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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8469#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 740 fasta sequence
[CGCGGTCCGAAGAAACATTTGAAGCGTTTAAATGCTCCACGAGGATGGATGTTGGACAAGACCGGCGGTACCTTCGCGCCACGTCCGTCCACCGGCCCACACAAGCTGCGCGAATCGCTGCCGCTGGTGATCTTCCTGCGTAACCGCCTGAAGTACGCACTGACCAACAGCGAGGTGACGAAGATTGTGATGCAGCGTCACGTCAAGATCGACGGCAAGGTTCGCACCGATCCGAACTACCCGGCCGGATTCATGGGTACGTATTCCAGTTTTAGCAGAAGAATGTTAGCTTAGCAACTGGAGAGGAAGAAACAGTGGGGTGTGGTGGTAATGGCGCTATCGAAGCGGGCTAGCGAATGAAACAAGCGACGTCTGTCAAATTAAAGTTGCCAAGAGGAACATTTCTCCATCGACGGTCGCTGAAGGCATTGCTAGTGAATACTAGATGGCCTCATCAGTAACATAACTGACGGAGAGACAGTACGAATTGTGTGAATCAAGCAAATGTGTAGTTCCTAACGGGTTTGTTGAGACAATGTTTAAGTGTATTAATGTTTGGAAACTGATTCCTAATGGAGAAAATTGAGGGAAAATCGGTCCTGTCAAAACACGGTAAACACACTGGGGTTTAGCTCAGTATGGGCAAAAGGAAGCATTTCATATTACGCCCAATCGAAGCGGGTTTAGCGAAATAATAAGCATCGCCCGTCAAAAATGTGGCCAGAGTAAAGTTACTCCAT]
[+] EMBL BX605923 [CGCGGTCCGAAGAAACATTTGAAGCGTTTAAATGCTCCACGAGGATGGATGTTGGACAAGACCGGCGGTACCTTCGCGCCACGTCCGTCCACCGGCCCACACAAGCTGCGCGAATCGCTGCCGCTGGTGATCTTCCTGCGTAACCGCCTGAAGTACGCACTGACCAACAGCGAGGTGACGAAGATTGTGATGCAGCGTCACGTCAAGATCGACGGCAAGGTTCGCACCGATCCGAACTACCCGGCCGGATTCATGGGTACGTATTCCAGTTTTAGCAGAAGAATGTTAGCTTAGCAACTGGAGAGGAAGAAACAGTGGGGTGTGGTGGTAATGGCGCTATCGAAGCGGGCTAGCGAATGAAACAAGCGACGTCTGTCAAATTAAAGTTGCCAAGAGGAACATTTCTCCATCGACGGTCGCTGAAGGCATTGCTAGTGAATACTAGATGGCCTCATCAGTAACATAACTGACGGAGAGACAGTACGAATTGTGTGAATCAAGCAAATGTGTAGTTCCTAACGGGTTTGTTG ]
[+] EMBL BX607397 [ TGAAGCGTTTAAATGCTCCACGAGGATGGATGTTGGACAAGACCGGCGGTACCTTCGCGCCGCGTCCGTCCACCGGCCCACACAAGCTGCGCGAATCGCTGCCGCTGGTGATCTTCCTGCGTAACCGCCTGAAGTACGCACTGACCAACAGCGAGGTGACGAAGATTGTGATGCAGCGTCACGTCAAGATCGACGGCAAGGTCCGCACCGATCCGAACTACCCGGCCGGATTCATGGGTACGTATTCCAGTTTTAGCAGAAGAATGTTAGCTTAGCAACTGGAGAGGAAGAAACAGTGGGGTGTGGTGGTTATGGCGCTATCGAAGCGGGCTAGCGAATGAAACAAGCGACGTCTGTCAAATTAAAGTTGCCAAGAGGAACATTTCTCCATCGACGGTCGCTGAAGGCATTGCTAGTGAATACTAGATGGCCTCATCAGTAACATAACTGACGGAGAGACAGTACGAATTGAGTGAATCAAGCAAATGTGAAGTTCCTAACGGGTTTGCTGAGACAATGTTTAAGTGTATTAATGTTTGGAAACTGATTCCTAATGGAGAAAATTGAGGGAAAATCGGTCCTGTCAAAACACGGTAAACACACTGGGGTTTAGCTCAGTATGGGCAAAAGGAAGCATTTCATATTACGCCCAATCGAAGCGGGTTTAGCGAAATAATAAGCATCGCCCGTCAAAAATGTGGCCAGAGTAAAGTTACTCCAT]
consensusID : consensus_8469#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 694 fasta sequence
