cluster # 8363

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Anopheles gambiae
cluster # 8363 cluster # 8363 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8363#0 length = 1624 sequences # 6
consensus_8363#1 length = 919 sequences # 1

consensus_8363#2 length = 773 sequences # 1
consensus_8363#3 length = 470 sequences # 1
consensus_8363#4 length = 390 sequences # 1

consensusID : consensus_8363#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1624
fasta sequence

                              [AAGTGCTGCGGGGCCGAGGGACCAAACGACTGGCAATCAAGCGCGTTCAACAACGCGGAGCGGCCGACACCGAGCATCGAGATCTCCAATCAACCAACCATCTACAAGGTGCNGGAAACGTGCTGCGTGTCCAACATTACGCCCGAGCAGTGCGAAAAGGCGACGCAGATGGAGTTCCTGGCGTCGACCAAGAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAGGCGGTACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCGAGTTGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTACAAGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATGTCTCCCTCGTCGTATGCATATTTATAGGTGTATATCCTTTAGCGAAGGGTGAATTTAGGTATTTTGTCGATTGGACCGATCTTGCTTTCTGCCAGAATCGATGTCAGAGTGCACTCCGGCAGAGGTTCTGAGCGGTCGCAGCTGGATCCACTCTAGGCGCGTTATCGGTTTACCCATCGCTAGTATCCATACGTACATATATACATACACCTATTTTACTAAAATAACGAAACGAAAACGAATCCCTACGATGTAGATCTTATAACAACAAATGGCCATGACAAAGCTTTTAGTTTTTTTGTTTTGTTTGTTTTTTAATCGTAAACGATAAATAATACTTAACCACGTTTCTTCTCCGTCTTAATCCGTCTCCTAGTTAACATTAACGAATCGTTTTATTAGGTGTATTTTTAAAACTGAAAAGTGTTTGACAGCGCACAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTTGATGCTTTTTTTTATTTCTTTTCAAAGAAATGAAACACACAAAACTGGCAATTATGCTCTTATTTATATGATTTACAAACACACTTACAAAAGAACAAACAAGAAAAAAATCGAACTCTAGTAGGCACGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACACACATTATATATATATAAAGATATATACAAACACACATATGAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAAGTGTAGTACTCGAGATATAAGCACTCCCGTTTTTTTTCGGCGGGTTGCGACACATTCTGCCTACACGTAGGTCACAACACTTATATATGTATGTAAACTTGAATGATACAAACATCGTACACACAAGCGCGCGCGCACGCATTCTTCGTACAAATAGAAACAAAAAGCAGCAGAATCCCAGATTGTTCGCTAACGAATTATGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTAAGGTGAATAAAATTTTATTTTATATTCGTTTTAAAAAAAA]

