cluster # 8528

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Anopheles gambiae
cluster # 8528 cluster # 8528 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8528#0 length = 2642 sequences # 9

consensus_8528#1 length = 771 sequences # 2

consensusID : consensus_8528#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 2642
fasta sequence

                              [CTTCTATTATTTTCGTGATTTTGCAGAAAACCAACAACAGAAAACGAGCCATCCCACTGCG-GACGAAAATTTGCCGTGTTTTTTCAGCAGCAACAACCACAACCAGTAAGCCAGTGTTTGCACGCCCGCACGCCGTAAGCTAATCACGCCCA-GGCCGCC-GAGCCACCCGATTGCGGCCATGGACACGCTACGGAAGTATCTGGCCCAGGTTAAAGTGCCGTGCGCCACGATAACGTCTACAAGGAGGAGTGTGTTTACTCGTTTGACAATCCGG-AAACGGACACCGGCTTGTACGTG-AGTATGGCCAGCTTTCT-CGGGTTCGGGGAGCAGTACGTGCGCCCGTACGCCGAGCGGTCCGGCAACCGGGTGTTTCTGCATCTGAAGCGCGACAAAATCGAAATCCCCGACCCGTCGGCGGCGGACGGGGCCGGCGGTGCGGATGGGCCGGAGAAAAAGATCACCCGGCTGGCGATCGGGGTGGAGGGCGGGTACACCGGGGCGGAGAGCAAAAAGTACGAGTACCAGGAGCACTACCAGGTGGTGGTGTTCGATGAGCCGGTCGTAAGGTTGGGCTACCCGAACGTGGACCTGCCGCTGCAGGTGCAGAACGCGGTCGAGGCGGTCCAGAAGGCGGAGGCAGCTTCGGTGAAGCGCGAGCG-GGAACAGATGGCCGGCACGTGGGACGGAGAGATCCGGCAGGTGTCGACGCACGCCGCCGAGCTGCTGCAGCTCGACAATGGCAAGAAGATCCCGCCGACCGGCTGGAAGTGCGAAAAGTGCGACCTGACCAGCAACCTCTGGCTGAACCTGACGGACGGTTCGATCATGTGCGGGCGCAAGTTTTTCGACGGCTCGGGCGGCAACGACCATGCGGTGAACCATTACAAGGAGACGAACTACCCGCTGGCGGTGAAGCTGGGCACGATTACGGCCGACGGGAAGGGGGACGTGTACAGCTACAGCGAGGACGACATGGTGGAGGACCCGTACCTGGTGAAGCACTTGGCGCACTGGGGCATCAATGTGGGCCAGCTGGAGAAGACGGAAAAGTCCATGATTGAGCTGGAGCTGGACCTGAACCAGCGGATCGGCGAGTGGGGCATTCTGTGCGAGAGCGGCAGCCAGCTGAAGCCGATCGCAGGGCCGGGGTACACCGGGATGAAGAATCTGGGCAACACGTGCTATCTGAACAGTGTGATGCAGGTGCTGTTTACCATCCCGGACTTTGTGCGCCGGTTCGTCGACGGTTCGAAAGCAATCTTCGACAGCTTCCCGTCCGATCCGGCCAATGATTTTAATGTGCAGATGGCAAAGCTGGGAACGGGATTGTGCAGCGGCCGGTACAGCGTCCTGTCGGAAAGCAGCCTGGACACGGCCGACTCATCCACCGGCGGCATCGCACCGACCATGTTCAAGGCGCTCATTGGCCAGGGCCATCCCGACTTCTCAACCAAGCAGCAGCAGGATGCGCAGGAGTTCTTCCTGCACATTATCAGCACGCTCGAGAAGCACAGCCGCCACCAGGCGAATCCGTCCGAGGCGCTGCGCTTCTGCATCGAGGATCGCGTCGAGTGCTGCTCCAGCGGCAAGGTCATGTACAACCGGCGCGACGAGTGGTGCCTCCCGCTCCAGATTCCCCTCCAGAAGGCAACTAACCTGGACGAGGTGAAGCAGTACGAGGCGGAACGTACCGCAGCCGAGCGCGAGGGCCGTCGGCTCGATCCGGACGCACTGGTGCGGCCGAAAATCACGCTCGCCGCCTGTCTGGACACGTTCGCGCAGCCCGAGCTGGTGGAGCAGTTCTACAGCACGGCGATCGGGGCGAAGACGACGGCCAAAAAGACGACCAAGCTCGCCTCCATGCCCGACTATCTGCTGCTGCATTTGAAGAAGTTCACCCTGAAGGAAGACTGGACCTCGCTCAAGCTGGACGTGGCGATCGACATCCCGGAGGTGCTCGATCTGGAAACGCTGCGCGGCACCGGCAAGCAACCGTACGAGGAAGAGCTGCCGGACATTGCCGGACGTGAGCCAACGCCACCGCCGATGGATCCGGAAGTGATGGAGCAGCTGCTTGGGATGGGCTTCCCGCCCGAGGCTTGCAAGCGGGCCATCTTCTTCACGAAGAACACCGGCATCGAGCCGGCCACCCAGTGGATGATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCCGGTACCGGTGGCAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAGGAGACGGGCAACAACACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATCGATGATGCGACTTCGGACAGTGTTGCAACGTCTGCGGCTGCCGCCGGATCGGACGGTGGAGCTGCGGGCAGCAAGCAGGGTTCGTCGTACCGTGACGGAACTGGCAAATATAAGCTCGTCGCATTTATCTCCCACATGGGCACCTCGTCCCAGGTCGGCCATTACGTTTGCCACATCCTCAAGGACGGCCAGTGGGGTCATTTTTAACGACAACAAGGTGGCGATCTCCCAGAATCCACCCA]

