cluster # 8370

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Anopheles gambiae
cluster # 8370 cluster # 8370 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8370#0 length = 1019 sequences # 3
consensus_8370#1 length = 893 sequences # 4

consensus_8370#2 length = 714 sequences # 1
consensus_8370#3 length = 344 sequences # 1
consensus_8370#4 length = 217 sequences # 1

consensusID : consensus_8370#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1019
fasta sequence

                              [GCCNTCTAGAGACCAGAGCTGACTGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCCTCCGCCTCCGACGTGTGTGTGTGTGGGTGTATGTGTGTGACACGATAAGCCCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAGCGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCGGCCTAATGGTGGCGGCCGCCCTGCTGGCCACGCTGGCCAGCGGTCACGCGGACACGGCGAGCGTCCACCTGACGAAGGACAACTTCCAGTCGGAGCTCGAGGGCAGCAGCTACTTCGTCATGTTCTACGCCCCCTGGTGTGACTACTGCAAGAAGCTGGCACCGACCTGGGCCACCCTCGCGAAGGCCCGCAACGGCGACCCGGACGGGGTGGTCAAGATTGGGCGCGTCGACTGCACGACCGACGGGGATCTCTGCACGCAGCACGACGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACGGCGCCACCAAGTACCGTGGGGCGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACGAGCAGCTGGCACCGGCGGCGGGCGACGGCCCGGCCAAGGGCGCCGACCGGGACGGCGAGGACGGTGCGCAGGAGGATGGCGGGCAGGCGGACGCCCCGCCCGCCCCGGTCTCGCCGCTGACCGAGCTGACCGAGGACACGTTCGCGAAGCACGTCTCGAGCGGCAAGCACTTCGTCAAGTTCTACGCGCCCTGGTGCGGNCACTGCACCAAGCTCGCGCCGACCTGGGANGAGCTGGCCCGCAGCCTCGAGCACGAGCGGGACATCCGCGTGTCCAANATCGACTGCACGCAGTACCGGNCGATCTGTA]

[+] EMBL BX619270             [GCCNTCTAGAGACCAGAGCTGACTGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCCTCCGCCTCCGACGTGTGTGTGTGTGGGTGTATGTGTGTGACACGATAAGCCCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAGCGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCGGCCTAATGGTGGCGGCCGCCCTGCTGGCCACGCTGGCCAGCGGTCACGCGGACACGGCGAGCGTCCACCTGACGAANGACAACTTCCAGTCGGAGCTCGANGGCAGCAGCTACTTCGTCATGTTCTACG CCCCTGGTGTGACTACTGCAAGANGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX602192             [                                 GAGGCTGTGGCAGTTGTGTGTTCCCTCCGCCTCCGACGTGTGTGTGTGTGGGTGTATGTGTGTGACACGATAAGCCCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAGCGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCGGCCTAATGGTGGCGGCCGCCCTGCTGGCCACGCTGGCCAGCGGTCACGCGGACACGGCGAGCGTCCACCTGACGAAGGACAACTTCCAGTCGGAGCTCGAGGGCAGCAGCTACTTCGTCATGTTCTACGCCCCCTGGTGTGACTACTGCAAGAAGCTGGCACCGACCTGGGCCACCCTCGCGAAGGCCCGCAACGGCGACCCGGACGGGGTGGTCAAGATTGGGCGCGTCGACTGCACGACCGACGGGGATCTCTGCACGCAGCACGACGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACGGCGCCACCAAGTACCGTGGGGCGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACGAGCAGCTGGCACCGGCGGCGGGCGACGGCCCGGCCAAGGGCGCCG                                                                                                                                                                                                                                                                        ]
[+] EMBL BX621280             [                                                                                                                                                                                                                  CGGGCTAGCGACCCGGAGCGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCGGCCTAATGGTGGCGGCCGCCCTGCTGGCCACGCTGGCCAGCGGTCACGCGGACACGGCGAGCGTCCACCTGACGAAGGACAACTTCCAGTCGGAGCTCGAGGGCAGCAGCTACTTCGTCATGTTCTACGCCCCCTGGTGTGACTACTGCAAGAAGCTGGCACCGACCTGGGCCACCCTCGCGAAGGCCCGCAACGGCGACCCGGACGGGGTGGTCAAGATTGGGCGCGTCGACTGCACGACCGACGGGGATCTCTGCACGCAGCACGACGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACGGCGCCACCAAGTACCGTGGGGCGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACGAGCAGCTGGCACCGGCGGCGGGCGACGGCCCGGCCAAGGGCGCCGACCGGGACGGCGAGGACGGTGCGCAGGAGGATGGCGGGCAGGCGGACGCCCCGCCCGCCCCGGTCTCGCCGCTGACCGAGCTGACCGAGGACACGTTCGCGAAGCACGTCTCGAGCGGCAAGCACTTCGTCAAGTTCTACGCGCCCTGGTGCGGNCACTGCACCAAGCTCGCGCCGACCTGGGANGAGCTGGCCCGCAGCCTCGAGCACGAGCGGGACATCCGCGTGTCCAANATCGACTGCACGCAGTACCGGNCGATCTGTA]