[+] EMBL BX629248             [AAGTGCTGCGGGGCCGAGGGACCAAACGACTGGCAATCAAGCGCGTTCAACAACGCGGAGCGGCCGACACCGAGCATCGAGATCTCCAATCAACCAACCATCTACAAGGTGCNGGAAACGTGCTGCGTGTCCAACATTACGCCCGAGCAGTGCGAAAAGGCGACGCAGATGGAGTTCCTGGCGTCGACCAAGAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAGGCGGTACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCGAGTTGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTACAAGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATGTCTCCCTCGTCGTATGCATATTTATAGGTGTATATCCTTTAGCGAAGGGTGAATTTAGGTATTTTGTCGATTGGACCGATCTTGCTTTCTGCCAGAATCGATGTCAGAGTGCACTCCGGCAGAGGTTCTGAGCGGTCGCAGCTGGATCCACTCTAGGCGCGTTATCGGTTTACCCATCGCTAGTATCCATACGTACATATATACATACACCTATTTTACTAAAATAACGAAACGAAAACGAATCCCTACGATGTAGATCTTATAACAACAAATGGGCATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX629139             [  GTGCTGCGGGGCCGAGGGACCAAACGACTGGCAATCAAGCGCGTTCAACAACGCGGAGCGGCCGACACCGAGCATCGAGATCTCCAATCAACCAACCATCTACAAGGTGCNGGAAACGTGCTGCGTGTCCAACATTACGCCCGAGCAGTGCGAAAAGGCGACGCAGATGGAGTTCCTGGCGTCGACCAAGAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAGGCGGTACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCGAGTTGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTACAAGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATGTCTCCCTCGTCGTATGCATATTTATAGGTGTATATCCTTTAGCGAAGGGTGAATTTAGGTATTTTGTCGATTGGACCGATCTTGCTTTCTGCCAGAATCGATGTCAGAGTGCACTCCGGCAGAGGTTCTGAGCGGTCGCAGCTGGATCCACTCTAGGCGCGTTATCGGTTTACCCATCGCTAGTATCCATACGTACATATATACATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AGA281732            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTCTGCCAGAATCGATGTCAGAGTGCACTCCGGCAGAGGTTCTGAGCGGTCGCAGCTGGATCCACTCTAGGCGCGTTATCGGTTTACCCATCGCTAGTATCCATACGTACATATATACATACACCTA TTTAC AAAATAACGAAACGAAAACGAATCCCTACGATGTAGATCTTATAACAACAAATGGCCATGACAAAGCTTTTAGTTTTTTTGTTTTGTTTGTTTTTTAATCGTAAACGATAAATAATACTTAACCACGTTTCTTCTCCGTCTTAATCCGTCTCCTAGTTAACATTAACGAATCGTTTTATTAGGTGTATTTTTAAAACTGAAAAGTGTTTGACAGCGCACAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTTGATGCCTTTTTTTATTTCTTTTCAAAGAAATGAAACACACAAAACTGGGAATTATGCTCTTATTTATATGATTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX622744             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            tgTATAACAACNAATGGCCATGACAAAGCTTTTAGTTTTTTTGTTTTGTTTGTTTTTTAATCGTAAACGATAAATAATACTTAACCACGTTTCTTCTCCGTCTTAATCCGTCTCCTAGTTAACATTAACGAATCGTTTTATTAGGTGTATTTTTAAAACTGAAAAGTGTTTGACAGCGCACAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTTGATGCTTTTTTTTATTTCTTTTCAAAGAAATGAAACACACAAAACTGGCAATTATGCTCTTATTTATATGATTTACAAACACACTTACAAAAGAACAAACAAGAAAAAAATCGAACTCTAGTAGGCACGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACACACATTATATATATATAAAGATATATACAAACACACATATGAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAAGTGTAGTACTCGAGATATA                                                                                                                                                                                                                                                                      ]
[-] EMBL AGA281012            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TACTTAACCACGTTTCTTCTCCGTCTTAATCCGTCTCCTAGTTAACATTAACGAATCGTTTTATTAGGTGTATTTTTAAAACTGAAAAGTGTTTGACAGCGCACAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTTGATGCTTTTTTTTATTTCTTTTCAAAGAAATGAAACACACAAAACTGGCAATTATGCTCTTATTTATATGATTTACAAACACACTTACAAAAGAACAAACAAGAAAAAAATCGAACTCTAGTAGGCACGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACACACATTATATATATATAAAGATATATACAAACACAaaaaa                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AGA280036            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTGAGTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAAGTGTAGTACTCGAGATATAAGCACTCCCGTTTTTTTTCGGCGGGTTGCGACACATTCTGCCTACACGTAGGTCACAACACTTATATATGTATGTAAACTTGAATGATACAAACATCGTACACACAAGCGCGCGCGCACGCATTCTTCGTACAAATAGAAACAAAAAGCAGCAGAATCCCAGATTGTTCGCTAACGAATTATGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTAAGGTGAATAAAATTTTATTTTATATTCGTTTTAAAAAAAA]




