cluster # 8340

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Anopheles gambiae
cluster # 8340 cluster # 8340 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8340#0 length = 726 sequences # 6
consensus_8340#1 length = 685 sequences # 1

consensus_8340#2 length = 593 sequences # 1
consensus_8340#3 length = 582 sequences # 1
consensus_8340#4 length = 468 sequences # 1

consensusID : consensus_8340#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 726
fasta sequence

                              [CCTACTGGGACTAACGATCGTTATCGACCGATACTGCTCTGCGCGAGTGTCTGTGCACTGTGTACTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCGG----AAA-AATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAAATGAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCCGCCGGCC]

[+] EMBL CNS092DU             [CCTACTGGGACTAACGATCGTTATCGACCGATACTGCTCTGCGCGAGTGTCTGTGCACTGTGTACTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCGG    AAA AATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCATCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACANNTGAnnnaaa                                    ]
[+] EMBL BX617065             [                                                       CACTGTGTACTCTTGCCCATTCGCTGTT  CATACGAAGTGCTTCTCCAGGGCCGAAACAAACCGGGAAAAAACAATGGCAACCACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCGCCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGCGGAAGGCGATGGGTAAACGTTTGGACAGCACATTTTGGAATCT ACTTTTTAACAGGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACTGGTGGT                                                     ]
[+] EMBL CNS08JDG             [                                                                CTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCGG    AAA AATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAAATGAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCCGCCGGCC]
[-] EMBL CNS092DV             [                                                                                                CTTCTCCAGGGCCGAAACAAACCGG    AAA AATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATTTTTGTCGGCCGGGCACACCATGCCGGGGATTTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATTTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCATCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATTTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATTTAATTTTTTAACATGGCAGTTAATAAGCTACAACCCCGGACTGACTG                                                                    ]
[-] EMBL CNS09S4C             [                                                                                                    TCCAGGGCCGAAACAAACCGG    AAA AATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATTTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAAATTAAAAAAAAAAAAAAAAAaaaaaaaaa                 ]
[+] EMBL BM640741             [                                                                                                               ccgAAACCGG    AAA AATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTACTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCAGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAAGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTAC                                                ]




>consensus_8340#0
CCTACTGGGACTAACGATCGTTATCGACCGATACTGCTCTGCGCGAGTGTCTGTGCACTG
TGTACTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCG
GAAAAATGGCAACGACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCGCACATGG
TGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCG
GGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTG
GCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATA
CGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGG
AGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGT
GCTCGCACAACTGCATCTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATG
AGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCAC
ATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAA
GGCCACAGGTGGTGGTACAAATGAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCCG
CCGGCC

consensusID : consensus_8340#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence

                              [GAATTGCAGAGGTGTACTCTTGCCCATTCGCTGTTCATACGAAGTGCTTCTCCAGGGCCGAAACAAACCGGGAAAAAACAATGGCAACCACATGGTCTCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCATGTTCGTCGGTGGCCACAACAGTCCAGATGGGGAGATACTGTACGTTGGCCGCCAGCCTACACGAGGGCGAATCGCCAAACGATCGGGCACACGGTGCAAGATGCTCGACACAAAATGCATCTACATACCCGTTAACAGGGTGGTAGCGGGCACAGTGTCCGTACCCTACCTATGAGGTGCCTTGTGCCGAGCCGATTAAAAACCACCCAACGCCGCCAACGGGCCNAATGGCNGGTAAACCGTTTGGGACACACGGCACACACTTTTTCGGGAATTCTCACTTTATTTCACCCAAGGGGCCAGCTTACTAAATGCGCTTACAAACCAACTGGAACTT]

[+] EMBL AL696597             [GAATTGCAGAGGTGTACTCTTGCCCATTCGCTGTTCATACGAAGTGCTTCTCCAGGGCCGAAACAAACCGGGAAAAAACAATGGCAACCACATGGTCTCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCATGTTCGTCGGTGGCCACAACAGTCCAGATGGGGAGATACTGTACGTTGGCCGCCAGCCTACACGAGGGCGAATCGCCAAACGATCGGGCACACGGTGCAAGATGCTCGACACAAAATGCATCTACATACCCGTTAACAGGGTGGTAGCGGGCACAGTGTCCGTACCCTACCTATGAGGTGCCTTGTGCCGAGCCGATTAAAAACCACCCAACGCCGCCAACGGGCCNAATGGCNGGTAAACCGTTTGGGACACACGGCACACACTTTTTCGGGAATTCTCACTTTATTTCACCCAAGGGGCCAGCTTACTAAATGCGCTTACAAACCAACTGGAACTT]




