cluster # 8287

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Anopheles gambiae
cluster # 8287 cluster # 8287 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8287#0 length = 941 sequences # 7

consensus_8287#1 length = 856 sequences # 1
consensus_8287#2 length = 844 sequences # 1

consensusID : consensus_8287#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 941
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGT-CCGAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAG-AACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA-CCTGGATGTGGGTCTGGCCCGCACCACCACC-GGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCC-GGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCAACTACATGCGCACGCTGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGCCCCCCCCCCCGGTCGATTGTGTGAGACAAACGATTTGAGATGTTGTGAATAAATGTAATGTTTCTATTCAGTCGAATTGAATCA]

[+] EMBL BM597823             [CCGCCCACGCGTCCGCCCACGCGTCCGCCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAG AACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA CCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCC GGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACA                                                                                                                                                                                                                                                                   ]
[+] EMBL BM607944             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGT CCGAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAG AACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCCTGGATGTGGGTCTGGCCCGCACCACCACCGGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCC GGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAA                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM581489             [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGT CCGAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAG AACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA CCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM640042             [                        CCGCCCACGCGT CCG  CGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAG AACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA CCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGGCTAC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM616531             [                        CCGCCCACGCGT CCG     GTTGAGCGTTTCTTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGTAACAAGCAGTACTTCGAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAATACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGATCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGACTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGGGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA CCTGGATGTGGGTCTGGCCCGCACCACC                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM580195             [                        CCGCCCACGCGT CCGAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCTAAATGGGGTTCGTTAAGGTAGTGAAG AACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCATATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAATACCTGGTCGAGCCGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS09FQY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGCCCGCACCACCACCGGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCC GGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCAACTACATGCGCACGCTGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGCCCCCCCCCCCGGTCGATTGTGTGAGACAAACGATTTGAGATGTTGTGAATAAATGTAATGTTTCTATTCAGTCGAATTGAATCA]




>consensus_8287#0
CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAACGTGTTGAGCGTTTCGTGT
GTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAG
TACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTAT
GCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTG
ATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGC
GATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGT
CTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAG
AAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTG
GTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCC
CGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTG
AACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAAC
GCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCAACTACATGCGCACGCTG
GAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATC
AAGGCTGATGATATCGAAAACATCTACAAGAACGTCCCCTCTCCGGTGGGCGTGTGTTGT
GAAGTGATGGAGCGCGCCCCCCCCCCCGGTCGATTGTGTGAGACAAACGATTTGAGATGT
TGTGAATAAATGTAATGTTTCTATTCAGTCGAATTGAATCA

consensusID : consensus_8287#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 856
fasta sequence

                              [ACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCAACTACATGCGCACGCTGGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGACCAGCCCCCAGGTCGATTTTTTGAGAC]

[+] EMBL CNS09FQX             [ACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCAACTACATGCGCACGCTGGGAGGAGGAGGACGAGGAGGCGTTCAAGCGCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAACGTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGACCAGCCCCCAGGTCGATTTTTTGAGAC]




>consensus_8287#1
ACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAAT
GGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCG
TCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAA
AAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCAC
CTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCA
CGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCAC
CGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGG
CTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGC
CTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGG
CGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCC
GGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGG
CCTGCACGTCGCCAACTACATGCGCACGCTGGGAGGAGGAGGACGAGGAGGCGTTCAAGC
GCCAGTTCAGCAAGTACATCTCGCTGGGCATCAAGGCTGATGATATCGAAAACATCTACA
AGAACGTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGACCAGCCCCCAG
GTCGATTTTTTGAGAC

consensusID : consensus_8287#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 844
fasta sequence

