cluster # 8311

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Anopheles gambiae
cluster # 8311 cluster # 8311 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8311#0 length = 1648 sequences # 8

consensus_8311#1 length = 764 sequences # 1
consensus_8311#2 length = 676 sequences # 1

consensusID : consensus_8311#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1648
fasta sequence

                              [CCGCCCACGCGTCC-GGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCAACACCCCCTAGCTGCCGCGCGCGATGTCGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCATCGATGGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGAAGGTGACGACAGTGTGCATGCAGAAACCTCCGCCAGATTTTCGCACCAACTTTGAGGCCACACATCCGCCTATTCTCATAGACAATGGGCTTGCCATACTGGAAAACGAGAAGATCGAGCGGCACATCATGAAATCGGTGCCCGGTGGATACAATCTTTTCGTGCAGGACAAAGAGGTGGCCACGCTGATAGAAAATCTGTACTCGAAGCTAAAGCTGATGCTGGTGAAAAAGGACGAGAACAAGAACAACGCGCTGCTGGTGCATCTGCAAAAGATCAACGATCATCTGGCGGCCCGCGGCACCCGCTTCCTCACCGGCGACACGATGTGCTGCTTCGACTGTGAGCTGATGCCGCGCCTGCAGCACATCAGAGTGGCCGGCAAATACTTCGTTGACTTCGATATACCAAAACATTTAACGGCGTTGTGGCGGTACATGTACCATATGTATCAGCTAGACGCGTTCACGCAGTCCTGTCCAGCCGATCAGGATATCATCAACCATTACAAACTGCAGCAGATGCTGAAAATGAAAAAGCACGAAGAACTGGAGACGCCAACTTTCACCACATCGATTCCCGTTGATTTGAACGAGCAGTAAGTGCGCTACTATTTAGGTTGGACCGCGCTACAAACGGCGGTGAAAAAACAGCAACAGTGAAAACGAAAAAAAAATCCATGCAACAATATAAAAAAAAAACAGAACACCACACAAAATTGTAGCAGTAGAAAAGAGGGTAGGAATTACGAATAGTTTTAGACGAATGATTCCAAAGTCTACTATCTACCAGCATGATGCACTGGTGGGGCATCGATTTTGAATCACGTCCAGCGGGAGAGAAACACAATCAACACACATTGAACCACCACAACTTCTTTCCGCTTCAATTACGCTAATTGTTTTTGTCTTTCTTATTTTTGAGTAATCTTATCACTTCACGTCGCTTTTTAGAANGAGATTTTTTGTGTTTCGATGTATCGTGTACAGCTTGTGAAACTTGTACTTGTTCTANGTGGGACCGAGCGGGTCCNGCTTATCTATTTTCTACA]