>consensus_8363#0
AAGTGCTGCGGGGCCGAGGGACCAAACGACTGGCAATCAAGCGCGTTCAACAACGCGGAG
CGGCCGACACCGAGCATCGAGATCTCCAATCAACCAACCATCTACAAGGTGCNGGAAACG
TGCTGCGTGTCCAACATTACGCCCGAGCAGTGCGAAAAGGCGACGCAGATGGAGTTCCTG
GCGTCGACCAAGAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAG
GCGGTACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCGAG
TTGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTAC
AAGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCA
AGCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCT
TTTTTATATGTCTCCCTCGTCGTATGCATATTTATAGGTGTATATCCTTTAGCGAAGGGT
GAATTTAGGTATTTTGTCGATTGGACCGATCTTGCTTTCTGCCAGAATCGATGTCAGAGT
GCACTCCGGCAGAGGTTCTGAGCGGTCGCAGCTGGATCCACTCTAGGCGCGTTATCGGTT
TACCCATCGCTAGTATCCATACGTACATATATACATACACCTATTTTACTAAAATAACGA
AACGAAAACGAATCCCTACGATGTAGATCTTATAACAACAAATGGCCATGACAAAGCTTT
TAGTTTTTTTGTTTTGTTTGTTTTTTAATCGTAAACGATAAATAATACTTAACCACGTTT
CTTCTCCGTCTTAATCCGTCTCCTAGTTAACATTAACGAATCGTTTTATTAGGTGTATTT
TTAAAACTGAAAAGTGTTTGACAGCGCACAAAACCCGCCAGCCTGTGCTGCGGGCGAACT
AACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACG
CATCGATAGATTTGATGCTTTTTTTTATTTCTTTTCAAAGAAATGAAACACACAAAACTG
GCAATTATGCTCTTATTTATATGATTTACAAACACACTTACAAAAGAACAAACAAGAAAA
AAATCGAACTCTAGTAGGCACGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTA
TACGTTTATCTATATACACACACATTATATATATATAAAGATATATACAAACACACATAT
GAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAG
AAAAGCAAAACGATGCAAAGCAAGTGTAGTACTCGAGATATAAGCACTCCCGTTTTTTTT
CGGCGGGTTGCGACACATTCTGCCTACACGTAGGTCACAACACTTATATATGTATGTAAA
CTTGAATGATACAAACATCGTACACACAAGCGCGCGCGCACGCATTCTTCGTACAAATAG
AAACAAAAAGCAGCAGAATCCCAGATTGTTCGCTAACGAATTATGGTAAATGTCTATTGA
ATCGATTGTGTTCTCTAAAGTGTAAGGTGAATAAAATTTTATTTTATATTCGTTTTAAAA
AAAA

consensusID : consensus_8363#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 919
fasta sequence

                              [ATGCGGGAGTNAGGGATCTTGTGGGATGCCGNTNNTTGTNGTTGTTNTAGNTGTGTNTTGTTGCCAGATAGGGGGTAGAAGTGGGGTGTAGCATCCTCCCGGTGNNCGTGGGCCATAGAGTGTAANTGCCTTTTGTAAANTGTTTTAATTATGTGGATNGTCTTTGTAGCCCAGGAAGACAAGNCAACGGTTTAANCCATTGGTGAGGGGCATCCTCTCGATGGCCTANANGGGGGAGAGTGTGGATCGTNCGGGATAGCCTNCNNTAAGGTGAGGTNCAACAGTGTGCGTANTTAAGTGCCAAAACTGTNGAGGGNGTTGNGAATTANTTTTGTGAAATGAGCCTTATGTACGGGTTNTTGAGTGCTTATNAATNACACTACGACGTGTGTANTAANGACTGAAGTGANGGGNATAGAAGTTAGTAGTACCCTGGTACTACCGACTAATGATGGGAGNTAATATGTTGTTTGCTTCCCCTTGGAAGTTCCCGTTAGCTTAAGAGTTNAACCCAGTTGTTAACCTTGTTATAACCGTACNNTAAAGGATATACGCCTAACGTATGGCATAAGGCAAAGTGTTAGTTACTCGGAGAATATATAGCACTCCCGTTTTTTTTCGGCCGGTTTGCGACACAAGTNTCTCGCCTTACACGTAGGTCACATACACTNTATATATGTATGTAAACTTGAATGGATNACAAACATCGTACACACAAGCGCGCGCGCAACGCATTCTTCGTACAAAATAGACATACATATAAANCACCAGTATCCCAGTNTTGTTCCTAACGAATTATGGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTAAGGTGAATAAAATTTTATTTTATATTCGTTTAAAAAAAGGAANNNATACAGCATGTTAACCTCAGGGGATCTGCATGAG]

[-] EMBL AL696080             [ATGCGGGAGTNAGGGATCTTGTGGGATGCCGNTNNTTGTNGTTGTTNTAGNTGTGTNTTGTTGCCAGATAGGGGGTAGAAGTGGGGTGTAGCATCCTCCCGGTGNNCGTGGGCCATAGAGTGTAANTGCCTTTTGTAAANTGTTTTAATTATGTGGATNGTCTTTGTAGCCCAGGAAGACAAGNCAACGGTTTAANCCATTGGTGAGGGGCATCCTCTCGATGGCCTANANGGGGGAGAGTGTGGATCGTNCGGGATAGCCTNCNNTAAGGTGAGGTNCAACAGTGTGCGTANTTAAGTGCCAAAACTGTNGAGGGNGTTGNGAATTANTTTTGTGAAATGAGCCTTATGTACGGGTTNTTGAGTGCTTATNAATNACACTACGACGTGTGTANTAANGACTGAAGTGANGGGNATAGAAGTTAGTAGTACCCTGGTACTACCGACTAATGATGGGAGNTAATATGTTGTTTGCTTCCCCTTGGAAGTTCCCGTTAGCTTAAGAGTTNAACCCAGTTGTTAACCTTGTTATAACCGTACNNTAAAGGATATACGCCTAACGTATGGCATAAGGCAAAGTGTTAGTTACTCGGAGAATATATAGCACTCCCGTTTTTTTTCGGCCGGTTTGCGACACAAGTNTCTCGCCTTACACGTAGGTCACATACACTNTATATATGTATGTAAACTTGAATGGATNACAAACATCGTACACACAAGCGCGCGCGCAACGCATTCTTCGTACAAAATAGACATACATATAAANCACCAGTATCCCAGTNTTGTTCCTAACGAATTATGGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTAAGGTGAATAAAATTTTATTTTATATTCGTTTAAAAAAAGGAANNNATACAGCATGTTAACCTCAGGGGATCTGCATGAG]




