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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8403#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1385 fasta sequence
[TGCAGCAGATAGCCCAGGCTTATTGAGATGCTGCAACTAAAANAATAGAATAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACTGCCGTCTTTATGTAGCATATGCACAAATATAGATCTTGCTCGTTGCAAGTGAGACTATGGCTATGGAGATATTCCAAAAATACTNAGGCTTAGCTGACATGATCANATNACCCAGCCCGTTGCATAGTGATAACNGGTCTTATATCAACTTGGCGTACTGGGNGATTAGTNCCCCGNAAATCCTTCCCCATTGNAACNGNAGNTNTACTCAATACCTAACCACAAAGTTGGAATNTACACCCTGTGGCATGGTCCCCTGGCAACCCACGGGCACGCCTNGACCACGGCCAGGGGTATCCCCCGGGNAGTAACGTGGGANTAAAAGGNCTTGGCCACANCAGCGAANCAATCCCCGACTAACCACGGGGGCGNCCGTAACCANAACAACGACCAACTTGGCNCCTCCANAAACGTCCGACATTGGNAAGNACCCAACACAACCNGACGNCCCGCACGCATGGCCTAGCGCAACAACGCCGGGACCAACCATANGGNAGANCAACGAGAAACCCANGGCCNTGACTACACAACCACCCTTCCCGTTACCCCCCCACAACGCGCACACNAAAGACTAACCACGAACAGCACACTGGGCCNTCCTGGCACCNACGAAAGCACAGGNCTGACCAATGTACACCTCCCATNNAAACCTCAACCCAANCACAAAAANCANCCGATTACCCCCTCAATATAGCGACAAAACNGCACGCCNAATCAACAANTAACCCGANCAACCAAAGACCCACCCAGNGAGCCCCACAGCGCCAAAANTAAACNANNAAGGACTACCCCAATGGGGCACAACCACAGAGGCACCACNGCCAAANCGGACAACACATGATGCCCTNAGGGGAGCAGACCTCNGGGGCNACTAGGGNACNGGAGCCACCCCGAACACCCCCAGGGAGGCCNANCGANCGACACACAANGGGCCGGCAAAACACAAAACCNGGAGNGCACAACCACAGCCATAAGGGCCCAGGACCCAACCAACAACGGAACANAACCCGGAANAAAANNGGCATNGAAAAACAACAACACCCCACAACCANAGCCCAGCACCGCACACGGCCAGAGGGCACGGCCGAACGNANCGCCGGCCACACNCANAACNACACCNAACAANCANGGCAAANCACGCACAGGGAGCAGAACNGAGCCGCAGGCCACCTAACACNGACNAACCAAAGCGGGGAACACTATAAANCNAAACCCCNACCCCGANCCAACCAGAAAGGGAAGACGAAAAAAAGAAAGCAGAACGAANGANACTAAAAACGCAAAAC]
[+] EMBL AL693231 [TGCAGCAGATAGCCCAGGCTTATTGAGATGCTGCAACTAAAANAATAGAATAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACTGCCGTCTTTATGTAGCATATGCACAAATATAGATCTTGCTCGTTGCAAGTGAGACTATGGCTATGGAGATATTCCAAAAATACTNAGGCTTAGCTGACATGATCANATNACCCAGCCCGTTGCATAGTGATAACNGGTCTTATATCAACTTGGCGTACTGGGNGATTAGTNCCCCGNAAATCCTTCCCCATTGNAACNGNAGNTNTACTCAATACCTAACCACAAAGTTGGAATNTACACCCTGTGGCATGGTCCCCTGGCAACCCACGGGCACGCCTNGACCACGGCCAGGGGTATCCCCCGGGNAGTAACGTGGGANTAAAAGGNCTTGGCCACANCAGCGAANCAATCCCCGACTAACCACGGGGGCGNCCGTAACCANAACAACGACCAACTTGGCNCCTCCANAAACGTCCGACATTGGNAAGNACCCAACACAACCNGACGNCCCGCACGCATGGCCTAGCGCAACAACGCCGGGACCAACCATANGGNAGANCAACGAGAAACCCANGGCCNTGACTACACAACCACCCTTCCCGTTACCCCCCCACAACGCGCACACNAAAGACTAACCACGAACAGCACACTGGGCCNTCCTGGCACCNACGAAAGCACAGGNCTGACCAATGTACACCTCCCATNNAAACCTCAACCCAANCACAAAAANCANCCGATTACCCCCTCAATATAGCGACAAAACNGCACGCCNAATCAACAANTAACCCGANCAACCAAAGACCCACCCAGNGAGCCCCACAGCGCCAAAANTAAACNANNAAGGACTACCCCAATGGGGCACAACCACAGAGGCACCACNGCCAAANCGGACAACACATGATGCCCTNAGGGGAGCAGACCTCNGGGGCNACTAGGGNACNGGAGCCACCCCGAACACCCCCAGGGAGGCCNANCGANCGACACACAANGGGCCGGCAAAACACAAAACCNGGAGNGCACAACCACAGCCATAAGGGCCCAGGACCCAACCAACAACGGAACANAACCCGGAANAAAANNGGCATNGAAAAACAACAACACCCCACAACCANAGCCCAGCACCGCACACGGCCAGAGGGCACGGCCGAACGNANCGCCGGCCACACNCANAACNACACCNAACAANCANGGCAAANCACGCACAGGGAGCAGAACNGAGCCGCAGGCCACCTAACACNGACNAACCAAAGCGGGGAACACTATAAANCNAAACCCCNACCCCGANCCAACCAGAAAGGGAAGACGAAAAAAAGAAAGCAGAACGAANGANACTAAAAACGCAAAAC]
consensusID : consensus_8403#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1172 fasta sequence
