cluster # 8498

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Anopheles gambiae
cluster # 8498 cluster # 8498 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8498#0 length = 760 sequences # 7

consensus_8498#1 length = 694 sequences # 3

consensusID : consensus_8498#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 760
fasta sequence

                              [CCCACGAGGTATAAAAATCTTTCTCGTGCAGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTA-GTAAATTAGCCTACACTTAAAAAGGGCAAATGATCGTGCGTTAGGTATCCGTAATAGTGTAGTGGAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC-CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCGTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGATGGCGGACACGGAAGTCGCACAAACGATCGATCAGGCGATTGCGGTTCTCAGCGTCGGCGACCCGTCTGCCGATCGGCATCCGGATAAGCGCATGAAGGCAGCATACAAGGCATACGAAGAGGAGGAATTGAAGC]

[+] EMBL AL692418             [CCCACGAGGTATAAAAATCTTTCTCGTGCAGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTAGGTAAATTAGCGTACACTTAAAAAGGGCAAATGATTGTGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGCGCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGTAAGCGGC                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM632748             [      ccgcATAAAAATCTTTCTCGTGCAGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTA ATAAATTAGCCTACACTTAAAAAGGGCAAATGATCGTGCGTTAGGTATCCGTAATAGTGTAGTGGAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTTCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGACGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCGTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGATGGCGGACACG                                                                                                                            ]
[+] EMBL BM590843             [                           ccgGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTA ATAAATTAGCCTACACTTAAAAAGGGCAAATGATCGTGCGTTAGGTATCCGTAATAGTGTAGTGGAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTTCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGACGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCGTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTACCGCTGGAGGAAAATCTG ACCGTGTGATGGCGGA                                                                                                                                ]
[+] EMBL BX607708             [                                                                 TTAAACATAAATATCTA GTAAATTAGCGTACACTTAAAAAGGGCAAATGATTGTGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCGTCCGCGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTACCGCTGGAGGAGAATCTGAACCGTGTGATGGCGGACACGGAAGTCGCACAAACGATCGATCAGGCGATTGCGGTTCTCAGCGTCGGCGACCCGTCTGCCGATCGGCATCCGGATAAGCGCATGAAGGCAGCATACAAGGCATACGAAGAGGAGGAATTGAAGC]
[+] EMBL BX619226             [                                                                                      AATTAGTCTACACNTTAAA  GGCAAATGATCGTGCGTTAGGTATCCGTAATAGTGTAGTGGAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGTAAACCTTTTTCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAGAAGGAGGAAGAAGAACGGCGCAAGGCGGANGCGG                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX606394             [                                                                                                                                                                               TGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCGTCCGCGGCCGTA                                                                                                                                                                                                    ]
[+] EMBL BX618856             [                                                                                                                                                                                                                          GTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGC CAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAGAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAGGTTCCTGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCGTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGCTGGCGGACACGGAAGTCGCACAAACGATCGATCAG                                                                                                    ]




>consensus_8498#0
CCCACGAGGTATAAAAATCTTTCTCGTGCAGTAAAACTGGCGTTGAAATGAATGTTTAAG
GTGATTTAAACATAAATATCTAGTAAATTAGCCTACACTTAAAAAGGGCAAATGATCGTG
CGTTAGGTATCCGTAATAGTGTAGTGGAAGCATTGAAATTGCTAGACTAAAACGTGGTGT
ACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATG
GGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCC
AACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTG
GCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAG
AAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAAAG
GTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGA
GCCATCGAAGCGTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTACCG
CTGGAGGAAAATCTGAACCGTGTGATGGCGGACACGGAAGTCGCACAAACGATCGATCAG
GCGATTGCGGTTCTCAGCGTCGGCGACCCGTCTGCCGATCGGCATCCGGATAAGCGCATG
AAGGCAGCATACAAGGCATACGAAGAGGAGGAATTGAAGC

consensusID : consensus_8498#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 694
fasta sequence

                              [CCGCCGTAATTCATAAAAATCTTTCTCGTGCCGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTAGAAAATTAGCGTACACTTAAAAAGAGCAAATGATTGTGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATAAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCTTCCACGGCCGTACCGTCGAAGCCGAAAGTGGT-GGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGATGGCGGGACACGGAAGTCGCACAAACGATCGATCA-GGCGATTGCGGTTCTCAGCGTCGGCGACCCCG]