>consensus_8370#0
GCCNTCTAGAGACCAGAGCTGACTGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCCTC
CGCCTCCGACGTGTGTGTGTGTGGGTGTATGTGTGTGACACGATAAGCCCTTTTCCATCG
GCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTTTTAGTGAGATAA
AACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAGCGTTGGCAAGAT
AAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAG
CAAAATGGCCGGAATGCAGCGAACCATCGTCGGCCTAATGGTGGCGGCCGCCCTGCTGGC
CACGCTGGCCAGCGGTCACGCGGACACGGCGAGCGTCCACCTGACGAAGGACAACTTCCA
GTCGGAGCTCGAGGGCAGCAGCTACTTCGTCATGTTCTACGCCCCCTGGTGTGACTACTG
CAAGAAGCTGGCACCGACCTGGGCCACCCTCGCGAAGGCCCGCAACGGCGACCCGGACGG
GGTGGTCAAGATTGGGCGCGTCGACTGCACGACCGACGGGGATCTCTGCACGCAGCACGA
CGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACGGCGCCAC
CAAGTACCGTGGGGCGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACGAGCAGCTGGC
ACCGGCGGCGGGCGACGGCCCGGCCAAGGGCGCCGACCGGGACGGCGAGGACGGTGCGCA
GGAGGATGGCGGGCAGGCGGACGCCCCGCCCGCCCCGGTCTCGCCGCTGACCGAGCTGAC
CGAGGACACGTTCGCGAAGCACGTCTCGAGCGGCAAGCACTTCGTCAAGTTCTACGCGCC
CTGGTGCGGNCACTGCACCAAGCTCGCGCCGACCTGGGANGAGCTGGCCCGCAGCCTCGA
GCACGAGCGGGACATCCGCGTGTCCAANATCGACTGCACGCAGTACCGGNCGATCTGTA

consensusID : consensus_8370#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 893
fasta sequence

                              [CGCGTGTCCAAGATCGACTGCACGCAGTACCGGCCGATCTGTACCGACTTCGAGGTGAAAGGGCTACCCGACGCTGCTGTGGATCGAGGACGGCAAGAAGATCGAGAAGTACACGGGCCCGCGCACGCACGCCGACCTGAAGCAGTACGTGGCGCGGATGGCCGGCGGGCTGAAGGAGGACGGCGCCCAGGGCGCCGAGCCGAAGGGCGAGGGCACGCTGGAGGGTGGGGCCGAGTCGGGACGACAACCGGTCG-GTGGTGGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCGAAGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCGCCGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAGGTGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTATCCGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCGCTCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAGCTGTAAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGA-AGTAGAGGGAAAAGTTCTATCCGATTCCGATGTTCCGATGCATTTACTTCGTCGTAGCGGAGTTTGCAGGGGCAGTGGGTCCGTCTTTTATTTTTTAAACCGATAAAGACACGAATGTGTACGTGTTTGTGTGTGCGTGTGTGTGAGTGTACGTCAGATAATGGTCTATCACTTCGTTAAACTTCAATAAAGGCGTGCTGCCCCTTAGTGAGCGTCGCTCGGGGTAATGATAAAAAACCCACGCGTCCGCGG]

