|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1215 fasta sequence
[CCGGGCGTTGTGTGTTTTGGTAACGGCGCAATTGAACAGCACCACCATTCCGACGACGAGCGACGCTACAC-------CCAAAGGCGGAAAAGCGTTTGCGCGT-TTTGCGAATTGTTTGATGAAATTA-TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG-CTCGCCTC-GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC-AG-GCAG-AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT-GGAGA-CGGGAGGGCAGCTGCAGTTGCTCCGC-ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC-GGGGACAAGCTGTACA-GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCGAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCAATGCAACAAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAAGTCTGGCGTCGTTCCGAAAAGCAAAATGATGCAATCGTGGCTGATTGTTAAGAAGCGAAAGCATGACGAGGGCGAAGAACAGCCCCCAGCTTTGGAGGGTACGGTAAAGCAGGAATTGAAGACGGAACCGGTGGACAAGAAACCGAAACCGGATCCCGATGTGCCATGAAGCAGATAAGTTACC-TTAATTTGTTTATGAATTTATCGAGAGAAATAAAACTCTTTGATGTATGTTGCTAAAA]
[+] EMBL BM592903 [CCGGGCGTTGTGTGTTTTGGTAACGGCGCAATTGAACAGCACCACCATTCCGACGACGAGCGACGCTACAC CCAAAGGCGGAAAAGCGTTTGCGCGT TTTGCGAATTGTTTGATGAAATTA TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCGACTCGCCTCGGGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGCAAG GCAG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCTGGGAGA CGGGAGGGCAGCTGCAGTTGCTCCGCAATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAACGGGGGACAAGCTGTACAGGCTA ]
[+] EMBL BX606110 [ TGGTAACGGCGCAATTGAACAGCACCACCATTCCGACGACGAGCGACGCTACAC CCAAAGGCGGAAAAGCGTTTGCGCGT TTTGCGAATTGTTTGATGAAATTATTTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACAGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCCGCCGATCGGTTGCTGGTGCCGATGATGTGGGGCATGGTACCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAGCGGTGTGTCATACTT ]
[+] EMBL BX606948 [ AACGGCGCAATTGAACAGCACTACCATTCCGACGGCGAGCGACGCTACACCCGAAGGCCAAAGGCAGAAAAGCGTTTGCGCGT TTTGCGAATTGTTTGATGAAATTA TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGG ]
[+] EMBL CNS09OTW [ AGCACCACCATTCCGACGACGAGCGACGCTACAC CCAAAGGCGGAAAAGCGTTTGCGCGTATTTGCGAATTGTTTGATGAAATTA TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC AG AGTAGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTGCTCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCGAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCAATGCAACAAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAAGTCTGGCGTCGTTCCGAAAAGCAAAATGATGCAATCGTG ]
[+] EMBL CNS09CME [ CCATTCCGACGACGAGCGACGCTACAC CCAAAGGCGGAAAAGCGTTTGCGCGT TTTGCGAATTGTTTGATGAAATTA TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC AG AG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTGCTCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCAAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCAATGCAACAAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAAGTCTGGCGTCGTTCCGAAAAGCAAAATGATGCAATCGTGGCTGATTGTTAAGAAGCGAAA CATGACGA ]
[+] EMBL CNS092VA [ CGACGAGCGACGCTACAC CCAAAGGCGGAAAAGCGTTTGCGCGT TTTGCGAATTGTTTGATGAAATTA TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC AGAGC AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTGCTCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCGAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCAATGCAACAAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAAGTCTGGCGTCG ]
[+] EMBL BX604676 [ AAGCGTTTGCGCGT TTTGCGAATTGTTTGATGAAATTA TTGGAAAACCATGTGTGGCCGCACGTGTTTGACACTGGAACCGAAAGAGCTGGAAAGCTGCTGCAAGTACAACAAAAGCGGACAAAACAAACCGAAACAACCGCGCTACCGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCCGCCGATCGGTTGCTGGTGCCGATGATGTGGGGCATGGTACCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGTTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTACGTGCACGCGCCGC AG GCAG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTGCTCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAACTGTAC ]
[+] EMBL BX618133 [ AAACCGAAACAACCGCGCTACAGAAATGAGTTCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCGACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCCGCCGATCGGTTGCTGGTGCCGATGATGTGGGGCATGGTACCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAGCGGTGTGTCATACTTTGCGAAGGTTTCTACTAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTACGTGCACGCGCCGC AG GCAG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTGCTCCGC ATTGCCGGCCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGGGTCAGTTCGCGAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAAC ]
[-] EMBL CNS09CMF [ TCAATTGTGGGAAAAAGTACGTCCCTTCGTTTAATGTAGCCCCCACGGACGTAACGCCAGTGCTTGTTTCCGCCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC AG GCAG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTGCTCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCAAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCAAAAAAAAAAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAAGTCTGGCGTCGTTCCGAAAAGCAAAATGATGCAATCGTGGCTGATTGTTAAGAAGCGAAAGCATGACGAGGGCGAAGAACAGCCCCCAGCTTTGGAGGGTACGGTAAAGCAGGAATTGAAGACGGAACCGGTGGACAAGAAACCGAAACCGGATCCCGATGTGCCATGAAGCAGATAAGTTACC TTAATTTGTTTATGAATTTATCGAGAGAAATAAAACTCTTTGATGT ]
[-] EMBL CNS092VB [ CCCTGCACTTTGATGAGTCGGCCGATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGCACAAGGGTGACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTTTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC AG GCAG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGAGCGGGGGGGCAGCTGCAGTTG TCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCGAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCACCCCCCCCAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAAGTCTGGCGTCGTTCCGAAAAGCAAAATGATGCAATCGTGGCTGATTGTTAAGAAGCGAAAGCATGACGAGGGCGAAGAACAGCCCCCAGCTTTGGAGGGTACGGTAAAGCAGGAATTGAAGACGGAACCGGTGGACAAGAAACCGAAACCGGATCCCGATGTGCCATGAAGCAGATAAGTTACCGTTAATTTGTTTATGAATTTATCGAGAGAAATAA ]
[-] EMBL CNS09OTX [ ATTCAGCCGATCGGTTGCTGGTGCCTATGATGTGGGGCATGGTTCCACGCTGGAACAAGGGTAACTTCCGGAAGCACGGCCTAACCACGAACAACTGCCGGCTGGAGGGTTTGGCGTTCTCGAAACTGTACGGACCACCG CTCGCCTC GGGCCAACGGTGTGTCATACTTTGCGAAGGCTTCTACGAATGGCAAACGGTAAAACCGCTGAAGCCCTCCGAACGGGCCGCCTTCTTCGTGCACGCGCCGC AG GCAG AGAAGGTCAAGATGGAGGACAAATCCACCTGGCAGCT GGAGA CGGGAGGGCAGCTGCAGTTG TCCGC ATTGCCGGGCTGTTCGATGTGTGGAACGACGAGAAC GGGGACAAGCTGTACA GCTACACGGTGATCACGTTCGAAACGGAGAGTCAGTTCGCGAGCATACACCATCGATCGCCGGCCATTCTCGAGACCGATGCACAGGTGGCGGACTGGTTGGATTTTAAGCGTGTGCCAGCGAACCGAGCGCTCAATCTTTTGCAACCATGCCAAGCGCTGAAGTGGTACCGCGTGTCGAACGTGGTGAACAATTCGCGCAACAAATCGGACCAACCCAAAAAACCGCTCGAGCAGGGTAAATCGGGTGACGGAAGCGGCAATTCTGGCGTCGTTCCGAAAAGCAAAATGATGCAATCGTGGCTGATTGTTAAGAAGCGAAAGCATGACGAGGGCGAAGAACAGCCCCCAGCTTTGGAGGGTACGGTAAAGCAGGAATTGAAGACGGAACCGGTGGACAAGAAACCGAAACCGGATCCCGATGTGCCATGAAGCAGATAAGTTACC TTAATTTGTTTATGAATTTATCGAGAGAAATAAAAATCTTTGATGTATGTTGCTAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||