>consensus_8340#1
GAATTGCAGAGGTGTACTCTTGCCCATTCGCTGTTCATACGAAGTGCTTCTCCAGGGCCG
AAACAAACCGGGAAAAAACAATGGCAACCACATGGTCTCCCGACCAGCGTGCATGGACCG
TACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGC
CGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCGCGT
ACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGC
AGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCATGTTCGTCGGTGG
CCACAACAGTCCAGATGGGGAGATACTGTACGTTGGCCGCCAGCCTACACGAGGGCGAAT
CGCCAAACGATCGGGCACACGGTGCAAGATGCTCGACACAAAATGCATCTACATACCCGT
TAACAGGGTGGTAGCGGGCACAGTGTCCGTACCCTACCTATGAGGTGCCTTGTGCCGAGC
CGATTAAAAACCACCCAACGCCGCCAACGGGCCNAATGGCNGGTAAACCGTTTGGGACAC
ACGGCACACACTTTTTCGGGAATTCTCACTTTATTTCACCCAAGGGGCCAGCTTACTAAA
TGCGCTTACAAACCAACTGGAACTT

consensusID : consensus_8340#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence

                              [ACCCACGCGTCCGCGACCGATACTGCCCTTAGCGAGTGTCTGTGCACTGTGTACTCTTGCCCATTCGCTGTTCATACGAAGTGCTTCTCCAGGGCCGAAACAAACCGGGAAAAAACAATGGCAACCACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCGCCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGCGGAAGGCGATGGGTAAACGTTTGGACAGCACA]

[+] EMBL BM585957             [ACCCACGCGTCCGCGACCGATACTGCCCTTAGCGAGTGTCTGTGCACTGTGTACTCTTGCCCATTCGCTGTTCATACGAAGTGCTTCTCCAGGGCCGAAACAAACCGGGAAAAAACAATGGCAACCACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCGCCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGCGGAAGGCGATGGGTAAACGTTTGGACAGCACA]




>consensus_8340#2
ACCCACGCGTCCGCGACCGATACTGCCCTTAGCGAGTGTCTGTGCACTGTGTACTCTTGC
CCATTCGCTGTTCATACGAAGTGCTTCTCCAGGGCCGAAACAAACCGGGAAAAAACAATG
GCAACCACATGGATCCCGACCAGCGTGCATGGACCGTACCCACCCCACATGGTGCCGGGC
GGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTG
CTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAG
ACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCG
GCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTG
TACGTTGGCCGCGCCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCAC
AACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTG
TGCGAGCGATAAAACACAAGCGGAAGGCGATGGGTAAACGTTTGGACAGCACA

consensusID : consensus_8340#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 582
fasta sequence

                              [CTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCGGAAAAATGGCAACGACATGGATCCCGACCGGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCC]

[+] EMBL CNS08L8P             [CTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCGGAAAAATGGCAACGACATGGATCCCGACCGGCGTGCATGGACCGTACCCACCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCC]




>consensus_8340#3
CTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCGGAAA
AATGGCAACGACATGGATCCCGACCGGCGTGCATGGACCGTACCCACCGCACATGGTGCC
GGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGGGA
TCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGTACGGTGGCCA
GGAGACGCTGGTCGAGCACGTCCGATGGGGAGATACTGTACGTTGGCCGCACCTACCACG
AGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACG
GGGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGTG
GAAGGCAATGGGTAATCGTTGGGACAGCACATTTTGGAATCTAATTTTTTAACATGGCAG
TTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAAATGAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCC

consensusID : consensus_8340#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 468
fasta sequence

                              [CGACCCACGCGTCCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGTGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACTGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCGCCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGCGGAAGGCGATGGGTAAACGTTGGGACAGCACATTTTGGAATCTACTTTTTAACATGG]

[+] EMBL BM632614             [CGACCCACGCGTCCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACCATGCCGGTGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACTGCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCGCCTACCACGAGGGATCGCAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCGGAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGCGGAAGGCGATGGGTAAACGTTGGGACAGCACATTTTGGAATCTACTTTTTAACATGG]