[-] EMBL BM584718             [CGCGTGTCCAAGATCGACTGCACGCAGTACCGGCCGATCTGTACCGACTTCGAGGTGAAAGGGCTACCCGACGCTGCTGTGGATCGAGGACGGCAAGAAGATCGAGAAGTACACGGGCCCGCGCACGCACGCCGACCTGAAGCAGTACGTGGCGCGGATGGCCGGCGGGCTGAAGGAGGACGGCGCCCAGGGCGCCGAGCCGAAGGGCGAGGGCACGCTGGAGGGTGGGGCCGAGTCGGGACGACAACCGGTCG GTGGTGGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCGAAGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCGCCGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAGGTGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTATCCGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCGCTCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAGCTGTAAAAGACAGAGATAGAGAGAGAGAGCGAGAGAGAGAGAGAG AGAGAGAgagcgg                                                                                                                                                                                                                                            ]
[-] EMBL BM618009             [                                                                                                                                                                                          CCA GGCGCCGAGCCGAAGGGCGAGGGCACGCTGGAGGGTGGGGCCGAG CGGGACGACAACCGGTCG GTGGTGGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCGAAGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCGCCGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAGGTGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTATCCGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCGCTCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAGCTGTAAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGA AGTAGAGGGAAAAGTTCTATCCGATTCCGATGTTCCGATGCATTTACTTCGTCGTAGCGGAGTTTGCAGGGGCAGTGGGTCCGTCTTTTATTTTTTAAACCGATAAAGACACGAATGTGTACGTGTTTGTGTGTGCGTGTGTGTGAGTGTACGTCAGATAATGGTCTATCACTTCGTTAAACTTCAATAAAGGCGTGCTGCCCCTTAGTGAGCGTCGCTCGGGGTAATGATAAAAAACCCACGCGTCCGCGG]
[+] EMBL BM628180             [                                                                                                                                                                                                                                            ccGGACGACAACCGGTCG GTGGTGGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCGAAGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCGCCGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAGGTGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTATCCGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCGCTCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAGCTGTAAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGA AGTAGAGGGAAAAGTTCTATCCGATTCCGATGTTCCGATGCATTTACTTCGTCGTAGCGGAGTTTGCAGGGGCAGTGGGTCCGTCTTTTATTTTTTAAACCGATAAAGACACGAATGTGTACGTGTTTGTGTGTGCGTGTGTGTGAGTGTACGTCAGATAATGGTCTATCACTTCGTTAAACTTCAATAAA                                                             ]
[+] EMBL BM609851             [                                                                                                                                                                                                                                                     ccgCGGACGCGTG  GGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCGAAGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCGCCGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAGGTGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTATCCGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCGCTCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAGCTGTAAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGA AGTAGAGGGAAAAGTTCTATCCGATTCCGATGTTCCGATGCATTTACTTCGTCGTAGCGGAGTTTGCAGGGGCAGTGGGTCCGTCTTTTATTTTTTACACCGATAAAGACACGAATGTGTACGTGTTTGTGTGTGCGTGTGTGTGAGTGTACGTCAGATAATGGTCTATCACTTCGTT                                                                          ]