[+] EMBL CNS08Q2O             [CTTCTATTATTTTCGTGATTTTGCAGAAAACCAACAACAGAAAACGAGCCATCCCACTGCGCGACGAAAATTTGCCGTGTTTTTTCAGCAGCAACAACCACAACCAGTAAGCCAGTGTTTGCACGCCCGCACGCCGTAAGCTAATCACGCCCAGGGCCGCCGGAGCCACCCGATTGCGGCCATGGACACGCTACGGAAGTATCTGGCCCAGGTTAAAGTGCCGTGCGCCACGATAACGTCTACAAGGAGGAGTGTGTTTACTCGTTTGACAATCCGGAAAACGGACACCGGCTTGTACGTGAAGTATGGCCAGCTTTCTACGGGTTCGGGGAGCAGTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08H2X             [    tcTTATTTTCGTGATTTTGCAGAAAACCAACGACAGATAACGAGCCATCCCACTGCG GACGAAAATTTGCCGTGTTTTTTCAGCAGCAACAACCACAACCAGTAAGCCAGTGTTTGCACGCCCGCACGCCGTAAGCTAATCACGCCCA GGAAACC GAGCCACCCGATTGCGGCCATGGACACGCTACGGAAGTATCTGGCCCAGGTTAAAGTGCCGTGCGCCACGATAACGTCTACAAGGAGGAGTGTGTTTACTCGTTTGACAATCCGG AAACGGACACCGGCTTGTACGTG AGTTTGGCCAGCTTTCT CGGGTTCGGGGAGCAGTACGTGCGCCCGTACGCCGAGCGGTCCGGCAACCGGGTGTTTCTGCATCTGAAGCGCGACAAAATCGAAATCCCCGACCCGTCGGCGGCGGACGGGGCCGGCGGTGCGGATGGGCCGGAGAAAAAGATCACCCGGCTGGCGATCGGGGTGGAGGGCGGGTACACCGGGGCGGAGAGCAAAAAGTACGAGTACCAGGAGCACTACCAGGTGGTGGTGTTCGATGAGCCGGTCGTAAGGTTGGGCTACCCGAACGTGGACCTGCCGCTGCAGGTGCAGAACGCGGTCGAGGCGGTCCAGAAGGCGGAGGCAGCTTCGGTGAAGCGCGAGCGCGGAACAGATGGCCGGCACGTGGGACGGAGAGATCCGGCAGGTGTCGACGCACGCCGCCGAGCTGCTGCAGCTCGACAATGGCAAGAAGATCCCGCCGACCGGCTGGAAGTGCGAAAAGTGCGACCTGACCAGCAACCTCTGGCTGAACCTGACGGACGGTTCGATCATGTGCGGGCGCAAGTCTTTCGACGGCTCGGGCGGCAACGACCATGCGGTGAACCATTACAAGGAGACGAACTACCCGCTGGCGGTGAAGCTGGGCACGATTACGGCCGACGGGAAGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM603109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cCGGAGAGCAAAAAGTACGAGTACCAGGAGCACTACCAGGTGGTGGTGTTCGATGAGCCGGTCGTAAGGTTGGACTACCCGAACGTGGACCTGCCGCTGCAGGTGCAGAATGCGGTCGAGGCGGTCCAGAAGGCGGAGGCGGCTTCGGTGAAGCGCGAGCG GGAACAGATGGCCGGCACGTGGGACGGGGAGATCCGGCAGGTGTCGACGCACGCCGCCGAGCTGCTGCAGCTCGACAATGGCAAGAAGATCCCGCCGACCGGGTGGAAGTGCGAAAAGTGTGACCTGACCAGCAACCTCTGGCTGAACCTGACGGACGGTTCGATCATGTGCGGGCGCAAGTTTTTCGACGGCTCGGGCGGTAACGACCATGCGGTGAACCATTACAAGGAGACGAACTACCCGCTGGCGGTGAAGCTGGGCACGATTACGGCCGACGGGAAGGGGGACGTGTACAGCTACAGCGAGGACGACATGGTGGAGGACCCGTACCTGGTGAAGCACCTGGCGCACTGGGGCATCAATGTGGGCCAGCTGGAGAAGACGGAAAAGTCCATGATTGAGCTGGAGCTGGACCTGAACCAGCGGATCGGCGAGTGGGGCATTCTGTGCGAGAGCGGCAGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS08H2Y             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTACCAGGTGGTGGTGTTCGATGAGCCGGTCGTAAGGTTGGGCTACCCGAACGTGGCCCTGCCGCTGCAGGTGCAGAACGCGGTCGAGGCGGTCCAGAAGGCGGAGGCAGCTTCGGTGAAGCGCGAGCG GGAACAGATGGCCGGCACGTGGGACGGAGAGATCCGGCAGGTGTCAACGCACGCCGCCGAGCTGCTGCAGCTCGAAAATGGCAAGAAGATCCCGCCGACCGGCTGGAAGTGCGAAAAGTGCGACCTGACCAGCAACCTCTGGCTGAACCTGACGGACGGTTCGATCATGTGCGGGCGCAAGTTTTTCGACGGCTCGGGCGGCAACGACCATGCGGTGAACCATTACAAGGAGACGAACTACCCGCTGGCGGTGAAGCTGGGCACGATTACGGCCGACGGGAAGGGGGACGTGTACAGCTACAGCGAGGACGACATGGTGGAGGACCCGTACCTGGTGAAGCACTTGGCGCACTGGGGCATCAATGTGGGCCAGCTGGAGAAGACGGAAAAGTCCATGATTGAGCTGGAGCTGGACCTGAACCAGCGGATCGGCGAGTGGGGCATTCTGTGCGAGAGCGGCAGCCAGCTGAAGCCGATCGCAGGGCCGGGGTACACCGGGATGAAGAATCTGGGCAACACGTGCTATCTGAACAGTGTGATGCAGGTGCTGTTTACCATCCCGGACTTTGTGCGCCGGTTCGTCGACGGTTCGAAAGCAATCTTCGACAGCTTCCCGTCCGATCCGGCCAATGATTTTAATGTGCAGATGGCAAAGCTGGGAACGGGATTGTGCAGCGGCCGGTACAGCGTCCTGTCGGAAAGCAGCCTGGACACGGCCGACTCATCCACCGGCGGCATCGCACCGACCATGTTCAAGGCGCTCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08Q2P             