[GCACATGTCTGCCTTGTTNNATATGATTGGCGATGCTGTTACAGAATAGTTTATTTACACGCTGAATAACATTTTTAACGAATCAACACATTTGATGAAATCAGCATAATTGCACATCCGAATGCAACAGCTATACCTACGGAATAGGCAACAGCTCCACCACCGGGTGGCTGCGCAGTAGTTCCCTCATAGTCCTGGTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTGTTCGGCTTTCACAAGGGCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTCCGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGTGTATTGATACGATTGCCCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAAGTACTGCAATGCGGCTTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGATAGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCGTGAGGTAATATTCCATAATAG-TTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAA-ATAAATCGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTTGTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACAGCTTTATTGGCTAGTGCGTGCGCGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGATGTAGTCGGCTGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCTGTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGATCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCCAGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGCAAGGTTGGCCACATCGTCTACTAGCTGTGCTCGATTGATTACGGGTAGCTGATCCTCAAACTGTTCACTATTTAGTACCTCAATCAGCGG]
[+] EMBL BX466691 [GCACATGTCTGCCTTGTTNNATATGATTGGCGATGCTGTTACAGAATAGTTTATTTACACGCTGAATAACATTTTTAACGAATCAACACATTTGATGAAATCAGCATAATTGCACATCCGAATGCAACAGCTATACCTACGGAATAGGCAACAGCTCCACCACCGGGTGGCTGCGCAGTAGTTCCCTCATAGTCCTGGTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTGTTCGGCTTTCACAAGGGCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTCCGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGTGTATTGATACGATTGCCCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAAGTACTGTAATGCGGCTTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGATAGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCGTGAGGTAATATTCCATAATAGTTTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTNCAACATAAATCG ]
[+] EMBL CNS08TR5 [ GCTGCGCAGTAGTTCCCTCATAGTCCTGCTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTGTTCGGCTTTCACAAGGGCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTCCGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGCGTATTGATACGATTGCCCAACTCAGTAAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAACTACTGC ]
[-] EMBL BX624190 [ ATCGTGTATTGATACGATTGCCCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAAGTACTGCAATGCGGCCTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGATAGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCGTGAGGTAATATTCCATAATAG TTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAA ATAAATCGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTTGTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACAGCTTTATTGGCTAGTGCGTGCGCGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGATGTAGTCGGCTGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCTGTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGATCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCCAGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGC ]