[+] EMBL BM575183             [CCGCCCACGCGTCCGGGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCAACACCCCCTAGCTGCCGCGCGCGATGTCGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM610824             [CCGCCCACGCGTCC GGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM642379             [cgaCCCACGCGTCC GGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCAACACCCCCTAGCTGCCGCGCGCGATGTCGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCATCGATGGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGAAAGTGACGACAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM651602             [             c cGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCAACACCCCCTAGCTGCCGCGCGCGATGTCGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCATCGATGGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGAAGGTGACGACAGTGTGCATGCAGAAACCTCCGCCAGATTTTCGCACCAACTTTGAGGCCACACATCCGCCTATTCTCATAAACAATGGGCTTGCCATACTGGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM641711             [                                           ccgCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCAACACCCCCTAGCTGCCGCGCGCGATGTCGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCATCGATGGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGAAGGTGACGACAGTGTGCATGCAGAAACCTCCGCCAGATTTTCGCACCAACTTTGAGGGCACACATCCGCCTATTCTCATAGACAATGGGCTTGCCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM609888             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgCGATCAGCTTGAAGGTGACGACAGTGTGCATGCAGAAACCTCCGCCAGATTTTCGCACCAACTTTGAGGCCACACATCCGCCTATTCTCATAGACAATGGGCTTGCCATACTGGAGAACGAGAAGATCGAGCGGCACATCATGAAATCGGTGCCCGGTGGATACAATCTTTTCGTGCAGGACAAAGAGGTGGCCACGCTGATAGAAAATCTGTACTCGAAGCTAAAGCTGATGCTGGTGAAAAAGGACGAGAACAAGAACAACGCGCTGCTGGTGCATCTGCAAAAGATCAACGATCATCTGGCGGCCCGCGGCACCCGCTTCCTCACCGGCGACACGATGTGCTGCTTCGACTGTGAGCTGATGCCGCGCCTGCAGCACATCAGAGTGGCCGGCAAATACTTCGTTGACTTCGATATACCAAAACATTTAACGGCGTTGTGGCGGTACATGTACCATATGTATCAGCTAGACGCGTTCACGCAGTCCTGTCCAGCCGATCAGGATATCATCAACCATTACAAACTGCAGCAGATGCTGAAAATGAAAAAGCACGAAGAACTGGAGACGCCAACTTTCACCACATCGATTCCCGTTGATTTGAACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM643363             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAAAGAGGTGGCCACGCTGATAGAAAATCTGTACTCGAAGCTAAAGCTGATGCTGGTGAAAAAGGACGAGAACAAGAACAACGCGCTGCTGGTGCATCTGCAAAAGATCAACGATCATCTGGCGGCCCGCGGCACCCGCTTCCTCACCGGCGACACGATGTGCTGCTTCGACTGTGAGCTGATGCCGCGCCTGCAGCACATCAGAGTGGCCGGCAAATACTTCGTTGACTTCGATATACCAAAACATTTAACGGCGTTGTGGCGGTACATGTACCATATGTATCAGCTAGACGCGTTCACGAAGACCTGTCCAGCCGATCAGGATATCATCAACCATTACAAACTGCAGCAGATGCTGAAAATGAAAAAGCACGAAGAGCTGGAGACGCCAACTTTCACCACATCGATTCCCGTTGATTTGAATGATCAGTAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX625406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCTGCTTCGACTGTGAGCTGATGCCGCGCCTGCAGCACATCAGAGTGGCCGGCAAATACTTCGTTGACTTCGATATACC AAACATTTAACGGCGTTGTGGCGGTACATGTACCATATGTATCAGCTAGACGCGTTCACGCAGTCCTGTCCAGCCGATCAGGATATCATCAACCATTACAAACTGCAGCAGATGCTGAAAATGAAAAAGCACGAAGAACTGGAGACGCCAACTTTCACCACATCGATTCCCGTTGATTTGAACGAGCAGTAAGTGCGCTACTATTTAGGTTGGACCGCGCTACAAACGGCGGTGAAAAAACAGCAACAGTGAAAACGAAAAAAAAATCCATGCAACAATATAAAAAAAAAACAGAACACCACACAAAATTGTAGCAGTAGAAAAGAGGGTAGGAATTACGAATAGTTTTAGACGAATGATTCCAAAGTCTACTATCTACCAGCATGATGCACTGGTGGGGCATCGATTTTGAATCACGTCCAGCGGGAGAGAAACACAATCAACACACATTGAACCACCACAACTTCTTTCCGCTTCAATTACGCTAATTGTTTTTGTCTTTCTTATTTTTGAGTAATCTTATCACTTCACGTCGCTTTTTAGAANGAGATTTTTTGTGTTTCGATGTATCGTGTACAGCTTGTGAAACTTGTACTTGTTCTANGTGGGACCGAGCGGGTCCNGCTTATCTATTTTCTACA]




