cluster # 8362

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Anopheles gambiae
cluster # 8362 cluster # 8362 Sequences # 10 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8362#0 length = 1098 sequences # 3
consensus_8362#1 length = 698 sequences # 2
consensus_8362#2 length = 687 sequences # 1

consensus_8362#3 length = 670 sequences # 1
consensus_8362#4 length = 643 sequences # 1
consensus_8362#5 length = 578 sequences # 2

consensusID : consensus_8362#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1098
fasta sequence

                              [CCGGTTCCATGGAAGTGGTAGCCGACCGTCCTGTGCATACATTGCTCAACATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAACAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGG-AGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGGCTACGTGCCGTGGGTGTTTTCGCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGGATCCGGCCAAAGGTGGAAAGGAGTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCAAACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGACTGGGCGATGTCTTTCTGCATCTGCTGCCGGAAACGTGGGAGTACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGCGCAGCGGCCTCCTGGGGTGTTGGGCGGTCTGCTGCTCTTCACGATGGTGGAAAAGATCTTCTCCGGCTATGCAAACGTGGACGAAAAGAACCCGCAGCCAAAGTGTGTCGAAATC]

[+] EMBL BM589589             [CCGGTTCCATGGAAGTGGTAGCCGACCGTCCTGTGCATACATTGCTCAACATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAACAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGG AGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08GVY             [           GAAGTGGTAGCCGACCGTCCTGTGCATACATTGCTCAACATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACGCACAAGAGAGTCAAATgttc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM602321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGGCTACGTGCCGTGGGTGTTTTCGCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGGATCCGGCCAAAGGTGGAAAGGAGTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCAAACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGACTGGGCGATGTCTTTCTGCATCTGCTGCCGGAAACGTGGGAGTACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGCGCAGCGGCCTCCTGGGGTGTTGGGCGGTCTGCTGCTCTTCACGATGGTGGAAAAGATCTTCTCCGGCTATGCAAACGTGGACGAAAAGAACCCGCAGCCAAAGTGTGTCGAAATC]




>consensus_8362#0
CCGGTTCCATGGAAGTGGTAGCCGACCGTCCTGTGCATACATTGCTCAACATTTCTAAGC
TTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGTTAAGAA
CGAAAACACCAAAACAATCTCAAGGTCTGGAGAACAAACCCCCAAGACCCCCAACGGACG
CGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGA
GTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACC
CGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACACACA
AGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACA
CGGCGGCTGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAGCGTTGGACT
GCAGTCCCTTTGAGTTCACAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCA
GTTCATCCGCAGATTTGTGTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCC
CCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAA
ACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTC
GGCTACGTGCCGTGGGTGTTTTCGCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATA
CTGCCGATGTTTATCATCCCGGATCCGGCCAAAGGTGGAAAGGAGTCGGAACTGAGTGAT
CCGGCCGAATCAAAGACCCTCAAACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGACTGGG
CGATGTCTTTCTGCATCTGCTGCCGGAAACGTGGGAGTACGAGATTGCGGCCGGACCGAC
GGCCGACGGACATCCGTCCCTGCGCAGCGGCCTCCTGGGGTGTTGGGCGGTCTGCTGCTC
TTCACGATGGTGGAAAAGATCTTCTCCGGCTATGCAAACGTGGACGAAAAGAACCCGCAG
CCAAAGTGTGTCGAAATC

consensusID : consensus_8362#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 698
fasta sequence

                              [CCGCCCACGCGTCCGTAACGTTCCATGGAAGTGGCAGCCGACCGTCCTGTGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAGCAACAC---ACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCAAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATTCGCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGATGACAACGATGATGAATGTCACCAGCAGC-TTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAG]