[-] EMBL BM600964 [ CATAATAG TTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAA ATAAATCGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTTGTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACGGCTTTATTAGCTAGTGCGTGCGCGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGATGTAGTCGGCTGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCTGTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGATCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCCAGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGCAAGGTTGGCCACATCGTCTACTAGCTGTGCTCGATTGATTACGGGTAGCTGATCCTCAAACTGTTCACTATTTAGTACCTCAATCAGCGG]
consensusID : consensus_8403#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 970 fasta sequence
[TGTATACCAGCATTGAAAAGTTCCGTACAGTCGATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAACACTCACTGTATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCCAAAACATGTTGTTTTATATTCCCGTGAACTACGGCTCCAATGTACCCACGTCGACCGACTTTGAAGATACAACGCCTACATTCTGGGTGACACCACAGGATCCTACGGCAACCGTTTTCCTTGAGGCGGGAGTCGAATGGGTCGTAGTCAACAAACAGCAGACGGGGTACTATCGTGTGAACTACGACGATGAAAGCTGGCATAATTTTTTTGAGGTACTAAATAGTGATCAGTTTGAGGATCAGCTGCCCGTAATCAATCGAGCACAGCTAGTAGATGATGTGGCCAACCTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATCTGGAGCGTGAAACGGAATACATCCCATGGGCCACGGCGTACAATGCGTTGCAACATCTAGATCGAATGTTCTCTAGCCACAAAGAATACAATCGATTCGAGAACTATGTAGGAATGTTAGCCTCGCATGTGTTTAACGAAATGAATCTATTTGATACTGAAAGCCATCTGAATCGTTTACATCGTGACAAGTCCGTTTACTTGGCGTGTTATTTCGGTGTTGAGGCGTGCTTGGATGCTGCAACTAAAATAATAGAAGAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACGCCGTCTTTTGTGCATTGCACAAATATGATCTGCTCGTTGAAGGAGACTATGGCTTGGAGATTTTCCAAAAATACTGGCTAGCGACAGATCAATACCAGCCGTTGATGGATAAGTTTATTAATGCGTTGGGATCCAG]
[-] EMBL CNS08TOC [TGTATACCAGCATTGAAAAGTTCCGTACAGTCGATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAACACTCACTGTATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCCAAAACATGTTGTTTTATATTCCCGTGAACTACGGCTCCAATGTACCCACGTCGACCGACTTTGAAGATACAACGCCTACATTCTGGGTGACACCACAGGATCCTACGGCAACCGTTTTCCTTGAGGCGGGAGTCGAATGGGTCGTAGTCAACAAACAGCAGACGGGGTACTATCGTGTGAACTACGACGATGAAAGCTGGCATAATTTTTTTGAGGTACTAAATAGTGATCAGTTTGAGGATCAGCTGCCCGTAATCAATCGAGCACAGCTAGTAGATGATGTGGCCAACCTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATCTGGAGCGTGAAACGGAATACATCCCATGGGCCACGGCGTACAATGCGTTGCAACATCTAGATCGAATGTTCTCTAGCCACAAAGAATACAATCGATTCGAGAACTATGTAGGAATGTTAGCCTCGCATGTGTTTAACGAAATGAATCTATTTGATACTGAAAGCCATCTGAATCGTTTACATCGTGACAAGTCCGTTTACTTGGCGTGTTATTTCGGTGTTGAGGCGTGCTTGGATGCTGCAACTAAAATAATAGAAGAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACGCCGTCTTTTGTGCATTGCACAAATATGATCTGCTCGTTGAAGGAGACTATGGCTTGGAGATTTTCCAAAAATACTGGCTAGCGACAGATCAATACCAGCCGTTGATGGATAAGTTTATTAATGCGTTGGGATCCAG]
consensusID : consensus_8403#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 955 fasta sequence
[CAGATACCGCGTTTATCAGTTTGAGGATCAGCTGCCCGTATTAATCGATAACAGTAGTAGATAGATGTGGCCAACGTATGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATACTAGGAGCGTGAAACGGAATACATACCATGGGCCACGGGCGTACAATAGCGTATGCAACATACTAGATCGAATGTTCTCTAGCCACAAAGAATACAATACGATTCGAGAACTATGTAGGAATGTTAGCCTACGCATGTGTTTAACGAAATGCACTCTATTCTGNCTACTGAAAGCCATCTGAATCGTATCTACATCGTGACNAAGTCCGTNTTACTTGGCAGTAGTAAATAACAGGTGTATGAGGCGTGCTTTGGCATTGCTTGCAACTAACACATAATAGAAGAAGACACCTTGCCGCAGGCAAACGTTAAACATTCCCANAAGGAATTGCAACAACGCCGNCTTATTATGGTGCACTTGCACAAACACTACTGATCCTGCCTCGCTCTGCAGGAGACCTATNGGCCTNTGGCAGAATANATCCCCACACAACTACCTTGGCTAAANCGACCAAGATTCCAACTAACCACAGCCCCGCNGCCTGGGACTAACGNACAATNTAACTGCCGTTATGAGGANTGAACCCCGCCAACATCCTGGGCCANGACAACCGGAACTTTATCTTAAANACTTAACCAACACCTTGCTATGAAACAATNACACCTAAAAAAACCCGCANGCCATTACCCCNAACTACACCAGCTGTAACCNCCTTNANCCCACACTTCANCCATCTTCCCNTACACCCAACACTTGCATTTACAACCAGAAAGGNTACCGCGCACCAACCACACAGCAAACTTNTCANCAACNCTNCCANCCNNCTCTCATCACTNCTCCCACCCNCCGCCCACNCCCCTCCCNCCACANACGCNCCCACCNT]
