cluster # 8240

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Anopheles gambiae
cluster # 8240 cluster # 8240 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8240#0 length = 1362 sequences # 6
consensus_8240#1 length = 719 sequences # 1

consensus_8240#2 length = 676 sequences # 1
consensus_8240#3 length = 591 sequences # 1

consensusID : consensus_8240#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1362
fasta sequence

                              [CTGGTGCACGTA-GATTTG-CTCGCCTGATCGTTATCGTAGGACCAA-GGTCGATATTGGACTCAATTTGTAAAAAAATAAACTTTGGGCATGGGAATAAACGAATCTCTCGTGGGCGAAAAACTTCACTGGCGAAGTTAAGCTAGTCTTCTACGATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAGTATTCTTAAATTTCTCAACTACCAGACGGACGAGGAGCTGCTGGCGTGTGCCCTCATGCGAAAGGAAGGCATTTACCGGCGCAAGAAGCGCATTCTGCAGTTCGATCCGTACAGTCCGGCAATGCACGCAGCAATTGACGAAAAGCGTGCCGAAGTGTACGCAGCCCTCGGCCGCTACGACGCACACTAAGCAAAATCAGTGGCTGTAATTGTGATGTATGGTTTCGATTGGTTTAGGCTAATTGGTTTTGAACGAATTATTTCTTAACAATAGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTCCCGCACAAAACGAAACAAACGAACGTGGACCCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTCACCACGTGCAATCGCGATAGCGTGAGCATGGTGCCCAGTTTTGTACAGCCATTTCCTGTTTGTTACTGTAATTAGCGAAACACATTCTAGTCAGCAAGGGAATCCCGATTATGTTGCCATTCGAGCTGTCCCGCAAGTCGCGACGGATCCGTAGCCAAGCGCCAAAACATGTCTTAAACGTAAACCAAAGTAATGTAGCACGATTTACCAGGCTAAACTATATAGGAAGCTAAAGGGCACGGCAACACACCTCCCTACAAAACCGTTCACGACGTAGAGAGCAACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGTAAGACTTTTAGGAGCAACCTAGGAACAATAGCTACCACATAAGCATACGTACACGTAGGTAAGCGGGGGCAGTATTCATTTGTACTATTAGAATTGTATGCGCGATTTTACTACCATTCATGACAAGCGAGGACAGTGCAAGAAAGGGAAGCTAAATGGTACATAAAAAGTATAAATCACCAACGCATAACGATTAGTAATCCTGTTCCAATGGTTGGAGCAACCGAGAACTAACACAATGTATGATAGCATTGGGCTGGTGTAAACGGATGTGCATTATGTGTAGACACCAGAGCAGAACGAAAAAGAAATAAACAATATTTAGAGGTGTTCAAAAAAAAA]

