cluster # 8387

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Anopheles gambiae
cluster # 8387 cluster # 8387 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8387#0 length = 1407 sequences # 4
consensus_8387#1 length = 978 sequences # 3

consensus_8387#2 length = 775 sequences # 2
consensus_8387#3 length = 176 sequences # 1

consensusID : consensus_8387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1407
fasta sequence

                              [TGGCCAAACACGTATTTGCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGTTTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGCTGGTCGTGGATGCTGCACTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAACCACTGTTTCGACGAGACGAAGGATGGTCGCTTGCCGGTGATGACAGTCGGCGACTGGCTGCCGAGAGACATCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTGTACGCTGCCTTCTACTACAGTCTGTTCCTGTCCAAGAAGGAACCGGTCGATGTCGTGTTTTGCGATTTGATTTCGCTAGGCATTCCCATTTTTCGACTCGCCAGGCCCAACCCAAAGATCCTGTTCTACTGTCACTACCCCGACCAGCTGCTTTCGAAGCCGGGCAACCTGCTGAAACAGTGCTACCGCATGCCGCTCAACTACCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAGTTCACCAGCCGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAACCGACCCGGATGTGCTGTATCCGTCGCTAAACACCAGGTTCTTTGACGAAACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCAATCGGTACGAGCGGAAGAAAAACCTTGCGCTCGCTTTGCACGCCTTCAAGGCGTTGCAGGACCTGGTGTCCTCTAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCGGCGGGTATGACGATCGCGTGATGGAAAACGTGGAACATTACGACGAACTGGAGGAGCTGGCCGAAGACATGCAGATACCGGCCAAAGTGCGCCTGCTACGATCTCCGACCGATCGTCAAAAGCTGTTCCTACTGCATCGTGCCCAAGCGCTAATTTACACGCCCGAGTTCGAGCACTTCGGAATCGTTCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATCATTCACGAGCAGACGGGCTTTTTGTGCGAACCCGTGCCGAAGGAGTTTGCCGCCGCAATGGCAAAGCTGGTGAGAGACGACAAGCACTGCGAACGCATGGGTGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGCGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAATG]

[+] EMBL CNS09DV2             [TGGCCAAACACGTATTTGCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGTTTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGCTGGTCGTGGATGCTGCACTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAACCACTGTTTCGACGAGACGAAGGATGGTCGCTTGCCGGTGATGACAGTCGGCGACTGGCTGCCGAGAGACATCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTGTACGCTGCCTTCTACTACAGTCTGTTCCTGTCCAAGAAGGAACCGGTCGATGTCGTGTTTTGCGATTTGATTTCGCTAGGCATTCCCATTTTTCGACTCGCCAGGCCCAACCCAAAGATCCTGTTCTACTGTCACTACCCCGACCAGCTGCTTTCGAAGCCGGGCAACCTGCTGAAACAGTGCTACCGCATGCCGCTCAACTACCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAGTTCACCAGCCGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAACCGACCCGGATGTGCTGTATCCGTCGCTAAACACCAGGTTCTTTGACGAAACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCAATCGGTACGAGCGGAAGAAAAACCTTGCGCTCGCTTTGAACGCCTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX601678             [                                                                                                                                                                                                                                                                                                                                                                        TTGCGATTTGATTTCGCTAGGAATTCCCATTTTTCGACTCGCAAGGCCCAACCCAAAAATCCTGTTCTACTGTCACTACCCCGACCAGCTGCTGTCGAAGCCGGGCAACCTGCTGAAACAGTGCTACCGCATGCCGCTCAACTACCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAGTTCACCAGCCGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAACCGATCCGGATGTGCTGTACCCGTCGCTAAACACCCGGTTCTTTGACGACACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCAATCGGTACGAGCGGAAGAAAAACCTTGCGCTCGCTTTGCACGCCTTCAAGGCGTTGCAGGACCTGGTGTCCTCTAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCGGCGGGTATGACGATCGCGTGATGGAAAACGTGGAACATTACGACGAACTGGAGGAGCTGGCCGAAGACATGCAGATACCGGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX628192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCGCTTTGCACGCCTTCAAGGCGTTGCAGGACATGGTGTCCTCGAGCGAGTGGCACAAGGTGTGTCTCATCATGGCCGGCGGGTATGACGATCGCGTGATGGAAAACGTGGAACATTACGACGAACTGGAGGAGCTGGCCGAAGACATGCAGATACGGGCCAAAGTGCGCCTGCTACGATCTCCGACCGATCGTCAAAAGCTGTTCCTACTGCATCGTGCCCAAGCGCTAATTTACACGCCCGAGTTCGAGCACTTCGGAATCGTTCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATCATTCACGAGCAGACGGGCTTTTTGTGCGAACCCGTGCCGAAGGAGTTTGCCGCCGCAATGGCAAAGCTGGTGAGAGACGACAAGCACTGCGAACGCATGGGTGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGCGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAATG]
[+] EMBL BM597432             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAGCTGTTCCTATTGCATCGTGCAAAAGCGCTAATTTACACGCCCGAGTTCGAGCACTTCGGAATCGTTCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATCATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTACCGAAGGAGTTTGCCGCCGCAATGGCAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGCGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACACTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCG      ]




