cluster # 8259

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Anopheles gambiae
cluster # 8259 cluster # 8259 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8259#0 length = 1164 sequences # 6

consensus_8259#1 length = 962 sequences # 2
consensus_8259#2 length = 698 sequences # 1

consensusID : consensus_8259#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1164
fasta sequence

                              [CCGCGATCTCGACGCGCACACACAGTCCAGTGGTGACGGCAAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGCTTGCGCACGCCCTGGAGAAGGAACCGTCGAAGCGCAAGGGCGAACGACTGGCAAGTGTGTGAGAGAGTGAGAGAGCGAAAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCG-TGCAAGCGGAAGAGCAGAGAGGAGCAGGCGGGTTGCGGTCCCATTAGCG-AAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAGCAGCAACACAGCAAGCGCACACGGACACAGAAACACGG-ATGTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGT-CCGGTCCGTCCGTCCCGACACAGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGTGTGTGGCCCGGCCGCACACGGAGACAGCACTCACACACATCTCAGCAGACGGCCCAAACACAGAGTGTGACGACACCAGAGGAGGAGGTGTGGAATCGTAGTAGTGTGAGTACACCGTCACCACCCACTACCACCACTTGATCGACAACAGGCGACAGCATGAACGAAATCGAAGCGCTGCGCCAGGAGGCGGAAACGCTCAAAAATGCGATCCGGGACGCGCGGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACAGCTGGCAAGCCGTCGGTCGCATCCAGCTCCGGACGCGCCGCACGCTCCGGGGCCATCTGGCGAAGATCTACGCGATGCACTGGGGCAACGATTCGCGCTACCTGGTGTC]

[+] EMBL BM605136             [CCGCGATCTCGACGCGCACACACAGTCCAGTGGTGACGGCAAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGCTTGCGCACGCCCTGGAGAAGGAACCGTCGAAGCGCAAGGGCGAACGACTGGCAAGTGTGTGAGAGAGTGAGAGAGCGAAAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCG TGCAAGCGGAAGAGCAGAGAGGAGCAGGCGGGTTGCGGTCCCATTAGCG AAAAAAAAGGTGGACCATCGTCGCCGTCGGCAAGTAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM641824             [                                  ccgGGCAAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGCTTGCGCACGCCCTGGAGAAGGAACCGTCGAAGCGCAAGGGCGAACGACTGGCAAGTGTGTGAGAGAGTGAGAGAGCGAAAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCG T                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM588398             [                                          ccgGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGCTTGCGCACGCCCTGGAGAAGGAACCGTCGAAGCGCAAGGGCGAACGACTGGCAAGTGTGTGAGAGAGTGAGAGAGCGAAAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCG TGCAAGCGGAAGAGCAGAGAGGAGCAGGCGGGTTGCGGTCCCATTAGCG AAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAGCAGCAACACAGCAAGCGCACACGGACACAGAAACACCG ATGTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGTCCCGGTCCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AGA280365            [                                                                                                                                CTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTCACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGCTTGCGCACGCCCTGGAGAAGGAACCGTCGAAGCGCAAGGGCGAACGACTGGCAAGTGTGTGAGAGAGTGAGAGAGCGAAAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGCAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM613489             [                                                                                                                                                                                                                                                                                                                                                                                                      GCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCG TGCAAGCGGAAGAGCAGAGAGGAGCAGGCGGGTTGCGGTCCCATTAGCG AAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAGCAGCAACACAGCAAGCGCACACGGACACAGAAACACGG  TGTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGT CCGGTCCGTCCGTCCCGACACAGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGT                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM594322             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgCACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCGTTGCAAGCGGAAGAGCAGAGAGGAGCGAGCGGGTTGCGGTCCCATTAGCGAAAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAGCAGCACCACAGCAAGCGCACACGGACACAGAAACACGGTTTGTGTGTGTGCGCGCGCGCTCGGTGTCGTCATCGGTCCGT CCGGTCCGTCCGTCCCGACACAGTCGGTCAGCCGAAAGGGAGAGAAAAAAGAGTGTGTGGCCCGGCCGCACACGGAGACAGCACTCACACACATCTCAGCAGACGGCCCAAACACAGAGTGTGACGACACCAGAGGAGGAGGTGTGGAATCGTAGTAGTGTGAGTACACCGTCACCACCCACTACCACCACTTGATCGACAACAGGCGACAGCATGAACGAAATCGAAGCGCTGCGCCAGGAGGCGGAAACGCTCAAAAATGCGATCCGGGACGCGCGGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACAGCTGGCAAGCCGTCGGTCGCATCCAGCTCCGGACGCGCCGCACGCTCCGGGGCCATCTGGCGAAGATCTACGCGATGCACTGGGGCAACGATTCGCGCTACCTGGTGTC]