[+] EMBL AL934676             [CTGGTGCACGTA GATTTG CTCGCCTGATCGTTATCGTAGGACCAA GGTCGATATTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX616031             [      CACGTAGGATTTGCCTCGCCTGATCGTTATCGTAGGACCAAGGGTCGATATTGGACTCAATTTGTAAAAAAATAAACTTTGGGCATGGGAATAAACGAATCTCTCGTGGGCGAAAAACTTCACTGGCGAAGTTAAGCTAGTCTTCTACGATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAGTATTCTTAAATTTCTCAACTACCAGACGGACGAGGAGCTGCTGGCGTGTGCCCTCATGCGAAAGGAAGGCATTTACCGGCGCAAGAAGCGCATTCTGCAGTTCGATCCGTACAGTCCGGCAATGCACGCAGCAATTGACGAAAAGCGTGCCGAAGTGTACGCAGCCCTCGGCCGCTACGACGCACACTAAGCAAAATCAGTGGCTGTAATTGTGATGTATGGTTTCGATTGGTTTAGGCTAATTGGTTTTGAACGAATTATTTCTTAACAATAGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTCCCGCACAAAACGAAACAAACGAACGTGGACCCGATTTTTAAAGCTTCCATTATTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX617871             [                                                                                                                                                                                                 ATTCTTAAATTTCTCAACTACCAGACGGACGAGGAGCTGCTGGCGTGTGCCCTCATGCGAAAGGAAGGCATTTACCGGCGCAAGAAGCGCATTCTGCAGTTCGATCCGTACAGTCCGGCAATGCACGCAGCAATTGACGAAAAGCGTGCCGAAGTGTACGCAGCCCTCGGCCGCTACGACGCACACTAAGCAAAATCAGTGGCTGTAATTGTGATGTATGGTTTCGATTGGTTTAGGCTAATTGGTTTTGAACGAATTATTTCTTAACAATAGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTATTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTCCCGCACAAAACGAAACAAACGAACGTGGACCCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTCACCACGTGCAATCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX617822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACAAAACGAAACAAACGAACGCGGGCCCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTCACCA  TGCAAAAGACATAGCGTGAGCATGGTGCCCAGTTTTGTACAGCCATTTCCTGTTTGTTACTGTAATTAGCGAAACACATTCTAGTCAGCAAGGGAATCCCGATTATGTTGCCATTCGAGCTGTCCCGCAAGTCGCGACGGATCCGTAGCCAAGCGCCAAAACATGTCTTAAACGTAAACCAAAGTAATGTAGCACGATTTACCAGGCTAAACTATATAGGAAGCTAAAGGGCACGGCAACACACCTCCCTACAAAACCGTTCACGACGTAGAGAGCAACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGTAAGACTTTTAGGAGCAACCTAGGAACAATAGCTACCACATAAGCATACGTACACGTAGGTAAGCGGGGGCAGTATTCATTTGTACTATTAGAATTGTATGCGCGATTTTACTACCATTCATGACAAGCGAGGACAGTGCAAGAAAGGGAAGCTAAATGGTACATAAAAAGTATAAATCACCAACGCATAACGATTAGTAATCCTGTTCCAATGGTTGGAGCAACCGAGAACTAACACAATGTATGATAGCATTGGGCTGGTGTAAACGGATGTGCATTATGTGTAGACACCAGAGC                                              ]
[-] EMBL AGA281114            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTACTATTAGAATTGTATGCGCGATTTTACTACCATTCATGACAAGCGAGGACAGTGCAAGAAAGGGAAGCTAAATGGTACATAAAAAGTATAAATCACCAACGCATAACGATTAGTAATCCTGTTCCAATGGTTGGAGCAACCGAGAACTAACACAATGTATGATAGCATTGGGCTGGTGTAAACGGATGTGCATTATGTGTAGACACCAGAGCAGAACGAAAAAGAAATAAACAATATTTAGAGGTGTTCAAAAAAAA ]
[+] EMBL AGA282742            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAATTGTATGCGCGATTTTACTACCATTCATGACAAGCGAGGACAGTGCAAGAAAGGGAAGCTAAATGGTACATAAAAAGTATAAATCACCAACGCATAACGATTAGTAATCCTGTTCCAATGGTTGGAGCAACCGAGAACTAACACAATGTATGATAGCATTGGGCTGGTGTAAACGGATGTGCATTATGTGTAGACACCAGAGCAGAACGAAAAAGAAATAAACAATATTTAGAGGTGTTCAAAAAAAAA]