>consensus_8387#0
TGGCCAAACACGTATTTGCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGT
GCGTGTACTGTTTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGCTGGTCGTGGA
TGCTGCACTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGA
TCCGAACCACTGTTTCGACGAGACGAAGGATGGTCGCTTGCCGGTGATGACAGTCGGCGA
CTGGCTGCCGAGAGACATCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCT
GTACGCTGCCTTCTACTACAGTCTGTTCCTGTCCAAGAAGGAACCGGTCGATGTCGTGTT
TTGCGATTTGATTTCGCTAGGCATTCCCATTTTTCGACTCGCCAGGCCCAACCCAAAGAT
CCTGTTCTACTGTCACTACCCCGACCAGCTGCTTTCGAAGCCGGGCAACCTGCTGAAACA
GTGCTACCGCATGCCGCTCAACTACCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCAT
CCTGGTGAACAGCAAGTTCACCAGCCGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAAC
CGACCCGGATGTGCTGTATCCGTCGCTAAACACCAGGTTCTTTGACGAAACCGCCATCGA
AGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCAATCG
GTACGAGCGGAAGAAAAACCTTGCGCTCGCTTTGCACGCCTTCAAGGCGTTGCAGGACCT
GGTGTCCTCTAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCGGCGGGTATGACGATCG
CGTGATGGAAAACGTGGAACATTACGACGAACTGGAGGAGCTGGCCGAAGACATGCAGAT
ACCGGCCAAAGTGCGCCTGCTACGATCTCCGACCGATCGTCAAAAGCTGTTCCTACTGCA
TCGTGCCCAAGCGCTAATTTACACGCCCGAGTTCGAGCACTTCGGAATCGTTCCGCTGGA
GGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCAT
CATTCACGAGCAGACGGGCTTTTTGTGCGAACCCGTGCCGAAGGAGTTTGCCGCCGCAAT
GGCAAAGCTGGTGAGAGACGACAAGCACTGCGAACGCATGGGTGCCATGGGGCGGAAGCG
CGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGA
TCTGATTCAGCGGGATGGCGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTC
CACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGAT
GTTTGCATTTCCAGTGGGGCGATAATG

consensusID : consensus_8387#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 978
fasta sequence

                              [CTGTTGGCCTACTGGTGGTGTCCGCGAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCGGCGGGTATGACGATCGTGTGATGGAAAACGTGGAACATTATGACGAGCTGGAGGAGCTGGCAGAAGACATGCAGATACGAGCCAAAGTGCGCCTGCTACGATCTCCCACCGATCGTCAAAAGCTGTTCCTATTGCATCGTGCCCAAGCGCTGGTTTACACACCCGAGTTCGAGCACTTCGGAATCGTCCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATAATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTGCCGAAGGAGTTTGCCGCCGCAATGGCAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGCGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAAAATGGCGGCCGCACAAACCCGATGGCAAAGAATTTCGATGTAAATTGCGTATCTCTCCGACCGGCCAGTCGGTCGGTCACTTATTAATTACACAGTCCATGATATCTTAATGCACGTAGTAG-TCGATGCTTAACAATAATAATAATAAGCGCCATTAGTCCCGGTAGTGTTGTACGAGTTGTAGTTGATGTTTTAGCACATTCTCAAATAAAATTCCAAAGTAAGGAGCCTCTTTCGACCGCATCGATGGGCCATGTTCGTCCGCGATGGTAAAGAATTAGGCATTTTGAATTCATTCAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCAGGG]