[+] EMBL AL694953 [CAGATACCGCGTTTATCAGTTTGAGGATCAGCTGCCCGTATTAATCGATAACAGTAGTAGATAGATGTGGCCAACGTATGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATACTAGGAGCGTGAAACGGAATACATACCATGGGCCACGGGCGTACAATAGCGTATGCAACATACTAGATCGAATGTTCTCTAGCCACAAAGAATACAATACGATTCGAGAACTATGTAGGAATGTTAGCCTACGCATGTGTTTAACGAAATGCACTCTATTCTGNCTACTGAAAGCCATCTGAATCGTATCTACATCGTGACNAAGTCCGTNTTACTTGGCAGTAGTAAATAACAGGTGTATGAGGCGTGCTTTGGCATTGCTTGCAACTAACACATAATAGAAGAAGACACCTTGCCGCAGGCAAACGTTAAACATTCCCANAAGGAATTGCAACAACGCCGNCTTATTATGGTGCACTTGCACAAACACTACTGATCCTGCCTCGCTCTGCAGGAGACCTATNGGCCTNTGGCAGAATANATCCCCACACAACTACCTTGGCTAAANCGACCAAGATTCCAACTAACCACAGCCCCGCNGCCTGGGACTAACGNACAATNTAACTGCCGTTATGAGGANTGAACCCCGCCAACATCCTGGGCCANGACAACCGGAACTTTATCTTAAANACTTAACCAACACCTTGCTATGAAACAATNACACCTAAAAAAACCCGCANGCCATTACCCCNAACTACACCAGCTGTAACCNCCTTNANCCCACACTTCANCCATCTTCCCNTACACCCAACACTTGCATTTACAACCAGAAAGGNTACCGCGCACCAACCACACAGCAAACTTNTCANCAACNCTNCCANCCNNCTCTCATCACTNCTCCCACCCNCCGCCCACNCCCCTCCCNCCACANACGCNCCCACCNT]
consensusID : consensus_8403#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence
[CCGGATTTAGAGTGTTTGCTGCAGAAAGCAAGGTAGCTCACACTGGGTATGCGTTGGAGTTTCTTGGCAATTCGTTACGTACACTCGAAAACTTTTTTGGACGCCAGTATCAGCTGCCGAAAGTAGATCTCATCGCTATTCCCGATTTTGCGATGGGCGCCATGGAGAACTGGGGCCTGATAACGTTTCGGGAGCAGTACTTAATCTATGAGGAAGGTGTAACGACAGCCCGTACGAAGCAAAACATTGCTGATCTCATTACGCACGAGCTAACGCACATGTGGTTCGGTAACGAGGTTACTCCCGAGTGGTGGACGTACTTATGGTTGAGCGAAGGCTTTGCTAGATACTTTGAATACTACATAACATCACAGCTCGAGCCTACCTGGAACCTCTGGCAGCAGTTCATCGTGAACAATGTCCACTCGGCGCTGTCACAAGACTGTAACAGCAACAATCGAATGATGAGTTACTATGCAACGGATCCGGCGGTACTAAATGACCTGTTTGATTACGTCGTGTACGCAAAGAGTGCTTCCGTTATACGGATGATACAGAACGTGATTGGGTTTGATACCTTCAGGCAGTCTCTTAACGATTACTTACGATCACGAAGTTATCTCACAACGAGGCCGCAGTATCTGTATACCAGCATTGAAAAGTTCCGCACAGT]
[+] EMBL BM625546 [CCGGATTTAGAGTGTTTGCTGCAGAAAGCAAGGTAGCTCACACTGGGTATGCGTTGGAGTTTCTTGGCAATTCGTTACGTACACTCGAAAACTTTTTTGGACGCCAGTATCAGCTGCCGAAAGTAGATCTCATCGCTATTCCCGATTTTGCGATGGGCGCCATGGAGAACTGGGGCCTGATAACGTTTCGGGAGCAGTACTTAATCTATGAGGAAGGTGTAACGACAGCCCGTACGAAGCAAAACATTGCTGATCTCATTACGCACGAGCTAACGCACATGTGGTTCGGTAACGAGGTTACTCCCGAGTGGTGGACGTACTTATGGTTGAGCGAAGGCTTTGCTAGATACTTTGAATACTACATAACATCACAGCTCGAGCCTACCTGGAACCTCTGGCAGCAGTTCATCGTGAACAATGTCCACTCGGCGCTGTCACAAGACTGTAACAGCAACAATCGAATGATGAGTTACTATGCAACGGATCCGGCGGTACTAAATGACCTGTTTGATTACGTCGTGTACGCAAAGAGTGCTTCCGTTATACGGATGATACAGAACGTGATTGGGTTTGATACCTTCAGGCAGTCTCTTAACGATTACTTACGATCACGAAGTTATCTCACAACGAGGCCGCAGTATCTGTATACCAGCATTGAAAAGTTCCGCACAGT]
consensusID : consensus_8403#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence
[AGTAATCTGGTAATATCCCACGATTGGAAAAAAGGTTCCCGGTACAGTCGAATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAAAACAACATTCCAAACTGGNATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCAAAACATGTTGTTTATATTCCCGTGAACTACGGGTCCAATGTACCCACGTCGACCGATTTGAAATACAACGCCTACATTCTGGGCTGAACCGGAGGATCCTACGGAACGTGACCCTNGAGGCGGG]