>consensus_8363#1
ATGCGGGAGTNAGGGATCTTGTGGGATGCCGNTNNTTGTNGTTGTTNTAGNTGTGTNTTG
TTGCCAGATAGGGGGTAGAAGTGGGGTGTAGCATCCTCCCGGTGNNCGTGGGCCATAGAG
TGTAANTGCCTTTTGTAAANTGTTTTAATTATGTGGATNGTCTTTGTAGCCCAGGAAGAC
AAGNCAACGGTTTAANCCATTGGTGAGGGGCATCCTCTCGATGGCCTANANGGGGGAGAG
TGTGGATCGTNCGGGATAGCCTNCNNTAAGGTGAGGTNCAACAGTGTGCGTANTTAAGTG
CCAAAACTGTNGAGGGNGTTGNGAATTANTTTTGTGAAATGAGCCTTATGTACGGGTTNT
TGAGTGCTTATNAATNACACTACGACGTGTGTANTAANGACTGAAGTGANGGGNATAGAA
GTTAGTAGTACCCTGGTACTACCGACTAATGATGGGAGNTAATATGTTGTTTGCTTCCCC
TTGGAAGTTCCCGTTAGCTTAAGAGTTNAACCCAGTTGTTAACCTTGTTATAACCGTACN
NTAAAGGATATACGCCTAACGTATGGCATAAGGCAAAGTGTTAGTTACTCGGAGAATATA
TAGCACTCCCGTTTTTTTTCGGCCGGTTTGCGACACAAGTNTCTCGCCTTACACGTAGGT
CACATACACTNTATATATGTATGTAAACTTGAATGGATNACAAACATCGTACACACAAGC
GCGCGCGCAACGCATTCTTCGTACAAAATAGACATACATATAAANCACCAGTATCCCAGT
NTTGTTCCTAACGAATTATGGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTA
AGGTGAATAAAATTTTATTTTATATTCGTTTAAAAAAAGGAANNNATACAGCATGTTAAC
CTCAGGGGATCTGCATGAG

consensusID : consensus_8363#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 773
fasta sequence

                              [GNGGGNACCGTTGGAATTACGTGTGTCCCGTGTCTTCGTCCTTGGTGTGTTTGGCCGGCGAANCGCGGCNGCTGTATANGCACGGTATCAATCTTNCAGAGCCGTNCTTTAATAGAGGGGGGGAAGTANACCCTAGGTTGCCCCAAGNCTANAGCCAAGCCAAGNNCAAGTCTAGCCANACGCTGATATCACCCTATAGCCCCTTAGATATCGGGTTCCNATCGGNNGTGCGCCAGTTTGCTTGTTGTTNTNATTATGGATTCTCGTCCTCTCTCTCTGTTGGTTAGAATATGTCTCCCCTGCGTCGTAAGGCAATATTTATAGGTGTATGAATCCCTTTAGCGAAGGTTGAATTTAGGTATTTTGTCGATTTGGACCGATCTTTGCTTTCTGGCCAGATATCGATGGTCCAGAGTGCAACCTCCGGCAGAGNTTCTGGANCGGTCNCAGCTGGAATCCACTNTAGGCGCGTTATCGGTGTTACCCATTCGGCCTAAGTATCCCAGTACCGTACAAGTAGTATACATACACCACGTTTCNTCGTCCGNTCGTTAATCCGTCTCNTTAGTTAACAGTTAACGAATCGTTTTATTAGGTGTAATTTGTAAANACTTGAAAAGTGTTTGACAGCGCACAAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTGATGCTTTTTTAACCTCGGGGGATTCTGCCTGAG]