>consensus_8259#0
CCGCGATCTCGACGCGCACACACAGTCCAGTGGTGACGGCAAAGTGGCTTCAGGAAAAGT
TCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGT
GTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTG
TCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGCTTGCGCACGCCCTGGAGA
AGGAACCGTCGAAGCGCAAGGGCGAACGACTGGCAAGTGTGTGAGAGAGTGAGAGAGCGA
AAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAAACTTCCTCCTCTCTACAC
TCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGT
GCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACT
GTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTA
GCGTTATCATTGTCCGTCGTGCAAGCGGAAGAGCAGAGAGGAGCAGGCGGGTTGCGGTCC
CATTAGCGAAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAGCAGCA
ACACAGCAAGCGCACACGGACACAGAAACACGGATGTGTGTGTGTGCGCGCGCTCGGTGT
CGTCATCGGTCCGTCCGGTCCGTCCGTCCCGACACAGTCGGTCAGCCGAAAGGGAGAGAA
AAAAGTGTGTGTGGCCCGGCCGCACACGGAGACAGCACTCACACACATCTCAGCAGACGG
CCCAAACACAGAGTGTGACGACACCAGAGGAGGAGGTGTGGAATCGTAGTAGTGTGAGTA
CACCGTCACCACCCACTACCACCACTTGATCGACAACAGGCGACAGCATGAACGAAATCG
AAGCGCTGCGCCAGGAGGCGGAAACGCTCAAAAATGCGATCCGGGACGCGCGGGAAGGCG
GTGTGCGACACGTCCATCCTGCAGGCGACGGCACAGCTGGCAAGCCGTCGGTCGCATCCA
GCTCCGGACGCGCCGCACGCTCCGGGGCCATCTGGCGAAGATCTACGCGATGCACTGGGG
CAACGATTCGCGCTACCTGGTGTC

consensusID : consensus_8259#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 962
fasta sequence

                              [CCGCAAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACGCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAAACACAGTCGCTTGCGCACGCCCTGGAGGAGGAACCGTCGAAGCGCAAGGGCGAACGACTAGCAAAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCGTTGCAAGCGGAAGAGCAGAGAGGAGCGAGCGGGTTGCGGTCCCATTAGCGAAAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAAGCAGCACCACAGCAAGCGCACACGGACACAGAAAACACCGGTTTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGTCCGGTCCGTCCGTCCCGACACAGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGTGTGGCCCGGCCGCACACGGAGACAGCACTCACACACATCTCAGCAGAGTGTGACGACACGAGAGGAGGAGGTGTAGAACCGTAGTAGTGTGAGTACACCGTCACCACCCACTACCACCACCTGATCGACAACAGGCGACAGCATGAACGAAATCGAAGCGCTGCGTCAGGAGGCGGAAACGCTCAAAAATGCGATCCGCGACGCGAGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACAGCTGGAAGCCGTCGGTC]

[+] EMBL BM609992             [CCGCAAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACGCAAGGCTTGTGTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGCTGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAAACACAGTCGCTTGCGCACGCCCTGGAGGAGGAACCGTCGAAGCGCAAGGGCGAACGACTAGCAAAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCCGTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCGTTGCAAGCGGAAGAGCAGAGAGGAGCGAGCGGGTTGCGGTCCCATTAGCGAAAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGGAAAAGCAGCACCACAGCAAGCGCACACGGACACAGAAAACACCGGTTTGTGTGTGTGCGCGC                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM614036             [                                                                                                                                                                                                                                                                                                                                                                                                               ccgGCCCGTTGGAAGTGTGTAAGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCG TGCAAGCGGAAGAGCAGAGAGGAGCAGGCGGGTTGCGGTCCCATTAGCG AAAAAAAAGGTGGACAATCGTCGCCGTCGGCAAGTAGCAGCGG AAAGCAGCAACACAGCAAGCGCACACGGACACAG AAACA CGGTGTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGTCCGGTCCGTCCGTCCCGACACAGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGTGTGGCCCGGCCGCACACGGAGACAGCACTCACACACATCTCAGCAGAGTGTGACGACACGAGAGGAGGAGGTGTAGAACCGTAGTAGTGTGAGTACACCGTCACCACCCACTACCACCACCTGATCGACAACAGGCGACAGCATGAACGAAATCGAAGCGCTGCGTCAGGAGGCGGAAACGCTCAAAAATGCGATCCGCGACGCGAGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACAGCTGGAAGCCGTCGGTC]




>consensus_8259#1
CCGCAAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACGCAAGGCTTGT
GTTTGTGTGTGCGCGCATGTGTGTGTGATTGTCTTGTTTTTCCGTGCGTGCGTGCTGTGC
TGTGCTGTGTTGTGTTTACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAAACA
CAGTCGCTTGCGCACGCCCTGGAGGAGGAACCGTCGAAGCGCAAGGGCGAACGACTAGCA
AAGAAAACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCC
AAAACGGTGTTTGATAAGGGTGGTGCGCTGGAAGTGCGCTCATCTACCCCAGAGAATCCC
GTACACCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTA
AGTCATCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCGTTGCAAGCGGAAGAGCA
GAGAGGAGCGAGCGGGTTGCGGTCCCATTAGCGAAAAAAAAAGGTGGACAATCGTCGCCG
TCGGCAAGTAGCAGCGGAAAAGCAGCACCACAGCAAGCGCACACGGACACAGAAAACACC
GGTTTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGTCCGGTCCGTCCGTCCCGA
CACAGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGTGTGGCCCGGCCGCACACGGAGACA
GCACTCACACACATCTCAGCAGAGTGTGACGACACGAGAGGAGGAGGTGTAGAACCGTAG
TAGTGTGAGTACACCGTCACCACCCACTACCACCACCTGATCGACAACAGGCGACAGCAT
GAACGAAATCGAAGCGCTGCGTCAGGAGGCGGAAACGCTCAAAAATGCGATCCGCGACGC
GAGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACAGCTGGAAGCCGTCGG
TC

consensusID : consensus_8259#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [GCAGAATCCCCGACGGTTANTCACACACAGTCCAGTGGTGACGGCAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTATGTGTGTGCGCGCATGTGTGTGTGATATGTCTTGTTTTATACCGATGCGTGCGTGCTGTGCTGTGCTGTGTATGTGTTATACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGGCTNTGCGCACNGCCCTGGAGAAAGGAACCGTACGACAGGCNGGCANNAAGGGGCCGAAACAGATCTTGGGCGCACACGCTCGTTGTTGACGCACGAACGTTTGACGGACGAAGGCCGNAACAGGACCCCGGATCGAAGACCGAAGACGTGCGGAAGCGNGGACGAACCGGGACAAAGGAACCCAGGATTACAACGCTTTCACTACCCTTCCTTCAGTNAAACAACAACCAATCCCTAAAACAAGCCAAGTGAGGACCAATAGTANAATATCCAAAGTACAAGGGGGNTTGGGAGTGACCATNCCGGGTGCGATTTNCCCTACGGTCGAGAAAACNAGGGCGATGGNCGATATCACCGGGCACCTCTACCACGCGCCGCACTATGGACGCATGGCCCTACCCCCTCCGCGACACACNAGCCCANGCCCACGCACCCNACCAAACATTACATAANAGCACCCCACGC]