[+] EMBL BM620842             [CCGCCCACGCGTCCGTAACGTTCCATGGAAGTGGCAGCCGACCGTCCTGTGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAGCAACAC   ACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCAAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATTCGCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGATGACAACGATGATGAATGTCACCAGCAGC TTTCTGGACG                          ]
[+] EMBL BM597066             [            CCGTAACGTTCCATGGAAGTGGCAGCCGACCGTCCTGTGCATACATTGCTCAACATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTAAGTAAGAAGAAAACCTTCAAACGCCATCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAGCAACACACAACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCAC   GCGGCGGGCGTTTATTGCCATTGTGTTCGCC AATCCACTGAATGGAAACTGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCGAGTGTAGAGTA      AG AAGGGCGCAGCAGTTCATCCGCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAG]




>consensus_8362#1
CCGCCCACGCGTCCGTAACGTTCCATGGAAGTGGCAGCCGACCGTCCTGTGCATACATTG
CTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTG
AATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCA
AGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATT
AGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATT
CTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACC
GCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAAT
CACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGA
ATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCAAGTGTAGA
GTAACCTAGAGTAAGGGCGCAGCAGTTCATTCGCAGACTTGTGTGAAGTGTAACGAAGAA
ATACTCTCCGATCCTCAGCGGTCGCAGTGAAGATGACAACGATGATGAATGTCACCAGCA
GCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAG

consensusID : consensus_8362#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 687
fasta sequence

                              [CCGCACCAGGCTAGGTGCAGTCGCAATAACGTTCCATGGAAGTGGCAGCCGACCGTCCTGTGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCAAGTGTAGAGTAACCTAGACGGTCGCAGTGAAGATGACAACGATGATGAATGTCACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGGCTACGTGG]

[+] EMBL BM616053             [CCGCACCAGGCTAGGTGCAGTCGCAATAACGTTCCATGGAAGTGGCAGCCGACCGTCCTGTGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGTTTAGGAAGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCAAGTGTAGAGTAACCTAGACGGTCGCAGTGAAGATGACAACGATGATGAATGTCACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGGCTACGTGG]




>consensus_8362#2
CCGCACCAGGCTAGGTGCAGTCGCAATAACGTTCCATGGAAGTGGCAGCCGACCGTCCTG
TGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGT
TTAGGAAGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGA
GCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTT
CAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCG
GACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCA
GGCTGCAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATC
TTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCC
TAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTCC
TCAAGTGTAGAGTAACCTAGACGGTCGCAGTGAAGATGACAACGATGATGAATGTCACCA
GCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGG
AGTTTATCGTCTCGTTCGGCTACGTGG

consensusID : consensus_8362#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 670
fasta sequence

                              [CCGCCCACGCGTCCGCTGAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGACTACGTGCCGTGGGTGTTTTCGCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGGATCCGGCCAAAGGTGGAAAGGATTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCAAACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGCTGGGCGATGTCTTTCTGCATCTGCTGCCGGAAACGTGGGAGCACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGCGCAGCGGCCT]

[+] EMBL BM597492             [CCGCCCACGCGTCCGCTGAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGACTACGTGCCGTGGGTGTTTTCGCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGGATCCGGCCAAAGGTGGAAAGGATTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCAAACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGCTGGGCGATGTCTTTCTGCATCTGCTGCCGGAAACGTGGGAGCACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGCGCAGCGGCCT]




>consensus_8362#3
CCGCCCACGCGTCCGCTGAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGA
CAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCC
ATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACA
ACGCGCGCGTCCTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGA
CTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGG
CAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGG
AGATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGACTACGTGCCGTGGGTGTTTT
CGCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGG
ATCCGGCCAAAGGTGGAAAGGATTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCA
AACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGCTGGGCGATGTCTTTCTGCATCTGCTGC
CGGAAACGTGGGAGCACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGC
GCAGCGGCCT

consensusID : consensus_8362#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 643
fasta sequence

                              [CCGCGAGCGGCCCTAACAAGACGCGGTCGGTGCTGTTGTTACCCCCTTCTCCCTTTGTACCCAGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCATCGTACCGGACTAAATATTCTTAACGGACAGCACCCGGCGGGGGTTGTCCAATCTACGCAGGCAGGCAGGCTGAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA]