>consensus_8340#4
CGACCCACGCGTCCGCACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTC
GTCGGCCGGGCACACCATGCCGGTGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACT
GCCGCGTACGTTGCGTACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTC
CACAAGCAGCTGATCTGGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTC
GGTGGCCACACGTCCGATGGGGAGATACTGTACGTTGGCCGCGCCTACCACGAGGGATCG
CAAACGATCGGCAAGGTGCAGTGCTCGCACAACTGCATCTACATCCCGTACGGTGGTGCG
GAAGTGTCCGTCCCTACCTATGAGGTGCTGTGCGAGCGATAAAACACAAGCGGAAGGCGA
TGGGTAAACGTTGGGACAGCACATTTTGGAATCTACTTTTTAACATGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8340#1      --------------------------------------------GAATTGCAGAG----G 12
consensus_8340#2      -----------ACCCACGCGTCCGCGACCGATACTGCCCTTAGCGAGTGTCTGTGCACTG 49
consensus_8340#4      ------------------------------------------------------------
consensus_8340#0      CCTACTGGGACTAACGATCGTTATCGACCGATACTGCTCTGCGCGAGTGTCTGTGCACTG 60
consensus_8340#3      ------------------------------------------------------------
                                                                                  

consensus_8340#1      TGTACTCTTGCCCATTCGCTGTTC--ATACGAAGTGCTTCTCCAGGGCCGAAACAAACCG 70
consensus_8340#2      TGTACTCTTGCCCATTCGCTGTTC--ATACGAAGTGCTTCTCCAGGGCCGAAACAAACCG 107
consensus_8340#4      ------------------------------------------------------------
consensus_8340#0      TGTACTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCG 120
consensus_8340#3      ----CTCTTGCCCGTTCGCTGTTCGCATACGAGGTGCTTCTCCAGGGCCGAAACAAACCG 56
                                                                                  

consensus_8340#1      GGAAAAAACAATGGCAACCACATGGTCTCCCGACCAGCGTGCATGGACCGTACCCACCCC 130
consensus_8340#2      GGAAAAAACAATGGCAACCACATGGA-TCCCGACCAGCGTGCATGGACCGTACCCACCCC 166
consensus_8340#4      -------------------------------------------CGACCCACGCGT-CCGC 16
consensus_8340#0      GAAAA-----ATGGCAACGACATGGA-TCCCGACCAGCGTGCATGGACCGTACCCACCGC 174
consensus_8340#3      GAAAA-----ATGGCAACGACATGGA-TCCCGACCGGCGTGCATGGACCGTACCCACCGC 110
                                                                  *  **   *   ** *

consensus_8340#1      ACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACC 190
consensus_8340#2      ACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACC 226
consensus_8340#4      ACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACC 76
consensus_8340#0      ACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACC 234
consensus_8340#3      ACATGGTGCCGGGCGGTGTGGACAGTGACGGTGCGCAGATCTTCGTCGGCCGGGCACACC 170
                      ************************************************************

consensus_8340#1      ATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGC-GCGTACGTTGCGT 249
consensus_8340#2      ATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGT 286
consensus_8340#4      ATGCCGGTGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACTGCCGCGTACGTTGCGT 136
consensus_8340#0      ATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGT 294
consensus_8340#3      ATGCCGGGGATCTGCTGCCCGCGAAAGTGATTCCGGACAAGACCGCCGCGTACGTTGCGT 230
                      ******* *********************************** ** *************

consensus_8340#1      ACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCT 309
consensus_8340#2      ACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCT 346
consensus_8340#4      ACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCT 196
consensus_8340#0      ACGGTGGCCAGGAGACGCTGGTCGAGCACGTGGAGGTGCTGGTCCACAAGCAGCTGATCT 354
consensus_8340#3      ACGGTGGCCAGGAGACGCTGGTCGAGCACGT----------------------------- 261
                      *******************************                             

consensus_8340#1      GGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCATGTTCGTCGGTGGCCACAACAG 369
consensus_8340#2      GGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGC-TGT-CGTCGGTGGCCACAC--G 402
consensus_8340#4      GGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGC-TGT-CGTCGGTGGCCACAC--G 252
consensus_8340#0      GGGATACGGCTTCGGCCGGCCAGGTACCGCTCGGCGCTGTCGTCGGTGGCCACACGT--- 411
consensus_8340#3      ------------------------------------------------------------
                                                                                  