>consensus_8240#0
CTGGTGCACGTAGATTTGCTCGCCTGATCGTTATCGTAGGACCAAGGTCGATATTGGACT
CAATTTGTAAAAAAATAAACTTTGGGCATGGGAATAAACGAATCTCTCGTGGGCGAAAAA
CTTCACTGGCGAAGTTAAGCTAGTCTTCTACGATGATCTAGTCGAGAACGTGGAGGGTAC
ATTGCGCAGTATTCTTAAATTTCTCAACTACCAGACGGACGAGGAGCTGCTGGCGTGTGC
CCTCATGCGAAAGGAAGGCATTTACCGGCGCAAGAAGCGCATTCTGCAGTTCGATCCGTA
CAGTCCGGCAATGCACGCAGCAATTGACGAAAAGCGTGCCGAAGTGTACGCAGCCCTCGG
CCGCTACGACGCACACTAAGCAAAATCAGTGGCTGTAATTGTGATGTATGGTTTCGATTG
GTTTAGGCTAATTGGTTTTGAACGAATTATTTCTTAACAATAGAACCCAGTCGTACCACT
ACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTA
TTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACTA
GGCAACCAGAATCTCAAACACAGTTTCCCGCACAAAACGAAACAAACGAACGTGGACCCG
ATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTCACCACGTGCAATCGCGATA
GCGTGAGCATGGTGCCCAGTTTTGTACAGCCATTTCCTGTTTGTTACTGTAATTAGCGAA
ACACATTCTAGTCAGCAAGGGAATCCCGATTATGTTGCCATTCGAGCTGTCCCGCAAGTC
GCGACGGATCCGTAGCCAAGCGCCAAAACATGTCTTAAACGTAAACCAAAGTAATGTAGC
ACGATTTACCAGGCTAAACTATATAGGAAGCTAAAGGGCACGGCAACACACCTCCCTACA
AAACCGTTCACGACGTAGAGAGCAACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGT
AAGACTTTTAGGAGCAACCTAGGAACAATAGCTACCACATAAGCATACGTACACGTAGGT
AAGCGGGGGCAGTATTCATTTGTACTATTAGAATTGTATGCGCGATTTTACTACCATTCA
TGACAAGCGAGGACAGTGCAAGAAAGGGAAGCTAAATGGTACATAAAAAGTATAAATCAC
CAACGCATAACGATTAGTAATCCTGTTCCAATGGTTGGAGCAACCGAGAACTAACACAAT
GTATGATAGCATTGGGCTGGTGTAAACGGATGTGCATTATGTGTAGACACCAGAGCAGAA
CGAAAAAGAAATAAACAATATTTAGAGGTGTTCAAAAAAAAA

consensusID : consensus_8240#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 719
fasta sequence

                              [GCAGAATCCGCACGAGGCGAATTATTTCTTAACAATTGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACAAGGCAACCAGAATCTCAAACACAGTTTTCCCGGCGACAAAAACGAAACAAACGGAACGCGGGGCCCCGATTTTTACANAAGCTTTCCCATTTATTTGGTGGTAAACGGGTTAGAGATTTCACCCATTGCAAAAAAGACAATAAGGCGGTTGGAGGCAATGGTGCCCCAGGTTTTTTGTTACAAGCCATTTTCCCTGGTTTAGTTTACCTTGTAAATTTAGGCGGAAAACAACAATTTCTAAGTCAGCAAGGGGAATCCCCGATTTATGTTGCCATTCGAGGCTGTCCCGGCAAAGTTCGCCGACCGGATCCCGTTAGACCCAAGGCGCCCAGAAACGATGTCTTTAACACGTTAAACCAANAGTAATGTAGCACGATTTACCAGGCTAAACTATATAGGANAGCTAAAGGGCACGGGAACACACCTCCCTACAAAACCGTTCACGACGTAAGAGCAACANCACACGTTGTAGAAGGAAGCTAGAAGAAACTGGTGAAGACTTTTAGGAGCAACCTAGGAACGATAGCTACCACATAAGCATACGT]