[-] EMBL CNS08U39             [CTGTTGGCCTACTGGTGGTGTCCGCGAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCGGCGGGTATGACGATCGTGTGATGGAAAACGTGGAACATTATGACGAGCTGGAGGAGCTGGCAGAAGACATGCAGATACGAGCCAAAGTGCGCCTGCTACGTTCTCCCACCGATCGTCAAAAGCTGTTCCTATTGCATCGTGCCCAAGCGCTGGTTTACACACCCGAGTTCGAGCACTTCGGAATCGTCCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATAATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTGCCGAAGGAGTTTGCCGCCGCAATGGCAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGCGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAAAATGGCGGCCGCACAAACCCGATGGCAAAGAATTTCGATGTAAATTGCGTATCTCTCCGACCGGCCAGTCGGTCGGTCACTTATTAATTACACAGTCCATGATATCTTAATGCACGTAGTAG TCGATGCTTAACAATAATAATAATAAGCGCCATTAGTCCCGGTAGTGTTGTACGAGTTGTAGTTGATGTTTTAGCACATTCTCAAATAAAATTCCAAAGTAAGGAGCCTCTTTCGACCGCATCGATGGGCCATGTTCGTCCGCGATGG                                                                   ]
[+] EMBL CNS08U38             [                                   tgaAATGTGTGT TCATTATGGCCGGCGGGTATGACGATCGTGTGATGGAAAACGTGGAACATTATGACGAGCTGGAGGAGCTGGCAGAAGACATGCAGATACGAGCCAAAGTGCGCCTGCTACGATCTCCCACCGATCGTCAAAAGCTGTTCCTATTGCATCGTGCCCAAGCGCTGGTTTACACACCCGAGTTCGAGCACTTCGGAATCGTCCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATCATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTGCCGAA GAGTTTGCCGCCGCAATGGCAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGCGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAAAATGGCGGCCGCACAAACCCGATGGCAAAGAATTTCGATGTAAATTGCGTATCTCTCCGACCGGCCAGTCGGTCGGTCACTTATTAATTACACAGTCCATGATATCTTAATGCACGTAGTAGTTCGATGCTTAACAATAATAATAATAAGCGCCATTAGTCCCGGTAGTGTTGTACGAGTTGTAGTTGATGTTTTAGCACATTCTCAAATAAAATTCCAAAGTAAGGAGCCTCTTTCGACCGCATCGATGGGCCATGTTCGTCCGCGATGGTAAAGAATTAGGCATTTTGAATTCATTCAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCAGGG]
[-] EMBL CNS09DV3             [                                                                                                                                                               GATCTCCCACCGATCGTCAAAAGCTTTTCCTATTGCATCGTGCCCAAGCGCTGGTTTACACACCCGAGTTCGAGCACTTCGGAATCGTCCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCGGACCGATGGAGACCATAATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTGCCGAAGGAGTTTGCCGCCGCAATGACAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGCGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAAAATGGCGGCCGCACAAACCCGATGGCAAAGAATTTCGATGTAAATTGCGTATCTCTCCGACCGGCCAGTCGGTCGGTCACTTATTAATTACACAGTCCATGATATCTTTATGCACGTAGTAG TCGATGCTTAACAATAATAATAATAAGCGCCATTAGTCCCAGTAGTGTTGTACGAGTTGTAGTTGATGTTTTAGCACATTCTCAAATAAAATTCCAAAGTAAGGAGCCTCTTTCGACCGCATCGATGGGCCATGTTCGTCCGCGATGGTAAAGAATTAGGCATTTT                                                 ]




