cluster # 8332

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Anopheles gambiae
cluster # 8332 cluster # 8332 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8332#0 length = 966 sequences # 9

consensus_8332#1 length = 184 sequences # 1

consensusID : consensus_8332#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 966
fasta sequence

                              [ACCTTTTTCCCGCAAGCACAAGAAGAGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTACCAGTATTGCAA-TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG-GGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCAGGTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACT-GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTCGTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCATCTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGATTAAGGATAGTGTATTGGATTAAGAAATTAGTTAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAATATTTGTTTTTCCACATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCACATGGGCCCT]

[-] EMBL CNS095G4             [ACCTTTTTCCCGCAAGCACAAGAAGAGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTACCAGTATTGCAA TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGAAAAGCTAACTAAAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG GGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCAGGTTTGCTTCACCCCCGAGCTGCACCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGTTGGCGTCCAGCAACT GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTT ATGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCCCGAGCCCCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCATCTTTTATGCTGTATTAATATGTCACCCCC                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS097K4             [                         AGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTACCAGTATTGCAA TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG GGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCA GTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACT GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGCCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTCGTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCATCTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGATTAAGGATAGTGTATTGGATTAAGAAATTAGTTAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAATATTTGTTTTTCCACATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCACATGGGCCCT]
[+] EMBL CNS09KZ2             [                         AGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTACCAGTATTGCAA TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG GGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCA GTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACT GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTCGTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCATCTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGGACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGATTAAGGATAGTGTATTGGATTAAGAAATTAGTTAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAATATTTG TTTTCCACATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAca                   ]
[+] EMBL CNS099TT             [                         AGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTACCAGTATTGCAA TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG GGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCAGGTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACTGGGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGTCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS095G3             [                          GGAGGGC AAATATGTTTCTCTGAGTAGAGTTACCAGTATTGCAA TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTGAGGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCA GTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACT GGGACCGTAATGTGATTCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTCGTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCATCTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGATTAAGGATAGTGTATTGGATTAAGAAATAAGTAAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAATATTTGTTTTTCCACATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAc                   ]
[+] EMBL CNS09LBB             [                                                GAGTAGAGTTACCAGTATTGCAACAAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09KZ3             [                                                        TTACCAGTATTGCAA TAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG GGATTGATGTGGACGTGCATGACGCTGTACAACCGGCCGCAGGTTTGCTTAACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACT GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTTGTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCATCTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGGACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGATTAAGGATAGTGTATTGGATTAAGAAATTAGTTAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAATATTTGTTTTTCCAAATCCTAAAAttaa                                       ]
[+] EMBL BX612880             [                                                                                                                      ACTACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATGCCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTG GGATTGATGTGGACGTGTATGACGCTGTACAACCGGCCGCAGGTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTGATCGCGTTGATATGCATTTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTGGCGTCCAGCAACT GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCAATGGTGCTGTTCTGTCTTGCGGCCGTCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTCGTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCGCAGTTTTAAAGGCC    CCGTTC  G   AG  CCGGAGCACATATCGATGTATCTCAACGTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAACGTTTCTGAACAATTGATGGTACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACT   AAAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGAT                                                                                                                                                   ]
[-] EMBL CNS097K5             [                                                                                                                                                                                                                                                                                                           CTGATCGCGTTTATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCAAACGGCTGGCGTCCAGCAACT GGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTAACTGAAATGGTGCTGTTTTTTTTTGCGGCAGCCATATTTCCGCTCGGATTCCATGTGGACGAGATCGGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATTTCGTACATCATGTTCGTGCTGGCCCTGTGGATAACGGTCATATCGGAG                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_8332#0
ACCTTTTTCCCGCAAGCACAAGAAGAGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTAC
CAGTATTGCAATAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACT
ACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATG
CCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTGGGATTGATGTGGACGTGC
ATGACGCTGTACAACCGGCCGCAGGTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTG
ATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTG
GCGTCCAGCAACTGGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCA
ATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATC
GGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTC
GTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCG
CAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCAT
CTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGC
GTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAA
AAAAACCAAAAGATACAAATTGTACTTTGCTGTAGCGATTAAGGATAGTGTATTGGATTA
AGAAATTAGTTAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAAT
ATTTGTTTTTCCACATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCACATG
GGCCCT

consensusID : consensus_8332#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 184
fasta sequence