[+] EMBL BX468795             [GCAGAATCCGCACGAGGCGAATTATTTCTTAACAATTGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACAAGGCAACCAGAATCTCAAACACAGTTTTCCCGGCGACAAAAACGAAACAAACGGAACGCGGGGCCCCGATTTTTACANAAGCTTTCCCATTTATTTGGTGGTAAACGGGTTAGAGATTTCACCCATTGCAAAAAAGACAATAAGGCGGTTGGAGGCAATGGTGCCCCAGGTTTTTTGTTACAAGCCATTTTCCCTGGTTTAGTTTACCTTGTAAATTTAGGCGGAAAACAACAATTTCTAAGTCAGCAAGGGGAATCCCCGATTTATGTTGCCATTCGAGGCTGTCCCGGCAAAGTTCGCCGACCGGATCCCGTTAGACCCAAGGCGCCCAGAAACGATGTCTTTAACACGTTAAACCAANAGTAATGTAGCACGATTTACCAGGCTAAACTATATAGGANAGCTAAAGGGCACGGGAACACACCTCCCTACAAAACCGTTCACGACGTAAGAGCAACANCACACGTTGTAGAAGGAAGCTAGAAGAAACTGGTGAAGACTTTTAGGAGCAACCTAGGAACGATAGCTACCACATAAGCATACGT]




>consensus_8240#1
GCAGAATCCGCACGAGGCGAATTATTTCTTAACAATTGAACCCAGTCGTACCACTACTAC
TCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGT
ACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACAAGGCAA
CCAGAATCTCAAACACAGTTTTCCCGGCGACAAAAACGAAACAAACGGAACGCGGGGCCC
CGATTTTTACANAAGCTTTCCCATTTATTTGGTGGTAAACGGGTTAGAGATTTCACCCAT
TGCAAAAAAGACAATAAGGCGGTTGGAGGCAATGGTGCCCCAGGTTTTTTGTTACAAGCC
ATTTTCCCTGGTTTAGTTTACCTTGTAAATTTAGGCGGAAAACAACAATTTCTAAGTCAG
CAAGGGGAATCCCCGATTTATGTTGCCATTCGAGGCTGTCCCGGCAAAGTTCGCCGACCG
GATCCCGTTAGACCCAAGGCGCCCAGAAACGATGTCTTTAACACGTTAAACCAANAGTAA
TGTAGCACGATTTACCAGGCTAAACTATATAGGANAGCTAAAGGGCACGGGAACACACCT
CCCTACAAAACCGTTCACGACGTAAGAGCAACANCACACGTTGTAGAAGGAAGCTAGAAG
AAACTGGTGAAGACTTTTAGGAGCAACCTAGGAACGATAGCTACCACATAAGCATACGT

consensusID : consensus_8240#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence

                              [CGGCCNAGGTCAAAACGAAACAAACGAACGCGGACCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTTACCACGTGCAATCGCGCCCAGTGCAAAAGACATAGCGTGAGCATGGTGCCCAGTTTTGTACAGCCATTTCTTGTTGTTACTGTAATTAGCGAAACACATTCTAGTCAGCAAGGGAATCCCGATTATGTTGCCATCCGAGCTGTCCCGCAAGTCGCGACGGATCCGTAGCCAAGCGCCAAAACATGTCTTAAACGTAAACCAAAGTAATGTAGCACGATTTACCAGGCTAAACTATATAGGAAGCAAAAGGGCACGGCAACACACCTCCCTACAAAACCGTTCACGACGTAGAGAGCAACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGTAAGACTTTTAGGAGCAACCTAGGAACAATAGCTACCACATAAGCATACGTACACGTANGTAAGCGGGGGCAAGTATTCATTTGTACTCATTACGAAANATGTCTGGCGCGATTTTACTACCCATTCCATGCACCAGCGANGGACAGGTGCAANCAAGGGGAAAACTAAATTGGTAATNANAAACGTATCAACTCACCCACGCATAACGATAGTAATCCTGTTCCAATGGTTTGGACCACCGAGAACTACCCAAGTTGATAGCCTG]

