cluster # 8203

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Anopheles gambiae
cluster # 8203 cluster # 8203 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8203#0 length = 974 sequences # 8

consensus_8203#1 length = 615 sequences # 1

consensusID : consensus_8203#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 974
fasta sequence

                              [GGGCCAAGAATTCCGGCACGAGGGGTTTCTCGCACGGGAGCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAG-AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAA-GCGCTGCTGCA-GCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAA-TCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGACATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCC-GGCATCCAGCAGACCAGCTCGATGGCGGACACGCAAGCGCTGGTGGCTGCCGTCGGGCTGGGCAATGGGTTGACCGCACCGGTGGGTCCGCCGACCGGGGCGGGCGTAATGATTCCACCCGCGATCCGGCAGGGCTCGCCGATGAGTGCCGTTTCCCCGTCCGGCAATGCGCCGATGGGCAAAATGCCGTCCGGCATCAAGACAAACATCAAGTCCGCCAACCAGGTGCATCCGTACCGTTAGCAGTGTACGCTCTCTGTGAAATGCGCATTAGCTTGTATTGAAAATAAACACAAAATCTTCTATCTTTACTCTAAAAAACA]

[+] EMBL BX468467             [GGGCCAAGAATTCCGGCACGAGGGGTTTCTCGCACGGGAGCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAG AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAA GCGCTGCTGCA GCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAA TCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGACATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCCGGGCATCC                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX469163             [           gatcGCACGAGGTGTTTCTCGCACGGGAGCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAG AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAAGGCGCTGCTGCAGGCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAAGTCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATC                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM602876             [                                       GCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAG AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAA GCGCTGCTGCA GCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAA TCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGACATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCC GGCATCCAGCAGACCAGCTCGATGGCGGACACGCAAGCG                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX619055             [                                         GTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAG AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAA GCGCTGCTGCA GCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAA TCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGACATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCC GGCATCCAGCAGACCAGCTCGATGGCGGACACGCAAGCGCTGGTGGCTGCCGTCGGGCTGGGCAATGGGTTGACCGCACCGGTGGGTCCGCCGACCGGGGCGGGCGTAATGATTCCACCCGCGATCCG                                                                                                                                                                                                   ]
[+] EMBL BX610086             [                                                TCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAG AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAA GCGCTGCTGCA GCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAA TCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGACATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCC GGCATCCAGCAGACCAGCTCGATGGCGGACACGCAAGCGCTGGTGGCTGCCGTCGGGCTGGGCAATGGGT                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09BNT             [                                                                                                       TGTTTTAAACTGTGAGAAAGGATCCACCAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGCTGGACATGCTGCTGGAAGCTGTCCTGAACCGGCTGAACGATCTGAAACATTCGATTGGCGTGATGATACACCGACTGGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCTGAGCGGGACGAG GCGCTGCTGCA GCTAACTGAGGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCAAACAA TCTCACCGTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGACATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCC GGCATCCAGCAGACCAGCTCGATGGCGGACACGCAAGCGCTGGTGGCTGCCGTCGGGCTGGGCAACGGGTTGACCGCAAAAAAAGGTCCGCCGCCCGG                                                                                                                                                                                                                                 ]
[+] EMBL AGA285751            [                                                                                                              AACTGTGAG AAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAA GCGCTGCTGCA GCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGACCCGGGCGCCGAAAGCCGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AGA284444            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGGCAATGGGTTGACCGCACCGGTGGGTCCGCCGACCGGGGCGGGCGTAATGATTCCACCCGCGATCCGGCAGGGCTCGCCGATGAGTGCCGTTTCCCCGTCCGGCAATGCGCCGATGGGCAAAATGCCGTCCGGCATCAAGACAAACATCAAGTCCGCCAACCAGGTGCATCCGTACCGTTAGCAGTGTACGCTCTCTGTGAAATGCGCATTAGCTTGTATTGAAAATAAACACAAAATCTTCTATCTTTACTCTAAAAAACA]




