGATTGCTTCATGCTCATCATACTCATTTATTTTCCCCAATTATGATGTTGTGCGTGCTTTTTGCGAGGTGTCTTC TTTTTTTAGAAAAGAAAATAGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM600356             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGCCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCCTACCAGCAGAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAGCAGCAGCACCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGCCATTGCCGCGAAACCGCCCTCGGTTGTGGCGATGGCTTCGGTGAAGCTGAAACCCGTCGCTACGGGCTCGCTGGACGTACCGGACGCTGCCGGAGGGGAGCTGTACTCCAACGCACCGCACGCAACGTCGCCCGGGCCGAACGGTGCCAACGCGGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCGTGCAGGAAAATTTGCTTGCCGCCAACAACCAGAAGGTTATGGCCACGAACAAGCTCAGCGGTTAGGGTGGTTACGAATAATGCGATCGTTGGTTTGAGATTGCTTCGTGCTCATCATACTCATTTATTTTCCTCAATTCTGATGTTGTGCGTGCTTTTTGCGAGGTGTCTTCTTTTTTTTAGAAAAGAAAATAGTGAAATAATGAAACAGTACGTGAACACGCAGGCTGAAATGGCATATAGAGAACGCTATGGTAGAGAAGAAATGCTCGCTAATATAACCTCTCGTCAGTACAGTACTTGAAATCGAATCGAACTGCTTGGTAAGGTGATAGCTTCTTACCGTACGATAAGCGTAGGATG                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX609407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATGCGGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCGTGCAGGAAAATTTGCTTGCCGCCAACAACCAGAAGGTCATGGCCACGAACAAGCTCAGCGGTTAGGGTGGCTAAGAA AATGCGATCGTTGGTTTGAGATTGCTTCATGCTCATCATACTCATTTATTTTCCCCAATTATGATGTTGTGCGTGCTTTTTGCGAGGTGTCTTC TTTTTTTAGAAAAGAAAATAGTGAAATAATGAAACTGTACGTGAACATGCAGGCTGAAATGGCAAATAGAG   G TACGGTAGAGGAGAAATGCTCGCTAATATAACCACTCTTCAGTACAGTACTTGAAATCGAATCGAACTGCTTGGTAAGGTGATAGCTTCTTACCGTACGATAAGCGTAGGATGGATCTAGAATCGTAGAAGC AAACAGTTATCGCATACAAAGCTGAAATTTCCGGAAATGATGCAATTGTGAAGAGAAACAGAAAGGTAGGAAGAGTCATTTGCACACCTGCCGGGATGCGTGTACGCTAGATATGCTAGAATT AAAAGCATAATTTTATTGTATTAGTTCGGAA AAACGCTGCATAATTCTGTTGGTGTACGCCTATTCCACGCTGAGGCGCAGTATGACGGCACACCAATATGATG ACCATGATAATAATGACACGCAAGGA GATATCATCGTTTGTGAATGGAAGGGATTTTT TTTAC AATA AA A AAGAGA ACAATTATG           ]
[-] EMBL BX619871             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAATGAAACTGTACGTGAACATGCAGGTTGAAATGGCATATAG G   GCTACGGTAGAGGAGAAATGCTCGCTAATATAACCACTCTTCAGTACAGTACTTGAAATCGAATCGAACTGCTTGGTAAGGTGATAGCTTCTTACCGTACGATAAGCGTAGGATGGATCTAGAAACGTAGAAGCNAAACAGTTATCGCATACAAAGCTGAAATTTCCGGAAATGATGCAATTTTGAAGAGAAACAGAAAGGTAGGAAGAGTCATTTGCACACCTGCCGGGCTGCGTGTACGCTAGATATGCTAGAATTNAAAAGCATAATTTTATTGTATTAGTTCGGAATAAGCGCTGCATAATTCTGTTGGTGTACGCCTATTCCACGCTGAGGCGCAGTATGACGGCACACCAATATGATGNACCATGATAATAATGACACGCAAGGANGATATCATCGTTTGTGAATGGAAGGGATTTTTGTTTACTAATACAATAGAAGAGANACAATTATGGACATGACATG]