[+] EMBL AL934546             [CGGCCNAGGTCAAAACGAAACAAACGAACGCGGACCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTTACCACGTGCAATCGCGCCCAGTGCAAAAGACATAGCGTGAGCATGGTGCCCAGTTTTGTACAGCCATTTCTTGTTGTTACTGTAATTAGCGAAACACATTCTAGTCAGCAAGGGAATCCCGATTATGTTGCCATCCGAGCTGTCCCGCAAGTCGCGACGGATCCGTAGCCAAGCGCCAAAACATGTCTTAAACGTAAACCAAAGTAATGTAGCACGATTTACCAGGCTAAACTATATAGGAAGCAAAAGGGCACGGCAACACACCTCCCTACAAAACCGTTCACGACGTAGAGAGCAACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGTAAGACTTTTAGGAGCAACCTAGGAACAATAGCTACCACATAAGCATACGTACACGTANGTAAGCGGGGGCAAGTATTCATTTGTACTCATTACGAAANATGTCTGGCGCGATTTTACTACCCATTCCATGCACCAGCGANGGACAGGTGCAANCAAGGGGAAAACTAAATTGGTAATNANAAACGTATCAACTCACCCACGCATAACGATAGTAATCCTGTTCCAATGGTTTGGACCACCGAGAACTACCCAAGTTGATAGCCTG]




>consensus_8240#2
CGGCCNAGGTCAAAACGAAACAAACGAACGCGGACCGATTTTAAAAGCTTCCATTATTTG
TGTAACGGTTAGAGATTTACCACGTGCAATCGCGCCCAGTGCAAAAGACATAGCGTGAGC
ATGGTGCCCAGTTTTGTACAGCCATTTCTTGTTGTTACTGTAATTAGCGAAACACATTCT
AGTCAGCAAGGGAATCCCGATTATGTTGCCATCCGAGCTGTCCCGCAAGTCGCGACGGAT
CCGTAGCCAAGCGCCAAAACATGTCTTAAACGTAAACCAAAGTAATGTAGCACGATTTAC
CAGGCTAAACTATATAGGAAGCAAAAGGGCACGGCAACACACCTCCCTACAAAACCGTTC
ACGACGTAGAGAGCAACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGTAAGACTTTT
AGGAGCAACCTAGGAACAATAGCTACCACATAAGCATACGTACACGTANGTAAGCGGGGG
CAAGTATTCATTTGTACTCATTACGAAANATGTCTGGCGCGATTTTACTACCCATTCCAT
GCACCAGCGANGGACAGGTGCAANCAAGGGGAAAACTAAATTGGTAATNANAAACGTATC
AACTCACCCACGCATAACGATAGTAATCCTGTTCCAATGGTTTGGACCACCGAGAACTAC
CCAAGTTGATAGCCTG

consensusID : consensus_8240#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 591
fasta sequence

                              [GATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAGTATTCTTAAATTTCTCAACTACCAGACGGACGAAGAGCTGCTGGCGTGTGCCCTCATGCGAAAGGAAGGCATTTACCGGCGCAAGAAGCGCATTCTGCAGTTCGATCCGTACAGTCCGGCAATGCACGCAGCAATTGACGAAAAGCGTGCCGAAGTGTACGCAGCCCTCGGACGCTACGACGCACACTAAGCAAAATCAGTGGCTGTAATTGTGATGTATGGTTTCGATTGGTTTAAGCTAATTGGTTTTGAACGAATTATTTCTTAACAATTGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTCCCGCACAAAACGAAACAAACGAACGCGGACCCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTTACCACGTGCAATCGCGCCCAGTGCAAAGACATAGCGTGAGC]