>consensus_8311#0
CCGCCCACGCGTCCGGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAG
CCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCT
TCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATA
AACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGA
GCAGCGTTGGTTACAACGTCGTCGTCGTCGTCGTCCCTCCCTCTCCCCAGCGAGCACACT
CGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGT
GTGTGCAAGAGTGCCTGTACAAAATAAAACAACAACCAACCAACACCCCCTAGCTGCCGC
GCGCGATGTCGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAA
TAGAGCTGATAATTAAGGCATCAACCATCGATGGCAGAAGAAAGGGAGCATGTCTATTTT
GTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGAAGG
TGACGACAGTGTGCATGCAGAAACCTCCGCCAGATTTTCGCACCAACTTTGAGGCCACAC
ATCCGCCTATTCTCATAGACAATGGGCTTGCCATACTGGAAAACGAGAAGATCGAGCGGC
ACATCATGAAATCGGTGCCCGGTGGATACAATCTTTTCGTGCAGGACAAAGAGGTGGCCA
CGCTGATAGAAAATCTGTACTCGAAGCTAAAGCTGATGCTGGTGAAAAAGGACGAGAACA
AGAACAACGCGCTGCTGGTGCATCTGCAAAAGATCAACGATCATCTGGCGGCCCGCGGCA
CCCGCTTCCTCACCGGCGACACGATGTGCTGCTTCGACTGTGAGCTGATGCCGCGCCTGC
AGCACATCAGAGTGGCCGGCAAATACTTCGTTGACTTCGATATACCAAAACATTTAACGG
CGTTGTGGCGGTACATGTACCATATGTATCAGCTAGACGCGTTCACGCAGTCCTGTCCAG
CCGATCAGGATATCATCAACCATTACAAACTGCAGCAGATGCTGAAAATGAAAAAGCACG
AAGAACTGGAGACGCCAACTTTCACCACATCGATTCCCGTTGATTTGAACGAGCAGTAAG
TGCGCTACTATTTAGGTTGGACCGCGCTACAAACGGCGGTGAAAAAACAGCAACAGTGAA
AACGAAAAAAAAATCCATGCAACAATATAAAAAAAAAACAGAACACCACACAAAATTGTA
GCAGTAGAAAAGAGGGTAGGAATTACGAATAGTTTTAGACGAATGATTCCAAAGTCTACT
ATCTACCAGCATGATGCACTGGTGGGGCATCGATTTTGAATCACGTCCAGCGGGAGAGAA
ACACAATCAACACACATTGAACCACCACAACTTCTTTCCGCTTCAATTACGCTAATTGTT
TTTGTCTTTCTTATTTTTGAGTAATCTTATCACTTCACGTCGCTTTTTAGAANGAGATTT
TTTGTGTTTCGATGTATCGTGTACAGCTTGTGAAACTTGTACTTGTTCTANGTGGGACCG
AGCGGGTCCNGCTTATCTATTTTCTACA

consensusID : consensus_8311#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 764
fasta sequence

                              [GGCAAGAATTGCCCCGAGTGTTTTTTCTTATGGCGGCGCTATGTGCCCGTGCGANGCGTGAAGAAGGCTGATCTGAAGCGTATCTGCCAAAGCGACCGTGTGCCGCTGTACCTCACCTCGCTCACGAACATGGAGGGTGAGGAAAGCTTCGACGCCAGCTACGTCGGCGAAGCGGCGGAAGTGGTTGCAGGAGTTCATCTGCGACGACGAGCTGATTCTGATCCTGTGGCCCGAAAGCCCGACGGCTGCATCCATCATTCTGCGCGGTCCGAACGATTTCTACTTGCGAACGAGATTGGAGCTGCTCGATTCACCGATTGCACTGGTGCGTTGGCCGAAGCGTTGTTGCTTGGGACGGGGGTACACGAANCGGGTTGGGTGGGCTTGGGCCGGTGGGCTTGCGTTCGGACGGGCGGGGCCCTTGTCCGAATCTTAATTCTTGGGCAAAAAAAACTTTTTGGGCCCAACCCCTTCCGGGCCTTGGAAGCCTTCNCCCAGGCGAAAACCAAGCCTTGGGCCGGACTTTGNGGCCCGGAACGAGTTTATAGGCGCCAAAAAATTCCGGCCTTTGGCTTCGGGTTCCAAATTCACCCACCGGAAAAAAAAGCCGGCCCTTAGGGGCCCGGGTTCCAAAAACTTAGGCCNTGNGGGACCCAAAAGGGGCACTTTTGCCGGGAAACCNGGGGAAACCCCCTNTTGAGTTTTGGGAGCTGGCACANACAGGCCTTAAACCGGGTTTGGCACCCTTTAAACCCAAGGAAAAT]