>consensus_8117#0
CCGCCCACGCGTCCGAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACG
ATATGGTGTACAACGCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAGGGCG
TGGATCGGGCACAGGCGGTCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGC
GCGCCCTGCTCGGGGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGG
AAGTAGAGATGGCACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGC
GGCTGGCACAGCAGTATAGCGAAACGACACTGGATGCTGAGTATCGAAAAAGCATGCTGT
CGGCGGCTCACGTACTCGCAATGGATGCCAAAAACCTGCTCGACGTGTCGATTCCATTCG
TGTGCGCTACCGAACCTCTTCCCACAGCAGCAGCAGCAGCAGCCGCAACAACCGAGCGCA
CCGTCGAGCCCAACGCAACGGCAACATGGTGCCGCCACCTCAGTCACATCCGCAGTCCAT
CCGTCCAACACACCCCAAATGTTTGCCCAGCAGCAGCAGCAGCAGCATTCCTTCGATCAG
TCGCAACTGCTCATGATGGGCGATTGCTACCAGAATCTGCAACCAAAGCAACCGATGCTG
GCGCACAGCTCGCCACCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCC
TACCAGCAGAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAG
CAGCAGCACCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGCCATTGCCGCGAAA
CCGCCCTCGGTTGTGGCGATGGCTTCGGTGAAGCTGAAACCCGTCGCTACGGGCTCGCTG
GACGTACCGGACGCAGCCGGAGGGGAGCTGTACTCCAACGCACCGCACGCAACGTCGCCC
GGGCCGAACGGTGCCAATGCGGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCGTG
CAGGAAAATTTGCTTGCCGCCAACAACCAGAAGGTCATGGCCACGAACAAGCTCAGCGGT
TAGGGTGGCTAAGAAAATGCGATCGTTGGTTTGAGATTGCTTCATGCTCATCATACTCAT
TTATTTTCCCCAATTATGATGTTGTGCGTGCTTTTTGCGAGGTGTCTTCTTTTTTTAGAA
AAGAAAATAGTGAAATAATGAAACTGTACGTGAACATGCAGGCTGAAATGGCATATAGAG
GCTACGGTAGAGGAGAAATGCTCGCTAATATAACCACTCTTCAGTACAGTACTTGAAATC
GAATCGAACTGCTTGGTAAGGTGATAGCTTCTTACCGTACGATAAGCGTAGGATGGATCT
AGAATCGTAGAAGCAAACAGTTATCGCATACAAAGCTGAAATTTCCGGAAATGATGCAAT
TGTGAAGAGAAACAGAAAGGTAGGAAGAGTCATTTGCACACCTGCCGGGATGCGTGTACG
CTAGATATGCTAGAATTAAAAGCATAATTTTATTGTATTAGTTCGGAAAAACGCTGCATA
ATTCTGTTGGTGTACGCCTATTCCACGCTGAGGCGCAGTATGACGGCACACCAATATGAT
GACCATGATAATAATGACACGCAAGGAGATATCATCGTTTGTGAATGGAAGGGATTTTTT
TTACAATAAAAAAGAGAACAATTATGGACATGACATG

consensusID : consensus_8117#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 647
fasta sequence 
                              [CCGGTCCGGACCGCAGAGTTTGGGTGATCACTATCCCACCACACCGAACACGAGCGATTCGAGGCCTCACACACCAGGATCGGGCGGTGGTGGCGGTGGCGGCGGTATGATCAAATCGAAGAGCTCCTCGATGGAGCGCTGCACGACGCCACAGTCGGGCGACGAGAAGTTTGCGGTGAAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAACGCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAGGGTGTGGATCGGGCACAGGCGGCCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGGGGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGAAGTAGAGATGGCACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGCAGTATAGCGAAACGACACTGGATGCCGAATATCGAAAAAGCATGCTGTCGGCGGCTCACGTACTTGCAATGGATGCCAAAAACCTGCTCGACGTCGTCGATTCCATTCGCGTGCGCTACCCGAACCTCTTCCCAAAGCAACAGCAGCAACAACAACAATAACATTTTGAAG]

[+] EMBL BM632617             [CCGGTCCGGACCGCAGAGTTTGGGTGATCACTATCCCACCACACCGAACACGAGCGATTCGAGGCCTCACACACCAGGATCGGGCGGTGGTGGCGGTGGCGGCGGTATGATCAAATCGAAGAGCTCCTCGATGGAGCGCTGCACGACGCCACAGTCGGGCGACGAGAAGTTTGCGGTGAAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAACGCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAGGGTGTGGATCGGGCACAGGCGGCCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGGGGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGAAGTAGAGATGGCACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGCAGTATAGCGAAACGACACTGGATGCCGAATATCGAAAAAGCATGCTGTCGGCGGCTCACGTACTTGCAATGGATGCCAAAAACCTGCTCGACGTCGTCGATTCCATTCGCGTGCGCTACCCGAACCTCTTCCCAAAGCAACAGCAGCAACAACAACAATAACATTTTGAAG]