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTACGGCCGACGGGAAGGGGGACGTGTACAGCTACAGCGAGGACGACATGGTGGAGGACCCGTACCTGGTTAAGCACTTGACGCACTGGGGCATCAATGTGGGCCAGCTGGAGAAGACGGAAAAGTCCATGATTGAGCTGGAGCTGGACCTGAACCAGCGGATCGGCGAGTGGGGCATTCTGTGCGAGAGCGGCAGCCAGCTGAAGCCGATCGCAGGGCCGGGGTACACCGGGATGAAGAATCTGGGCAACACGTGCTATCTGAACAGTGTGATGCAGGTGCTGTTTACCATCCCGGACTTTGTGCGCCGGTTCGTCGACGGTTCGAAAGCAATCTTCGACAGCTTCCCGCCCGATCCGGCCAATGATTTTAATGTGCAGATGGCAAAGCTGGGAACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM618326             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgagGCAATCTTCGACAGCTTCCCGTCCGATCCGGCCAATGATTTTAATGTGCAGATGGCAAAGCTGGGAACGGGATTGTGCAGCGGCCGGTACAGCGTCCTGTCGGAAAGCAGCCTGGACACGGCCGACTCAACCACCGGCGGCATCGCACCGACCATGTTCAAGGCGCTCATTGGCCAGGGCCATCCCGACTTCTCAACCAAGCAGCAGCAGGATGCGCAGGAGTTCTTCCTGCACATTATCAGCACGCTCGAGAAGCACAGCCGCCACCAGGCGAATCCGTCCGAGGCGCTGCGCTTCTGCATCGAGGATCGCGTCGAGTGCTGCTCCAGCGGCAAGGTCATGTACAACCGGCGCGACGAGTGGTGCCTCCCGCTCCAGATTCCCCTCCAGAAGGCAACTAACCTGGACGAGGTGAAGCAGTACGAGGCGGAACGTACCGCAGCCGAGCGCGAGGGCCGTCGGCTCGATCCGGACGCACTGGTGCGGCCGAAAATCACGCTCGCCGCCTGTCTGGACACGTTCGCGCAGCCCGAGCTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM612683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgCGCACCGACCATGTTCAAGGCGCTCATTGGCCAGGGTCATCCCGACTTCTCCACCAAGCAGCAGCAGGACGCGCAGGAGTTCTTCCTGCACATTATCAGCACGCTCGAGAAGCACAGCCGCCACCAGACGAACCCGTCCGAGGCGCTGCGCTTCTGCATCGAGGATCGCGTCGAGTGCTGCTCCAGCGGCAAGGTCATGTACAACCGGCGCGACGAGTGGTGCCTCCCGCTCCAGATTCCCCTCCAAAAGGCAACCAACCTGGACGAGGTGAAGCAGTACGAGGCGGAACGTACCGCAGCGGAGCGCGAGGGCCGCCGGCTCGATCCGGACGCACTGGTGCGGGCGAAAATCACGCTCGCCGCCTGTCTGGACACGTTCGCGCAGCCCGAGCTGGTGGAGCAGTTCTACAGCACGGCGATCGGGGCGAAGACGACGGCCAAAAAGACGACCAAGCTCGCCTCCATGCCCGACTATCTGCTGCTGCATTTGAAGAAGTTCACCCTGAAGGAAGACTGGACCTCGCTCAAGCTGGACGTGGCGATCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX618360             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACTATCTGCTGCTGCATTTGAAAAAGTTCACCCTGAAGGAAGACTGGACCTCGCTCAAGCTGGACGTGGCGATCGACATCCCGGAGGTGCTCGATCTGGAAACGCTGCGCGGCACCGGCAAGCAACCGTACGAGGAAGAGCTGCCGGACATTGCCGGACGTGAGCCAACGCCACCGCCGATGGATCCGGAAGTGATGGAGCAGCTGCTTGGGATGGGCTTCCCGCCCGAGGCTTGCAAGCGGGCCATCTTCTTCACGAAGAACACCGGCATCGAGCCGGCCACCCAGTGGATGATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCCGGTACCGGTGGCAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAGGAGACGGGCAACAACACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATCGATGATGCGACTTCGGACAGTGTTGCAACGTCTGCGGCTGCCGCCGGATCGGACGGTGGAGCTGCGGGCAGCAAGCAGGGTTCGTCGTACCGTGACGGAACTGGCAAATATAAGCTCGTCGCATTTATCTCCCACATGGGCACCTCGTCCCAGGTCGGCCATT                                                                               ]
[+] EMBL BX611232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCCACCGCCGATGGATCCGGAAGTGATGGAGCAGCTGCTTGGGATGGGCTTCCCGCCCGAGGCTTGCAAGCGGGCCATCTTCTTCACGAAGAACACCGGCATCGAGCCGGCCACCCAGTGGATGATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCCGGTACCGGTGGCAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAGGAGACGGGCAACAACACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATCGATGATGCGACTTCGGACAGTGTTGCAACGGCTGCGGCTGCCGCCGGATCGGACGGTGGAGCTGCGGGCAGCAAGCAGGGTTCGTCGTACCGTGACGGAACTGGCAAATATAAGCTCGTCGCATTTATCTCCCACATGGGCACCTCGGCCCAGGTCGGCCATTACGTTTGCCACATCCTCAAGGACGGCCAGTGGGGTCATTTTTAACGACAACAAGGTGGCGATCTCCCAGAATCCACCCA]