[CCGGTGCGAACGAACTGTCTTCCCTGCATCGGTGCTCTACGACATACCTCCCCTGAGTGCTCATATCCCCCCTCCCACTCGTACGGTGTTATTGATTGTTTTAAAAGAAATCTCTGTTTTTCTCCTCCACCCCTATCCTTTTTGCTCCCCGCCATCTTTTAGCTCGACCGGAAAAGCAAAGAGAGCAACACCCCACCACCACCAGGGCCATAAGGGGGCAGGATGGCATTCAGCGTGCTGAACACGGTGGCGAAGCGCACCGCCGCGAACGTTTATGTAACCGGCGGCGGGCTGCTGAAAAATGTCGCCGCTTTATGTAACGGGCAGCAGCCGGCCCGGTCCGCCGGCAAGTGGTTCCCGGACGAGCAGTTCATCGACCAGTTCAAGGGGCCGGTCATGTACCCGGACGAGGTGACGTCCCGCTGGAAGCTGCCGCCGTGGAACAGCAAGATTGCGCCGGTTGAGAAGACGGTGCGCAACCTGAGCCTCAACTTTGGACCGCAGCACCCAGCCGCCCACGGCGTACTGCGGCCGGTGCTCGAGCTGGACGGCGAGACGGTGATGCGGGCGGATCCGCACATCGGGCTGCTGCACCGCGGCACCGAGAAGCTGATCGAGTACAAGACGTACACGCAGGCGCTGCCGTACTTCGACCGGCTCGACTACGTGTCGATGATGTGCAACGAGCAGTGCT]
[+] EMBL BM645297 [CCGGTGCGAACGAACTGTCTTCCCTGCATCGGTGCTCTACGACATACCTCCCCTGAGTGCTCATATCCCCCCTCCCACTCGTACGGTGTTATTGATTGTTTTAAAAGAAATCTCTGTTTTTCTCCTCCACCCCTATCCTTTTTGCTCCCCGCCATCTTTTAGCTCGACCGGAAAAGCAAAGAGAGCAACACCCCACCACCACCAGGGCCATAAGGGGGCAGGATGGCATTCAGCGTGCTGAACACGGTGGCGAAGCGCACCGCCGCGAACGTTTATGTAACCGGCGGTGGGCTGCTGAAAAATGTCGCCGCTTTATGTAACGGGCAGCAGCCGGCCCGGTCCGCCGGCAAGTGGTTTCCGGACGAGCAGTTCATCGACCAGTTCAAGGGGCCGGTCATGTACCCGGACGAGGTGACGTCCCGCTGGAAGCTGCCGCCGTGGAACAGCAAGATTGCGCCGGTTGAGAAGACGGTGCGCAACCTGAGCCTCAACTTTGGACCGCAGCACCCAGCCGCCCACGGCGTACTGCGGCTGGTGCTCGAGCTGGACGGCGAGACGGTGATGCGGGCGGATCCGCACATCGGGCTGCTGCACCGCGGCACCGAGAAGCTGATCGAGTACAAGACGTACACGCAGGCGCTGCCGTACTTCGACCGGCTCGACTACGTGTCGATGATGTGCAACGAGCAGTGCT]
[+] EMBL BM638888 [ ccgCCTGAGTGCTCATATCCCCCCTCCCACTCGTACGGTGTTATTGATTGTTTTAAAAGAAATCTCTGTTTTTCTCCTCCACCCCTATCCTTTTTGCTCCCCGCCATCTTTTAGCTCGACCGGAAAAGCAAAGAGAGCAACACCCCACCACCACCAGGGCCATAAGGGGGCAGGATGGCATTCAGCGTGCTGAACACGGTGGCGAAGCGCACCGCCGCGAACGTTTATGTAACCGGCGGCGGGCTGCTGAAAAATGTCGCCGCTTTATGTAACGGGCAGCAGCCGGCCCGGTCCGCCGGCAAGTGGTTCCCGGACGAGCAGTTCATCGACCAGTTCAAGGGGCCGGTCATGTACCCGGACGAGGTGACGTCCCGCTGGAAGCTGCCGCCGTGGAACAGCAAGATTGCGCCGGTTGAGAAGACGGTGCGCAACCTGAGCCTCAACTTTGGACCGCAGCACCCAGCCGCCCACGGCGTACTGCGGTCGGTGCTCGAGCTGGACGGCGAGACGGTGATGCGGGCGGATCCGCACATCGGGCTGCTGCACCGCGGCACCGAGAAGCTGATCGAGTACAAGACGTACACGCAGGCGCTGCCGTACTTCGACCGGCTCGACT ]
[+] EMBL BM641775 [ ccGCTCATATTCCCCCTCCCACTCGTACGGTGTTATTGATTGTTTTAAAAGAAATCTCTTTTTTTCTCCTCCACCCCTATCCTTTTTGCTCCCCGCCATCTTTTAGCTCGACCGGAAAAGCAAAGAGAGCAACACCCCACCACCACCAGGGCCATAAGGGGGCAGGATGGCATTCAGCGTGCTGAACACGGTGGCGAAGCGCACCGCCGCGAACGTTTATGTAACCGGCGGCGGGCTGCTGAAAAATGTCGCCGCTTTATGTAACGGGCAGCAGCCGGCCCGGTCCGCCGGCAAGTGGTTCCCGGACGAGCAGTTCATCGACCAGTTCAAGGGGCCGGTCATGTACCCGGACGAGGTGACGTCCCGTTGGAAGCTGCCGCCGTGGAACAGCAAGATTGCGCCGGTTGAGAAGACGGTGCGCAACCTGAGCCTCAACTTTGGACCGCAGCACCCAGCCGCCCACGGCGTACTGCGGCCGGTGCTCGAGCTGGACGGCGAGACGGTGATGC ]
