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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8295#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 991 fasta sequence
[TTTTTTCTTAAATTAAAAGATTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTAACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAAT-CTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCAC-AAAACATTTGATCCGTAATGCCACCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTCCAATGGGTTGAACCTTTTCGCTAAACGTAAGCTCGTTTTTCAACTCCAGTGGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTTTGCTGCGGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTGTAGTTAAACCTGAAGAGGGTGCATCCGAGAAATCGATCACAAATCCACCGACAATCCGTTTGCCAGCCAGGTATGGCGGACGCGTGGGCGG]
[+] EMBL CNS08P8P [TTTTTTCTTAAATAAAAAGATTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGAAATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTAACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAAT CTTGTCGACACGTATCTTGATCGCCCTGTTTGTACCCCGCAC AAAACATTTTTTCCGTAATGCCACCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTCCAATGGGTTGAACCTTTAAAAAAAAAGTAAGCTCGTTTTTCAACTCCAGTGGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTTTGCTGCGGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTGTAGTTAAACCTGAAGAGGGTGCATCCGAGAAATCGATCACAAATCCACCGACAATCC ]
[+] EMBL CNS08QCN [ TTTACTACACTTTAAAGATTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCCCCTACACCCCACTAGTCGTACGAATCCAGTAACGCGCACTTGCCACACGTGCGT ]
[+] EMBL CNS092H7 [ ttgttTTAGAAGATTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTT CCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTCACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAAT CTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCAC AAAACATTTGATCCGTAATGCCACCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAAACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTCCCGGCAGTACAATGGGTTGAACCTTTTCGCTAAACGTAAGCTCGTTTTTCAACTCCAGTGGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCGACACGTACGAGGGTACCACCGGATGCATGTCCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTAATCGTTGATGC ]
[+] EMBL CNS08CMX [ GATTGTTTTTGGTATTTTATTGATATCGGACTGCATTTTT CCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTCACGCGCACTTGCCACACGTGCGTTCACCCCCGGATAGCCTGCCAGAACGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAAT TTTGTGGACACGTATCTTGACCGCCCTGTTTGTACCCCGCAC AAAACATTTGATCCGTAATGCCACCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCGGGTTAACGGTCGGTACGTTTTTGGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAAACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTCCAATGGGTTGAACCTTTTCGCTAAACGTAAGCGCGTTTTTCAACTCCAGTGGGGCAATTTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCGACACGTACGAGGGTACCACCGGATGCATGTTCGGACGATCCTACG ]
[+] EMBL CNS08GFL [ TGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATAACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGAAATTGGTTCTAGCAACAAAAACGACAGTGGGAACAT ]
[-] EMBL BM597911 [ ACGGACCGCCCGAATCCTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAAACATTTGATCCGTAATGCCACCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTGCAATGGGTTGAACCTTTTCGCTAAACGTAAGCTCGTTTTTCAACTCCAGTAGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTGTGCTGCGGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTGTAGTGAAACCTG ATAGGGTGCATCCGAGATATCGATCACAAATCCACCGACAATCCGTTTGCCAGCCAGGTATGGCGGACGCGTGGGCGG]
consensusID : consensus_8295#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 919 fasta sequence
[TTTGTTTTTTTTTTTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTTGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTCACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAATCTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAACATTTGATCCGTAATGCCA-CCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTGCAATGGGTTGAACCTTTTCGCTAAACGTAAGCTCGTTTTTCAACTCCAGTAGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTTTGCTGCGGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTGTAGTGAAACCTGGATAGGGTGCATCC]
[+] EMBL CNS08N1J [TTTGTTTTTTTTTTTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTTGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTCACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAATCTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAACATTTGATCCGTAATGCCA CCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTGCAATGGGTTGAACCTTTTCGCTAAACGTAAGCTCGTTTTTCAACTCCAGTAGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTTTGCTGCGGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTGTAGTGAAACCTGGATAGGGTGCATCC]
[+] EMBL CNS09OHG [ TATTGATATCGGACTGCATTTTTCCCATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTTGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTCACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAATCTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAAAATTTGATCCGTAATGCCACCCGTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTGCAATGGGTTGAACCTTTTCGCTAAACGTAAGCTCGTTTTTCAACTCCAGTAGGGCAATGTCGTAGTTGTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTCGGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTGTGCTGCGGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTGTAGTGAAACCTGAATA ]
[+] EMBL CNS08RZM [ TATTGAAATCGGACTGCATTTTTCCCATTCAGGCCAATAACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATACGAGTGGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAATTGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTAGATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTCACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCCCCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAATCTTGTCGACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAACATTTGATCCGTAATGCCA CCGTAAATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTTTTGCTCGTAGAACATCGTTCGAATCGGCCTCACTCAGTTTCAAACCCCAGCCAGAAACGATTCCCATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTTCAATGGGTTGAACCTTTTCGCTAAACGTAAGCCCGTTTTTCAACTCCAGTAGGGCAATTTCGTATTTTTTCTTGCTACCATGCATAGGATGAGGCACAATACGAGCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8295#0 TTTTTTCTTAAATTAAAAGATTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCC 60
consensus_8295#1 -TTTGTTTTTTTTT------TTGTGTTTGGTATTTTATTGATATCGGACTGCATTTTTCC 53
*** * ** ** ****************************************
consensus_8295#0 CATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATAC 120
consensus_8295#1 CATTCAGGCCAATTACGACACACATATCCGTTAAAGCATTGGTCACATACATACTTATAC 113
************************************************************
consensus_8295#0 GAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAAT 180
consensus_8295#1 GAGTTGCATTTGCCATATGTATTTATGCTTGCAATAACTTTCGTCTACAATTCTCGAAAT 173
************************************************************
consensus_8295#0 TGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTGGGAACATTCAACAATTA 240
consensus_8295#1 TGTTATTCATGAGATATTGGTTCTAGCAACAAAAACGACAGTTGGAACATTCAACAATTA 233
****************************************** *****************
consensus_8295#0 GATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTA 300
consensus_8295#1 GATCTACGCAATGTGATACTGGATAGGCTCCTACACTCCACTAGTCGTACGAATCCAGTC 293
***********************************************************
consensus_8295#0 ACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCC 360
consensus_8295#1 ACGCGCACTTGCCACACGTGCGTACACCCCCGGATAGCCTGCCAGAGCGCATTCGTGGCC 353
************************************************************
consensus_8295#0 CCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAATCTTGTCG 420
consensus_8295#1 CCAAGAAATGACGCCGATCAGCTTACCCTCAGCAACGAACGGACCGCCCGAATCTTGTCG 413
************************************************************
consensus_8295#0 ACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAACATTTGATCCGTAATGCCACC 480
consensus_8295#1 ACACGTATCTTGACCGCCCTGTTTGTACCCCGCACAAAACATTTGATCCGTAATGCCACC 473
************************************************************
consensus_8295#0 GTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGC 540
consensus_8295#1 GTACATGGACTGGTAGGCTTTGTTACATTCCTGCTGGTTAACGGTCGGTACGTTTGTTGC 533
************************************************************
consensus_8295#0 TCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCC 600
consensus_8295#1 TCGTAGAACATCGTTCGAATCGGCCTCACTCAGTGTCAAACCCCAGCCAGAGACGATTCC 593
************************************************************
consensus_8295#0 CATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTCCAATGGGTTGAACCTTTTC 660
consensus_8295#1 CATTGTTCCTTCCTCGATCGGTTCATCCTGTTCCGGCAGTGCAATGGGTTGAACCTTTTC 653
**************************************** *******************
consensus_8295#0 GCTAAACGTAAGCTCGTTTTTCAACTCCAGTGGGGCAATGTCGTAGTTGTTCTTGCTACC 720
consensus_8295#1 GCTAAACGTAAGCTCGTTTTTCAACTCCAGTAGGGCAATGTCGTAGTTGTTCTTGCTACC 713
******************************* ****************************
consensus_8295#0 ATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTC 780
consensus_8295#1 ATGCATAGGATGAGGCACAATACGAGCTACACGTACGACGGTACCACCGGATGCATGTTC 773
************************************************************
consensus_8295#0 GGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTTTGCTGC 840
consensus_8295#1 GGACGATCCTACGCGGACGGTTGGCTTCGAGGGTGCGTTATCGTTGATGCAGTTTGCTGC 833
************************************************************
consensus_8295#0 GGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTG 900
consensus_8295#1 GGTTAGGATCCACTTGCTACTCAGGATAGAGCCTCCACAGTTATGATCGTCGTCGTACTG 893
************************************************************
consensus_8295#0 TAGTTAAACCTGAAGAGGGTGCATCCGAGAAATCGATCACAAATCCACCGACAATCCGTT 960
consensus_8295#1 TAGTGAAACCTGGATAGGGTGCATCC---------------------------------- 919
**** ******* * ***********
consensus_8295#0 TGCCAGCCAGGTATGGCGGACGCGTGGGCGG 991
consensus_8295#1 -------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||