>consensus_8387#1
CTGTTGGCCTACTGGTGGTGTCCGCGAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCG
GCGGGTATGACGATCGTGTGATGGAAAACGTGGAACATTATGACGAGCTGGAGGAGCTGG
CAGAAGACATGCAGATACGAGCCAAAGTGCGCCTGCTACGATCTCCCACCGATCGTCAAA
AGCTGTTCCTATTGCATCGTGCCCAAGCGCTGGTTTACACACCCGAGTTCGAGCACTTCG
GAATCGTCCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGCG
GACCGATGGAGACCATAATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTGCCGAAGG
AGTTTGCCGCCGCAATGGCAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGCG
CCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTGG
ACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGGT
GGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGACT
ACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAAAATGGCGGCCGCACAAACC
CGATGGCAAAGAATTTCGATGTAAATTGCGTATCTCTCCGACCGGCCAGTCGGTCGGTCA
CTTATTAATTACACAGTCCATGATATCTTAATGCACGTAGTAGTCGATGCTTAACAATAA
TAATAATAAGCGCCATTAGTCCCGGTAGTGTTGTACGAGTTGTAGTTGATGTTTTAGCAC
ATTCTCAAATAAAATTCCAAAGTAAGGAGCCTCTTTCGACCGCATCGATGGGCCATGTTC
GTCCGCGATGGTAAAGAATTAGGCATTTTGAATTCATTCAAAAAAAAAAAAAAGGCCACA
TGTGCCCGAGCTGCAGGG

consensusID : consensus_8387#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 775
fasta sequence

                              [CCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGTTTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGCTGGTCGTGGATGCTGCACTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAACCACTGTTTCGACGAGACGAAGGATGGTCGCTTGCCGGTAATGACGGTCGGCGACTGGCTGCCGAGAGACATCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTGTACGCTGCCTTCTACTACAGTCTGTTCCTGTCCAA-GAAGGAACCGGTCGATGTCGTGTTTTGCGATTTGA-TTTCGCTAGGAATTCCCATTTTTCGACTCGCAAGGCCCAACCCAAAGATCCTGTTCTACTGTCACTA-CCCGGATCAGCTGCTGTC-AAAGCCAGGCAACCTGCTGAAACAGTGCTACCGCATGCCGCTCAACTACCCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAGTTCACCAGCCGGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAACCCGATCCGGATGTGCTGTACCCGTCGCTAAACACCCGGTTCTTTGAC-GAAACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCGAGAGTGCGGGTACGAAGCCGGGAAGAAAAAAAACCCCTTGGGCCACCTCCGCCCTTTTNGNCCACCGCCCCCT]

[+] EMBL BM579997             [CCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGTTTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGCTGGTCGTGGATGCTGCACTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAACCACTGTTTCGACGAGACGAAGGATGGTCGCTTGCCGGTAATGACGGTCGGCGACTGGCTGCCGAGAGACATCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTGTACGCTGCCTTCTACTACAGTCTGTTCCTGTCCAA GAAGGAACCGGTCGATGTCGTGTTTTGCGATTTGA TTTCGCTAGGAATTCCCATTTTTCGACTCGCAAGGCCCAACCCAAAGATCCTGTTCTACTGTCACTA CCCGGATCAGCTGCTGTC AAAGCCAGGCAACCTGCTGAAACAGTGCTACCGCATGCCGCTCAACTACCCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAGTTCACCAGCCGGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAACCCGATCCGGATGTGCTGTACCCGTCGCTAAACACCCGGTTCTTTGAC GAAACCGCCATCGAAGAGTCCGACCAGGT                                                                                                                  ]
[+] EMBL BX619812             [                                                                                                                                                                                                                              nCTGGCTGCCGAGGGACATCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTGTACGCTGCCTTCTACTACAGTCTGTTCCTGTCCAAGGAAGGAACCGGTCGATGTCGTGTTTTGCGATTTGANNTTCGCTAGGCATTCCCATTTTTCGACTCGCCAGGCCCAACCCAAANNTCCTGTTCTACTGTCACTACCCCGNACCAGCTGCTGTCGAAAGCCGGGCAACCTGCTGAAACAGTGCTACCGCATGCCGCTCAACTA CCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAGTTCACCAGCC GCGTGTTTAAGGAAACGTTCAAGCGCATCGCAA CCGATCCGGATGTGCTGTACCCGTCGCTAAACACCCGGTTCTTTGACGGAAACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCGAGAGTGCGGGTACGAAGCCGGGAAGAAAAAAAACCCCTTGGGCCACCTCCGCCCTTTTNGNCCACCGCCCCCT]




