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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1415 fasta sequence
[CTTTCGGTCGTCCACACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATC-AATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACC-AACCCTGGCGTGAGCTATCGCCCCCAACCGGT-AGAAGCGGAAGGCATCAATAGCATCCAGTA-CGTGGCGGCCAACAAATC-GGACG-TTGCGGTGTGGGTCAACATGCTC-AACGATTTTCTGGCACCGTACGCGGATCATACATT-GCT-GCCCGGAGGTGGC-AAG-AATCAGGTGATCTGTGACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCC-TCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGATCTGGCGTCTCACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGTGTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTTT-CCAGCGTACTACTACCCATACATGAACATCGACGGCTATCTGAGCCCACTCGTCGCCGTACATCTTGCCCGACCGAAGCCGAAAACGACCATCAGCATCGAGTGCCGTGCCTGGGCGAAAAACATTATCTACCGCGGAGGTAGTCGCGATCGGGCCGGGTCGGTACAGCTATTCCTGCGTATTGATTAGATAGCGCTGCGGCTGATTCCCACCGACCAATGTGACAATGTCGAATTGTTGTTTCATTTTTTTAACGTGTTACGTTGATCCGTTTTGCTGAACGCAGCGACACAAGGGGACGAGAATTCATTAGAAACAAATTACATCGCAGCCAGACGCCCGCCCGATCATCCTTCCACAACGCACGTGTGCTATGAAGAGTTTACTTAAACGTTTTAGTGAAGTGAGAAAAATCAATAAATGTATGTTTGTTTGGAAAAAAAAAAAA]
[+] EMBL CNS08XAM [CTTTCGGTCGTCCACACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATC AATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACC AACCCTGGCGTGAGCTATCGCCCCCAACCGGT AGAAGCGGAAGGCATCAATAGCATCCAGTA CGTGGCGGCCAACAAATC GGACG TTGCGGTGTGGGTCAACATGCTC AACGATTTTCTGGCACCGTACGCGGATCATACATT GCT GCCCGGAGGTGGC AAG AATCAGGTGATCTGTGACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCC TCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGATCTGGCGTCTCACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGTGTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTTT CCAGC ]
[+] EMBL BM615032 [ CCGCACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATCAAATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACCAAACCCTGGCGTGAGCTATCGCCCCCAACCGGTAAGAAGCGGAAGGCATCAATAGCATCCAGTAGTGTGGCGGCCAACAAATCGGGACGTTTGCGGTGTGGGTCAACATGCTCAAACGATTTTCTGGCACCGTACGCGGATCATACATTGGCTGGCCCGGAGGTGGCAAAGAAATCAG ]
[+] EMBL CNS095CR [ GTA ACGTCTGGCTGAAAAGACGCAACCAACAGCAGCACGACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAACCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTTACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACGTACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAACTCGCAGGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGCCTGCTTCTACACCGTTCTGGCGGCACTGTTCGCCATCTGTATGCAGGGGCTGCTGGTCACGCTGAACCATC AATACCCGAAGTGGCAGCTGGATGAGTCGCGCATCGGTACC AACCCTGGCGTGAGCTATCGCCCCCAACCGGT AGAAGCGGAAGGCATCAATAGCATCCAGTA TGTGGCGGCCAACAAATC GGACG TTGCGGTGTGGGTCAACATGCTC AACGATTTTCTGGCACCGTACGCGGATCATACATT GCT GCCCGGAGGTGGC AAG AATCAGGTGATCTGTGACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCCTTCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGATCTGGCGTCTCAAATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAAGTGTGGGTGACGTGCAAAGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTT ]
[-] EMBL CNS08XAN [ TGGATGAGTCGCGCATCGGTACC AACCCTGGCGTGAG TATCGCCCCCAACCGGT AGAAGCGGAAGGCATCAATAGCATCCAGTA CGTGGCGGCCAACAAATC GGACG TTGCGGTGTGGGTCAACATGCTC AACGATTTTCTGGCACCGTACGCGGATCATACATT GCT GCCCGGAGGTGGC AAG AATCAGGTGATCTGTGACTTCAAAACTCCACCAACGGCCGGCAACGTGTGTGCC TCGATGTGAAGAACCTTGGCCCGTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCTCAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGACATGCCCGACGTTCTGGCGTCTAACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGTGTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATACCTGCCGAGCCAAGGTTTCCCAGCGTACTACTACCCATACATGAACATCGACGGCTATCTGAGCCCACTCGTCGCCGTACATCTTGCCCGACCGAAGCCGAAAACGACCATCAGCATCGAGTGCCGTGCCTGGGCGAAAAACATTATCTACCGCGGAGGTAGTCGCGATCGGGCCGGGTCGGTACAGCTATTCCTGCGTATTGATTAGATAGCGCTGCGGCTGATTCCCACCGACCAATGTGACAATGTCGAATTGTTGTTTCATTTTTTTAACGTGTTACGTTGATCCGTTTTGCTGAACGCAGCGACACAAGGGGACGAGAATTCATTAGAAACAAATTACATCGCAGCCAGACGCCCGCCCGATCATCCTTCCACAACGCACGTGTGCTATGAAGAGTTTACTTAAACGTTTTAGTGAAGTGAGAAAAATCAATAAATGTATGTTTGTTTGGAAAAAAAAAAAA]