[+] EMBL AL932298 [AGTAATCTGGTAATATCCCACGATTGGAAAAAAGGTTCCCGGTACAGTCGAATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAAAACAACATTCCAAACTGGNATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCAAAACATGTTGTTTATATTCCCGTGAACTACGGGTCCAATGTACCCACGTCGACCGATTTGAAATACAACGCCTACATTCTGGGCTGAACCGGAGGATCCTACGGAACGTGACCCTNGAGGCGGG]
consensusID : consensus_8403#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 221 fasta sequence
[CACGAATTCGGCACGAGGTGTAGCCGTTAATCAATCGAGCACAGCTAGTAGACGATGTGGGCAACTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGGTATCTTGGAGGCCGTGACAACGGAATACATCCCATGGGACACGGGCGTACAAATGCGTTGCAACATCTAGATCCGGAATGTTCTCTAGCGCNAGCAAAGAATACA]
[+] EMBL BX469666 [CACGAATTCGGCACGAGGTGTAGCCGTTAATCAATCGAGCACAGCTAGTAGACGATGTGGGCAACTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGGTATCTTGGAGGCCGTGACAACGGAATACATCCCATGGGACACGGGCGTACAAATGCGTTGCAACATCTAGATCCGGAATGTTCTCTAGCGCNAGCAAAGAATACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8403#2 ------------------------------------------------------------
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ------------------------------------------------------------
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 TGCAGCAGATAGCCCAGGCTTATTGAGATGCTGCAACTAAAANAATAGAATAAGCACTTG 60
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 ------------------------------------------------------------
consensus_8403#2 ------------------------------------------------------------
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ------------------------------------------------------------
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACTGCCGTCTTTATGTAGCATATG 120
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 ------------------------------------------------------------
consensus_8403#2 ------------------------------------------------------------
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ------------------------------------------------------------
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CACAAATATAGATCTTGCTCGTTGCAAGTGAGACTATGGCTATGGAGATATTCCAAAAAT 180
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 ---------------------------------------------GCACATGTCTGCCTT 15
consensus_8403#2 ------------------------------------------------------------
consensus_8403#5 -----------------------------------------------------AGTAATC 7
consensus_8403#3 ---------------------------------------------------------CAG 3
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 ACTNAGGCTTAGCTGACATGATCANATNACCCAGCCCGTTGCATAGTGATAACNGGTCTT 240
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 GTTNNATATGATTGGCGATGCTGTTACAGAATAGTTTATTTACACGCTGAATAACATTTT 75
consensus_8403#2 ----TGTATACCAGCATTGAAAA----GTTCC--GTA-CAG--TCGA--TCTTCCGGCCA 45
consensus_8403#5 TGGTAATATCCCACGATTGGAAAAAAGGTTCCCGGTA-CAG--TCGAA-TCTTCCGGCCA 63
consensus_8403#3 ATACCGCGTTTATCAGTTTGAGGATCAGCTGCCCGTATTAA--TCGATAACAG-TAGTAG 60
consensus_8403#6 ----CACGAAT-TCGGCACGAGGTGTAGCCGTT--AATCAA--TCGAGCACAGCTAGTAG 51
consensus_8403#0 ATATCAACTTGGCGTACTGGGNGATTAGTNCCCCGNA-AAT--CCTTCCCCATTGNAACN 297