[+] EMBL BM602350             [CCGCGAGCGGCCCTAACAAGACGCGGTCGGTGCTGTTGTTACCCCCTTCTCCCTTTGTACCCAGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCATCGTACCGGACTAAATATTCTTAACGGACAGCACCCGGCGGGGGTTGTCCAATCTACGCAGGCAGGCAGGCTGAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTGAAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA]




>consensus_8362#4
CCGCGAGCGGCCCTAACAAGACGCGGTCGGTGCTGTTGTTACCCCCTTCTCCCTTTGTAC
CCAGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAA
ACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGG
TCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCATCGTACCGGACTA
AATATTCTTAACGGACAGCACCCGGCGGGGGTTGTCCAATCTACGCAGGCAGGCAGGCTG
AAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTAC
TAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGCCTAATCC
ACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTCCTCGAGT
GTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTGAAGTGTAACG
AAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGCAACGATGATGAACGTAA
CCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA

consensusID : consensus_8362#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 578
fasta sequence

                              [CCCCCTTCTCCCTTTGTACTGGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAACCCCCAAG-ACCCCCAAC-GGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGA]

[+] EMBL BX627513             [CCCCCTTCTCCCTTTGTACTGGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAACCCCCAAG ACCCCCAAC GGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTGCCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGA]
[+] EMBL CNS08N10             [                                    AAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAGAGCAAACCCCCAAGTACCCCCAACGGGACGCGCCAATCTGCTAATTGTGATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACCGGACTAAATATACTTAACGGACAATACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGCAGGCTGCAAACCGCACAAACAAC                                                                                                                                                                                                                                                                                                              ]




>consensus_8362#5
CCCCCTTCTCCCTTTGTACTGGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATC
TCAAGGTCTGGAGAGCAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTG
ATTCCGAATTCCTTCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAA
ACGCCACCGTACCGGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATC
TACGCAGGCAGGCAGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGT
GACAGCAGAGCATCTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTG
CCATTGTGTTCGCCTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCA
CAACGCGCTCGTCCTCAAGTGTAGAGTAAGAAGGGCGCAGCAGTTCATCCGCAGATTTGT
GTGTGTAACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAG
ATGGCAACGATGATGAACGTAACCAGCAGCTTTCTGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      ------CCGCCCACGCGT-----CCGTAACGTTCCATGGAAGTGGCAGCCGACCGTCCTG 49
consensus_8362#2      CCGCACCAGGCTAGGTGCAGTCGCAATAACGTTCCATGGAAGTGGCAGCCGACCGTCCTG 60
consensus_8362#0      ---------------------------CCGGTTCCATGGAAGTGGTAGCCGACCGTCCTG 33
consensus_8362#3      ------------------------------------------------------------
                                                                                  

consensus_8362#4      ------CCGCGAGCGGCCCTAACAAGACGCGGTCGGTGCTGTTGTTACCCCCTTCTCCCT 54
consensus_8362#5      -----------------------------------------------CCCCCTTCTCCCT 13
consensus_8362#1      TGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGT 109
consensus_8362#2      TGCATACATTGCTCAGCATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGT 120
consensus_8362#0      TGCATACATTGCTCAACATTTCTAAGCTTCAGTGCAGAAAGAGAAAATCACGCCCAATGT 93
consensus_8362#3      ------------------------------------------------------------
                                                                                  

consensus_8362#4      TTGTACCCAGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAG 114
consensus_8362#5      TTGTACTGGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAG 73
consensus_8362#1      TTAGGA-AGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAG 168
consensus_8362#2      TTAGGA-AGGTGAATGTATAGCTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAG 179
consensus_8362#0      TTAGGA-AGGTGAATGTATAGTTAAGAACGAAAACACCAAAACAATCTCAAGGTCTGGAG 152
consensus_8362#3      ------------------------------------------------------------
                                                                                  