>consensus_8387#2
CCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGTTTGTTC
ATCCGGATCTGGGCATTGGCGGTGCGGAACGGCTGGTCGTGGATGCTGCACTGGCTTTGC
AGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAACCACTGTTTCG
ACGAGACGAAGGATGGTCGCTTGCCGGTAATGACGGTCGGCGACTGGCTGCCGAGAGACA
TCTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTGTACGCTGCCTTCTACT
ACAGTCTGTTCCTGTCCAAGAAGGAACCGGTCGATGTCGTGTTTTGCGATTTGATTTCGC
TAGGAATTCCCATTTTTCGACTCGCAAGGCCCAACCCAAAGATCCTGTTCTACTGTCACT
ACCCGGATCAGCTGCTGTCAAAGCCAGGCAACCTGCTGAAACAGTGCTACCGCATGCCGC
TCAACTACCCTCGAGGAAGTGACTACGGCCCAGGCCGATGGCATCCTGGTGAACAGCAAG
TTCACCAGCCGGCGTGTTTAAGGAAACGTTCAAGCGCATCGCAACCCGATCCGGATGTGC
TGTACCCGTCGCTAAACACCCGGTTCTTTGACGAAACCGCCATCGAAGAGTCCGACCAGG
TGGTGAAGCTACCGAACGACGCGTTCGTCTTCCTGTCCATCGAGAGTGCGGGTACGAAGC
CGGGAAGAAAAAAAACCCCTTGGGCCACCTCCGCCCTTTTNGNCCACCGCCCCCT

consensusID : consensus_8387#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 176
fasta sequence

                              [CGGTCGGCGACTGGCTGCCGAGGGACATCTGTGGCAAGTAAAACGCCGGGTGCGCCTACATACGCAGGCTGTACGCTGCCTGCTACTACAGTCTGTGCCTGTCCAAGAAGGAACCGGTCGATGTCGTGTCGGGCGATAAGAAACCGCCAGGCATGCCCATAAACCGACTCGCCAGG]

[+] EMBL BX612288             [CGGTCGGCGACTGGCTGCCGAGGGACATCTGTGGCAAGTAAAACGCCGGGTGCGCCTACATACGCAGGCTGTACGCTGCCTGCTACTACAGTCTGTGCCTGTCCAAGAAGGAACCGGTCGATGTCGTGTCGGGCGATAAGAAACCGCCAGGCATGCCCATAAACCGACTCGCCAGG]




>consensus_8387#3
CGGTCGGCGACTGGCTGCCGAGGGACATCTGTGGCAAGTAAAACGCCGGGTGCGCCTACA
TACGCAGGCTGTACGCTGCCTGCTACTACAGTCTGTGCCTGTCCAAGAAGGAACCGGTCG
ATGTCGTGTCGGGCGATAAGAAACCGCCAGGCATGCCCATAAACCGACTCGCCAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      ------------------------------------------------------------
consensus_8387#1      CTGTTGGCCTACTGGTGGTGTCCGCGAGCGAGTGGCACAAGGTGTGTCTCATTATGGCCG 60
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      ------------------------------------------------------------
consensus_8387#1      GCGGGTATGACGATCGTGTGATGGAAAACGTGGAACATTATGACGAGCTGGAGGAGCTGG 120
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      -------------------------------------------------TGGCCAAACAC 11
consensus_8387#1      CAGAAGACATGCAGATACGAGCCAAAGTGCGCCTGCTACGATCTCCCACCGATCGTCAAA 180
                                                                                  