consensusID : consensus_8469#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 472 fasta sequence
[CCGCCAAGCGTTCCTGCAGCAAACATCTTATCAACCCAGAGACCAACCA-ACCACCAAACAACCCAACAACAATGAACTTCTCCAAGATCTTCATCTTTGTCGTGCTGGCAGTGCTATTGCTCTGCAGTCAGACGGAAGCGGGACGGCTGAAGAAGCTGGGAAAGAAAATTGAGGGAGCCGGCAAGCGAGTGTTCAAGGCAGCAGAGAAGGCCCTACCGGTGGTGGCAGGCGTTAAGGCGCTCGGTTAGAGCGTCGGCAGGAGGATGGTTCTATTCGTGCTTAAGACGACGGCTCTGCTAACATGATATGGCAAAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGGAGAGAGATGAAACAGCTTTAACAGATCTGTGGGCAGGGAGGGGAAAAGTGATAAAATTATAGCATGTAGTAAACAGATCTTGACTAGTTCGGCAAATAAATTTCACTTCTTATCTAACTGC]
[+] EMBL BM632691 [CCGCAAAGCGTTCCTGCAGCAAACATCTTATCAACCCAGAGACCAACCACACCACCAAACAACCCAACAACAATGAACTTCTCCAAGATCTTCATCTTTGTCGTGCTGGCATTGCTATTGCTCTGCAGTCAGACGGAAGCGGGACGGCTGAAGAAGCTGGGAAAGAAAATTGAGGGAGCCGGCAAGCGAGTGTTCAAGGCAGCAGAGAAGGCCCTACCGGTGGTGGCAGGCGTTAAGGCGCTCGGTTAGAGCGTCGGCAGGAGGATGGTTCTATTCGTGCTTAAGACGACGGCTCTGCTAACATGATATGGCAAAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGGAGAGAGATGAAACAGCTTTAACAGATCTGTGGGCAGGGAGGGGAAAAGTGATAAAATTATAGCATGTAGTATACAGATCTTGACTAGTTCGGCAAATAAAT ]
[+] EMBL BM622152 [ CCGAGCGTTCCTGCAGCAAACATCTTATCAACCCAGAGACCAACCA ACCACCAAACAACCCAACAACAATGAACTTCTCCAAGATCTTCATCTTTGTCGTGCTGGCAGTGCTATTGCTCTGCAGTCAGACGGAAGCGGGACGGCTGAAGAAGCTGGGAAAGAAAATTGAGGGAGCCGGCAAGCGAGTGTTCAAGGCAGCAGAGAAGGCCCTACCGGTGGTGGCAGGCGTTAAGGCGCTCGGTTAGAGCGTCGGCAGGAGGATGGTTCTATTCGTGCTTAAGACGACGGCTCTGCTAACATGATATGGCAAAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGGAGAGAGATGAAACAGCTTTAACAGATCTGTGGGCAGGGAGGGGAAAAGTGATAAAATTATAGCATGTAGTAAACAGATCTTGACT ]
[+] EMBL BM583589 [ ccgGCGTTCCTGCAGCAAACATCTTATCAACCCAGAGACCAACCA ACCACCAAACAACCCAACAACAATGAACTTCTCCAAGATCTTCATCTTTGTCGTGCTGGCAGTGCTATTGCTCTGCAGTCAGACGGAAGCGGGACGGCTGAAGAAGCTGGGAAAGAAAATTGAGGGAGCCGGCAAGCGAGTGTTCAAGGCAGCAGAGAAGGCCCTACCGGTGGTGGCAGGCGTTAAGGCGCTCGGTTAGAGCGTCGGCAGGAGGATGGTTCTATTCGTGCTTAAGACGACGGCTCTGCTAACATGATATGGCAAAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGGAGAGAGATGAAACAGCTTTAACAGATCTGTGGGCAGGGAGGGGAAAAGTGATAAAATTATAGCATGTAGTAAACAGATCTTGACTAGTTCGGCAAATAAATTTCACTTCTTATCTAACTGC]
consensusID : consensus_8469#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 176 fasta sequence
[TGATTAGATTANACAACACATACCTCATCCATTTCTCTATTGGCATGATATNCCCACGCGAAGGTGGCGAAGCAAGCGTTCATCTCCACCGTCAGCANGATGGGCAAGCAGGCAACTGTTACTCATGTCNNCCTCGGCGGTGCACGGATTCNGATACCTCNTAGCATGCCTAATCN]
[+] EMBL BX624062 [TGATTAGATTANACAACACATACCTCATCCATTTCTCTATTGGCATGATATNCCCACGCGAAGGTGGCGAAGCAAGCGTTCATCTCCACCGTCAGCANGATGGGCAAGCAGGCAACTGTTACTCATGTCNNCCTCGGCGGTGCACGGATTCNGATACCTCNTAGCATGCCTAATCN]