>consensus_8203#0
GGGCCAAGAATTCCGGCACGAGGGGTTTCTCGCACGGGAGCGTTGCATTCTCTATTTCCT
ACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAGA
AGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTG
GAAGCTGTCCTGAACCGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCGA
CTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAATA
TCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGC
AATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAAGCGCTGCTGCAGCTA
ACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAG
CCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAATCTCACC
GTGGAGGCAAGCATGAAACAGGTCGCCCAGTACAACAAGGTCATATCGCACGTGTGGGAC
ATCATCAGCAAGGCGAAGGAGGACTGGGAGAATGAATCGTCCACCCGGCCCGGCATCCAG
CAGACCAGCTCGATGGCGGACACGCAAGCGCTGGTGGCTGCCGTCGGGCTGGGCAATGGG
TTGACCGCACCGGTGGGTCCGCCGACCGGGGCGGGCGTAATGATTCCACCCGCGATCCGG
CAGGGCTCGCCGATGAGTGCCGTTTCCCCGTCCGGCAATGCGCCGATGGGCAAAATGCCG
TCCGGCATCAAGACAAACATCAAGTCCGCCAACCAGGTGCATCCGTACCGTTAGCAGTGT
ACGCTCTCTGTGAAATGCGCATTAGCTTGTATTGAAAATAAACACAAAATCTTCTATCTT
TACTCTAAAAAACA

consensusID : consensus_8203#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 615
fasta sequence

                              [AATNGCCGAGGTCACGGGAGCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAGAAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCTGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCTGACTCGAGACGGAATACGAGACGATTAACTGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAAGCGCTGCTGCAGCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGANCCGGGCGCGGAAAGCCGGCAGGCGGACACCGAAGCGAAGGCGAACAATCTCACCGTGGAGTGCCAAGCCATTGAACACAGGTCGCCCAGTACAACAAGGGTTCATATTCGCACGTGTTGGGACATCATCAGCAAGGCGAANNGAGGAC]

[+] EMBL AL931287             [AATNGCCGAGGTCACGGGAGCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAGAAGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCTGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCTGACTCGAGACGGAATACGAGACGATTAACTGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAAGCGCTGCTGCAGCTAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGANCCGGGCGCGGAAAGCCGGCAGGCGGACACCGAAGCGAAGGCGAACAATCTCACCGTGGAGTGCCAAGCCATTGAACACAGGTCGCCCAGTACAACAAGGGTTCATATTCGCACGTGTTGGGACATCATCAGCAAGGCGAANNGAGGAC]




>consensus_8203#1
AATNGCCGAGGTCACGGGAGCGTTGCATTCTCTATTTCCTACCAAAAAATCTTGATTTAA
GTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAGAAGGATTCAACAAACCAAACG
CAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTGGAAGCTGTCCTGAACCTGTC
TGAACGACCTGAAACATTCGATTGGCGTGATGATACACCTGACTCGAGACGGAATACGAG
ACGATTAACTGCCCACGTTTCTGGACAACTTTGCACTAATATCCAGCCATCTCACTGGGT
TGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGCGCAATCTGACCGTGCTGCCGC
TGATGCTAACGCCCGAGCGGGACGAAGCGCTGCTGCAGCTAACCGAAGGCCGTGTGCCGA
TCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGAAGCCGGANCCGGGCGCGGAAA
GCCGGCAGGCGGACACCGAAGCGAAGGCGAACAATCTCACCGTGGAGTGCCAAGCCATTG
AACACAGGTCGCCCAGTACAACAAGGGTTCATATTCGCACGTGTTGGGACATCATCAGCA
AGGCGAANNGAGGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8203#0      GGGCCAAGAATTCCGGCACGAGGGGTTTCTCGCACGGGAGCGTTGCATTCTCTATTTCCT 60
consensus_8203#1      --------------------AATNGCCGAGGTCACGGGAGCGTTGCATTCTCTATTTCCT 40
                                          *   *       ****************************

consensus_8203#0      ACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAGA 120
consensus_8203#1      ACCAAAAAATCTTGATTTAAGTCCCATTCCCGAGCAATGCTAGTGTTTTAAACTGTGAGA 100
                      ************************************************************