[+] EMBL BM607279             [CCGCCGTAATTCATAAAAATCTTTCTCGTGCCGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTAGAAAATTAGCGTACACTTAAAAAGAGCAAATGATTGTGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATAAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCTTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGATGGCGGGACACGGAAGTCGCACAAACGATCGATCAGGGCGATTGCGGTTCTCAGCGTCGGCGACCC  ]
[+] EMBL BM621375             [CCG CGTAATTCATAAAAATCTTTCTCGTGCCGTAAAACTGGCGTTGAAATGAATGTTTAAGGTGATTTAAACATAAATATCTAGAAAATTAGCGTACACTTAAAAAGAGCAAATGATTGTGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGTGTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGATGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCGCCAACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGCTGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCAAGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATAAAGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCTTCCACGGCCGTACCGTCGAAGCCGAAAGTGGT GGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGATGGCGGGACACGGAAGTCGCACAAACGATCGATCA GGCGATTGCGGTTCTCAGCGTCGGCGACCCCG]
[+] EMBL BM592500             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGACGACGGCAAAGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGCGAGCCATCGAAGCTTCCACGGCCGTACCGTCGAAGCCGAAAGTGGT GGAGAAGGAAGTACCGCTGGAGGAAAATCTGAACCGTGTGATGGC GGACACGGAAGTCGCACAAACGATCGATCA GG                              ]




>consensus_8498#1
CCGCCGTAATTCATAAAAATCTTTCTCGTGCCGTAAAACTGGCGTTGAAATGAATGTTTA
AGGTGATTTAAACATAAATATCTAGAAAATTAGCGTACACTTAAAAAGAGCAAATGATTG
TGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGT
GTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGA
TGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCG
CCAACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGC
TGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCA
AGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATAAAGACGACGGCAA
AGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGC
GAGCCATCGAAGCTTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTAC
CGCTGGAGGAAAATCTGAACCGTGTGATGGCGGGACACGGAAGTCGCACAAACGATCGAT
CAGGCGATTGCGGTTCTCAGCGTCGGCGACCCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8498#0      --CCCACGAGGTATAAAAATCTTTCTCGTGCAGTAAAACTGGCGTTGAAATGAATGTTTA 58
consensus_8498#1      CCGCCGTAATTCATAAAAATCTTTCTCGTGCCGTAAAACTGGCGTTGAAATGAATGTTTA 60
                         **   *   ******************* ****************************

consensus_8498#0      AGGTGATTTAAACATAAATATCTAGTAAATTAGCCTACACTTAAAAAGGGCAAATGATCG 118
consensus_8498#1      AGGTGATTTAAACATAAATATCTAGAAAATTAGCGTACACTTAAAAAGAGCAAATGATTG 120
                      ************************* ******** ************* ********* *

consensus_8498#0      TGCGTTAGGTATCCGTAATAGTGTAGTGGAAGCATTGAAATTGCTAGACTAAAACGTGGT 178
consensus_8498#1      TGCGTGAGGTATCTGTAACAGTGTAGTGCAAGCATTGAAATTGCTAGACTAAAACGTGGT 180
                      ***** ******* **** ********* *******************************

consensus_8498#0      GTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGA 238
consensus_8498#1      GTACCAGCAGAGAAGAAAGCAAACCTTTTCCCCAATATTGTGCCACGATGCCGAAAAAGA 240
                      ************************************************************

consensus_8498#0      TGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCG 298
consensus_8498#1      TGGGAATAAACCCGAAGGCCGCCGAGGCCCGAGAACGCAAGGCTGAGGCTAAAAAATCCG 300
                      ************************************************************

consensus_8498#0      CCAACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGC 358
consensus_8498#1      CCAACGAAAAGGCTGCCAAGGCAGCGGAAGATGCTTACTGGGCGGACGACGACAAACAGC 360
                      ************************************************************

consensus_8498#0      TGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCA 418
consensus_8498#1      TGGCGAAGAAAAAGAAGCAAAAGGAGGAAGAAGAACGGCGCAAGGCGGAAGCGGCCCGCA 420
                      ************************************************************

consensus_8498#0      AGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATCAAGACGACGGCAA 478
consensus_8498#1      AGAAGGCAGAAACCAAAGCCCTGCTCGAGCAAGAGATGAACTCGATAAAGACGACGGCAA 480
                      ********************************************** *************

consensus_8498#0      AGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGC 538
consensus_8498#1      AGGTTCCGGCACCGAAGATAACCCGCTCGCAAATCGAGGCCGATCTAGAGAAACGCCAGC 540
                      ************************************************************

consensus_8498#0      GAGCCATCGAAGCGTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTAC 598
consensus_8498#1      GAGCCATCGAAGCTTCCACGGCCGTACCGTCGAAGCCGAAAGTGGTGGAGAAGGAAGTAC 600
                      ************* **********************************************

consensus_8498#0      CGCTGGAGGAAAATCTGAACCGTGTGATGGCGG-ACACGGAAGTCGCACAAACGATCGAT 657
consensus_8498#1      CGCTGGAGGAAAATCTGAACCGTGTGATGGCGGGACACGGAAGTCGCACAAACGATCGAT 660
                      ********************************* **************************

consensus_8498#0      CAGGCGATTGCGGTTCTCAGCGTCGGCGACCCGTCTGCCGATCGGCATCCGGATAAGCGC 717
consensus_8498#1      CAGGCGATTGCGGTTCTCAGCGTCGGCGACCCCG-------------------------- 694
                      ********************************                            

consensus_8498#0      ATGAAGGCAGCATACAAGGCATACGAAGAGGAGGAATTGAAGC 760
consensus_8498#1      -------------------------------------------