consensusID : consensus_8469#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 99 fasta sequence
[ATTCAAAGGTCGAACAGACCTAAACTTTAAACTTCTACACCTAAAAATAACTCTTAATCCAACATCCGAGGGTCGGCGATCTTTTTTTATTCGAATATG]
[+] EMBL AGA283090 [ATTCAAAGGTCGAACAGACCTAAACTTTAAACTTCTACACCTAAAAATAACTCTTAATCCAACATCCGAGGGTCGGCGATCTTTTTTTATTCGAATATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8469#2 -----------------------------------------------CCGCCAAGCGTTC 13
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 ----CGCGGTCCGAAGAAACATTTGAAGCGTTTAAATGCTCCACGAGGATGGATGTTGGA 56
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 CCGGTGCGAACGAACTGTCTTCCCTGCATCGGTGCTCTACGACATACCTCCCCTGAGTGC 60
consensus_8469#2 CTGCAGCAAACATCTTATCAACCCAGAGACCAACCAACCACCAAACAACCCAACAACAAT 73
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 CAAGACCGGCGGTACCTTCGCGCCACGTCCGTCCACCGGCCCACACAAGCTGCGCGAATC 116
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 TCATATCCCCCCTCCCACTCGTACGGTGTTATTGATTGTTTTAAAAGAAATCTCTGTTTT 120
consensus_8469#2 GAACTTCTCCAAGATCTTCATCTTTGTCGTGCTGGCAGTGCTATTGCTCTGCAGTCAGAC 133
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 GCTGCCGCTGGTGATCTTCCTGCGTAACCGCCTGAAGTACGCACTGACCAACAGCGAGGT 176
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 TCTCCTCCACCCCTATCCTTTTTGCTCCCCGCCATCTTTTAGCTCGACCGGAAAAGCAAA 180
consensus_8469#2 GGAAGCGGGACGGCTGAAGAAGCTGGGAAAGAAAAT--TGAGGGAGCCGGCAAGCGAGTG 191
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 GACGAAGATTGTGATGCAGCGTCACGTCAAGATCGA--CGGCAAGGTTCGCACCGATCCG 234
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 GAGAGCAACACCCCACCACCACCAGGGCCATAAGGGGGCAGGATGGCATTCAGCGTGCTG 240
consensus_8469#2 TTCAAGGCAGCAGAGAAGGCCCTACCGGTGGTG---GCAGGCGTTAAGGCGCTCGGTTAG 248
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 AACTACCCGGCCGGATTCATGGGTACGTATTCC---AGTTTTAGCAGAAGAATGTTAGCT 291
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 AACACGGTGGCGAAGCGCACCGCCGCGAACGTTTATGTAACCGGCGGCGGGCTGCTGAAA 300
consensus_8469#2 AGCGTCGGCAGGAGGATGGTTCTATTCGTGCTTAAGACGACGGCTCTGCTAACATGATAT 308
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 TAGCAACTGGAGAGGAAGAAACAGTGGGGTGTGGTGGTAATGGCGCTATCGAAGCGGGCT 351
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 AATGTCGCCGCTTTATGTAACGGGCAGCAGCCGGCCCGGTCCGCCGGCAAGTGGTTCCCG 360
consensus_8469#2 GGCAAAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGGGAGAGAGATGAAACAGCT 368
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 AGCGAATGAAACAAGCGACGTCTGTCAAATTAAAGTTGCCAAGAGGAACATTTCTCCAT- 410
consensus_8469#3 --TGATTAGATTANACAACACATACCTCATCCATTTCTCTATTGGCATGATATNCCCACG 58
consensus_8469#1 GACGAGCAGTTCATCGACCAGTTCAAGGGGCCGGTCATGTACCCGGACGAGGTGACGTCC 420
consensus_8469#2 TTAACAGATCTGTGGGCAGGGAGGGGAAAAGTG--ATAAAATTATAG--CATGTAGTAAA 424
consensus_8469#4 -------ATTCAAAGGTCGAACAGACCTAAACT--TTAAACTTCTA---CACCTAA-AAA 47
consensus_8469#0 CGACGGTCGCTGAAGGCATTGCTAGTGAATACTAGATGGCCTCATCAGTAACATAACTGA 470
consensus_8469#3 CGAAGGTGGC-GAAGCAAGCGTTCATCTCCACC-GTCAGCANGATGGGCAA-GCAGGCAA 115
consensus_8469#1 CGCTGGAAGCTGCCGCCGTGGAACAGCAAGATTGCGCCGGTTGAGAAGACGGTGCGCAAC 480
*
consensus_8469#2 CAGAT-CTTGACTAG---TTCGGCAAATAAATTTCACTTCTTATCTAACTGC-------- 472
consensus_8469#4 TAACT-CTTAATCCAACATCCGAGGGTCGGCGATCTTTTTTTATTCGAATATG------- 99
consensus_8469#0 CGGAGAGACAGTACGAATTGTGTGAATCAAGCAAATGTGTAGTTCCTAACGGGTTTGTTG 530
consensus_8469#3 CTGTTACTCATGTCNNCCTCGGCGGTGCACGGATTCNGATACCTCNTAGCATGCCTAATC 175
consensus_8469#1 CTGAGCCTCAACTTTGGACCGCAGCACCCAGCCGCCCACGGCGTACTGCGGCCGGTGCTC 540
*
consensus_8469#2 ------------------------------------------------------------
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 AGACAATGTTTAAGTGTATTAATGTTTGGAAACTGATTCCTAATGGAGAAAATTGAGGGA 590
consensus_8469#3 N----------------------------------------------------------- 176
consensus_8469#1 GAGCTGGACGGCGAGACGGTGATGCGGGCGGATCCGCACATCGGGCTGCTGCACCGCGGC 600
consensus_8469#2 ------------------------------------------------------------
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 AAATCGGTCCTGTCAAAACACGGTAAACACACTGGGGTTTAGCTCAGTATGGGCAAAAGG 650
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 ACCGAGAAGCTGATCGAGTACAAGACGTACACGCAGGCGCTGCCGTACTTCGACCGGCTC 660
consensus_8469#2 ------------------------------------------------------------
consensus_8469#4 ------------------------------------------------------------
consensus_8469#0 AAGCATTTCATATTACGCCCAATCGAAGCGGGTTTAGCGAAATAATAAGCATCGCCCGTC 710
consensus_8469#3 ------------------------------------------------------------
consensus_8469#1 GACTACGTGTCGATGATGTGCAACGAGCAGTGCT-------------------------- 694
consensus_8469#2 ------------------------------
consensus_8469#4 ------------------------------
consensus_8469#0 AAAAATGTGGCCAGAGTAAAGTTACTCCAT 740
consensus_8469#3 ------------------------------
consensus_8469#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||