[+] EMBL AL692791             [GGCAAGAATTGCCCCGAGTGTTTTTTCTTATGGCGGCGCTATGTGCCCGTGCGANGCGTGAAGAAGGCTGATCTGAAGCGTATCTGCCAAAGCGACCGTGTGCCGCTGTACCTCACCTCGCTCACGAACATGGAGGGTGAGGAAAGCTTCGACGCCAGCTACGTCGGCGAAGCGGCGGAAGTGGTTGCAGGAGTTCATCTGCGACGACGAGCTGATTCTGATCCTGTGGCCCGAAAGCCCGACGGCTGCATCCATCATTCTGCGCGGTCCGAACGATTTCTACTTGCGAACGAGATTGGAGCTGCTCGATTCACCGATTGCACTGGTGCGTTGGCCGAAGCGTTGTTGCTTGGGACGGGGGTACACGAANCGGGTTGGGTGGGCTTGGGCCGGTGGGCTTGCGTTCGGACGGGCGGGGCCCTTGTCCGAATCTTAATTCTTGGGCAAAAAAAACTTTTTGGGCCCAACCCCTTCCGGGCCTTGGAAGCCTTCNCCCAGGCGAAAACCAAGCCTTGGGCCGGACTTTGNGGCCCGGAACGAGTTTATAGGCGCCAAAAAATTCCGGCCTTTGGCTTCGGGTTCCAAATTCACCCACCGGAAAAAAAAGCCGGCCCTTAGGGGCCCGGGTTCCAAAAACTTAGGCCNTGNGGGACCCAAAAGGGGCACTTTTGCCGGGAAACCNGGGGAAACCCCCTNTTGAGTTTTGGGAGCTGGCACANACAGGCCTTAAACCGGGTTTGGCACCCTTTAAACCCAAGGAAAAT]




>consensus_8311#1
GGCAAGAATTGCCCCGAGTGTTTTTTCTTATGGCGGCGCTATGTGCCCGTGCGANGCGTG
AAGAAGGCTGATCTGAAGCGTATCTGCCAAAGCGACCGTGTGCCGCTGTACCTCACCTCG
CTCACGAACATGGAGGGTGAGGAAAGCTTCGACGCCAGCTACGTCGGCGAAGCGGCGGAA
GTGGTTGCAGGAGTTCATCTGCGACGACGAGCTGATTCTGATCCTGTGGCCCGAAAGCCC
GACGGCTGCATCCATCATTCTGCGCGGTCCGAACGATTTCTACTTGCGAACGAGATTGGA
GCTGCTCGATTCACCGATTGCACTGGTGCGTTGGCCGAAGCGTTGTTGCTTGGGACGGGG
GTACACGAANCGGGTTGGGTGGGCTTGGGCCGGTGGGCTTGCGTTCGGACGGGCGGGGCC
CTTGTCCGAATCTTAATTCTTGGGCAAAAAAAACTTTTTGGGCCCAACCCCTTCCGGGCC
TTGGAAGCCTTCNCCCAGGCGAAAACCAAGCCTTGGGCCGGACTTTGNGGCCCGGAACGA
GTTTATAGGCGCCAAAAAATTCCGGCCTTTGGCTTCGGGTTCCAAATTCACCCACCGGAA
AAAAAAGCCGGCCCTTAGGGGCCCGGGTTCCAAAAACTTAGGCCNTGNGGGACCCAAAAG
GGGCACTTTTGCCGGGAAACCNGGGGAAACCCCCTNTTGAGTTTTGGGAGCTGGCACANA
CAGGCCTTAAACCGGGTTTGGCACCCTTTAAACCCAAGGAAAAT

consensusID : consensus_8311#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence

                              [CAGAATCGNGCACGAGGTGTAGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGGTTGGTTACAACGGTCGTCGTCGTCGTCGTCCCTCCCTCGTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAAGCCAAGCAAGCACCGCCCTAGGCTGGCCGCGCGCGATGTCTGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCATCGATGTGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGGAAGGTGACGACNGTGTGCATGCAAGAAACCTCCGCCAGATTNCGGNACCAAAGCTTTTGAGGCCACACATCNGCCTATGCTCC]

[+] EMBL BX469416             [CAGAATCGNGCACGAGGTGTAGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCGCAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGGTTGGTTACAACGGTCGTCGTCGTCGTCGTCCCTCCCTCGTCCCCAGCGAGCACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAAGCCAAGCAAGCACCGCCCTAGGCTGGCCGCGCGCGATGTCTGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCATCGATGTGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGGAAGGTGACGACNGTGTGCATGCAAGAAACCTCCGCCAGATTNCGGNACCAAAGCTTTTGAGGCCACACATCNGCCTATGCTCC]




>consensus_8311#2
CAGAATCGNGCACGAGGTGTAGCGCGACTCTCCCGATCCTACAGAGCCCAAGCAGAGAAG
GAGATAGAAAAAAAATAGAAGGGCTTCCACCAACCACCCGCCATCTTCATCCGCTCAGCG
CAACAACACAATCGACAGCAGGGAAAAAGCAACAACAAAAACGATAAACCCTCAGCGGTT
TTTTGAGAAAGTTTTGCTTGCTTTTTTGTACGAGCCACCCGAACGAGCAGCGGTTGGTTA
CAACGGTCGTCGTCGTCGTCGTCCCTCCCTCGTCCCCAGCGAGCACACTCGCCAGAATCA
TCCAAAGGGGAGTGCTGCAGATCGTGCGTGCGTGCGCCTGTGTGTGTGTGTGTGCAAGAG
TGCCTGTACAAAATAAAACAACAAGCCAAGCAAGCACCGCCCTAGGCTGGCCGCGCGCGA
TGTCTGGACGAAGGCCAAGATAATGGAGCCAGCCGGAATGGTTCGGTGCCCGAAATAGAG
CTGATAATTAAGGCATCAACCATCGATGTGCAGAAGAAAGGGAGCATGTCTATTTTGTCA
GGAGTACTTCATGGATCTGTATCTGCTGGCAGAGCTAAAGACGATCAGCTTGGAAGGTGA
CGACNGTGTGCATGCAAGAAACCTCCGCCAGATTNCGGNACCAAAGCTTTTGAGGCCACA
CATCNGCCTATGCTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8311#0      CCGCCCACGCGTCCGGAACTGTCAAGAGTGTGTACGCGCGACTCTCCCGATCCTACAGAG 60
consensus_8311#2      -------------CAGAATCGNGCACGAGGTGTA-GCGCGACTCTCCCGATCCTACAGAG 46
consensus_8311#1      ----------GGCAAGAATTGCCCCGAGTGTTTTTTC----TTATGGCGGCGCTAT-GTG 45
                                     ***  *        ** *   *     * *  **   ***  * *

consensus_8311#0      CCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAA-----CCACCCGC 115
consensus_8311#2      CCCAAGCAGAGAAGGAGATAGAAAAAAAATAGAAGGGCTTCCACCAA-----CCACCCGC 101
consensus_8311#1      CCCGTGCGANGCGTGAAGAAGGCTGA--TCTGAAGCGTATCTGCCAAAGCGACCGTGTGC 103
                      ***  **   *   **   **    *     **** *  **  ****     **    **