>consensus_8370#1
CGCGTGTCCAAGATCGACTGCACGCAGTACCGGCCGATCTGTACCGACTTCGAGGTGAAA
GGGCTACCCGACGCTGCTGTGGATCGAGGACGGCAAGAAGATCGAGAAGTACACGGGCCC
GCGCACGCACGCCGACCTGAAGCAGTACGTGGCGCGGATGGCCGGCGGGCTGAAGGAGGA
CGGCGCCCAGGGCGCCGAGCCGAAGGGCGAGGGCACGCTGGAGGGTGGGGCCGAGTCGGG
ACGACAACCGGTCGGTGGTGGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCGA
AGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCGC
CGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAGG
TGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTATC
CGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCGC
TCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAGC
TGTAAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAGTAGAGGGAAAAGTTCTA
TCCGATTCCGATGTTCCGATGCATTTACTTCGTCGTAGCGGAGTTTGCAGGGGCAGTGGG
TCCGTCTTTTATTTTTTAAACCGATAAAGACACGAATGTGTACGTGTTTGTGTGTGCGTG
TGTGTGAGTGTACGTCAGATAATGGTCTATCACTTCGTTAAACTTCAATAAAGGCGTGCT
GCCCCTTAGTGAGCGTCGCTCGGGGTAATGATAAAAAACCCACGCGTCCGCGG

consensusID : consensus_8370#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 714
fasta sequence

                              [GAGGTTTTTCATCGGCAAGCAAAGNGCGGCCGCTGCAATTAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCTGACCCGGAGCGTTGGCAAGATAAGTGAACAGACAGACCTAAAACACATACACACAGATGACACCTAGACACCCTGTGCGTGGAAATGCAAAATGGCCTGGAATTGCAGCTGAACCATACGTCGGCCTAATGGTGGCGGCGCCCTTGAGTGGCCACGCTTGGCCAGCGGTCACGCGGGAACACTGGGGGAGGCGTACCACACTTGACGAAGGGAACAAACTTCCAGTCGGAGCTCGAGGGGCAAGGCAGCTAACTATACGTCATGTTACTAACGCNCCACCTTGGTGTTGTGACTAACTTGCGAATGAATGCCTTGGNAACCGAGCCTGGGGGCACACCCCTCGCGCAAGGGCCCGGCAACTGGAGAACCCAGGACTGGNGGAGGGTGGGTACAAACGNAANATGGGGGCGCGCGTACGGAACGTGGACAACCGAACACGCAGCGGGGGGCAATCTTCCTTGNGCACATGACANGAACGGACNGGTTCAACTCCGTGTNTTAATCCCCGACTTGGCTTGAAAAGNCTTGTCTCCCAGCAACAGGGACATTGGGCTGGACGGCGTAGAACCTGTGCTGCCCACNCAACGATAANCCNATGGNGG]

[+] EMBL AL695669             [GAGGTTTTTCATCGGCAAGCAAAGNGCGGCCGCTGCAATTAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCTGACCCGGAGCGTTGGCAAGATAAGTGAACAGACAGACCTAAAACACATACACACAGATGACACCTAGACACCCTGTGCGTGGAAATGCAAAATGGCCTGGAATTGCAGCTGAACCATACGTCGGCCTAATGGTGGCGGCGCCCTTGAGTGGCCACGCTTGGCCAGCGGTCACGCGGGAACACTGGGGGAGGCGTACCACACTTGACGAAGGGAACAAACTTCCAGTCGGAGCTCGAGGGGCAAGGCAGCTAACTATACGTCATGTTACTAACGCNCCACCTTGGTGTTGTGACTAACTTGCGAATGAATGCCTTGGNAACCGAGCCTGGGGGCACACCCCTCGCGCAAGGGCCCGGCAACTGGAGAACCCAGGACTGGNGGAGGGTGGGTACAAACGNAANATGGGGGCGCGCGTACGGAACGTGGACAACCGAACACGCAGCGGGGGGCAATCTTCCTTGNGCACATGACANGAACGGACNGGTTCAACTCCGTGTNTTAATCCCCGACTTGGCTTGAAAAGNCTTGTCTCCCAGCAACAGGGACATTGGGCTGGACGGCGTAGAACCTGTGCTGCCCACNCAACGATAANCCNATGGNGG]