consensus_8362#4      AGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCT 174
consensus_8362#5      AGCAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCT 133
consensus_8362#1      AGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCT 228
consensus_8362#2      AGCAAAACCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCT 239
consensus_8362#0      AACAAACCCCCAAGACCCCCAACGGACGCGCCAAGCTGCTAATTGTGATTCCGAATTCCT 212
consensus_8362#3      ------------------------------------------------------------
                                                                                  

consensus_8362#4      TCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCATCGTACC 234
consensus_8362#5      TCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACC 193
consensus_8362#1      TCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACC 288
consensus_8362#2      TCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACC 299
consensus_8362#0      TCAGGGTCGATTAGTTTCGAGTGTTTGAGTAAGAAGAAAACCTTCAAACGCCACCGTACC 272
consensus_8362#3      ------------------------------------------------------------
                                                                                  

consensus_8362#4      GGACTAAATATTCTTAACGGACAGCACCCGGCGGGGGTTGTCCAATCTACGCAGGCAGGC 294
consensus_8362#5      GGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGC 253
consensus_8362#1      GGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGC 348
consensus_8362#2      GGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGC 359
consensus_8362#0      GGACTAAATATTCTTAACGGACAGTACCCGGCGGGGGGTGTCCAATCTACGCAGGCAGGC 332
consensus_8362#3      ------------------------------------------------CCGCCCACGCGT 12
                                                                       ***   *  * 

consensus_8362#4      AGGCTG-AAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCAT 353
consensus_8362#5      AGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCAT 313
consensus_8362#1      AGGCTGCAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCAT 408
consensus_8362#2      AGGCTGCAAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCAT 419
consensus_8362#0      AGGCTGCAAACCGCACAAACAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCAT 392
consensus_8362#3      CCGCTG-AAACCGCACAAGCAACACACAAGAGAGTCAAATTTGCAGTGACAGCAGAGCAT 71
                        **** *********** *****************************************

consensus_8362#4      CTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGC 413
consensus_8362#5      CTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTGCCATTGTGTTCGC 373
consensus_8362#1      CTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGC 468
consensus_8362#2      CTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGC 479
consensus_8362#0      CTTGTACTAAATCACGCAACCAGGCACACGGCGGCTGGCCTTGATTGCCATTGTGTTCGC 452
consensus_8362#3      CTTGTACTAAATCACGCAACCAGGCACACGGCGGCGGGCCTTGATTGCCATTGTGTTCGC 131
                      *********************************** ************************

consensus_8362#4      CTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTC 473
consensus_8362#5      CTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTC 433
consensus_8362#1      CTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTC 528
consensus_8362#2      CTAATCCACTGAATGGGAAGCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCGCGTC 539
consensus_8362#0      CTAATCCACTGAATGGGA-GCGTTGGACTGCAGTCCCTTTGAGTTCACAACGCGCTCGTC 511
consensus_8362#3      CTAATCCACTGAATGGGAAGCGTTGGACTGTAGTCCCTTTGAGTTCACAACGCGCGCGTC 191
                      ****************** *********** ************************ ****

consensus_8362#4      CTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTG--- 530
consensus_8362#5      CTCAAGTGTAGAGTAAG-------AAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGT 486
consensus_8362#1      CTCAAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATTCGCAGACTTGTGTG--- 585
consensus_8362#2      CTCAAGTGTAGAGTAACCTAGACGGTCGCAGTGAAGATGACAACGATGATGAATGTC--- 596
consensus_8362#0      CTCAAGTGTAGAGTAAG-------AAGGGCGCAGCAGTTCATCCGCAGATTTGTGTGTGT 564
consensus_8362#3      CTCGAGTGTAGAGTAACCTAGAGTAAGGGCGCAGCAGTTCATCCCCAGACTTGTGTG--- 248
                      *** ************           *  *      *     *   **    ***    