[+] EMBL BX627141             [GATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAGTATTCTTAAATTTCTCAACTACCAGACGGACGAAGAGCTGCTGGCGTGTGCCCTCATGCGAAAGGAAGGCATTTACCGGCGCAAGAAGCGCATTCTGCAGTTCGATCCGTACAGTCCGGCAATGCACGCAGCAATTGACGAAAAGCGTGCCGAAGTGTACGCAGCCCTCGGACGCTACGACGCACACTAAGCAAAATCAGTGGCTGTAATTGTGATGTATGGTTTCGATTGGTTTAAGCTAATTGGTTTTGAACGAATTATTTCTTAACAATTGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTCCCGCACAAAACGAAACAAACGAACGCGGACCCGATTTTAAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTTACCACGTGCAATCGCGCCCAGTGCAAAGACATAGCGTGAGC]




>consensus_8240#3
GATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAGTATTCTTAAATTTCTCAACTAC
CAGACGGACGAAGAGCTGCTGGCGTGTGCCCTCATGCGAAAGGAAGGCATTTACCGGCGC
AAGAAGCGCATTCTGCAGTTCGATCCGTACAGTCCGGCAATGCACGCAGCAATTGACGAA
AAGCGTGCCGAAGTGTACGCAGCCCTCGGACGCTACGACGCACACTAAGCAAAATCAGTG
GCTGTAATTGTGATGTATGGTTTCGATTGGTTTAAGCTAATTGGTTTTGAACGAATTATT
TCTTAACAATTGAACCCAGTCGTACCACTACTACTCTTGTTACCGAGACGCCAGACAGAG
GCAGCGCCTATATTTTTGCTCACAAAGTATTTGTACAAAGCTTAAGTAGTGTTGTTAAAG
AAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTCCCGC
ACAAAACGAAACAAACGAACGCGGACCCGATTTTAAAAGCTTCCATTATTTGTGTAACGG
TTAGAGATTTACCACGTGCAATCGCGCCCAGTGCAAAGACATAGCGTGAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8240#0      ------------------------------------------------CTGGTGCACGTA 12
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      GCAGAATCCGCACGAGGCGAATTATTTCTTAACAATTGAACCCAGTCGTACCACTACTAC 60
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      GATTTGCTCGCCTGATCGTTATCGTAGGACCAAGGTCGATATTGGACTCAATTTGTAAAA 72
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      TCTTGTTACCGAGACGCCAGACAGAGGCAGCGCCTATATTTTTGCTCACAAAGTATTTGT 120
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      AAATAAACTTTGGGCATGGGAATAAACGAATCTCTCGTGGGCGAAAAACTTCACTGGCGA 132
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ACAAAGCTTAAGTAGTGTTGTTAAAGAAATGTTTTTCATAAGTATCGAACCACAAGGCAA 180
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      AGTTAAGCTAGTCTTCTACGATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAG--- 189
consensus_8240#3      -------------------GATGATCTAGTCGAGAACGTGGAGGGTACATTGCGCAG--- 38
consensus_8240#1      CCAGAATCTCAAACACAGTTTTCCCGGCGACAAAAACGAAACAAACGGAACGCGGGGCCC 240
consensus_8240#2      ---------------------CGGCCNAGGTCAAAACGAAACAAACG-AACGCGGA---C 35
                                                  *   * ****          *  ***      

consensus_8240#0      -TATTCTT----AAATTTCT--CAACTACCAGACGGACGAGGAGCTGCTGGCGTGTGCCC 242
consensus_8240#3      -TATTCTT----AAATTTCT--CAACTACCAGACGGACGAAGAGCTGCTGGCGTGTGCCC 91
consensus_8240#1      CGATTTTTACANAAGCTTTC-CCATTTATTTGGTGGTAAACGGGTTAGAGATTTCACCCA 299
consensus_8240#2      CGATTTT---AAAAGCTTCCATTATTTGTGTAACGGTTAGAGATTTACCACGTGCA---A 89
                        *** *     **  **     *  *       **     *   *              