                              [TTGATTAATTGGGCCCTATTTGTTCTGTTGTAGCGATGACTTTCGTTTAAATCCAAAATCCAGTACCGTTTTGAAGCCGAGATCCGTTTTAAACTCCACTGTTCTCGCGCACCCAGTCGCGGACGACTGCAACCCGCGAGTACACTCCCGGATAACCGGCCTGAGCGCAACCGTAGCCCCACGAAACCACACCAACCAGCTTGCCATCAGCAACCAGCGGACCACCGGAGTCTCCCTGGCAAGCGTCCTTTCCGCCCTGCTGGTATCCGGCACACAGCATACGATCGGTAACACCCTCCGAAGTCACTGTAGGCTTTGTTGCACTCCTTTTGGTTAACGGTCGGCACGTTGGCAGCCCGCAGAACGGCATTCGATTCGGCCGCACTCTGGGTGTTGCCCCAGCCAGACACAGTCGTCATGGTTCCATCCTTCACCGATTCGTCCTGTTTCGGCAGACCAACCGGCTGCACCGCATCGCTGAAGGTAAGTTCGTCTTCCAGCTCCAGCAGGGAGTAGTCGAAATCGATGCTGCTGCTATCGTATTTGGGATGCTGCACGACGCGAGCCACACGAACCACGGTTCCTCCCGAAGCGTGACGCGATGTTCCCAGGCGCACGGTCAAGCTGGAGGTCGAGGCACCGGCGGTCAGGTTAGCGGCCGTGAGCACCCACTTGCTGGACAGGACGGAACCACCGCAGTTGTGGCGCTTGTTGTACTGGAGCGACACCTGAAACGGTGCATCCGACACGTCGATCTCGAACCCACCGACAATGCGTTGGCCAACGGCGTACCGGGGGTCGCGGGGAGAAACTCGGGCTCGGTCTTACAAGCCGATGGCGCTGG]

[+] EMBL CNS09960             [TTGATTAATTGGGCCCTATTTGTTCTGTTGTAGCGATGACTTTCGTTTAAATCCAAAATCCAGTACCGTTTTGAAGCCGAGATCCGTTTTAAACTCCACTGTTCTCGCGCACCCAGTCGCGGACGACTGCAACCCGCGAGTACACTCCCGGATAACCGGCCTGAGCGCAACCGTAGCCCCACGAAACCACACCAACCAGCTTGCCATCAGCAACCAGCGGACCACCGGAGTCTCCCTGGCAAGCGTCCTTTCCGCCCTGCTGGTATCCGGCACACAGCATACGATCGGTAACACCCTCCGAAGTCACTGTAGGCTTTGTTGCACTCCTTTTGGTTAACGGTCGGCACGTTGGCAGCCCGCAGAACGGCATTCGATTCGGCCGCACTCTGGGTGTTGCCCCAGCCAGACACAGTCGTCATGGTTCCATCCTTCACCGATTCGTCCTGTTTCGGCAGACCAACCGGCTGCACCGCATCGCTGAAGGTAAGTTCGTCTTCCAGCTCCAGCAGGGAGTAGTCGAAATCGATGCTGCTGCTATCGTATTTGGGATGCTGCACGACGCGAGCCACACGAACCACGGTTCCTCCCGAAGCGTGACGCGATGTTCCCAGGCGCACGGTCAAGCTGGAGGTCGAGGCACCGGCGGTCAGGTTAGCGGCCGTGAGCACCCACTTGCTGGACAGGACGGAACCACCGCAGTTGTGGCGCTTGTTGTACTGGAGCGACACCTGAAACGGTGCATCCGACACGTCGATCTCGAACCCACCGACAATGCGTTGGCCAACGGCGTACCGGGGGTCGCGGGGAGAAACTCGGGCTCGGTCTTACAAGCCGATGGCGCTGG]