consensus_8311#0      CATCTTCATCCGCTCAGCGCAACAACACAATCGAC-AGCAGGGAAAAAGCAACAACAAAA 174
consensus_8311#2      CATCTTCATCCGCTCAGCGCAACAACACAATCGAC-AGCAGGGAAAAAGCAACAACAAAA 160
consensus_8311#1      CGCTGTACCTCACCTCGCTCACGAACATGGAGGGTGAGGAAAGCTTCGACGCCAGCTACG 163
                      *    *    * *   ** **  ****     *   ** *  *      *  ** * *  

consensus_8311#0      ACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTT--------GCTTGCTT-TTTTGTAC 225
consensus_8311#2      ACGATAAACCCTCAGCGGTTTTTTGAGAAAGTTTT--------GCTTGCTT-TTTTGTAC 211
consensus_8311#1      TCGGCGAAGCGGCGGAAGTGGTTGCAGGAGTTCATCTGCGACGACGAGCTGATTCTGATC 223
                       **   ** *  * *  **  **  ** *  *  *         *  ***  ** **  *

consensus_8311#0      GAGCCACCCGAACGAGCAGCG-TTGGTTACAACG-TCGTCGTCGTCGTCGTCCCTCCCTC 283
consensus_8311#2      GAGCCACCCGAACGAGCAGCGGTTGGTTACAACGGTCGTCGTCGTCGTCGTCCCTCCCTC 271
consensus_8311#1      CTGTGGCCCGAAAGCCCGACGGCTGCATCCATCATTCTGCGCGGTCCGAACGATTTCTAC 283
                        *   ****** *  *  **  **  * ** *  **  **  ***        * *  *

consensus_8311#0      -TCCCCAGCGAG--CACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGT 340
consensus_8311#2      GTCCCCAGCGAG--CACACTCGCCAGAATCATCCAAAGGGGAGTGCTGCAGATCGTGCGT 329
consensus_8311#1      -TTGCGAACGAGATTGGAGCTGCTCGATTCACCGATTGCACTGGTGCGTTGGCCGAA-GC 341
                       *  * * ****     *   **  ** *** * *  *    *    *  *  **   * 

consensus_8311#0      GCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAA-CCAA 399
consensus_8311#2      GCGTGCGCCTGTGTGTGTGTGTGTGCAAGAGTGCCTGTACAAAATAAAACAACAAGCCAA 389
consensus_8311#1      GTTGTTGCTTGGG-ACGGGGGTACACGAANCGGGTTGGGTGGGCTTGGGCCGGTGGGCTT 400
                      *     ** ** *   * * **   * *    *  **       *    *       *  

consensus_8311#0      CCAA-CACC-CCCTAGCT--GCCGCGCGCGATGTC-GGACGAAGGCCAAGATAATGGAGC 454
consensus_8311#2      GCAAGCACCGCCCTAGGCTGGCCGCGCGCGATGTCTGGACGAAGGCCAAGATAATGGAGC 449
consensus_8311#1      GCGTTCGGACGGGCGGGGCCCTTGTCCG-AATCTTAATTCTTGGGCAAAAAAAACTTTTT 459
                       *   *         *       *  **  ** *     *   *** ** * **      

consensus_8311#0      CAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCAT-CGATG 513
consensus_8311#2      CAGCCGGAATGGTTCGGTGCCCGAAATAGAGCTGATAATTAAGGCATCAACCAT-CGATG 508
consensus_8311#1      GGGCCCAACCCCTTCCGGGCCT----TGGAAGCCTTCNCCCAGGCGAAAACCAAGCCTTG 515
                        ***  *    *** * ***     * **     *     ****   *****  *  **

consensus_8311#0      -GCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTG 572
consensus_8311#2      TGCAGAAGAAAGGGAGCATGTCTATTTTGTCAGGAGTACTTCATGGATCTGTATCTGCTG 568
consensus_8311#1      GGCCGGACTTTGNGGCCCGGAACGAGTTTATAGGCGC-CAAAAAATTCCGGCCTTTGGCT 574
                       ** * *    * *  *  *      **   *** *  *   *     * *  * **   