>consensus_8117#1
CCGGTCCGGACCGCAGAGTTTGGGTGATCACTATCCCACCACACCGAACACGAGCGATTC
GAGGCCTCACACACCAGGATCGGGCGGTGGTGGCGGTGGCGGCGGTATGATCAAATCGAA
GAGCTCCTCGATGGAGCGCTGCACGACGCCACAGTCGGGCGACGAGAAGTTTGCGGTGAA
GAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAACGC
CACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAGGGTGTGGATCGGGCACAGGC
GGCCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGGGGC
GGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGAAGTAGAGATGGCACA
CAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGCAGTA
TAGCGAAACGACACTGGATGCCGAATATCGAAAAAGCATGCTGTCGGCGGCTCACGTACT
TGCAATGGATGCCAAAAACCTGCTCGACGTCGTCGATTCCATTCGCGTGCGCTACCCGAA
CCTCTTCCCAAAGCAACAGCAGCAACAACAACAATAACATTTTGAAG

consensusID : consensus_8117#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence 
                              [AGCAGATCGCCCGCGGTGTAAGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCTGTGCAGGAAAATTTGCTTGCCGCCAACGAACCAGAAGGTTATGGCCACGAACAAGCTCAGCGGTTAGGGTGGTTACGAATAATGCGATCGCTTGGCTTTGAGCATTGCTTCGTGCTCATCATACTCATTTATTTTCCCCAATTCTGATGTTGTGCGTGCCTTTTTGCGAGAGTGTACTTACTTTCTANATACTTNTTAGCAAAAGGCACAAATANGTGACAATCAATGGAAACTGTACGTGAACATGCAGGTTTGAAATTGGGCATATAGGGGGCTAACGGCTAAGGCAACGGAGAACATTGCTTCGGCCTCAAGTATAACCCAGCTACTTTACAGGTAACAGGTTAACCTTATTGANAGAACAACTCCGAAAATTACNCGGAATCAANCCTTTGGACCCTTATTGGCGCGTTTACAACAACGGGGCTTGCGACATTAACTGNCCTTTAGTGCCCTTCTTNAAGCCCCCATGGTTTAAACCGGAAACGTGTAAAAAACGCGGACCAGGGTTTAACGGAGNGCAACTTTCGGGCGGACATTTCCCTTTCAANGGCAA]

[+] EMBL AL696852             [AGCAGATCGCCCGCGGTGTAAGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCTGTGCAGGAAAATTTGCTTGCCGCCAACGAACCAGAAGGTTATGGCCACGAACAAGCTCAGCGGTTAGGGTGGTTACGAATAATGCGATCGCTTGGCTTTGAGCATTGCTTCGTGCTCATCATACTCATTTATTTTCCCCAATTCTGATGTTGTGCGTGCCTTTTTGCGAGAGTGTACTTACTTTCTANATACTTNTTAGCAAAAGGCACAAATANGTGACAATCAATGGAAACTGTACGTGAACATGCAGGTTTGAAATTGGGCATATAGGGGGCTAACGGCTAAGGCAACGGAGAACATTGCTTCGGCCTCAAGTATAACCCAGCTACTTTACAGGTAACAGGTTAACCTTATTGANAGAACAACTCCGAAAATTACNCGGAATCAANCCTTTGGACCCTTATTGGCGCGTTTACAACAACGGGGCTTGCGACATTAACTGNCCTTTAGTGCCCTTCTTNAAGCCCCCATGGTTTAAACCGGAAACGTGTAAAAAACGCGGACCAGGGTTTAACGGAGNGCAACTTTCGGGCGGACATTTCCCTTTCAANGGCAA]