consensus_8387#2      ------CCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGT 54
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      GTATTTGCGGTTTTCGCCGTCGACAGGGGCATTTTTTCACAGACATGGTGCGTGTACTGT 71
consensus_8387#1      AGCTGTTCCTATTGCATCGTGCCCAAGCGCTGGTTTACACACCCG-AGTTCGAGCACTTC 239
                                                                                  

consensus_8387#2      TTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGC----TGGTCGTGGATGCTGCA 110
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      TTGTTCATCCGGATCTGGGCATTGGCGGTGCGGAACGGC----TGGTCGTGGATGCTGCA 127
consensus_8387#1      GGAATCGTCCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAGTGGC 299
                                                                                  

consensus_8387#2      CTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAAC 170
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CTGGCTTTGCAGAGCAAGGGCCACACGGTCAGCTTTCTGACGAACCATCACGATCCGAAC 187
consensus_8387#1      GGACCGATGGAGACCATAATTCACGAGCAGACGGGCTTTTTGTGCGAGCCCGTGCCGAAG 359
                                                                                  

consensus_8387#2      CACTGTTTCGACGAGACGA-AGGATGGTCGCTTGCCGGTAATGACGGTCGGCGACTGGCT 229
consensus_8387#3      --------------------------------------------CGGTCGGCGACTGGCT 16
consensus_8387#0      CACTGTTTCGACGAGACGA-AGGATGGTCGCTTGCCGGTGATGACAGTCGGCGACTGGCT 246
consensus_8387#1      GAGTTTGCCGCCGCAATGGCAAAGCTGGTGCGAGACGACAAGCACTGCGAACGCATGGGC 419
                                                                  * *    **  ***  

consensus_8387#2      GCCGAGAGACAT-----CTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTG 284
consensus_8387#3      GCCGAGGGACAT-----CTGTGGCAAGTAAAACGCCGGGTGCGCCTACATACGCAGGCTG 71
consensus_8387#0      GCCGAGAGACAT-----CTTTGGCAAGTTTTACGCCGTGTGCGCCTACATACGCATGCTG 301
consensus_8387#1      GCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAAGCTG 479
                      ***  * * *       *  *    **       **      ** * **    ** ****

consensus_8387#2      TAC---GCTGCCTTCTACTACAGTCTGTTC--CTGTCCAAGAAGG---AACCGGTCGATG 336
consensus_8387#3      TAC---GCTGCCTGCTACTACAGTCTGTGC--CTGTCCAAGAAGG---AACCGGTCGATG 123
consensus_8387#0      TAC---GCTGCCTTCTACTACAGTCTGTTC--CTGTCCAAGAAGG---AACCGGTCGATG 353
consensus_8387#1      GACAACGTTGTGACCGATCTGATTCAGCGGGATGGTGAGAAAAAGTTCAAATAGCATAGG 539
                       **   * **    * *    * ** *       **   * ** *   **   *   * *

consensus_8387#2      TCGTGTTTTGCGATTTGATTTCGCTAGGAATTCC----CATTTTTCGACTCG-CAAGGCC 391
consensus_8387#3      TCGTGTCGGGCGATAAGAAACCGCCAGGCATGCC----CATAAACCGACTCG-CCAGG-- 176
consensus_8387#0      TCGTGTTTTGCGATTTGATTTCGCTAGGCATTCC----CATTTTTCGACTCG-CCAGGCC 408
consensus_8387#1      TGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTGTGAC 599
                      * ***      * *       *    **    **    **      ** *** *   *  

consensus_8387#2      CAACCCAAAGATCCTGTTCTACTGTCACTACCCGGATCAGCTGCTGTCAAAGCCAGGCAA 451
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CAACCCAAAGATCCTGTTCTACTGTCACTACCCCGACCAGCTGCTTTCGAAGCCGGGCAA 468
consensus_8387#1      TACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAAAATGGCGGCCGCACAAAC 659
                                                                                  

consensus_8387#2      CCTGCTG-AAACAGTGCTACCGCATGCCGCTCAACTACCC-TCGAGGAAGTGACTACGGC 509
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CCTGCTG-AAACAGTGCTACCGCATGCCGCTCAACTACC--TCGAGGAAGTGACTACGGC 525
consensus_8387#1      CCGATGGCAAAGAATTTCGATGTAAATTGCGTATCTCTCCGACCGGCCAGTCGGTCGGTC 719
                                                                                  