>consensus_8370#2
GAGGTTTTTCATCGGCAAGCAAAGNGCGGCCGCTGCAATTAAACGCACAGTCAAGTGTTT
TTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCTGACCCGGA
GCGTTGGCAAGATAAGTGAACAGACAGACCTAAAACACATACACACAGATGACACCTAGA
CACCCTGTGCGTGGAAATGCAAAATGGCCTGGAATTGCAGCTGAACCATACGTCGGCCTA
ATGGTGGCGGCGCCCTTGAGTGGCCACGCTTGGCCAGCGGTCACGCGGGAACACTGGGGG
AGGCGTACCACACTTGACGAAGGGAACAAACTTCCAGTCGGAGCTCGAGGGGCAAGGCAG
CTAACTATACGTCATGTTACTAACGCNCCACCTTGGTGTTGTGACTAACTTGCGAATGAA
TGCCTTGGNAACCGAGCCTGGGGGCACACCCCTCGCGCAAGGGCCCGGCAACTGGAGAAC
CCAGGACTGGNGGAGGGTGGGTACAAACGNAANATGGGGGCGCGCGTACGGAACGTGGAC
AACCGAACACGCAGCGGGGGGCAATCTTCCTTGNGCACATGACANGAACGGACNGGTTCA
ACTCCGTGTNTTAATCCCCGACTTGGCTTGAAAAGNCTTGTCTCCCAGCAACAGGGACAT
TGGGCTGGACGGCGTAGAACCTGTGCTGCCCACNCAACGATAANCCNATGGNGG

consensusID : consensus_8370#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 344
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCCTCCGCCTCCGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACGATAAGCCCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAGCGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCG]

[+] EMBL BM580455             [CCGCGGACGCGTGGGCGGACGCGTGGGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCCTCCGCCTCCGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACGATAAGCCCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTTTTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAGCGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACCCGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCG]




>consensus_8370#3
CCGCGGACGCGTGGGCGGACGCGTGGGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCC
TCCGCCTCCGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACGATAAGC
CCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTT
TTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAGCGACCCGGAG
CGTTGGCAAGATAAGGAACAGACAGACCTAAAACACATACACACAGAGACACCTAGCACC
CGGCGTGGAAAGCAAAATGGCCGGAATGCAGCGAACCATCGTCG

consensusID : consensus_8370#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 217
fasta sequence

                              [AAGAAAAGCGCCCGGTGGTCAAGATTGGGCGCGTCNACTGCACGACCGACGGGGATCTCTGCACGCAGCACCACGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACTGCNCCACCAAGTACCGTGGGGTGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACNAGCAGCTGGCACCGGCGGCGGGCGACGGCCCGGC]

[+] EMBL BX627139             [AAGAAAAGCGCCCGGTGGTCAAGATTGGGCGCGTCNACTGCACGACCGACGGGGATCTCTGCACGCAGCACCACGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACTGCNCCACCAAGTACCGTGGGGTGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACNAGCAGCTGGCACCGGCGGCGGGCGACGGCCCGGC]