consensus_8403#4 ----------CCGGATTTAGAGTGTTTGCTGCAGAAAGCAAGGTAGCTCACACTGGGTAT 50
consensus_8403#1 TAACGAATCAACACATTTGATGAAATCAGCATAATTG-CACATCCGAATGCAACAGCTAT 134
* *
consensus_8403#2 GT-GTTGAGGTCATCTT---CGAAAGCTG-GGCCAATACGCCAGGCTATCCCGTTGTAAC 100
consensus_8403#5 GT-GTTGAGGTCATCTT---CGAAAGCTG-GGCCAATACGCCAGGCTATCCCGTTGTAAC 118
consensus_8403#3 ATAGATGTGGCCAACGTATGCTCGGGCAG-GTGAAGTGGGATACGATGTAGCACTGTCCC 119
consensus_8403#6 AC-GATGTGGGCAACTT--GCTCGGGCAG-GTGAAGTGGGATACGATGTAGCACTGTCCC 107
consensus_8403#0 GNAGNTNTACTCAATACCTAACCACAAAG-TTGGAATNT-ACACCCTGTGGCATGGTCCC 355
consensus_8403#4 GC-GTTGGAGTTTCTTGGCAATTCGTTAC-GTACACTCGAAAACTTTTT----TGGACGC 104
consensus_8403#1 ACCTACGGAATAGGCAACAGCTCCACCACCGGGTGGCTGCGCAGTAGTTCCCTCATAGTC 194
* * *
consensus_8403#2 -GGTGTCCATCGATCGTACCACACGAA----------CACTC---ACTG-TATCTCAGAA 145
consensus_8403#5 -GGTGTCCATCGATCGTACCACACGAAAACAA-----CATTCCAAACTGGNATCTCAGAA 172
consensus_8403#3 TGATGCAG-TATACTAGGAGC-GTGA-AACGG-----AATACATACCATGGGCCACGGGC 171
consensus_8403#6 TGATGCAGGTATCTTGGAGGCCGTGACAACGG-----AATACATCCCATGGGACACGGGC 162
consensus_8403#0 CTG-GCAACCCACGGGCACGCCTNGACCACGGCCAGGGGTATCCCCCGGGNAGTAACGTG 414
consensus_8403#4 CAGTATCAGCTGCCGAAAGTAGATCTCATCGCTATTCCCGATTTTGCGATGGGCGCCATG 164
consensus_8403#1 CTGGTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTG 254
*
consensus_8403#2 GCGCTTTTGGATGCCG-AACGAGATCGATACGCCACCCCAA-AACATGTTGTTTTATATT 203
consensus_8403#5 GCGCTTTTGGATGCCG-AACGAGATCGATACGCCACCC-AA-AACATGTTGTTT-ATATT 228
consensus_8403#3 GTACAATAGCGTATGC-AACATACTAGATC--GAATGTTCT-CTAGCC---ACAAAGAAT 224
consensus_8403#6 GTACAAATGCGT-TGC-AACAT-CTAGATCCGGAATGTTCT-CTAGCGCNAGCAAAGAAT 218
consensus_8403#0 GGANTAAAAGGNCTTG-GCCACANCAGCGAANCAATCCCCG-ACTAACCACGGGGGCGNC 472
consensus_8403#4 GAGAACTGGGGCCTGATAACGTTTCGGGAGCAGTACTTAAT-CTATGAGGAAGGTGTAAC 223
consensus_8403#1 TTCGGCTTTCACAAGG-GCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTC 313
*
consensus_8403#2 CCCGTGAA-CTACGGCTCCAATGTACCCACGTCGACCGACTTTGAAGATACAACGCCTAC 262
consensus_8403#5 CCCGTGAA-CTACGGGTCCAATGTACCCACGTCGACCGATTT--GAAATACAACGCCTAC 285
consensus_8403#3 ACAATACG-ATTCGAGAACTATGTAGGAATGTTAGCCTACGCATGTGTTTAACGAAATGC 283
consensus_8403#6 ACA--------------------------------------------------------- 221
consensus_8403#0 CGTAACCA-NAACAACGACCAACTTGGCNCCTCCANAAACGTCCGACATTGGNAAGNACC 531
consensus_8403#4 GACAGCCC-GTACGAAGCAAAACATTGCTGATCTCATTACGCACGAGCTAACGCACATGT 282
consensus_8403#1 CGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGTGTATTGATACGATTGC 373
consensus_8403#2 ATTCTGGGTGACAC-CACAGGATCCTACGGCAACCGTTTTCCTTGAGGCGGGAGTCGAAT 321
consensus_8403#5 ATTCTGGGCTGAAC-CGGAGGATCCTACGG--AACGTGACCCTNGAGGCGGG-------- 334
consensus_8403#3 ACTCTATTCTGNCTACTGAAAGCCATCTGAATCGTATCTACATCGTGACNAAGTCCGTNT 343
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CAACACAACCNGACGNCCCGCACGCATGGCCTAGCGCAACAACGCCGGGACCAACCATAN 591
consensus_8403#4 GGT-TCGGTAACGAGGTTACTCCCGAGTGGTGGACGTACTTATGGTTGAGCGAAGGCTTT 341
consensus_8403#1 CCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCT 433
consensus_8403#2 GGGTCGTAGTCAACAAACAGCAGACGGGGTACTATCGTGTGAACTACGACGATGAAAGCT 381
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 TACTTGGCAGTAGTAAATAACAGGTGTATGAGGCGTGCTTTGGCATTGCTTGCAACTAAC 403