[-] EMBL AL694712             [GNGGGNACCGTTGGAATTACGTGTGTCCCGTGTCTTCGTCCTTGGTGTGTTTGGCCGGCGAANCGCGGCNGCTGTATANGCACGGTATCAATCTTNCAGAGCCGTNCTTTAATAGAGGGGGGGAAGTANACCCTAGGTTGCCCCAAGNCTANAGCCAAGCCAAGNNCAAGTCTAGCCANACGCTGATATCACCCTATAGCCCCTTAGATATCGGGTTCCNATCGGNNGTGCGCCAGTTTGCTTGTTGTTNTNATTATGGATTCTCGTCCTCTCTCTCTGTTGGTTAGAATATGTCTCCCCTGCGTCGTAAGGCAATATTTATAGGTGTATGAATCCCTTTAGCGAAGGTTGAATTTAGGTATTTTGTCGATTTGGACCGATCTTTGCTTTCTGGCCAGATATCGATGGTCCAGAGTGCAACCTCCGGCAGAGNTTCTGGANCGGTCNCAGCTGGAATCCACTNTAGGCGCGTTATCGGTGTTACCCATTCGGCCTAAGTATCCCAGTACCGTACAAGTAGTATACATACACCACGTTTCNTCGTCCGNTCGTTAATCCGTCTCNTTAGTTAACAGTTAACGAATCGTTTTATTAGGTGTAATTTGTAAANACTTGAAAAGTGTTTGACAGCGCACAAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTGATGCTTTTTTAACCTCGGGGGATTCTGCCTGAG]




>consensus_8363#2
GNGGGNACCGTTGGAATTACGTGTGTCCCGTGTCTTCGTCCTTGGTGTGTTTGGCCGGCG
AANCGCGGCNGCTGTATANGCACGGTATCAATCTTNCAGAGCCGTNCTTTAATAGAGGGG
GGGAAGTANACCCTAGGTTGCCCCAAGNCTANAGCCAAGCCAAGNNCAAGTCTAGCCANA
CGCTGATATCACCCTATAGCCCCTTAGATATCGGGTTCCNATCGGNNGTGCGCCAGTTTG
CTTGTTGTTNTNATTATGGATTCTCGTCCTCTCTCTCTGTTGGTTAGAATATGTCTCCCC
TGCGTCGTAAGGCAATATTTATAGGTGTATGAATCCCTTTAGCGAAGGTTGAATTTAGGT
ATTTTGTCGATTTGGACCGATCTTTGCTTTCTGGCCAGATATCGATGGTCCAGAGTGCAA
CCTCCGGCAGAGNTTCTGGANCGGTCNCAGCTGGAATCCACTNTAGGCGCGTTATCGGTG
TTACCCATTCGGCCTAAGTATCCCAGTACCGTACAAGTAGTATACATACACCACGTTTCN
TCGTCCGNTCGTTAATCCGTCTCNTTAGTTAACAGTTAACGAATCGTTTTATTAGGTGTA
ATTTGTAAANACTTGAAAAGTGTTTGACAGCGCACAAAAACCCGCCAGCCTGTGCTGCGG
GCGAACTAACACAATATGGTAGTATTAGTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAA
CAAAACGCATCGATAGATTGATGCTTTTTTAACCTCGGGGGATTCTGCCTGAG

consensusID : consensus_8363#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 470
fasta sequence

                              [CCGCGGACGCGTGGGAAACAAGAAAAAAAAATCGAACTCTAGTAGGCACGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACACACATTATATATATAAAGATATATACAAACACACATATGAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAAGTGTAGTACTCGAGATATAAGCACTCCCGTTTTTTTTCGGCGGGTTGCGACACATTCTGCCTACACGTAGGTCACAACACTTATATATGTATGTAAACTTGAATGATACAAACATCGTACACACAAGCGCGCGCGCACGCATTCTTCGTACAAATAGAAACAAAAAGCAGCAGAATCCCAGATTGTTCGCTAACGAATTATGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTA]

[+] EMBL BM632115             [CCGCGGACGCGTGGGAAACAAGAAAAAAAAATCGAACTCTAGTAGGCACGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACACACATTATATATATAAAGATATATACAAACACACATATGAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAAGTGTAGTACTCGAGATATAAGCACTCCCGTTTTTTTTCGGCGGGTTGCGACACATTCTGCCTACACGTAGGTCACAACACTTATATATGTATGTAAACTTGAATGATACAAACATCGTACACACAAGCGCGCGCGCACGCATTCTTCGTACAAATAGAAACAAAAAGCAGCAGAATCCCAGATTGTTCGCTAACGAATTATGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTA]