>consensus_8370#4
AAGAAAAGCGCCCGGTGGTCAAGATTGGGCGCGTCNACTGCACGACCGACGGGGATCTCT
GCACGCAGCACCACGTCACCGGCTACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCG
CGGACTGCNCCACCAAGTACCGTGGGGTGCGCGATCTCGCCCAGTTCAACGCGTTCCTGG
ACNAGCAGCTGGCACCGGCGGCGGGCGACGGCCCGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8370#2      ------------------------------------------------------------
consensus_8370#3      CCGCGGACGCGTGGGCGGACGCGTGGGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCC 60
consensus_8370#0      --GCCNTCTAGAGACCAGAGCTGACTGTGCAAGCGGAGGCTGTGGCAGTTGTGTGTTCCC 58
consensus_8370#1      -CGCGTGTCCAAGATCGACTGCACGCAGTACCGGCCGATCTGTACCGACTTCGAGGTGAA 59
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      ----------------------------------------------------------GA 2
consensus_8370#3      TCCGCCTCCGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACGATAAGC 120
consensus_8370#0      TCCGCCTCCGACGTGTGTGTGTGTGGGTGTATGT----------GTGTGACACGATAAGC 108
consensus_8370#1      AGGGCTACCCGACGCTGCTGTGGATCGAGGACGGCAAGAAGATCGAGAAGTACACGGGCC 119
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      GGTTTTTCATCGGCAAGCAAAGNGCGGC--CGCTGCAATTAAACGCACAGTCAAGTGTTT 60
consensus_8370#3      CCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTT 180
consensus_8370#0      CCTTTTCCATCGGCAAAGCAAAGGCGGCCCCGCTGCAATCAAACGCACAGTCAAGTGTTT 168
consensus_8370#1      CGCGCACGCACGCCGACCTGAAGCAGTACGTGGCGCGGATGGCCGGCGGGCTGAAGGAGG 179
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      TTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAG-CTGACCCGG 119
consensus_8370#3      TTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAG-C-GACCCGG 238
consensus_8370#0      TTAGTGAGATAAAACAGCCCCTGCAAAGCAAAGACAGTCCATCGGGCTAG-C-GACCCGG 226
consensus_8370#1      ACGGCGCCCAGGGCGCCGAGCCGAAGGGCGAGGGCACGCTGGAGGGTGGGGCCGAGTCGG 239
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      AGCGTTGGCAAGATAA--GTGAACAGACAGACCTAAAACACATACACACAGATGACACCT 177
consensus_8370#3      AGCGTTGGCAAGATAA--G-GAACAGACAGACCTAAAACACATACACACAGA-GACACCT 294
consensus_8370#0      AGCGTTGGCAAGATAA--G-GAACAGACAGACCTAAAACACATACACACAGA-GACACCT 282
consensus_8370#1      GACGACAACCGGTCGGTGGTGGTGCAGCTGTCCGAGGGCGACTTCGCGCACGCGATCGCG 299
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      AGACACCCTGTG-CGTGGAAATGCAAAATGGCCTGGAATTGCAGCTGAAC----CATACG 232
consensus_8370#3      AG-CACCCGG---CGTGGAAA-GCAAAATGGCCGGAA--TGCAGC-GAAC----CAT-CG 341
consensus_8370#0      AG-CACCCGG---CGTGGAAA-GCAAAATGGCCGGAA--TGCAGC-GAAC----CAT-CG 329
consensus_8370#1      AAGGGCGTGACGGTGGTGAAGTTCTACGCGCCCTGGTGCGGGCACTGCATGCGGCTCGCG 359
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      TCGGCCTAATGG----TGGCGGCGCCCTTGAGTGGCCACGCTTGGCCAGCGGTCACGCGG 288
consensus_8370#3      TCG--------------------------------------------------------- 344
consensus_8370#0      TCGGCCTAATGG----TGGCGGCCGCCCTGC-TGGCCACGCT-GGCCAGCGGTCACGCGG 383
consensus_8370#1      CCGACCTGGGAGCAGCTGGCGGAGAAGCTGACCGCCCGGGACGGGGTGACGATCGCGAAG 419
consensus_8370#4      ------------------------AAGAAAAGCGCCCGGT----GGTCAAGATTGGGCGC 32
                                                                                  

consensus_8370#2      GAACACTGGGGGAGGCGTACCACACTTGACGAAGGGAACAAACTTCCAGTCGGAGCTCGA 348
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      ACACGGCGAGCG--------TCCACCTGACGAAGGACA---ACTTCCAGTCGGAGCTCGA 432
consensus_8370#1      GTGGACTGCACGGTCGACGCGAACAAGGAGCTGTGCGGCGAGCAGGAGGTGAACGGGTAT 479
consensus_8370#4      GTCNACTGCACGACCGACG------GGGATCTCTGCACGCAGCACCACGTCACCGGCTAC 86
                                                                                  

consensus_8370#2      GGGGCAAGGCAGCTA-------ACTATACGTC-----ATGTTACTAACGCNCCACCTTGG 396
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      GGGCAGCAGCTACTTCGTCAT-GTTCTACGCCCCCTGGTGTGACTACTGCAAGAAGCTGG 491
consensus_8370#1      CCGACCGTCTTCCTGTACCGCGACGGCGAGAAGGTGACCGAGTACTTCGGGCACCGGTCG 539
consensus_8370#4      CCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACTGCNCCACCAAGTACCGTGGG 146
                                                                                  