consensus_8240#0      TCATGCGAAAGG----AAGGCATTTACCGGCGCAAGAAGCGC---ATTCTGCAGTTCGAT 295
consensus_8240#3      TCATGCGAAAGG----AAGGCATTTACCGGCGCAAGAAGCGC---ATTCTGCAGTTCGAT 144
consensus_8240#1      TTGCAAAAAAGACAATAAGGCGGTTGGAGG-CAATGGTGCCCCAGGTTTTTTGTTACAAG 358
consensus_8240#2      TCGCGCCCAGTGCAA-AAGACATAGCGTGA-GCATGGTGCCC--AGTTTTGTAC----AG 141
                      *       *       *** *       *    * *  ** *    ** *        * 

consensus_8240#0      CCGTACAGTCCGGCA--ATGCACGCAGCAA---TTGACGAAAAGCGTGCCGAAGTGTACG 350
consensus_8240#3      CCGTACAGTCCGGCA--ATGCACGCAGCAA---TTGACGAAAAGCGTGCCGAAGTGTACG 199
consensus_8240#1      CCATTTTCCCTGGTTTAGTTTACCTTGTAAATTTAGGCGGAAAACAA--CAATTTCTAAG 416
consensus_8240#2      CCATTTCTTGTTGTT--------ACTGTAA---TTAGCGAAACACA-------TTCTA-G 182
                      ** *        *             * **   *   ** **  *         * ** *

consensus_8240#0      -CAGCCCTCGGCCGCTACGACGCACACTA--AGCAAAATCAGTGGCTGTAATTGTGATGT 407
consensus_8240#3      -CAGCCCTCGGACGCTACGACGCACACTA--AGCAAAATCAGTGGCTGTAATTGTGATGT 256
consensus_8240#1      TCAGCAAGGGGAATCCCCGATTTATGTTGCCATTCGAGGCTGTCCCGGCAAAGTTCGCCG 476
consensus_8240#2      TCAGCAAGGGAA--TCCCGATT-ATGTTGCCATCCGAG-CTGTCCCG-CAAG--TCGCGA 235
                       ****    *       ***   *   *   *    *  * **  *   **   *     

consensus_8240#0      A-TGGTTTCGATTGG--TTTAGGCT-------AATTGGTTTTGAACGAATTATTTCTTAA 457
consensus_8240#3      A-TGGTTTCGATTGG--TTTAAGCT-------AATTGGTTTTGAACGAATTATTTCTTAA 306
consensus_8240#1      ACCGGATCCCGTTAGACCCAAGGCGCCCAGAAACGATGTCTTTAACACGTTAAACCAANA 536
consensus_8240#2      --CGGATCCG--TAG---CCAAGCGCC---AAAACATGTCTTAAACG---TAAACCAAA- 281
                         ** * *   * *     * **        *    ** ** ***    **   *    

consensus_8240#0      CAATAGAACCCAGTCGTACCA--CTA--CTACTCTTGTTACCGAGACGCCAGACAGAGGC 513
consensus_8240#3      CAATTGAACCCAGTCGTACCA--CTA--CTACTCTTGTTACCGAGACGCCAGACAGAGGC 362
consensus_8240#1      GTAATGTAGCACGATTTACCAGGCTAAACTATATAGGANAGCTAAAGGGCACGGGAACAC 596
consensus_8240#2      GTAATGTAGCACGATTTACCAGGCTAAACTATATAGGAA-GCAAAAGGGCACGGCAACAC 340
                        *  * * *  *   *****  ***  ***     *    * * * * **     *  *

consensus_8240#0      AGCGCC-TATATTTTTGCTCACAAAGTA----TTTGTAC-AAAGCTTAAGTAGTGTTGTT 567
consensus_8240#3      AGCGCC-TATATTTTTGCTCACAAAGTA----TTTGTAC-AAAGCTTAAGTAGTGTTGTT 416
consensus_8240#1      ACCTCCCTACAAAACCGTTCACGACGTA-AGAGCAACANCACACGTTGTAGAAGGAAGCT 655
consensus_8240#2      ACCTCCCTACAAAACCGTTCACGACGTAGAGAGCAACAC-ACACGTTGTAGAAG-AAGCT 398
                      * * ** ** *     * **** * ***         *  * *  **    *     * *