>consensus_8363#3
CCGCGGACGCGTGGGAAACAAGAAAAAAAAATCGAACTCTAGTAGGCACGCTCGATTAGT
GCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACACACATTATATAT
ATAAAGATATATACAAACACACATATGAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAG
TTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAAGTGTAGTACTC
GAGATATAAGCACTCCCGTTTTTTTTCGGCGGGTTGCGACACATTCTGCCTACACGTAGG
TCACAACACTTATATATGTATGTAAACTTGAATGATACAAACATCGTACACACAAGCGCG
CGCGCACGCATTCTTCGTACAAATAGAAACAAAAAGCAGCAGAATCCCAGATTGTTCGCT
AACGAATTATGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAGTGTA

consensusID : consensus_8363#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 390
fasta sequence

                              [CCGCCCACGACGTCCGCCCACGCATCCGGTGCGAAAAGGCGACGCAGATGGAGTTCCTGGCGTCCACCAATAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAGGCGGGACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCCAGTTGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTACGAGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATGTCTCCCTCGTCGCATGCATAT]

[+] EMBL BM650891             [CCGCCCACGACGTCCGCCCACGCATCCGGTGCGAAAAGGCGACGCAGATGGAGTTCCTGGCGTCCACCAATAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAGGCGGGACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCCAGTTGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTACGAGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATGTCTCCCTCGTCGCATGCATAT]




>consensus_8363#4
CCGCCCACGACGTCCGCCCACGCATCCGGTGCGAAAAGGCGACGCAGATGGAGTTCCTGG
CGTCCACCAATAAGCAGCCGCATCTGTTCGCCGATGGTTGCATGGAAAAGCTGGTGCAGG
CGGGACAGGATAACATCAAGCTGATCTGTTACGTCGGTGCGGCGATCGTCGGCATCCAGT
TGCTGACGTTGATACTTTCCCTGCTGCTGTGTTGCGCGATCCGCCGAAACGATAACTACG
AGCACTAAAAGGGGAGAAGCAGTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAA
GCCAAAATCGGTCATCGATTGACAGTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTT
TTTTATATGTCTCCCTCGTCGCATGCATAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8363#0      ------------------------------------------------------------
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ATGCGGGAGTNAGGGATCTTGTGGGATGCCGNTNNTTGTNGTTGTTNTAGNTGTGTNTTG 60
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      ------------------------------------------------------------
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ----------GNGGGNACCGTTGGAATTACGTGTGTCCCGTGTCTTCGTCCTTGGTGTGT 50
consensus_8363#1      TTGCCAGATAGGGGGTAGAAGTGGGGTGTAGCATCCTCCCGGTGNNCGTGGGCCATAGAG 120
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      -------------------AAGTGCTGCGGGGCCGAGGGACCAAACGACTGGCAATCAAG 41
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      TTGGCCGGCGAANCGCGGCNGCTGTATANGCACGGTATCAATCTTNCAGAGCCGTNCTTT 110
consensus_8363#1      TGTAANTGCCTTTTGTAAANTGTTTTAATTATGTGGATNGTCTTTGTAGCCCAGGAAGAC 180
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      CGCGTTCAACAACGCGGAGCGGCCGACACCGAGCATCGAGATCTCCAATCAACCAACCAT 101
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      AATAGAGGGGGGGAAGTANACCCTAGGTTGCCCCAAGNCTANAGCCAAGCCAAGNNCAAG 170
consensus_8363#1      AAGNCAACGGTTTAANCCATTGGTGAGGGGCATCCTCTCGATGGCCTANANGGGGGAGAG 240
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      CTACAAGGTGCNGGAAACGTGCTGCGTGTCCAACATTACGCCCGAGCA--GTGCGAAAAG 159
consensus_8363#4      ----------------CCGCCCACGACGTCCGCCCACGCATCCG------GTGCGAAAAG 38
consensus_8363#2      TCTAGCCANACGCTGATATCACCCTATAGCCCCTTAGATATCGG------GTTCCNATCG 224
consensus_8363#1      TGTGGATCGTNCGGGATAGCCTNCNNTAAGGTGAGGTNCAACAGTGTGCGTANTTAAGTG 300
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      GCGACGCAGATGGAGTTCCTGGCGTCGACCAAGAAGCAGCCGCATCTGTTCGCCGATGGT 219
consensus_8363#4      GCGACGCAGATGGAGTTCCTGGCGTCCACCAATAAGCAGCCGCATCTGTTCGCCGATGGT 98
consensus_8363#2      GNNGTGC-GCCAGTTTGCTTGTTGTTN-TNATTATGGATTCTCGTCCTCTCTCT--CTGT 280
consensus_8363#1      CCAAAACTGTNGAGGGNGTTGNGAATTANTTTTGTGAAATGAGCCTTATGTACGGGTTNT 360
consensus_8363#3      -------------------------------------------------CCGCGGACGCG 11
                                                                          *       