>consensus_8528#0
CTTCTATTATTTTCGTGATTTTGCAGAAAACCAACAACAGAAAACGAGCCATCCCACTGC
GGACGAAAATTTGCCGTGTTTTTTCAGCAGCAACAACCACAACCAGTAAGCCAGTGTTTG
CACGCCCGCACGCCGTAAGCTAATCACGCCCAGGCCGCCGAGCCACCCGATTGCGGCCAT
GGACACGCTACGGAAGTATCTGGCCCAGGTTAAAGTGCCGTGCGCCACGATAACGTCTAC
AAGGAGGAGTGTGTTTACTCGTTTGACAATCCGGAAACGGACACCGGCTTGTACGTGAGT
ATGGCCAGCTTTCTCGGGTTCGGGGAGCAGTACGTGCGCCCGTACGCCGAGCGGTCCGGC
AACCGGGTGTTTCTGCATCTGAAGCGCGACAAAATCGAAATCCCCGACCCGTCGGCGGCG
GACGGGGCCGGCGGTGCGGATGGGCCGGAGAAAAAGATCACCCGGCTGGCGATCGGGGTG
GAGGGCGGGTACACCGGGGCGGAGAGCAAAAAGTACGAGTACCAGGAGCACTACCAGGTG
GTGGTGTTCGATGAGCCGGTCGTAAGGTTGGGCTACCCGAACGTGGACCTGCCGCTGCAG
GTGCAGAACGCGGTCGAGGCGGTCCAGAAGGCGGAGGCAGCTTCGGTGAAGCGCGAGCGG
GAACAGATGGCCGGCACGTGGGACGGAGAGATCCGGCAGGTGTCGACGCACGCCGCCGAG
CTGCTGCAGCTCGACAATGGCAAGAAGATCCCGCCGACCGGCTGGAAGTGCGAAAAGTGC
GACCTGACCAGCAACCTCTGGCTGAACCTGACGGACGGTTCGATCATGTGCGGGCGCAAG
TTTTTCGACGGCTCGGGCGGCAACGACCATGCGGTGAACCATTACAAGGAGACGAACTAC
CCGCTGGCGGTGAAGCTGGGCACGATTACGGCCGACGGGAAGGGGGACGTGTACAGCTAC
AGCGAGGACGACATGGTGGAGGACCCGTACCTGGTGAAGCACTTGGCGCACTGGGGCATC
AATGTGGGCCAGCTGGAGAAGACGGAAAAGTCCATGATTGAGCTGGAGCTGGACCTGAAC
CAGCGGATCGGCGAGTGGGGCATTCTGTGCGAGAGCGGCAGCCAGCTGAAGCCGATCGCA
GGGCCGGGGTACACCGGGATGAAGAATCTGGGCAACACGTGCTATCTGAACAGTGTGATG
CAGGTGCTGTTTACCATCCCGGACTTTGTGCGCCGGTTCGTCGACGGTTCGAAAGCAATC
TTCGACAGCTTCCCGTCCGATCCGGCCAATGATTTTAATGTGCAGATGGCAAAGCTGGGA
ACGGGATTGTGCAGCGGCCGGTACAGCGTCCTGTCGGAAAGCAGCCTGGACACGGCCGAC
TCATCCACCGGCGGCATCGCACCGACCATGTTCAAGGCGCTCATTGGCCAGGGCCATCCC
GACTTCTCAACCAAGCAGCAGCAGGATGCGCAGGAGTTCTTCCTGCACATTATCAGCACG
CTCGAGAAGCACAGCCGCCACCAGGCGAATCCGTCCGAGGCGCTGCGCTTCTGCATCGAG
GATCGCGTCGAGTGCTGCTCCAGCGGCAAGGTCATGTACAACCGGCGCGACGAGTGGTGC
CTCCCGCTCCAGATTCCCCTCCAGAAGGCAACTAACCTGGACGAGGTGAAGCAGTACGAG
GCGGAACGTACCGCAGCCGAGCGCGAGGGCCGTCGGCTCGATCCGGACGCACTGGTGCGG
CCGAAAATCACGCTCGCCGCCTGTCTGGACACGTTCGCGCAGCCCGAGCTGGTGGAGCAG
TTCTACAGCACGGCGATCGGGGCGAAGACGACGGCCAAAAAGACGACCAAGCTCGCCTCC
ATGCCCGACTATCTGCTGCTGCATTTGAAGAAGTTCACCCTGAAGGAAGACTGGACCTCG
CTCAAGCTGGACGTGGCGATCGACATCCCGGAGGTGCTCGATCTGGAAACGCTGCGCGGC
ACCGGCAAGCAACCGTACGAGGAAGAGCTGCCGGACATTGCCGGACGTGAGCCAACGCCA
CCGCCGATGGATCCGGAAGTGATGGAGCAGCTGCTTGGGATGGGCTTCCCGCCCGAGGCT
TGCAAGCGGGCCATCTTCTTCACGAAGAACACCGGCATCGAGCCGGCCACCCAGTGGATG
ATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCCGGTACCGGTGGC
AAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTG
ATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAGGAGACGGGCAACAAC
ACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATC
GATGATGCGACTTCGGACAGTGTTGCAACGTCTGCGGCTGCCGCCGGATCGGACGGTGGA
GCTGCGGGCAGCAAGCAGGGTTCGTCGTACCGTGACGGAACTGGCAAATATAAGCTCGTC
GCATTTATCTCCCACATGGGCACCTCGTCCCAGGTCGGCCATTACGTTTGCCACATCCTC
AAGGACGGCCAGTGGGGTCATTTTTAACGACAACAAGGTGGCGATCTCCCAGAATCCACC
CA