[+] EMBL AL694783             [GCAGAATCCCCGACGGTTANTCACACACAGTCCAGTGGTGACGGCAAGTGGCTTCAGGAAAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTATGTGTGTGCGCGCATGTGTGTGTGATATGTCTTGTTTTATACCGATGCGTGCGTGCTGTGCTGTGCTGTGTATGTGTTATACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGGCTNTGCGCACNGCCCTGGAGAAAGGAACCGTACGACAGGCNGGCANNAAGGGGCCGAAACAGATCTTGGGCGCACACGCTCGTTGTTGACGCACGAACGTTTGACGGACGAAGGCCGNAACAGGACCCCGGATCGAAGACCGAAGACGTGCGGAAGCGNGGACGAACCGGGACAAAGGAACCCAGGATTACAACGCTTTCACTACCCTTCCTTCAGTNAAACAACAACCAATCCCTAAAACAAGCCAAGTGAGGACCAATAGTANAATATCCAAAGTACAAGGGGGNTTGGGAGTGACCATNCCGGGTGCGATTTNCCCTACGGTCGAGAAAACNAGGGCGATGGNCGATATCACCGGGCACCTCTACCACGCGCCGCACTATGGACGCATGGCCCTACCCCCTCCGCGACACACNAGCCCANGCCCACGCACCCNACCAAACATTACATAANAGCACCCCACGC]




>consensus_8259#2
GCAGAATCCCCGACGGTTANTCACACACAGTCCAGTGGTGACGGCAAGTGGCTTCAGGAA
AAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTATGTGTGTGCGCGCATG
TGTGTGTGATATGTCTTGTTTTATACCGATGCGTGCGTGCTGTGCTGTGCTGTGTATGTG
TTATACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAACAAAGTCGGCTNTGCG
CACNGCCCTGGAGAAAGGAACCGTACGACAGGCNGGCANNAAGGGGCCGAAACAGATCTT
GGGCGCACACGCTCGTTGTTGACGCACGAACGTTTGACGGACGAAGGCCGNAACAGGACC
CCGGATCGAAGACCGAAGACGTGCGGAAGCGNGGACGAACCGGGACAAAGGAACCCAGGA
TTACAACGCTTTCACTACCCTTCCTTCAGTNAAACAACAACCAATCCCTAAAACAAGCCA
AGTGAGGACCAATAGTANAATATCCAAAGTACAAGGGGGNTTGGGAGTGACCATNCCGGG
TGCGATTTNCCCTACGGTCGAGAAAACNAGGGCGATGGNCGATATCACCGGGCACCTCTA
CCACGCGCCGCACTATGGACGCATGGCCCTACCCCCTCCGCGACACACNAGCCCANGCCC
ACGCACCCNACCAAACATTACATAANAGCACCCCACGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8259#0      -----CCGCGATCTCGACGCGCACACACAGTCCAGTGGTGACGGCAAAGTGGCTTCAGGA 55
consensus_8259#1      -----------------------------------------CCGCAAAGTGGCTTCAGGA 19
consensus_8259#2      GCAGAATCCCCGACGGTTANTCACACACAGTCCAGTGGTGACGGCAA-GTGGCTTCAGGA 59
                                                               * **** ************

consensus_8259#0      AAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTT-TGTGTGTGCGCGCAT 114
consensus_8259#1      AAAGTTCGCTCGACAAACGCAGTGAAAAACGCAAGGCTTGTGTT-TGTGTGTGCGCGCAT 78
consensus_8259#2      AAAGTTCGCTCGACAAACGCAGTGAAAAACTCAAGGCTTGTGTTATGTGTGTGCGCGCAT 119
                      ****************************** ************* ***************