>consensus_8117#2
AGCAGATCGCCCGCGGTGTAAGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCTGT
GCAGGAAAATTTGCTTGCCGCCAACGAACCAGAAGGTTATGGCCACGAACAAGCTCAGCG
GTTAGGGTGGTTACGAATAATGCGATCGCTTGGCTTTGAGCATTGCTTCGTGCTCATCAT
ACTCATTTATTTTCCCCAATTCTGATGTTGTGCGTGCCTTTTTGCGAGAGTGTACTTACT
TTCTANATACTTNTTAGCAAAAGGCACAAATANGTGACAATCAATGGAAACTGTACGTGA
ACATGCAGGTTTGAAATTGGGCATATAGGGGGCTAACGGCTAAGGCAACGGAGAACATTG
CTTCGGCCTCAAGTATAACCCAGCTACTTTACAGGTAACAGGTTAACCTTATTGANAGAA
CAACTCCGAAAATTACNCGGAATCAANCCTTTGGACCCTTATTGGCGCGTTTACAACAAC
GGGGCTTGCGACATTAACTGNCCTTTAGTGCCCTTCTTNAAGCCCCCATGGTTTAAACCG
GAAACGTGTAAAAAACGCGGACCAGGGTTTAACGGAGNGCAACTTTCGGGCGGACATTTC
CCTTTCAANGGCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8117#0      ------------------------------------------------------------
consensus_8117#1      --CCGGTCCGGACCGCAGAGTTTGGGTGATCACTATCCCACCACACCGAACACGAGCGAT 58
consensus_8117#2      AGCAGATC--GCCCGCGGTGTAAGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCT 58
                                                                                  

consensus_8117#0      ------------------------------------------------------------
consensus_8117#1      TCGAGGCCTCACACACCAGGATCGGGCGGTGGTGGCGGTGGCGGCGGTATGATCAAATCG 118
consensus_8117#2      GTGCAGGAAAATTTGCTTGCCGCCAACGAACCAGAAGGTTATGGC--CACGAACAAGCTC 116
                                                                                  

consensus_8117#0      ----------------------------------------------CCGCCCACGCGTCC 14
consensus_8117#1      AAGAGCTCCTCGATGGAGCGCTGCACGACGCCACAGTCGGGCGACGAGAAGTTTGCGGTG 178
consensus_8117#2      AGCGGTT----AGGGTGGTTACGAATAATGCGATCGCTTGGCTTTGAGCATTGCTTCGTG 172
                                                                                  

consensus_8117#0      GAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAAC 74
consensus_8117#1      AAGAAGGTGGAACCAACCAAAACGATGCCGCTCGATCGGACGAACGATATGGTGTACAAC 238
consensus_8117#2      CTCA--------TCATACTCATTTATTTTCCCCAATT---CTGATGTTGTG-CGTGCCTT 220
                         *         **  *  *   **    * * **    *  * * * **  ** *   

consensus_8117#0      GCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAG-GGCGTGGATCGGGCACA 133
consensus_8117#1      GCCACGACCAGTGTGGTGAAGTCGATCATGGCCCTCAGCCAG-GGTGTGGATCGGGCACA 297
consensus_8117#2      TTTGCGAG-AGTGTACTTACTTTCTANATACTTNTTAGCAAAAGGCACAAATANGTGACA 279
                          ***  *****  * *  *     **     * *** *  **     **  *  ***

consensus_8117#0      GGCGGTCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGG 193
consensus_8117#1      GGCGGCCGAATATTTGAATCTGGTGCGAAACGTTGGCTTTGAGCTGCGCGCCCTGCTCGG 357
consensus_8117#2      ATCAATGGAAA--CTGTACGTGA----ACATGCAGGTTTGAAATTGGGCATATAGG--GG 331
                        *    ***    ** *  **     * * *  ** **  *  ** **     *   **

consensus_8117#0      GGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGA-AGTAGAGATGG 252
consensus_8117#1      GGCGGTCGATCAGCTGTCGGCCAACTTTCCTCCACAGCGCTACAAGGA-AGTAGAGATGG 416
consensus_8117#2      GCTAACGGCTAAGGCAACGGAGAACATTGCTTCG----GCCTCAAGTATAACCCAGCTAC 387
                      *      * * **    ***  *** ** ** *     **  **** * *    ** *  

consensus_8117#0      CACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGC 312
consensus_8117#1      CACACAAAGTATTATCCAAAGACATGTATGAACTAGTTACGGCCATGCGGCTGGCACAGC 476
consensus_8117#2      TTTACAGGTAACAGGTTAACCTTATTGANAGAACAACTCCGAAAATTACNCGGAATCAAN 447
                         ***    *      **    **  *   *  *  * **   **    * *   **  

consensus_8117#0      AGTATAGCGAAACGACACTGGATGCTGAGTATCGAAAAAGCATGCTGTCGGCGGCTCACG 372
consensus_8117#1      AGTATAGCGAAACGACACTGGATGCCGAATATCGAAAAAGCATGCTGTCGGCGGCTCACG 536
consensus_8117#2      CCTTTGG-------ACCCTTATTGGCGCGTTTACAACAACGGGGCTTGCGACA-TTAACT 499
                        * * *       ** **   **  *  * *  ** **    ***  ** *   * ** 