consensusID : consensus_8528#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 771
fasta sequence

                              [CAGAATCGCCACGAGGGAAGAACACTGGCATCGAGCCGGCCACCCAGTGGATGATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCTGGTACCGGTGGCAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAAGAGACGGGCAACAACACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATCGATGATGCGACTTCGGACAGTGTTGCAACGGCTGCGGCTGCCGCCGGATCGGACGGTGGAGCTGCGGGCAGTAAGCAGGGTTCGTCGTACCGTGACGGAACTGGAAAATATAAGCTCGTCGCATTTATCTCCCACATGGGCACCTCGGCCCAGGTCGGCCATTACGTTTGCCACATCCTCAAGGACGGCCAGTGGGTCATCTTTAACGACAACAAGGTGGCGATCTCACAGAATCCACCCAAAGAGCTCGGCTACCTGTACCTCTACCAGCGGGTGTAAAATCCTGCTCATGCCGCTGCAGAGGGGAACAGGTTGTACTCCGGCCGTTCCGTCGTTCCGTTTTCTCGTCTTTTTTCATCTTGCGCTGCGCGTCAACGAAGCCCCCGATCCAGCGGGGTGGACTGCAAGCGATGGACTGTGGAACTAATTTACGCTCTATAATTGATATTAAAACGGCGATCGAATTTACCCTTAGGGN]