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 GGNAGANCAACGAGAAACC-CANGGCCNTGACTACACAACCACCCTTCCCGTTACCCCCC 650
consensus_8403#4 GCTAGATACTTTGAATACTACA----TAACATCACAGCTCGAGCCTACCTGGAACCTCTG 397
consensus_8403#1 CGTACAAGTACTGCAATGCGGCTTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGAT 493
consensus_8403#2 GGCATAATTTTTTTGAGGTACTAAATAGTGATCAGTTTGAGGATCAGCTGCCCGTAATCA 441
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ACATAATAGAAGAAGACACCTTGCCGCAGGCAAACGTTAAACATTCCCANAAGGAATTGC 463
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CACAACGCGCACACNAAAGACTAACCACGAACAGCACACTGGGCCNTCCTGGCACCNACG 710
consensus_8403#4 GCAGCAGTTCATCGTGAACAATGTC---------CACTCGGCGCTGTCACAAGACTGT-- 446
consensus_8403#1 AGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCG 553
consensus_8403#2 ATCGAGCACAGCTAGTAGATGATGTGGCCAACCTTGCTCGGGCAGGTGAAGTGGGATACG 501
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 AACAACGCCGNCTTATTATGGTGCACTTGCACAAACACTACTGATCCTGCCTCGCTCTGC 523
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 AAAGCACAGGNCTGACCAATGTACACCTCCCATNNAAACCTCAACCCAANCACAAAAANC 770
consensus_8403#4 AACAGCAACAATCGAATGATGAGTTACTATGCAACGGAT-CCGGCGGTACTAAATGACCT 505
consensus_8403#1 TGAGGTAATATTCCATAATAGTTTCGTTACGAGCGCATC--CCACGCTAGC-CAGGAACC 610
consensus_8403#2 ATGTAGCACTGTCCCTGATGCAGTATCTGGAGCGTGAAACGGAATACATCCCATGGGCCA 561
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 AGGAGACCTATNGGCCTNTGGCAGAATANATCCCCACACAACTACCTTGGCTAAANCGAC 583
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 ANCCGATTACCCCCTCAATATAGCGACAAAACNGCACGCCNAATCAACAANTAACCCGAN 830
consensus_8403#4 GTTTGATTACGTCGTGTACGCAAAGAGTGCTTCCGTTATACGGATGATACAGAACGTGAT 565
consensus_8403#1 GGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAAATAAAT 670
consensus_8403#2 CGGCGTACAATGCGTTGCAACATCTAGATCGAATGTTCTCTAGCCACAAAGAATACAATC 621
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 CAAGATTCCAACTAACCACAGCCCCGCNGCCTGGGACTAACGNACAATNTAACTGCCGTT 643
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CAACCAAAGACCCACCCAGNGAGCCCCACAGCGCCAAAANTAAACNANNAAGGACTACCC 890
consensus_8403#4 TGGGTTTGATACCTTCAGGCAGTCTCTTAACGATTACTTACGATCACGAAGTTATCTCAC 625
consensus_8403#1 CGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTT 730
consensus_8403#2 GATTCGAGAACTATGTA-GGAATGTTAGCCTCGCATGTGTTTAACGAAATGAATCTATTT 680
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ATGAGGANTGAACCCCG-CCAACATCCTGGGCCANGACAACCGGAACTTTATCTTAAANA 702
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CAATGGGGCACAACCAC-AGAGGCACCACNGCCAAANCGGACAACACATGATGCCCTNAG 949
consensus_8403#4 AACGAGGCCGCAGTATC-TGTATACCAGCATTGAAAA-GTTCCGCACAGT---------- 673
consensus_8403#1 GTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACAGCTTTATTGGCTAGTGCGTGCG 790
consensus_8403#2 GATACTGAAAGCCA-----TCTGAATCGTTTACATCGTGACAAGTCCGTTTACTTGGCGT 735
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 CTTAACCAACACCT-----TGCTATGAAACAATNACACCTAAAAAAACCCGCANGCCATT 757
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 GGGAGCAGACCTCNGGGGCNACTAGGGNACNGGAGCCACCCCGAACACCCCCAGGGAGGC 1009