                              [TATCTCATTTTTTATGCTGTATTAATATGTCACCCCCCCCCCCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTGAGCGATTAAAAAAAAAAAAAAA]

[-] EMBL CNS099TU             [TATCTCATTTTTTATGCTGTATTAATATGTCACCCCCCCCCCCCACATTTACGCCCCAGTGCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTGAGCGATTAAAAAAAAAAAAAAA]




>consensus_8332#1
TATCTCATTTTTTATGCTGTATTAATATGTCACCCCCCCCCCCCACATTTACGCCCCAGT
GCTGTAGCGTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACA
AACTAAAAAAAAACCAAAAGATACAAATTGTACTTTGCTGTGAGCGATTAAAAAAAAAAA
AAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8332#0      ACCTTTTTCCCGCAAGCACAAGAAGAGGAGGGCAAAATATGTTTCTCTGAGTAGAGTTAC 60
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      CAGTATTGCAATAAACAGGACGTTTTTGTGAAATACACCCCTAAAATGGACAAGCTAACT 120
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      ACAATCAGCGCTGGGCTGTTTATGGCGGCGGATGTGTGTGCGATCGTTAGTTTGGCCATG 180
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      CCCGATTGGATTGTGACCAGTGTTGGAGGTGAAACGCGGCTGGGATTGATGTGGACGTGC 240
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      ATGACGCTGTACAACCGGCCGCAGGTTTGCTTCACACCCGAGCTGCAGCCGGAGTGGCTG 300
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      ATCGCGTTGATATGCATCTTCGTGGGTTGCATCTGCATTACCACCACCATCATACTGCTG 360
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      GCGTCCAGCAACTGGGACCGTAATGTGATCCCTTATGCCCGGTGGGTCGGCTTTACTGCA 420
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      ATGGTGCTGTTCTGTCTTGCGGCAGTCATATTTCCGCTCGGATTCCATGTGGACGAGATC 480
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      GGTGGCCAACCGTACCATCTGCCCCATTCGCACCAGGTCGGCATATCGTACATCATGTTC 540
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      GTGCTGGCCCTGTGGATCACGGTCATATCGGAGCTGTTTGCGGAGAAGGTGTGCCTGCCG 600
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      CAGTTTTAAAGGCCCGAGCCGCCCCGGAACAGCTCCGGCGCACATATCGATGTATCTCAT 660
consensus_8332#1      ----------------------------------------------------TATCTCAT 8
                                                                          ********

consensus_8332#0      CTTTTATGCTGTATTAATATGTCACCCCCTCCCTCCACATTTACGCCCCAGTGCTGTAGC 720
consensus_8332#1      TTTTTATGCTGTATTAATATGTCACCCCCCCCCCCCACATTTACGCCCCAGTGCTGTAGC 68
                       **************************** *** **************************

consensus_8332#0      GTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAA 780
consensus_8332#1      GTTTCTGAACAATTGATGATACTTCTTGCTTTCCTAGTGATGGAATTGAACAAACTAAAA 128
                      ************************************************************

consensus_8332#0      AAAAACCAAAAGATACAAATTGTACTTTGCTGT-AGCGATTAAGGATAGTGTATTGGATT 839
consensus_8332#1      AAAAACCAAAAGATACAAATTGTACTTTGCTGTGAGCGATTAAAAAAAAAAAAAAA---- 184
                      ********************************* *********  * *    *       

consensus_8332#0      AAGAAATTAGTTAATAATTTCCATTATTTTGTATTGGTGAGAAATAAATTTGCTGTGCAA 899
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      TATTTGTTTTTCCACATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCACAT 959
consensus_8332#1      ------------------------------------------------------------
                                                                                  

consensus_8332#0      GGGCCCT 966
consensus_8332#1      -------