[+] EMBL BX467460             [CAGAATCGCCACGAGGGAAGAACACTGGCATCGAGCCGGCCACCCAGTGGATGATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCTGGTACCGGTGGCAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAAGAGACGGGCAACAACACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATCGATGATGCGACTTCGGACAGTGTTGCAACGGCTGCGGCTGCCGCCGGATCGGACGGTGGAGCTGCGGGCAGTAAGCAGGGTTCGTCGTACCGTGACGGAACTGGAAAATATAAGCTCGTCGCATTTATCTCCCACATGGGCACCTCGGCCCAGGTCGGCCATTACGTTTGCCACATCCTCAAGGACGGCCAGTGGGTCATCTTTAACGACAACAAGGTGGCGATCTCACAGAATCCACCCAAAGAGCTCGGCTACCTGTACCTCTACCAGCGGGTGTAAAATCCTGCTCATGCCGCTGCAGAGGGGAACAGGTTGTACTCCGGCCGTTCCGTCGTTCCGTTTTCTCGTCTTTTTTCATCTTGCGCTGCGCGTCAACGAAGCCCCCGATCCAGCGGGGTGGACTGCAAGCGATGGACTGTGGAACTAATTTACGCTCTATAATTGATATTAAAACGGCGATCGAATTTACCCTTAGGGN]
[+] EMBL BX618832             [                                                       GGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCTGGTACCGGTGGCAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAAGAGACGGGCAACAACACGGAACGGGCGGTCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_8528#1
CAGAATCGCCACGAGGGAAGAACACTGGCATCGAGCCGGCCACCCAGTGGATGATGGAGC
ACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCTGGTACCGGTGGCAAGAGCA
GCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCTGATGGGCA
TGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAAGAGACGGGCAACAACACGGAAC
GGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGATCGATGATG
CGACTTCGGACAGTGTTGCAACGGCTGCGGCTGCCGCCGGATCGGACGGTGGAGCTGCGG
GCAGTAAGCAGGGTTCGTCGTACCGTGACGGAACTGGAAAATATAAGCTCGTCGCATTTA
TCTCCCACATGGGCACCTCGGCCCAGGTCGGCCATTACGTTTGCCACATCCTCAAGGACG
GCCAGTGGGTCATCTTTAACGACAACAAGGTGGCGATCTCACAGAATCCACCCAAAGAGC
TCGGCTACCTGTACCTCTACCAGCGGGTGTAAAATCCTGCTCATGCCGCTGCAGAGGGGA
ACAGGTTGTACTCCGGCCGTTCCGTCGTTCCGTTTTCTCGTCTTTTTTCATCTTGCGCTG
CGCGTCAACGAAGCCCCCGATCCAGCGGGGTGGACTGCAAGCGATGGACTGTGGAACTAA
TTTACGCTCTATAATTGATATTAAAACGGCGATCGAATTTACCCTTAGGGN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8528#0      CTTCTATTATTTTCGTGATTTTGCAGAAAACCAACAACAGAAAACGAGCCATCCCACTGC 60
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GGACGAAAATTTGCCGTGTTTTTTCAGCAGCAACAACCACAACCAGTAAGCCAGTGTTTG 120
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CACGCCCGCACGCCGTAAGCTAATCACGCCCAGGCCGCCGAGCCACCCGATTGCGGCCAT 180
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GGACACGCTACGGAAGTATCTGGCCCAGGTTAAAGTGCCGTGCGCCACGATAACGTCTAC 240
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      AAGGAGGAGTGTGTTTACTCGTTTGACAATCCGGAAACGGACACCGGCTTGTACGTGAGT 300
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      ATGGCCAGCTTTCTCGGGTTCGGGGAGCAGTACGTGCGCCCGTACGCCGAGCGGTCCGGC 360
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      AACCGGGTGTTTCTGCATCTGAAGCGCGACAAAATCGAAATCCCCGACCCGTCGGCGGCG 420
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GACGGGGCCGGCGGTGCGGATGGGCCGGAGAAAAAGATCACCCGGCTGGCGATCGGGGTG 480
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GAGGGCGGGTACACCGGGGCGGAGAGCAAAAAGTACGAGTACCAGGAGCACTACCAGGTG 540
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GTGGTGTTCGATGAGCCGGTCGTAAGGTTGGGCTACCCGAACGTGGACCTGCCGCTGCAG 600