consensus_8362#4      -------AAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGC 583
consensus_8362#5      AACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGA-TGGC 545
consensus_8362#1      -AAGTGTAAC------GAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGA-AGATGAC 637
consensus_8362#2      -ACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGAGATGAATCACTTCGT 655
consensus_8362#0      AACGTGGAAGTGTAACGAAGAAATACTCTCCGATCCCCAGCGGTCGCAGTGAAGA-TGGC 623
consensus_8362#3      -------AAGTGTAACGAAGAAATACTCTCCGATCCTCAGCGGTCGCAGTGAAGAATGGC 301
                             *        ** ****  ***  * ***   * ***  *  *       *   

consensus_8362#4      AACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA 643
consensus_8362#5      AACGATGATGAACGTAACCAGCAGCTTTCTGGA--------------------------- 578
consensus_8362#1      AACGATGATGAATGTCACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA 697
consensus_8362#2      GCCGGAGTTTATCGTCTCGTTCGGCTACGTGG---------------------------- 687
consensus_8362#0      AACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA 683
consensus_8362#3      AACGATGATGAACGTAACCAGCAGCTTTCTGGACGAAACGCTCGTCTATCTGTACCGGGA 361
                        **  * * *  **  *   * ***   ***                            

consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      G----------------------------------------------------------- 698
consensus_8362#2      ------------------------------------------------------------
consensus_8362#0      GATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGGCTACGTGCCGTGGGTGTTTTC 743
consensus_8362#3      GATGAATCACTTCGTGCCGGAGTTTATCGTCTCGTTCGACTACGTGCCGTGGGTGTTTTC 421
                                                                                  

consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      ------------------------------------------------------------
consensus_8362#2      ------------------------------------------------------------
consensus_8362#0      GCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGGA 803
consensus_8362#3      GCTGCTCGGTTCGGCACTGATCGGACTGTCCGGCATACTGCCGATGTTTATCATCCCGGA 481
                                                                                  

consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      ------------------------------------------------------------
consensus_8362#2      ------------------------------------------------------------
consensus_8362#0      TCCGGCCAAAGGTGGAAAGGAGTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCAA 863
consensus_8362#3      TCCGGCCAAAGGTGGAAAGGATTCGGAACTGAGTGATCCGGCCGAATCAAAGACCCTCAA 541
                                                                                  

consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      ------------------------------------------------------------
consensus_8362#2      ------------------------------------------------------------
consensus_8362#0      ACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGACTGGGCGATGTCTTTCTGCATCTGCTGC 923
consensus_8362#3      ACTGCTGCTCAGCTTCGCCGTGGGTGGCCTGCTGGGCGATGTCTTTCTGCATCTGCTGCC 601
                                                                                  

consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      ------------------------------------------------------------
consensus_8362#2      ------------------------------------------------------------
consensus_8362#0      CGGAAACGTGGGAGTACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGC 983
consensus_8362#3      GGAAACGTGGGAGCACGAGATTGCGGCCGGACCGACGGCCGACGGACATCCGTCCCTGCG 661
                                                                                  

consensus_8362#4      ------------------------------------------------------------
consensus_8362#5      ------------------------------------------------------------
consensus_8362#1      ------------------------------------------------------------
consensus_8362#2      ------------------------------------------------------------
consensus_8362#0      GCAGCGGCCTCCTGGGGTGTTGGGCGGTCTGCTGCTCTTCACGATGGTGGAAAAGATCTT 1043
consensus_8362#3      CAGCGGCCT--------------------------------------------------- 670
                                                                                  

consensus_8362#4      -------------------------------------------------------
consensus_8362#5      -------------------------------------------------------
consensus_8362#1      -------------------------------------------------------
consensus_8362#2      -------------------------------------------------------
consensus_8362#0      CTCCGGCTATGCAAACGTGGACGAAAAGAACCCGCAGCCAAAGTGTGTCGAAATC 1098
consensus_8362#3      -------------------------------------------------------