>consensus_8287#2
TTGATTAATTGGGCCCTATTTGTTCTGTTGTAGCGATGACTTTCGTTTAAATCCAAAATC
CAGTACCGTTTTGAAGCCGAGATCCGTTTTAAACTCCACTGTTCTCGCGCACCCAGTCGC
GGACGACTGCAACCCGCGAGTACACTCCCGGATAACCGGCCTGAGCGCAACCGTAGCCCC
ACGAAACCACACCAACCAGCTTGCCATCAGCAACCAGCGGACCACCGGAGTCTCCCTGGC
AAGCGTCCTTTCCGCCCTGCTGGTATCCGGCACACAGCATACGATCGGTAACACCCTCCG
AAGTCACTGTAGGCTTTGTTGCACTCCTTTTGGTTAACGGTCGGCACGTTGGCAGCCCGC
AGAACGGCATTCGATTCGGCCGCACTCTGGGTGTTGCCCCAGCCAGACACAGTCGTCATG
GTTCCATCCTTCACCGATTCGTCCTGTTTCGGCAGACCAACCGGCTGCACCGCATCGCTG
AAGGTAAGTTCGTCTTCCAGCTCCAGCAGGGAGTAGTCGAAATCGATGCTGCTGCTATCG
TATTTGGGATGCTGCACGACGCGAGCCACACGAACCACGGTTCCTCCCGAAGCGTGACGC
GATGTTCCCAGGCGCACGGTCAAGCTGGAGGTCGAGGCACCGGCGGTCAGGTTAGCGGCC
GTGAGCACCCACTTGCTGGACAGGACGGAACCACCGCAGTTGTGGCGCTTGTTGTACTGG
AGCGACACCTGAAACGGTGCATCCGACACGTCGATCTCGAACCCACCGACAATGCGTTGG
CCAACGGCGTACCGGGGGTCGCGGGGAGAAACTCGGGCTCGGTCTTACAAGCCGATGGCG
CTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8287#0      CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAA-CGTGTTGAGCGTTTCGT- 58
consensus_8287#1      ------------------------------ACGTGTAGAAAACGTGTTGAGCGTTTCGT- 29
consensus_8287#2      -------------------------------TTGATTAATTGGGCCCTATTTGTTCTGTT 29
                                                         *       *   *    ***  ** 

consensus_8287#0      GTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGC 118
consensus_8287#1      GTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGC 89
consensus_8287#2      GTAGCGATGACTTTC--GTTTAAATCCAAA----ATCCAGTACCGTTTTGAAGC-CGAGA 82
                      **  ***  * ** *   ***** ** ***     * *  **  **  *****  * ** 

consensus_8287#0      AGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACT 178
consensus_8287#1      AGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACT 149
consensus_8287#2      TCCGTTTTAAACTCCACT-------GTTCTCGCGCACCCAGTCGCGGACGACTG--CAAC 133
                           ** ** *   *         ****   ***   *    * * * *** *   *  

consensus_8287#0      ATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGC 238
consensus_8287#1      ATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGC 209
consensus_8287#2      CCGCGAGTACACTCCCGGATAACCGGCCTGAGCGCAACCGTAGCCCCACGAAACCACACC 193
                        **  * *  * ** *  *  ** *    *   ***    * * *  ****    *  *

consensus_8287#0      TGATCGTTCGCC-TGAGCAACCGCGACATCACCTG---CCAGATCGCGTACGCCCGCATC 294
consensus_8287#1      TGATCGTTCGCC-TGAGCAACCGCGACATCACCTG---CCAGATCGCGTACGCCCGCATC 265
consensus_8287#2      AACCAGCTTGCCATCAGCAACCAGCGGACCACCGGAGTCTCCCTGGCAAGCGTCCTT-TC 252
                           * * *** * *******     * **** *   *    * **   ** **   **

consensus_8287#0      GAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAG 354
consensus_8287#1      GAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAG 325
consensus_8287#2      CGCCCTGCTGGTATCCGGCACACAGCATACGATC----GGTAACACCCTCCGAAGTCACT 308
                            * * * ***  *  * * ** ***   *    * *  ***  * **  ** *  

consensus_8287#0      GTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATC 414
consensus_8287#1      GTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATC 385
consensus_8287#2      GTAGGCTTTGTTG-CACTCCTTTTGGTTAACG-GTCGGCACGTTGGCAGCCCGCAGAA-- 364
                      ** **  *      *  * *    *  **  *   ***   * * *  ** *** * *  