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GTGCAGAACGCGGTCGAGGCGGTCCAGAAGGCGGAGGCAGCTTCGGTGAAGCGCGAGCGG 660
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GAACAGATGGCCGGCACGTGGGACGGAGAGATCCGGCAGGTGTCGACGCACGCCGCCGAG 720
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CTGCTGCAGCTCGACAATGGCAAGAAGATCCCGCCGACCGGCTGGAAGTGCGAAAAGTGC 780
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GACCTGACCAGCAACCTCTGGCTGAACCTGACGGACGGTTCGATCATGTGCGGGCGCAAG 840
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      TTTTTCGACGGCTCGGGCGGCAACGACCATGCGGTGAACCATTACAAGGAGACGAACTAC 900
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CCGCTGGCGGTGAAGCTGGGCACGATTACGGCCGACGGGAAGGGGGACGTGTACAGCTAC 960
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      AGCGAGGACGACATGGTGGAGGACCCGTACCTGGTGAAGCACTTGGCGCACTGGGGCATC 1020
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      AATGTGGGCCAGCTGGAGAAGACGGAAAAGTCCATGATTGAGCTGGAGCTGGACCTGAAC 1080
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CAGCGGATCGGCGAGTGGGGCATTCTGTGCGAGAGCGGCAGCCAGCTGAAGCCGATCGCA 1140
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GGGCCGGGGTACACCGGGATGAAGAATCTGGGCAACACGTGCTATCTGAACAGTGTGATG 1200
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CAGGTGCTGTTTACCATCCCGGACTTTGTGCGCCGGTTCGTCGACGGTTCGAAAGCAATC 1260
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      TTCGACAGCTTCCCGTCCGATCCGGCCAATGATTTTAATGTGCAGATGGCAAAGCTGGGA 1320
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      ACGGGATTGTGCAGCGGCCGGTACAGCGTCCTGTCGGAAAGCAGCCTGGACACGGCCGAC 1380
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      TCATCCACCGGCGGCATCGCACCGACCATGTTCAAGGCGCTCATTGGCCAGGGCCATCCC 1440
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GACTTCTCAACCAAGCAGCAGCAGGATGCGCAGGAGTTCTTCCTGCACATTATCAGCACG 1500
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CTCGAGAAGCACAGCCGCCACCAGGCGAATCCGTCCGAGGCGCTGCGCTTCTGCATCGAG 1560
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GATCGCGTCGAGTGCTGCTCCAGCGGCAAGGTCATGTACAACCGGCGCGACGAGTGGTGC 1620
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CTCCCGCTCCAGATTCCCCTCCAGAAGGCAACTAACCTGGACGAGGTGAAGCAGTACGAG 1680
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      GCGGAACGTACCGCAGCCGAGCGCGAGGGCCGTCGGCTCGATCCGGACGCACTGGTGCGG 1740
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CCGAAAATCACGCTCGCCGCCTGTCTGGACACGTTCGCGCAGCCCGAGCTGGTGGAGCAG 1800
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      TTCTACAGCACGGCGATCGGGGCGAAGACGACGGCCAAAAAGACGACCAAGCTCGCCTCC 1860
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      ATGCCCGACTATCTGCTGCTGCATTTGAAGAAGTTCACCCTGAAGGAAGACTGGACCTCG 1920
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CTCAAGCTGGACGTGGCGATCGACATCCCGGAGGTGCTCGATCTGGAAACGCTGCGCGGC 1980
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      ACCGGCAAGCAACCGTACGAGGAAGAGCTGCCGGACATTGCCGGACGTGAGCCAACGCCA 2040
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      CCGCCGATGGATCCGGAAGTGATGGAGCAGCTGCTTGGGATGGGCTTCCCGCCCGAGGCT 2100
consensus_8528#1      ------------------------------------------------------------
                                                                                  