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 CGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGAT 850
consensus_8403#2 GTTATTTCGGTGTTGAGGCGTGCTTGGATGCTGCAACTAAAATAATAGAAGAAGCACTTG 795
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ACCCCNAACTACACCAGCTGTAACCNCCTTNANCCCACACTTCANCCATCTTCCCNTACA 817
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CNANCGANCGACACACAANG-GGCCGGCAAAACACAAAACCNGGAGNGCACAACCACAGC 1068
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 GTAGTCGGC-TGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCT 909
consensus_8403#2 CCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACGCCGTCTTTTGTGCATTGCACA 855
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 CCCAACACTTGCATTTACAACCAGAAAGGNTACCGCGCACCAACCACACAGCAAACTTNT 877
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CATAAGGGCCCAGGACCCAACCAACAACGGAACANAACCCGGAANAAAANNGGCATNGAA 1128
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 GTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGA 969
consensus_8403#2 AATATGATCTGCTCGTTGAAGGAGACTATGGCTTGGAGATTTTCCAAAAATACTGGCTAG 915
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 CANCAACNCTNCCANCCNNCTCTCATCACTNCTCCCACCCNCCGCCCACNCCCCTCCCNC 937
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 AAACAACAACACCCCACAACCANAGCCCAGCACCGCACACGGCCAGAGGGCACGGCCGAA 1188
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 TCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCC 1029
consensus_8403#2 CGACAGATCAATACCAGCCGTTGATGGATAAGTTTATTAATGCGTTGGGATCCAG----- 970
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 CACANACGCNCCCACCNT------------------------------------------ 955
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CGNANCGCCGGCCACACNCANAACNACACCNAACAANCANGGCAAANCACGCACAGGGAG 1248
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 AGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGCAAGGTTG 1089
consensus_8403#2 ------------------------------------------------------------
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ------------------------------------------------------------
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 CAGAACNGAGCCGCAGGCCACCTAACACNGACNAACCAAAGCGGGGAACACTATAAANCN 1308
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 GCCACATCGTCTACTAGCTGTGCTCGATTGATTACGGGTAGCTGATCCTCAAACTGTTCA 1149
consensus_8403#2 ------------------------------------------------------------
consensus_8403#5 ------------------------------------------------------------
consensus_8403#3 ------------------------------------------------------------
consensus_8403#6 ------------------------------------------------------------
consensus_8403#0 AAACCCCNACCCCGANCCAACCAGAAAGGGAAGACGAAAAAAAGAAAGCAGAACGAANGA 1368
consensus_8403#4 ------------------------------------------------------------
consensus_8403#1 CTATTTAGTACCTCAATCAGCGG------------------------------------- 1172
consensus_8403#2 -----------------
consensus_8403#5 -----------------
consensus_8403#3 -----------------
consensus_8403#6 -----------------
consensus_8403#0 NACTAAAAACGCAAAAC 1385
consensus_8403#4 -----------------
consensus_8403#1 -----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||