consensus_8203#0      AGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTG 180
consensus_8203#1      AGGATTCAACAAACCAAACGCAACATGCAGCGCGAGGAAAAGCAGTTGGACATGCTGCTG 160
                      ************************************************************

consensus_8203#0      GAAGCTGTCCTGAACC-GTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACC- 238
consensus_8203#1      GAAGCTGTCCTGAACCTGTCTGAACGACCTGAAACATTCGATTGGCGTGATGATACACCT 220
                      **************** ****************************************** 

consensus_8203#0      GACTCGAGACGGAATACGAGACGATTAACTGGCCCACGTTTCTGGACAACTTTGCACTAA 298
consensus_8203#1      GACTCGAGACGGAATACGAGACGATTAACTG-CCCACGTTTCTGGACAACTTTGCACTAA 279
                      ******************************* ****************************

consensus_8203#0      TATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGC 358
consensus_8203#1      TATCCAGCCATCTCACTGGGTTGATGAAAATCCTAAGCACGGAAATCGGCACACCACTGC 339
                      ************************************************************

consensus_8203#0      GCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAAGCGCTGCTGCAGC 418
consensus_8203#1      GCAATCTGACCGTGCTGCCGCTGATGCTAACGCCCGAGCGGGACGAAGCGCTGCTGCAGC 399
                      ************************************************************

consensus_8203#0      TAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGA 478
consensus_8203#1      TAACCGAAGGCCGTGTGCCGATCTTTTCGCACGATCTCGCTCCGGACTATCTGCGCACGA 459
                      ************************************************************

consensus_8203#0      AGCCGGACCCGGGCGCGGAAAGCCGGCAGGCGGCACACGAAGCGAAGGCGAACAATCTCA 538
consensus_8203#1      AGCCGGANCCGGGCGCGGAAAGCCGGCAGGCGGACACCGAAGCGAAGGCGAACAATCTCA 519
                      ******* *************************    ***********************

consensus_8203#0      CCGTGGAGG--CAAGCA--TGAA-ACAGGTCGCCCAGTACAACAAGG--TCATAT-CGCA 590
consensus_8203#1      CCGTGGAGTGCCAAGCCATTGAACACAGGTCGCCCAGTACAACAAGGGTTCATATTCGCA 579
                      ********   *****   **** ***********************  ****** ****

consensus_8203#0      CGTGT-GGGACATCATCAGCAAGGCGAAGG-AGGACTGGGAGAATGAATCGTCCACCCGG 648
consensus_8203#1      CGTGTTGGGACATCATCAGCAAGGCGAANNGAGGAC------------------------ 615
                      ***** **********************   *****                        

consensus_8203#0      CCCGGCATCCAGCAGACCAGCTCGATGGCGGACACGCAAGCGCTGGTGGCTGCCGTCGGG 708
consensus_8203#1      ------------------------------------------------------------
                                                                                  

consensus_8203#0      CTGGGCAATGGGTTGACCGCACCGGTGGGTCCGCCGACCGGGGCGGGCGTAATGATTCCA 768
consensus_8203#1      ------------------------------------------------------------
                                                                                  

consensus_8203#0      CCCGCGATCCGGCAGGGCTCGCCGATGAGTGCCGTTTCCCCGTCCGGCAATGCGCCGATG 828
consensus_8203#1      ------------------------------------------------------------
                                                                                  

consensus_8203#0      GGCAAAATGCCGTCCGGCATCAAGACAAACATCAAGTCCGCCAACCAGGTGCATCCGTAC 888
consensus_8203#1      ------------------------------------------------------------
                                                                                  

consensus_8203#0      CGTTAGCAGTGTACGCTCTCTGTGAAATGCGCATTAGCTTGTATTGAAAATAAACACAAA 948
consensus_8203#1      ------------------------------------------------------------
                                                                                  

consensus_8203#0      ATCTTCTATCTTTACTCTAAAAAACA 974
consensus_8203#1      --------------------------