consensus_8117#0      TACTCGCAATGGATGCCAAAAACCTGCTCGACGT-GTCGATTCCATTCGTGTGCGCTACC 431
consensus_8117#1      TACTTGCAATGGATGCCAAAAACCTGCTCGACGTCGTCGATTCCATTCGCGTGCGCTACC 596
consensus_8117#2      GNCCTTTAGTGCCCTTCTTNAAGC--CCCCATGGTTTAAACCGGAAACGTGTAAAAAACG 557
                        *    * **     *   ** *  * * * *   *  *    *  ** **     ** 

consensus_8117#0      -GAACCTCTTCCCACAGCAGCAGCAGCAGCAGC--CGCAACAACCGAGCGCACCGTCGAG 488
consensus_8117#1      CGAACCTCTTCCCAAAGCAACAGCAGCAACAAC--AACAATAACATTTTGAAG------- 647
consensus_8117#2      CGGACCAGGGTTTAACGGAGNGCAACTTTCGGGCGGACATTTCCCTTTCAANGGCAA--- 614
                       * ***       *  * *     *    *       **    *                

consensus_8117#0      CCCAACGCAACGGCAACATGGTGCCGCCACCTCAGTCACATCCGCAGTCCATCCGTCCAA 548
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CACACCCCAAATGTTTGCCCAGCAGCAGCAGCAGCAGCATTCCTTCGATCAGTCGCAACT 608
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GCTCATGATGGGCGATTGCTACCAGAATCTGCAACCAAAGCAACCGATGCTGGCGCACAG 668
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CTCGCCACCGACGTCGCTCACACATTCCTATGAACCGGGAGGCCTCTCCTCCTACCAGCA 728
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GAGCGGTATCTACGACAATGAGTGCATCATCAGCAGCCAGCAGCAGCAACAGCAGCAGCA 788
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CCAGTCTGCCGAGGTTACTGGCAAGCTAAAGAAACCGGCCATTGCCGCGAAACCGCCCTC 848
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GGTTGTGGCGATGGCTTCGGTGAAGCTGAAACCCGTCGCTACGGGCTCGCTGGACGTACC 908
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GGACGCAGCCGGAGGGGAGCTGTACTCCAACGCACCGCACGCAACGTCGCCCGGGCCGAA 968
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CGGTGCCAATGCGGACATTAAGCTGCCCGATCCCGTCTCGTGCACGATCGTGCAGGAAAA 1028
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TTTGCTTGCCGCCAACAACCAGAAGGTCATGGCCACGAACAAGCTCAGCGGTTAGGGTGG 1088
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CTAAGAAAATGCGATCGTTGGTTTGAGATTGCTTCATGCTCATCATACTCATTTATTTTC 1148
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CCCAATTATGATGTTGTGCGTGCTTTTTGCGAGGTGTCTTCTTTTTTTAGAAAAGAAAAT 1208
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AGTGAAATAATGAAACTGTACGTGAACATGCAGGCTGAAATGGCATATAGAGGCTACGGT 1268
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AGAGGAGAAATGCTCGCTAATATAACCACTCTTCAGTACAGTACTTGAAATCGAATCGAA 1328
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CTGCTTGGTAAGGTGATAGCTTCTTACCGTACGATAAGCGTAGGATGGATCTAGAATCGT 1388
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AGAAGCAAACAGTTATCGCATACAAAGCTGAAATTTCCGGAAATGATGCAATTGTGAAGA 1448
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GAAACAGAAAGGTAGGAAGAGTCATTTGCACACCTGCCGGGATGCGTGTACGCTAGATAT 1508
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GCTAGAATTAAAAGCATAATTTTATTGTATTAGTTCGGAAAAACGCTGCATAATTCTGTT 1568
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GGTGTACGCCTATTCCACGCTGAGGCGCAGTATGACGGCACACCAATATGATGACCATGA 1628
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TAATAATGACACGCAAGGAGATATCATCGTTTGTGAATGGAAGGGATTTTTTTTACAATA 1688
consensus_8117#1      ------------------------------------------------------------
consensus_8117#2      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AAAAAGAGAACAATTATGGACATGACATG 1717
consensus_8117#1      -----------------------------
consensus_8117#2      -----------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)