consensus_8259#0      GTGTGTGTGAT-TGTCTTGTTTT---TCCGTGCGTGCGTGCTGTGCTGTGCTGTGT-TGT 169
consensus_8259#1      GTGTGTGTGAT-TGTCTTGTTTT---TCCGTGCGTGCGTGCTGTGCTGTGCTGTGT-TGT 133
consensus_8259#2      GTGTGTGTGATATGTCTTGTTTTATACCGATGCGTGCGTGCTGTGCTGTGCTGTGTATGT 179
                      *********** ***********    *  ************************** ***

consensus_8259#0      GTT-TACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAA-CAAAGTCG--CTTG 225
consensus_8259#1      GTT-TACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAAACACAGTCG--CTTG 190
consensus_8259#2      GTTATACGCGTGTCGAACAGCAAAAGGAAAAGCTGTGCCAAAAAA-CAAAGTCGGCTNTG 238
                      *** ***************************************** ** *****    **

consensus_8259#0      CGCACG-CCCTGGAGAA-GGAACCGT-CGAAGCGCAAGGGCGAACGACTGGCAAGTGTGT 282
consensus_8259#1      CGCACG-CCCTGGAGGA-GGAACCGT-CGAAGCGCAAGGGCGAACGACTAGCAA------ 241
consensus_8259#2      CGCACNGCCCTGGAGAAAGGAACCGTACGACAGGCNGGCANNAAGGGGCCGAAAC----- 293
                      *****  ******** * ******** ***   **  *    ** *    * **      

consensus_8259#0      GAGAGAGTGAGAGAGCGAAAGACCGAGAGCGAGCGGGAGGGAGACGGAAAGACAGAGAAA 342
consensus_8259#1      -------------------------------------------------------AGAAA 246
consensus_8259#2      -----------------------------------------------AGATCTTGGGCGC 306
                                                                              *   

consensus_8259#0      ACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACG 402
consensus_8259#1      ACTTCCTCCTCTCTACACTCTACACAGCCATTATTCATCGCTGCTCACGCATCCAAAACG 306
consensus_8259#2      ACACGCTCGTTGTTG-ACGC-ACG-AACGTTTGACGGACGAAGGCCGNA-ACAGGACCCC 362
                      **   *** *   *  ** * **  * *  **      **  *  *    *    *  * 

consensus_8259#0      GTGTTTGATAAGGGTGGTGCGCTGGAA-GTGCGCTCATCTACCCCAGAGAATCCCGTACA 461
consensus_8259#1      GTGTTTGATAAGGGTGGTGCGCTGGAA-GTGCGCTCATCTACCCCAGAGAATCCCGTACA 365
consensus_8259#2      GGATCGAAGACCGAAGACGTGCGGAAGCGNGGACGAACCGGGACAAAGGAACCCAGGATT 422
                      *  *   * *  *  *  * ** * *  * *  *  * *    * *  *** ** * *  

consensus_8259#0      CCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCA 521
consensus_8259#1      CCTACACACACGCAGCACTGTGTCCCGCCCGTGGTGTGCCCGTTGGAAGTGTGTAAGTCA 425
consensus_8259#2      ACAACGCTTTCAC-------TACCCTTCCTTCAGTNAAACAACAACCAATCCCTAAAACA 475
                       * ** *   * *       *  **  **    **    *       * *   ***  **

consensus_8259#0      TCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCGT-GCAAGCGGAAGAGCAGAGAG 580
consensus_8259#1      TCGGGGACGGCGCGCTGTAGCGTTATCATTGTCCGTCGTTGCAAGCGGAAGAGCAGAGAG 485
consensus_8259#2      AGCCAAGTGAGGACCAATAGTANAA----TATCCAAAGT-ACAAG--GGGGNTTGGGAGT 528
                              *  *  *  ***    *    * ***   **  ****  *  *    *    

