cluster # 8330

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8330 cluster # 8330 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8330#0 length = 1754 sequences # 8

consensus_8330#1 length = 692 sequences # 1
consensus_8330#2 length = 679 sequences # 1

consensusID : consensus_8330#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1754
fasta sequence

                              [CCGATCGGATGCCGCTGCTGGCGAATACTCAAGCGCAACCGAAACACTGGAAACGGCGATCTCGCTTATCAAACAGTCCAAGGTGGCTCAAGACGAACGGTGTAAGATTTTGATTGTCTCGCTGCAAGACACGCTGCACGGCATCGAGGCGAAGAGCTACACCCGGCGAGAGCGTTCCCGATCGCGCGAACGCTCGCACAGACGCCAGCGCCGGGAGCGGTCAACGTCACGCTACCGGGAACGTTCGCGCGATCGCGAGCGGGAGCGTGAGCGTGATCGGGATCGCGACCGTGAACGTGATGGCTCTCGCCGATCTCGCCCAAGGAAATCTCCGGAACCGGCCACTGATAATGCAACGGATAGCTCGTCGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGAGCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAAATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTCAAAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTTGACAGTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG-------AATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCG-TTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGT---AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAATCATCAGCGGCAAGCGG-GTAATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTAACGCACGACTCGACGATGACGACGCTACTGATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGAGAGAAAAAAAATCAAAAAAAGAAAAAAAAA]

[+] EMBL BM599117             [CCGATCGGATGCCGCTGCTGGCGAATACTCAAGCGCAACCGAAACACTGGAAACGGCGATCTCGCTTATCAAACAGTCCAAGGTGGCTCAAGACGAACGGTGTAAGATTTTGATTGTCTCGCTGCAAGACACGCTGCACGGCATCGAGGCGAAGAGCTACACCCGGCGAGAGCGTTCCCGATCGCGCGAACGCTCGCACAGACGCCAGCGCCGGGAGCGGTCAACGTCACGCTACCGGGAACGTTCGCGCGATCGCGAGCGGGAGCGTGAGCGTGATCGGGATCGCGACCGTGAACGTGATGGCTCTCGCCGATCTCGCCCAAGGAAATCTCCGGAACCGGCCACTGATAATGCAACGGATAGCTCGTCGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGAGCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAAATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTCAAAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTTGACAGTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM577873             [                                                                                                                                                                                                                                                                                                       ccgGATGGCTCTCGCCGATCTCGCCCAAGGAAATCTCCGGAACCGGCCACTGATAATGCAACGGATAGCTCGTCGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGAGCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAAATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTCAAAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTTGACAGTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG       AATGTATCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM651068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGTGAAACAAAATGAACTACACACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG       AATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08LZ6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTG AACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG       AATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCG TTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAATCATCAGCGGCAAGCGG GTAATGCTGGAGGAGGCCACGTGTTACTGTGACAGTTACGCACGACTCGACGATGACGACGCTACTGATCCGCAAAGAAGATTGTAACACATCC                                                                  ]
[+] EMBL CNS08O06             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG       AATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGGGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTATTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCG TTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGT   AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAATCATCAGCGGCAAGCGGAGTAATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTAACGCACGACTCGACGATGACGACGCTACTCATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGAGAGAAAAAAAATCAAAAAAAGAAAAAAAAA]
[-] EMBL CNS08O07             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCCCGTTGGACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG       AATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGGGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTAAACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATTATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAAAAGTGTTGTGTGCAAGAATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTTAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCGCTTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGAATCAGCATTGACAACGCAACCACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGT   AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAATCATCAGCGGCAAGCGG GTAATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTGACGCACGACTCGACGATGACGACGCTACTGATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGAGAG                           ]
[-] EMBL CNS08LZ7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTTCCCCCTGATCTCG TGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAG       AATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATTATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCATTGCGGGTCGTGTGCG TTCCGTGTGTACATCCTGC                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX615299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACTTACAAAAGCGCCGCCGTATCGTCTCTTTGTATGCAAAGTGTTTAGACGGAGTATAAACAATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGTAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGACATGGTGACAAAGATTTAAG  GCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAATCACACATCCATCCCGCTCTACTATTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGAGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCATGAAGACTCCTTGCGGTTCGTGTGCG TTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACCTCCCGGCGGCAGTAGTTTCCT                                                                                                                                                                                                                                                                     ]