consensus_8363#0      TGCATG---GAAAAGCTGGTGCAGGCGGTACAGGATAACATC---AAGCTGATCTGTTAC 273
consensus_8363#4      TGCATG---GAAAAGCTGGTGCAGGCGGGACAGGATAACATC---AAGCTGATCTGTTAC 152
consensus_8363#2      TGGTTA---GAATATGTCTCCCCTGCGTCGTAAGGCAATATTTATAGGTGTATGAATCCC 337
consensus_8363#1      TGAGTGCTTATNAATNACACTACGACGTGTGTANTAANGACTGAAGTGANGGGNATAGAA 420
consensus_8363#3      TGGGAAACAAGAAAAAAAAATCGAACTCTAGTAGGCACGCTCGA--TTAGTGCAACTAAT 69
                      **           *           *          *                       

consensus_8363#0      GTCGGTGCGG--CGATCGTCGGCATCGAGTTG-CTGACGTTGATACTTTCCCTGCTGCTG 330
consensus_8363#4      GTCGGTGCGG--CGATCGTCGGCATCCAGTTG-CTGACGTTGATACTTTCCCTGCTGCTG 209
consensus_8363#2      TTTAGCGAAGGTTGAATTTAGGTATTTTGTCGATTTGGACCGATCTTTGCTTTCTGGCCA 397
consensus_8363#1      GTTAGTAGTACCCTGGTACTAC-CGACTAATGATGGGAGNTAATATGTTGTTTGCT---- 475
consensus_8363#3      GCTA--AATATTTTAATACTATACGTTTATCTATATACACACACATTATATATATAAAGA 127
                                                                *         *       

consensus_8363#0      TGTTGCG-CGATCCGC--CGAAACGATAACTACAAGCACTAAAAGGGGAGAAGC-AGTGC 386
consensus_8363#4      TGTTGCG-CGATCCGC--CGAAACGATAACTACGAGCACTAAAAGGGGAGAAGC-AGTGC 265
consensus_8363#2      GATATCGATGGTCCAGAGTGCAACCTCCGGCAGAGNTTCTGGANCGGTCNCAGCTGGAAT 457
consensus_8363#1      TCCCCTTGGAAGTTCCCGTTAGCTTAAGAGTTNAACCCAGTTGTTAACCTT-GTTATAAC 534
consensus_8363#3      TATATACAAACACACATATGAGTATATTTTTCTCGCTGAGTCCGTAGCTAGAGTTACCGT 187
                                                                          *       

consensus_8363#0      C-AGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACA 445
consensus_8363#4      C-AGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAAGCCAAAATCGGTCATCGATTGACA 324
consensus_8363#2      C-CACTNTAGGCGCGTTATCGGTGTTACCCATTCG-GCCTAAGTATCCCAGTACCGTACA 515
consensus_8363#1      CGTACNNTAAAGGATATACGCCTAACGTATGGCATAAGGCAAAGTGTTAGTTACTCGGAG 594
consensus_8363#3      TGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAGCAA-GTGT--AGTACTCGAGA 244
                          *   *        *                      **                  

consensus_8363#0      GTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATG--TCTCCCTCGTCGT 503
consensus_8363#4      GTTTGCTTTTTTTATTATGATTCTCTCCCTCCTCTTTTTTATATG--TCTCCCTCGTCGC 382
consensus_8363#2      AGTAG-TATACATACACCACGTTTCNTCGTCCGNTCGTTAATCCG--TCTCNTTAGTTAA 572
consensus_8363#1      AATAT--ATAGCACTCCCGTTTTTTTTCGGCCGGTTTGCGACACAAGTNTCTCGCCTTAC 652
consensus_8363#3      TATA-----AGCACTCCCGTTTTTTTTCGGCGGGTT-GCGACACA-----TTCTGCCTAC 293
                        *                  * *   *  *   *     *                   

consensus_8363#0      ATGCATATTTATAGGTGTA-TATCCTTTAGCGAAGGGTGAATTTAGGTATTTTGTCGATT 562
consensus_8363#4      ATGCATAT---------------------------------------------------- 390
consensus_8363#2      CAGTTAACGAATCGTTTTA-TTAGGTGTAATTTGTAAANACTTGAAAAGTGTTTGACAGC 631
consensus_8363#1      ACGTAGGTCACATACACTNTATATATGTATGTAAACTTGAATGGATNACAAACATCGTAC 712
consensus_8363#3      ACGTAGGTCACA-ACACTT-ATATATGTATGTAAACTTGAATGA--TACAAACATCGTAC 349
                        *                                                         