consensus_8370#2      TGT-----TGTGACTAACTTGCGAATGAATGCCTTGGNAACCGAGCCTGGGGGCACACCC 451
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      CACCGACCTGGGCCACCCTCGCGAAGGCCCGCAACGGCGACCCGGACGGGGTGGTCAAGA 551
consensus_8370#1      CTCGACGATCTGCACGAGTTCGTGATGCAGCATCTGCAGGACAATGGGCCGCACGATGAG 599
consensus_8370#4      GTGCGCGATCTCGCCCAGTTCAAC-----GCGTTCCTGGACNAGCAGCTGGCACCGGCGG 201
                                                                                  

consensus_8370#2      CT---CGCG-CAAGGGCCCGGCAACTGGAGAACCCAGGAC-TGGNGGAGGGTGGGTACAA 506
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      TTGGGCGCGTCGACTGCACGACCGACGGGGATCTCTGCACGCAGCACGACGTCACCGGCT 611
consensus_8370#1      CTGTAAAAGACAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAAGTAGAGGGAAAAGTTCT 659
consensus_8370#4      CGGGCGACGGCCCGGC-------------------------------------------- 217
                                                                                  

consensus_8370#2      ACGNAANATGGGGGC------GCGCGTACGG-AACGTGGACAAC-CGAACACGCAGCGGG 558
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      ACCCGATGCTGAAGCTGTTCCGCAAGGATGGTGGCGCGGACGGCGCCACCAAGTACCGTG 671
consensus_8370#1      ATCCGATTCCGATGTTCCGATGCATTTACTTCGTCGTAGCGGAGTTTGCAGGGGCAGTGG 719
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      GGGCAATCTTCCTTGNGCACAT-GACANGAACGGACNGGTTCAACTCCGTGTNTTAATCC 617
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      GGGCGCGCGATCTCGCCCAGTTCAACGCGTTCCTGGACGAGCAGCTGGCACCGGCGGCGG 731
consensus_8370#1      GTCCGTCTTTTATTTTTTAAACCGATAAAGACACGAATGTGTACGTGTTTGTGTGTGCGT 779
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      CCGACTTGGCTTGAAAAGNCTTGTCTCCCAGCAACAGGGACATTGGGCTGGACGGCGTAG 677
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      GCGACGGCCCGGCCAAGGGCGCCGACCGGGACGGCGAGGACGGTGCGCAGGAGGATGGCG 791
consensus_8370#1      GTGTGTGAGTGTACGTCAGATAATGGTCTATCACTTCGTTAAACTTCAATAAAGGCGTGC 839
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      AACCTGTGC-TGCCCACNCAACGATAANCCNATGGNGG---------------------- 714
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      GGCAGGCGGACGCCCCGCCCGCCCCGGTCTCGCCGCTGACCGAGCTGACCGAGGACACGT 851
consensus_8370#1      TGCCCCTTAGTGAGCGTCGCTCGGGGTAATGATAAAAAACCCACGCGTCCGCGG------ 893
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      ------------------------------------------------------------
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      TCGCGAAGCACGTCTCGAGCGGCAAGCACTTCGTCAAGTTCTACGCGCCCTGGTGCGGNC 911
consensus_8370#1      ------------------------------------------------------------
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      ------------------------------------------------------------
consensus_8370#3      ------------------------------------------------------------
consensus_8370#0      ACTGCACCAAGCTCGCGCCGACCTGGGANGAGCTGGCCCGCAGCCTCGAGCACGAGCGGG 971
consensus_8370#1      ------------------------------------------------------------
consensus_8370#4      ------------------------------------------------------------
                                                                                  

consensus_8370#2      ------------------------------------------------
consensus_8370#3      ------------------------------------------------
consensus_8370#0      ACATCCGCGTGTCCAANATCGACTGCACGCAGTACCGGNCGATCTGTA 1019
consensus_8370#1      ------------------------------------------------
consensus_8370#4      ------------------------------------------------