consensus_8240#0      AAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTC 627
consensus_8240#3      AAAGAAATGTTTTTCATAAGTATCGAACCACTAGGCAACCAGAATCTCAAACACAGTTTC 476
consensus_8240#1      AGAAGAAACTGGTGAAGACTTTTAGGAGCAACCTAGGAACGATAGCTACCACATAAGCAT 715
consensus_8240#2      AGAAGAAACTGGT-AAGACTTTTAGGAGCAACCTAGGAACAATAGCTACCACATAAGCAT 457
                      * *  **  *  *  * *  * * * * **       * *   * **   *** *     

consensus_8240#0      CCGCACAAAACGAAACAAACGAACGTGGACCCGATTTTAAAAGCTTCCAT-TATTTGTGT 686
consensus_8240#3      CCGCACAAAACGAAACAAACGAACGCGGACCCGATTTTAAAAGCTTCCAT-TATTTGTGT 535
consensus_8240#1      ACGT-------------------------------------------------------- 719
consensus_8240#2      ACGTACACGTANGTAAGCGGGGGCAAGTATTCATTTGTACTCATTACGAAANATGTCTGG 517
                       **                                                         

consensus_8240#0      AACGGTTAGAG-ATTCACCACGTGCAATCGCGAT-AGCGTGAGCATGGTGCCCAGTTTTG 744
consensus_8240#3      AACGGTTAGAG-ATTTACCACGTGCAATCGCGCCCAGTGCAAAGACATAGCGTGAGC--- 591
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      CGCGATTTTACTACCCATTCCATGCACCAGCGANGGACAGGTGCAANCAAGGGGAAAACT 577
                                                                                  

consensus_8240#0      TACAGCCATTTCCTGTTTGTTACTGTAATTAGCGAAACACATTCTAGTCAGCAAGGGAAT 804
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      AAATTGGTAATNANAAACGTATCAACTCACCCACGCATAACGATAGTAATCCTGTTCCAA 637
                                                                                  

consensus_8240#0      CCCGATTATGTTGCCATTCGAGCTGTCCCGCAAGTCGCGACGGATCCGTAGCCAAGCGCC 864
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      TGGTTTGGACCACCGAGAACTACCCAAGTTGATAGCCTG--------------------- 676
                                                                                  

consensus_8240#0      AAAACATGTCTTAAACGTAAACCAAAGTAATGTAGCACGATTTACCAGGCTAAACTATAT 924
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      AGGAAGCTAAAGGGCACGGCAACACACCTCCCTACAAAACCGTTCACGACGTAGAGAGCA 984
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      ACACACACGTTGTAGAAGAAGCTAGAAGAAACTGGTAAGACTTTTAGGAGCAACCTAGGA 1044
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      ACAATAGCTACCACATAAGCATACGTACACGTAGGTAAGCGGGGGCAGTATTCATTTGTA 1104
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      CTATTAGAATTGTATGCGCGATTTTACTACCATTCATGACAAGCGAGGACAGTGCAAGAA 1164
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      AGGGAAGCTAAATGGTACATAAAAAGTATAAATCACCAACGCATAACGATTAGTAATCCT 1224
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      GTTCCAATGGTTGGAGCAACCGAGAACTAACACAATGTATGATAGCATTGGGCTGGTGTA 1284
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      AACGGATGTGCATTATGTGTAGACACCAGAGCAGAACGAAAAAGAAATAAACAATATTTA 1344
consensus_8240#3      ------------------------------------------------------------
consensus_8240#1      ------------------------------------------------------------
consensus_8240#2      ------------------------------------------------------------
                                                                                  

consensus_8240#0      GAGGTGTTCAAAAAAAAA 1362
consensus_8240#3      ------------------
consensus_8240#1      ------------------
consensus_8240#2      ------------------