consensus_8311#0      GCAGAGCTAAAGACGATCAGCTTG-AAGGTGACGACAGTGTGCATGCA-GAAACCTCCGC 630
consensus_8311#2      GCAGAGCTAAAGACGATCAGCTTGGAAGGTGACGACNGTGTGCATGCAAGAAACCTCCGC 628
consensus_8311#1      TCGGGTTCCAAATTCACCCACCGG-AAAAAAAAGCCGGCCCTTAGGGGCCCGGGTTCCAA 633
                       * *     **    * *  *  * **    * * * *     * *         ***  

consensus_8311#0      CAGATTTTCGCACCAA---CTTTGAGGCCACACATCCGCCTATTCTCATAGACAATGGGC 687
consensus_8311#2      CAGATTNCGGNACCAAAGCTTTTGAGGCCACACATCNGCCTATGCTCC------------ 676
consensus_8311#1      AAACTTAGGCCNTGNGGGACCCAAAAGGGGCACTTTTGCCGGGAAACCNGGGGAAACCCC 693
                       *  **                  * *   *** *  ***      *             

consensus_8311#0      TTGCCATACTGGAAAACGAGAAGATCGAGCGGCACATCATGAAATCGGTGCCCGGTGGAT 747
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      CTNTTGAGTTTTGGGAGCTGGCACANACAGGCCTTAAACCGGGTTTGGCACCCTTTAAAC 753
                                                                                  

consensus_8311#0      ACAATCTTTTCGTGCAGGACAAAGAGGTGGCCACGCTGATAGAAAATCTGTACTCGAAGC 807
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      CCAAGGAAAAT------------------------------------------------- 764
                                                                                  

consensus_8311#0      TAAAGCTGATGCTGGTGAAAAAGGACGAGAACAAGAACAACGCGCTGCTGGTGCATCTGC 867
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      AAAAGATCAACGATCATCTGGCGGCCCGCGGCACCCGCTTCCTCACCGGCGACACGATGT 927
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      GCTGCTTCGACTGTGAGCTGATGCCGCGCCTGCAGCACATCAGAGTGGCCGGCAAATACT 987
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      TCGTTGACTTCGATATACCAAAACATTTAACGGCGTTGTGGCGGTACATGTACCATATGT 1047
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      ATCAGCTAGACGCGTTCACGCAGTCCTGTCCAGCCGATCAGGATATCATCAACCATTACA 1107
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      AACTGCAGCAGATGCTGAAAATGAAAAAGCACGAAGAACTGGAGACGCCAACTTTCACCA 1167
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      CATCGATTCCCGTTGATTTGAACGAGCAGTAAGTGCGCTACTATTTAGGTTGGACCGCGC 1227
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      TACAAACGGCGGTGAAAAAACAGCAACAGTGAAAACGAAAAAAAAATCCATGCAACAATA 1287
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      TAAAAAAAAAACAGAACACCACACAAAATTGTAGCAGTAGAAAAGAGGGTAGGAATTACG 1347
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      AATAGTTTTAGACGAATGATTCCAAAGTCTACTATCTACCAGCATGATGCACTGGTGGGG 1407
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      CATCGATTTTGAATCACGTCCAGCGGGAGAGAAACACAATCAACACACATTGAACCACCA 1467
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      CAACTTCTTTCCGCTTCAATTACGCTAATTGTTTTTGTCTTTCTTATTTTTGAGTAATCT 1527
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      TATCACTTCACGTCGCTTTTTAGAANGAGATTTTTTGTGTTTCGATGTATCGTGTACAGC 1587
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      TTGTGAAACTTGTACTTGTTCTANGTGGGACCGAGCGGGTCCNGCTTATCTATTTTCTAC 1647
consensus_8311#2      ------------------------------------------------------------
consensus_8311#1      ------------------------------------------------------------
                                                                                  

consensus_8311#0      A 1648
consensus_8311#2      -
consensus_8311#1      -