consensus_8528#0      TGCAAGCGGGCCATCTTCTTCACG-AAGAACACCGGCATCGAGCCGGCCACCCAGTGGAT 2159
consensus_8528#1      ------CAGA--ATCGCCACGAGGGAAGAACACTGGCATCGAGCCGGCCACCCAGTGGAT 52
                            * *   ***  *   * * ******** **************************

consensus_8528#0      GATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCCGGTACCGGTGG 2219
consensus_8528#1      GATGGAGCACATTGCCGATGCGGACTTTGCCAGCCCGTTCGTTCCGCCTGGTACCGGTGG 112
                      ************************************************ ***********

consensus_8528#0      CAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCT 2279
consensus_8528#1      CAAGAGCAGCTCGGCGGCCGGGGCCGCCTTCGTACCCAATCCGGTCGGGCTGGAGATGCT 172
                      ************************************************************

consensus_8528#0      GATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAGGAGACGGGCAACAA 2339
consensus_8528#1      GATGGGCATGGGTTTCTCCGACCGTCAGGCTACGAAAGCGCTCAAAGAGACGGGCAACAA 232
                      ********************************************* **************

consensus_8528#0      CACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGAT 2399
consensus_8528#1      CACGGAACGGGCGGTCGATTGGATCTTTTCCCACACCGACGAGCTGGACAGTATGGCGAT 292
                      ************************************************************

consensus_8528#0      CGATGATGCGACTTCGGACAGTGTTGCAACGTCTGCGGCTGCCGCCGGATCGGACGGTGG 2459
consensus_8528#1      CGATGATGCGACTTCGGACAGTGTTGCAACGGCTGCGGCTGCCGCCGGATCGGACGGTGG 352
                      ******************************* ****************************

consensus_8528#0      AGCTGCGGGCAGCAAGCAGGGTTCGTCGTACCGTGACGGAACTGGCAAATATAAGCTCGT 2519
consensus_8528#1      AGCTGCGGGCAGTAAGCAGGGTTCGTCGTACCGTGACGGAACTGGAAAATATAAGCTCGT 412
                      ************ ******************************** **************

consensus_8528#0      CGCATTTATCTCCCACATGGGCACCTCGTCCCAGGTCGGCCATTACGTTTGCCACATCCT 2579
consensus_8528#1      CGCATTTATCTCCCACATGGGCACCTCGGCCCAGGTCGGCCATTACGTTTGCCACATCCT 472
                      **************************** *******************************

consensus_8528#0      CAAGGACGGCCAGTGGGGTCATTTTTAACGACAACAAGGTGGCGATCTCCCAGAATCCAC 2639
consensus_8528#1      CAAGGACGGCCAGTGGG-TCATCTTTAACGACAACAAGGTGGCGATCTCACAGAATCCAC 531
                      ***************** **** ************************** **********

consensus_8528#0      CCA--------------------------------------------------------- 2642
consensus_8528#1      CCAAAGAGCTCGGCTACCTGTACCTCTACCAGCGGGTGTAAAATCCTGCTCATGCCGCTG 591
                      ***                                                         

consensus_8528#0      ------------------------------------------------------------
consensus_8528#1      CAGAGGGGAACAGGTTGTACTCCGGCCGTTCCGTCGTTCCGTTTTCTCGTCTTTTTTCAT 651
                                                                                  

consensus_8528#0      ------------------------------------------------------------
consensus_8528#1      CTTGCGCTGCGCGTCAACGAAGCCCCCGATCCAGCGGGGTGGACTGCAAGCGATGGACTG 711
                                                                                  

consensus_8528#0      ------------------------------------------------------------
consensus_8528#1      TGGAACTAATTTACGCTCTATAATTGATATTAAAACGGCGATCGAATTTACCCTTAGGGN 771