>consensus_8330#0
CCGATCGGATGCCGCTGCTGGCGAATACTCAAGCGCAACCGAAACACTGGAAACGGCGAT
CTCGCTTATCAAACAGTCCAAGGTGGCTCAAGACGAACGGTGTAAGATTTTGATTGTCTC
GCTGCAAGACACGCTGCACGGCATCGAGGCGAAGAGCTACACCCGGCGAGAGCGTTCCCG
ATCGCGCGAACGCTCGCACAGACGCCAGCGCCGGGAGCGGTCAACGTCACGCTACCGGGA
ACGTTCGCGCGATCGCGAGCGGGAGCGTGAGCGTGATCGGGATCGCGACCGTGAACGTGA
TGGCTCTCGCCGATCTCGCCCAAGGAAATCTCCGGAACCGGCCACTGATAATGCAACGGA
TAGCTCGTCGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGA
GCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAA
ATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTCAAAAT
TCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTTGACA
GTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACACACAC
GGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTATCGAT
GTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGTTTCTA
TTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCAT
TGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCC
TGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAG
ACGGAGAATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATG
AGACGTGGGAAGCATCTGAGAGCATAATAATACGCCACATAGCTAAATGTAACGCAGAGA
AGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGA
AGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTT
CCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACA
ACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTCA
GTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCGTTCCGTGT
GTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGC
AGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGAT
GGCAGCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTAGCAGCAGCAGTAATCATCAGCGGCAAGCGGGTAATGCTGGAGGAGGCCACGTGTTG
CTGTGACAGTAACGCACGACTCGACGATGACGACGCTACTGATCCGCAAAGAAGATTGTA
ACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGAGAGAAAAAAAATCAAA
AAAAGAAAAAAAAA

consensusID : consensus_8330#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence

                              [CCGAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCGTTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAATCATCAGCGGCAAGCGGGTAATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTGACGCACGACTCGACGATGGCGACGCTACTGATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGAGAGAAAAAAAATC]

[+] EMBL BM630519             [CCGAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTGTGCGTTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAATCATCAGCGGCAAGCGGGTAATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTGACGCACGACTCGACGATGGCGACGCTACTGATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGAGAGAAAAAAAATC]




>consensus_8330#1
CCGAGCTAAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTT
AAGGCGCGCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGC
TCTACTACTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGG
AATGACAATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTG
TGTGTGTGAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCT
TGCGGGTCGTGTGCGTTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAG
TGGGTGCATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTT
CCCGGCGGCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAATCATCAGC
GGCAAGCGGGTAATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTGACGCACGACTCGAC
GATGGCGACGCTACTGATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAAT
AATTATAAACGTAATCAGAGAGAAAAAAAATC

consensusID : consensus_8330#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence

                              [CCGCGGACGCGTGGGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGAGCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAAATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTCAAAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTTGACAGTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAGAATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGGAAGC]

[+] EMBL BM627293             [CCGCGGACGCGTGGGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGAGCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAAATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTCAAAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTTGACAGTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGTTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAGTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTTCCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTGTTTAGACGGAGAATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCAAAATGAGACGTGGGGAAGC]




>consensus_8330#2
CCGCGGACGCGTGGGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAG
CGGGAGCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTG
CTAAAATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGAACTAGCTGGTTGCCTC
AAAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTT
TGACAGTTCAGTTCCCATTTCCATGGAGAGAAGTTAATGTGAAACAAAATGAACTACACA
CACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGTA
TCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGGT
TTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAAG
TTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGTTT
CCCCCTGATCTCGTTGCACTTACAAAAGCGCCGCCGTATCGTCTCTCTGTATGCAAAGTG
TTTAGACGGAGAATGTATCTTCTTTTTTTAAATTCCATTTGCACTATAACTATTCTACCA
AAATGAGACGTGGGGAAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8330#0      CCGATCGGATGCCGCTGCTGGCGAATACTCAAGCGCAACCGAAACACTGGAAACGGCGAT 60
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      CTCGCTTATCAAACAGTCCAAGGTGGCTCAAGACGAACGGTGTAAGATTTTGATTGTCTC 120
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      GCTGCAAGACACGCTGCACGGCATCGAGGCGAAGAGCTACACCCGGCGAGAGCGTTCCCG 180
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      ATCGCGCGAACGCTCGCACAGACGCCAGCGCCGGGAGCGGTCAACGTCACGCTACCGGGA 240
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      ACGTTCGCGCGATCGCGAGCGGGAGCGTGAGCGTGATCGGGATCGCGACCGTGAACGTGA 300
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      TGGCTCTCGCCGATCTCGCCCAAGGAAATCTCCGGAACCGGCCACTGATAATGCAACGGA 360
consensus_8330#2      -----------------------------------------------------CCGCGGA 7
consensus_8330#1      ---------------------------------CCGAGCTAAATGTAACGCAGAGAAGGA 27
                                                                               ***

consensus_8330#0      TAGCTCGTCGAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGA 420
consensus_8330#2      CGCGTGG--GAAACGGTACTACAACGACGATCGCTACCGTTCGTCGGATCGTGAGCGGGA 65
consensus_8330#1      CGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGCGCAACGG---CAAAGAGGAA 84
                          * *  *    ** *     ** * ***      **  *  ***      ** ** *

consensus_8330#0      GCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAA 480
consensus_8330#2      GCGCGATCGCGACCGCGAGCGCCGTGAAGATCATCGATCACGGCATTAAGTAGTGCTAAA 125
consensus_8330#1      GCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTAC-TAGCAGAGTACACTT 143
                      **   *         * * *  *      ***       **  * *     *** *    

consensus_8330#0      ATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGA--ACTAGCTGGTT--GCCTCA 536
consensus_8330#2      ATGAACCCTTATATTTTCGAACGCTACTAGCAAAACGGA--ACTAGCTGGTT--GCCTCA 181
consensus_8330#1      CCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACAATCTGGTGCAGCGACA 203
                         * *  *    **     * ** *  ***** * * *  ** * *****   **  **

consensus_8330#0      AAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTT 596
consensus_8330#2      AAATTCCTGCAACGCTACACTACAATTGAATTCTAAAGTTTTTGGGCAATTGTCTTTTTT 241
consensus_8330#1      ACAGTGTTGTG-TGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGTGAGTGTTGTTCCGTC 262
                      * * *  **    ** *   * *    *  *  *   ** * ** *    *   *   * 

consensus_8330#0      GACAGTTCAGTTCCCATTTCCA--TGGAGAGAAGTTAATGTGAAACAAAATGAACTACAC 654
consensus_8330#2      GACAGTTCAGTTCCCATTTCCA--TGGAGAGAAGTTAATGTGAAACAAAATGAACTACAC 299
consensus_8330#1      AGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGTCGTG-TGCGTTCCGT 321
                          *** *     *  ** **  *   **  * *   ** *   *    **   * *  

consensus_8330#0      ACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGT 714
consensus_8330#2      ACACACGGTCCGCAGCCCGATCCTTTTGTCCCGTAATACTTCCCCCAGTTTTATATATGT 359
consensus_8330#1      GTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGCATCTTGA---ACGG 378
                          **   * **  *          ** **      * *     **  ** *   * * 

consensus_8330#0      ATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGG 774
consensus_8330#2      ATCGATGTTTCCCCACATCTCGCCCAAAGTTTTTGAAGGTAGTTTAAATTGAAGTTTTGG 419
consensus_8330#1      TCAGCAGACTCAGCATTGACAACGCAACGACTCCCA--GCACTTCC--CGGCGGCAGTAG 434
                         *  *  **  **       * *** *  *   *  * * **      *  *   * *