consensus_8287#0      CTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACC-GATGTGACCGGCGAGGA 473
consensus_8287#1      CTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACC-GATGTGACCGGCGAGGA 444
consensus_8287#2      CGGCATTCGATTCGGCCG--CACTCTGGGTGTTGCCCCAGCCAGACACAGTCGTCATGGT 422
                      * ***   * * ** * *  *** ***   *  * *    ** **      ** *  ** 

consensus_8287#0      ---GTACCTGGTCGAGCCGGTCGAT---GAAGGACCGGCCGCCTTCCGGTGCTACCTGGA 527
consensus_8287#1      ---GTACCTGGTCGAGCCGGTCGAT---GAAGGACCGGCCGCCTTCCGGTGCTACCTGGA 498
consensus_8287#2      TCCATCCTTCACCGATTCGTCCTGTTTCGGCAGACCAACCGGCTGCACCGCATCGCTGAA 482
                          * * *   ***  **  *  *   *   ****  *** ** *      *  *** *

consensus_8287#0      TGTGGGTCTGGCCCGCACCACCACCGGTGCCCG--TGTGTTCGGCGCCATGA--AGGGTG 583
consensus_8287#1      TGTGGGTCTGGCCCGCACCACCACCGGTGCCCG--TGTGTTCGGCGCCATGA--AGGGTG 554
consensus_8287#2      GGTAAGTTCGTCTTCCAGCTCCAGCAGGGAGTAGTCGAAATCGATGCTGCTGCTATCGTA 542
                       **  **  * *   ** * *** * * *       *   ***  **       *  ** 

consensus_8287#0      CCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCG 643
consensus_8287#1      CCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCG 614
consensus_8287#2      TTTGGGATGCTGCACGACGCGAGCCACACGAACCACGGTTCCTCCCGAAGCGTGACGCGA 602
                           ****  * **    *   ** ***        *    *****        ***  

consensus_8287#0      AGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCA 703
consensus_8287#1      AGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGCCTGCACGTCGCCA 674
consensus_8287#2      TGTTCCCAGGC----GCACGGTCAAGC-TGGAGGTCGAGGCACCGGCGGTCAGGTTAGCG 657
                       *  *    **     * ***  * **   * *  *    *  ****   ** **   * 

consensus_8287#0      ACTACATGCGCACGCTGG-AGGAGGAGGACGAGGAGGC----GTTCAAGCGCCAGTT--- 755
consensus_8287#1      ACTACATGCGCACGCTGGGAGGAGGAGGACGAGGAGGC----GTTCAAGCGCCAGTT--- 727
consensus_8287#2      GCCGTGAGCACCCACTTGCTGGAC-AGGACGGAACCACCGCAGTTGTGGCGCTTGTTGTA 716
                       *     ** * * ** *  ***  ******      *    ***   ****  ***   

consensus_8287#0      CAGCAAGTACATCTCG--CTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAAC 813
consensus_8287#1      CAGCAAGTACATCTCG--CTGGGCATCAAGGCTGATGATATCGAAAACATCTACAAGAAC 785
consensus_8287#2      CTGGAGCGACACCTGAAACGGTGCATCCGACACGTCGATCTCGAACCCACCGACAATG-C 775
                      * * *   *** **    * * *****      *  *** *****  ** * ****   *

consensus_8287#0      GTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGCCCCCCCCC-CCGGTCG 872
consensus_8287#1      GTCCCCTCTCCGGTGGGCGTGTGTTGTGAAGTGATGGAGCGCGACCAGCCCC-CAGGTCG 844
consensus_8287#2      GTTGGCCAACGGCGTACCGGGGGTCGCGGGGAGA-AACTCGGGCTCGGTCTTACAAGCCG 834
                      **   *   * *     ** * ** * *  * **     ** *  *   *   *  * **

consensus_8287#0      ATTGTGTGAGACAAACGATTTGAGATGTTGTGAATAAATGTAATGTTTCTATTCAGTCGA 932
consensus_8287#1      ATTTTTTGAGAC------------------------------------------------ 856
consensus_8287#2      ATGGCGCTGG-------------------------------------------------- 844
                      **       *                                                  

consensus_8287#0      ATTGAATCA 941
consensus_8287#1      ---------
consensus_8287#2      ---------