consensus_8363#0      GGACCGATCTTGCT-TTCTGCCAGAATCGATGTCAGAG-TGCACTCCGGCAGAGGTTCTG 620
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      GCACAAAAACCCGC-CAGCCTGTGCTGCGGGCGAACTA-ACACAATATGGTAGTATTAGT 689
consensus_8363#1      ACACAAGCGCGCGCGCAACGCATTCTTCGTACAAAATAGACATACATATAAANCACCAGT 772
consensus_8363#3      ACACAAGCGCGCGCGCA-CGCATTCTTCGTACAAA-----TAGAAACAAAAAGCAGCAGA 403
                                                                                  

consensus_8363#0      AGCGGTCGCAGCTGGATCCACTCTAGGCGCGTTATCGGTTTACCCATCGCTAGTATCCAT 680
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      AGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTGATGCTTTTT 749
consensus_8363#1      ATCCCAGTNTTGTTCCTAACGAATTATGGGTAAATGTCTATTGAATCGATTGTGTTCTCT 832
consensus_8363#3      ATCCCAGATTGTTCGCTAACGAATTATGG-TAAATGTCTATTGAATCGATTGTGTTCTCT 462
                                                                                  

consensus_8363#0      ACGTACATATATACATACACCTATTTTACTAAAATAACGAAACGAAAACGAATCCCTACG 740
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      TAACCTCGGGGGATTCTGCCTGAG------------------------------------ 773
consensus_8363#1      AAAGTGTAAGGTGAATAAAATTTTATTTTATATTCGTTTAAAAAAAGGAANNNATACAGC 892
consensus_8363#3      AAAGTGTA---------------------------------------------------- 470
                                                                                  

consensus_8363#0      ATGTAGATCTTATAACAACAAATGGCCATGACAAAGCTTTTAGTTTTTTTGTTTTGTTTG 800
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ATGTTAACCTCAGGGGATCTGCATGAG--------------------------------- 919
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      TTTTTTAATCGTAAACGATAAATAATACTTAACCACGTTTCTTCTCCGTCTTAATCCGTC 860
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      TCCTAGTTAACATTAACGAATCGTTTTATTAGGTGTATTTTTAAAACTGAAAAGTGTTTG 920
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      ACAGCGCACAAAACCCGCCAGCCTGTGCTGCGGGCGAACTAACACAATATGGTAGTATTA 980
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      GTAGTAATCCGCGTCCTCCCCCAAAGCCAAAAACAAAACGCATCGATAGATTTGATGCTT 1040
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      TTTTTTATTTCTTTTCAAAGAAATGAAACACACAAAACTGGCAATTATGCTCTTATTTAT 1100
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      ATGATTTACAAACACACTTACAAAAGAACAAACAAGAAAAAAATCGAACTCTAGTAGGCA 1160
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      CGCTCGATTAGTGCAACTAATGCTAAATATTTTAATACTATACGTTTATCTATATACACA 1220
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      CACATTATATATATATAAAGATATATACAAACACACATATGAGTATATTTTTCTCGCTGA 1280
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      GTCCGTAGCTAGAGTTACCGTTGTACTTTAACGAACAAAGAAAAGCAAAACGATGCAAAG 1340
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      CAAGTGTAGTACTCGAGATATAAGCACTCCCGTTTTTTTTCGGCGGGTTGCGACACATTC 1400
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      TGCCTACACGTAGGTCACAACACTTATATATGTATGTAAACTTGAATGATACAAACATCG 1460
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      TACACACAAGCGCGCGCGCACGCATTCTTCGTACAAATAGAAACAAAAAGCAGCAGAATC 1520
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      CCAGATTGTTCGCTAACGAATTATGGTAAATGTCTATTGAATCGATTGTGTTCTCTAAAG 1580
consensus_8363#4      ------------------------------------------------------------
consensus_8363#2      ------------------------------------------------------------
consensus_8363#1      ------------------------------------------------------------
consensus_8363#3      ------------------------------------------------------------
                                                                                  

consensus_8363#0      TGTAAGGTGAATAAAATTTTATTTTATATTCGTTTTAAAAAAAA 1624
consensus_8363#4      --------------------------------------------
consensus_8363#2      --------------------------------------------
consensus_8363#1      --------------------------------------------
consensus_8363#3      --------------------------------------------