consensus_8340#1      TCCAGATGGGGAGATACTGTACGTTGGCCGCCAGCCTAC-ACGAGGGCGAATCGCCAAAC 428
consensus_8340#2      TCC-GATGGGGAGATACTGTACGTTGGCCGC--GCCTACCACGAGGG---ATCGC-AAAC 455
consensus_8340#4      TCC-GATGGGGAGATACTGTACGTTGGCCGC--GCCTACCACGAGGG---ATCGC-AAAC 305
consensus_8340#0      -CC-GATGGGGAGATACTGTACGTTGGCCGC--ACCTACCACGAGGG---ATCGC-AAAC 463
consensus_8340#3      -CC-GATGGGGAGATACTGTACGTTGGCCGC--ACCTACCACGAGGG---ATCGC-AAAC 313
                       ** ***************************   ***** *******   ***** ****

consensus_8340#1      GATCGGGCACACGGTGCAAGATGCTCGACACAAAATGCATCTACATACCCGTTAACAGGG 488
consensus_8340#2      GATCGG---CAAGGTGCA--GTGCTCG-CACAAC-TGCATCTACAT-CCCGT----ACGG 503
consensus_8340#4      GATCGG---CAAGGTGCA--GTGCTCG-CACAAC-TGCATCTACAT-CCCGT----ACGG 353
consensus_8340#0      GATCGG---CAAGGTGCA--GTGCTCG-CACAAC-TGCATCTACAT-CCCGT----ACGG 511
consensus_8340#3      GATCGG---CAAGGTGCA--GTGCTCG-CACAAC-TGCATCTACAT-CCCGT----ACGG 361
                      ******   ** ******   ****** *****  *********** *****    * **

consensus_8340#1      TGGTAGCGGGCACAGTGTCCGTACCCTACCTATGAGGTGCCTTGTGCCGAGCCGATTAAA 548
consensus_8340#2      TGGT-GCGGA---AGTGTCCGT-CCCTACCTATGAGGTGCTGTG---CGAGC-GATAAAA 554
consensus_8340#4      TGGT-GCGGA---AGTGTCCGT-CCCTACCTATGAGGTGCTGTG---CGAGC-GATAAAA 404
consensus_8340#0      GGGT-GCGGA---AGTGTCCGT-CCCTACCTATGAGGTGCTGTG---CGAGC-GATAAAA 562
consensus_8340#3      GGGT-GCGGA---AGTGTCCGT-CCCTACCTATGAGGTGCTGTG---CGAGC-GATAAAA 412
                       *** ****    ********* *****************  **   ***** *** ***

consensus_8340#1      AACCACCCAACGCCGCCAACGGGCCNAATGGCNGGTAAACCGTTTGGGACACACGGC--- 605
consensus_8340#2      CACAAGCGGAAGGCGATGGGTAAACGTTTGGACAGCACA--------------------- 593
consensus_8340#4      CACAAGCGGAAGGCGATGGGTAAACGTTGGGACAGCACAT--TTTGGAATCTACTTT--- 459
consensus_8340#0      CACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACAT--TTTGGAATCTAATTTTTT 620
consensus_8340#3      CACAAGTGGAAGGCAATGGGTAATCGTTGGGACAGCACAT--TTTGGAATCTAATTTTTT 470
                       ** *    * * *          *    **   * * *                     

consensus_8340#1      -ACACACTTTTTCGGGAATTCTCACTTTATTTCACCCAAGGGGC-CAGCTTACTAAATGC 663
consensus_8340#2      ------------------------------------------------------------
consensus_8340#4      -TTAACATGG-------------------------------------------------- 468
consensus_8340#0      AACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAA 680
consensus_8340#3      AACATGGCAGTTAATAAGCTACAACCACGGACTGACTGAAGGCCACAGGTGGTGGTACAA 530
                                                                                  

consensus_8340#1      GCTTACAAACCAACTGGAACTT------------------------------ 685
consensus_8340#2      ----------------------------------------------------
consensus_8340#4      ----------------------------------------------------
consensus_8340#0      ATGAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCCGCCGGCC------ 726
consensus_8340#3      ATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAAGGTCCCC 582