consensus_8259#0      GAGCAGGCGGGTTGCGGTCCCATTAGCGAA-AAAAAA-GGTGGACAATCGTCGCCGTCGG 638
consensus_8259#1      GAGCGAGCGGGTTGCGGTCCCATTAGCGAA-AAAAAAAGGTGGACAATCGTCGCCGTCGG 544
consensus_8259#2      GACCATNCCGGGTGCGATTTNCCCTACGGTCGAGAAAACNAGGGCGATGGNCGATATCAC 588
                      ** *   * ** **** *        **    * ***    ** * ** * **   **  

consensus_8259#0      CAAGTAGCAGCGGAAA-GCAGCAACACAGCAAGCGCACACGGACACAGAAA-CAC-GGAT 695
consensus_8259#1      CAAGTAGCAGCGGAAAAGCAGCACCACAGCAAGCGCACACGGACACAGAAAACAC-CGGT 603
consensus_8259#2      CGGGCACCTCTACCAC----GCGCCGCACTATGGACGCATGGCCCTACCCCCTCCGCGAC 644
                      *  * * *      *     **  * **  * *  * ** ** *  *       *  *  

consensus_8259#0      GTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGTCCGGTCCGTCCGTCCCGACAC 755
consensus_8259#1      TTGTGTGTGTGCGCGCGCTCGGTGTCGTCATCGGTCCGTCCGGTCCGTCCGTCCCGACAC 663
consensus_8259#2      ACACNAGCCCANGCCCACGCACCCNACCAAACATTACATAANAGCACCCCACGC------ 698
                            *     ** * * *         * *  * * *     *   **   *      

consensus_8259#0      AGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGTGTGTGGCCCGGCCGCACACGGAGACAG 815
consensus_8259#1      AGTCGGTCAGCCGAAAGGGAGAGAAAAAAGTGTGT--GGCCCGGCCGCACACGGAGACAG 721
consensus_8259#2      ------------------------------------------------------------
                                                                                  

consensus_8259#0      CACTCACACACATCTCAGCAGACGGCCCAAACACAGAGTGTGACGACACCAGAGGAGGAG 875
consensus_8259#1      CACTCACACACATCTCAGCAGA---------------GTGTGACGACACGAGAGGAGGAG 766
consensus_8259#2      ------------------------------------------------------------
                                                                                  

consensus_8259#0      GTGTGGAATCGTAGTAGTGTGAGTACACCGTCACCACCCACTACCACCACTTGATCGACA 935
consensus_8259#1      GTGTAGAACCGTAGTAGTGTGAGTACACCGTCACCACCCACTACCACCACCTGATCGACA 826
consensus_8259#2      ------------------------------------------------------------
                                                                                  

consensus_8259#0      ACAGGCGACAGCATGAACGAAATCGAAGCGCTGCGCCAGGAGGCGGAAACGCTCAAAAAT 995
consensus_8259#1      ACAGGCGACAGCATGAACGAAATCGAAGCGCTGCGTCAGGAGGCGGAAACGCTCAAAAAT 886
consensus_8259#2      ------------------------------------------------------------
                                                                                  

consensus_8259#0      GCGATCCGGGACGCGCGGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACA 1055
consensus_8259#1      GCGATCCGCGACGCG-AGGAAGGCGGTGTGCGACACGTCCATCCTGCAGGCGACGGCACA 945
consensus_8259#2      ------------------------------------------------------------
                                                                                  

consensus_8259#0      GCTGGCAAGCCGTCGGTCGCATCCAGCTCCGGACGCGCCGCACGCTCCGGGGCCATCTGG 1115
consensus_8259#1      GCTGG-AAGCCGTCGGTC------------------------------------------ 962
consensus_8259#2      ------------------------------------------------------------
                                                                                  

consensus_8259#0      CGAAGATCTACGCGATGCACTGGGGCAACGATTCGCGCTACCTGGTGTC 1164
consensus_8259#1      -------------------------------------------------
consensus_8259#2      -------------------------------------------------