consensus_8330#0      TTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAA 834
consensus_8330#2      TTTCTATTTTGTATAAAATTAGTGCAAAAGTCGTTCCAAACATGGAGCAAAATGTAGTAA 479
consensus_8330#1      TTTCCTGATGGCA-GCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCAGCAGCAGCAGCAG 493
                      ****    * * *   *      ***  **  * *  *      *    *   * ** * 

consensus_8330#0      GTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGT- 893
consensus_8330#2      GTTCATTGTGAAACAAGAATATCTCATATACACGTTTTAATTGCACGACGCTCTCGAGT- 538
consensus_8330#1      CAGCAGCA-GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAATCATCAGCGGCAAGCGGGTA 552
                         **    * * **  *  * *      *   *   ****     *  **   ** ** 

consensus_8330#0      -TTCCCCCTGATCTCGT-TGCACTTACAAAAGCGCCGC-CGTATCGTCTCTCTGTATGCA 950
consensus_8330#2      -TTCCCCCTGATCTCGT-TGCACTTACAAAAGCGCCGC-CGTATCGTCTCTCTGTATGCA 595
consensus_8330#1      ATGCTGGAGGAGGCCACGTGTTGCTGTGACAGTGACGCACGACTCGACGATGGCGACGCT 612
                       * *     **   *   **    *   * ** * *** **  *** *  *    * ** 

consensus_8330#0      AAGTGTTTA-GACGGAGAATGTATC----TTCTTTTTTTAAATTCCATTTGCACTATAAC 1005
consensus_8330#2      AAGTGTTTA-GACGGAGAATGTATC----TTCTTTTTTTAAATTCCATTTGCACTATAAC 650
consensus_8330#1      ACTGATCCGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGT 672
                      *    *     * * *** **** *      ** ***** ** ** **    *  *    

consensus_8330#0      TATTCTACCAAAATGAGACGTGGG-AAGCATCTGAGAGCATAATAATACGCCACATAGCT 1064
consensus_8330#2      TATTCTACCAAAATGAGACGTGGGGAAGC------------------------------- 679
consensus_8330#1      AATCAGAGAGAAAAAAAATC---------------------------------------- 692
                       **   *   ***  * *                                          

consensus_8330#0      AAATGTAACGCAGAGAAGGACGCATCGGAGCGCAGGCATGGTGACAAAGATTTAAGGCGC 1124
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      GCAACGGCAAAGAGGAAGCATCAATATATATTCAAACTACACATCCATCCCGCTCTACTA 1184
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      CTAGCAGAGTACACTTCCCATCATTGGCGTTCCTCTAAGCAAGCAGCAACAGGAATGACA 1244
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      ATCTGGTGCAGCGACAACAGTGTTGTGTGCAAGCATGCGCGCGTGTGTTTGTGTGTGTGT 1304
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      GAGTGTTGTTCCGTCAGTGGTTTAAAGATCTGTTACAACTCCTGAAGACTCCTTGCGGGT 1364
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      CGTGTGCGTTCCGTGTGTACATCCTGCTACGTACGATCCATGCCCGACGGCAGTGGGTGC 1424
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      ATCTTGAACGGTCAGCAGACTCAGCATTGACAACGCAACGACTCCCAGCACTTCCCGGCG 1484
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      GCAGTAGTTTCCTGATGGCAGCAGCAGCGGCAGCAGCAGCTGTAGCAGCAGCAGCAGCAG 1544
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      CAGCAGCAGCAGCAGCAGTAGCAGCAGCAGTAATCATCAGCGGCAAGCGGGTAATGCTGG 1604
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      AGGAGGCCACGTGTTGCTGTGACAGTAACGCACGACTCGACGATGACGACGCTACTGATC 1664
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      CGCAAAGAAGATTGTAACACATCCCTCTTTTTGAAGTCAATAATTATAAACGTAATCAGA 1724
consensus_8330#2      ------------------------------------------------------------
consensus_8330#1      ------------------------------------------------------------
                                                                                  

consensus_8330#0      GAGAAAAAAAATCAAAAAAAGAAAAAAAAA 1754
consensus_8330#2      ------------------------------
consensus_8330#1      ------------------------------