consensus_8387#2      CCAGGCCGATGGCATCCTGGTGAACAGCA-AGTTCACCAGCCGGCGTGTTTAAGGAAACG 568
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CCAGGCCGATGGCATCCTGGTGAACAGCA-AGTTCACCAGCCG-CGTGTTTAAGGAAACG 583
consensus_8387#1      ACTTATTAATTACACAGTCCATGATATCTTAATGCACGTAGTAGTCGATGCTTAACAATA 779
                                                                                  

consensus_8387#2      TTCAAGCGCATCGCAACCCGATCCGGATGTGCTGTAC---CCGTCGCTAAACACCCGGTT 625
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      TTCAAGCGCATCGCAACC-GACCCGGATGTGCTGTAT---CCGTCGCTAAACACCAGGTT 639
consensus_8387#1      ATAATAATAAGCGCCATTAGTCCCGGTAGTGTTGTACGAGTTGTAGTTGATGTTTTAGCA 839
                                                                                  

consensus_8387#2      CTTTGACGAAACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTT 685
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CTTTGACGAAACCGCCATCGAAGAGTCCGACCAGGTGGTGAAGCTACCGAACGACGCGTT 699
consensus_8387#1      CATTCTCAAATAAAATTCCAAAGTAAGGAGCCTCTTTCGACCGCATCGATGGGCCATGTT 899
                                                                                  

consensus_8387#2      CGTCTTCCTGTCCATCGAGAGTGCGGGTACGAAGCCGGGAAGAAAAAAAACCCCTTGGGC 745
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CGTCTTCCTGTCCATCAATCGGTACGAGCGGAAGAAAAACCTTGCGCTCGCTTTGCACGC 759
consensus_8387#1      CGTCCGCGATGGTAAAGAATTAGGCATTTTGAATTCATTCAAAAAAAAAAA---AAAGGC 956
                                                                                  

consensus_8387#2      CACCTCCGCCCTTTTNGNCCACCGCCCCCT------------------------------ 775
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CTTCAAGGCGTTGCAGGACCTGGTGTCCTCTAGCGAGTGGCACAAGGTGTGTCTCATTAT 819
consensus_8387#1      CACATGTGCCCGAGCTGCAGGG-------------------------------------- 978
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      GGCCGGCGGGTATGACGATCGCGTGATGGAAAACGTGGAACATTACGACGAACTGGAGGA 879
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      GCTGGCCGAAGACATGCAGATACCGGCCAAAGTGCGCCTGCTACGATCTCCGACCGATCG 939
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      TCAAAAGCTGTTCCTACTGCATCGTGCCCAAGCGCTAATTTACACGCCCGAGTTCGAGCA 999
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      CTTCGGAATCGTTCCGCTGGAGGGAATGTACCTTTCGAAGCCCGTCATTGCCGCCAACAG 1059
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      TGGCGGACCGATGGAGACCATCATTCACGAGCAGACGGGCTTTTTGTGCGAACCCGTGCC 1119
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      GAAGGAGTTTGCCGCCGCAATGGCAAAGCTGGTGAGAGACGACAAGCACTGCGAACGCAT 1179
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      GGGTGCCATGGGGCGGAAGCGCGTTCAGCAGCGCTTTTCCTTCGAAGCGTTCAGCACCAA 1239
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      GCTGGACAACGTTGTGACCGATCTGATTCAGCGGGATGGCGAGAAAAAGTTCAAATAGCA 1299
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------------------
consensus_8387#3      ------------------------------------------------------------
consensus_8387#0      TAGGTGGTGCCTGTTGCTTTCCACCCTGTTGGCGATCCATGGCACGCCCGGATTCGGCTG 1359
consensus_8387#1      ------------------------------------------------------------
                                                                                  

consensus_8387#2      ------------------------------------------------
consensus_8387#3      ------------------------------------------------
consensus_8387#0      TGACTACCCATGGCAACCGATGTTTGCATTTCCAGTGGGGCGATAATG 1407
consensus_8387#1      ------------------------------------------------