consensusID : consensus_8653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1003 fasta sequence
[ATGGGTCGAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCG-CCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG-CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA-GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAAGTCGGTCGCCAAGCGCAG-CGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACCGAAGCGGCGATGAAGAAGATCGAGGACAACAACACGCTCGTCTTCCTGATTCACCTGCGCGCCAACAAGAACCACGTGAAGGCCGCCGTGAGGAAGCTGTACGACGTGAAGGTGCTGAAGAT]
[+] EMBL CNS09NFI [ATGGGTCGAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCG CCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCCGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAAGTCGGTCGCCAAGCGCAG CGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACCGAAGCGGCGATGAAGAAGATCGAGGACAACAACACGCTCGTCTTCCTGATTCACCTGCGCGCCAACAAGAACCACGTGAAGGCCGCCGTGAGGAAGCTGTACGACGTGAAGGTGCTGAAGAT]
[+] EMBL CNS09G97 [ AAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGAAAAGAAAGAGAAGAAGCCGGCAGCCGCCGTCCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGG CAAGAAGGATGCCAAGAATGGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGT ]
[+] EMBL CNS09I67 [ AGAAGAAGCCGGCAGCCGCCG CCGCTGCTACGGCTTCCGGATCTGGTGAGAAGAAACCCGCAGCGGAAAAGAAG CCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCC ]
[+] EMBL CNS099O6 [ GGTGAGAAGAAA CCGCAGCGGAAAAGAAGCCCCGCGGC GGAGAAGAAGCCAGCAGCTGAGAAGAAGCCAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCGCTCCGAAGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGGCCAAGAAGGATGCCAAGAA GGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCAAGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGAAGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCAAGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGGCTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATGCCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGAAGGCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCCAAGCGTGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTCCGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAAGTCGGTCGCCAAGCGCAGCCGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACCGAAGCGGCGATGAA ]
consensusID : consensus_8653#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence
[CGAAGGTTGTATTTCTTTTCTCTTTCTCTCTCCGCGTTCCTCGCTGCTTCAAACACACTCCTATACTTGTTGGAAAATTAGATTGTAGTCAAACCACACCGTACCATCCAGCACTTGGTTGGTGGGCTGACATTTTTCACGACCACCCCCTCAACACCGGACAAGCATCGGCGCAGATATTTAAACGGACGCCTGTACTGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGGAAGCGGCACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCATCACCGTGCAATTCCATCAGACTGGACAGATCGAATCGCGGCTTCTTCACGCTTGATGATGGCCGTCATCTTCGCGCGAATGTTCTTGATCTGCGAGTGCTGGGCGTAGAGGTCTTGCGCTGCGACATCGAGTCCTTGATGGTGAAGCCGATGCAGAACACGCGCAGATGAAGCCATCGGTGGTCTTGACGTCGACCGAGCACTCGATCAGGGTTTGCCATTTCTTGACCATGGATCGCAGCTTGTCGGTCGTCAACGCCATACCGTGGAAGTAGGTAAGGACATCACGGACGT]
[+] EMBL CNS08DFA [CGAAGGTTGTATTTCTTTTCTCTTTCTCTCTCCGCGTTCCTCGCTGCTTCAAACACACTCCTATACTTGTTGGAAAATTAGATTGTAGTCAAACCACACCGTACCATCCAGCACTTGGTTGGTGGGCTGACATTTTTCACGACCACCCCCTCAACACCGGACAAGCATCGGCGCAGATATTTAAACGGACGCCTGTACTGGTGGTTCGTAGCCTTCCGGACGGTCGACGACGACACCGGAAGCGGCACCGGTCGACACTTCAGCAGCCTTGCCGCCGCCATCACCGTGCAATTCCATCAGACTGGACAGATCGAATCGCGGCTTCTTCACGCTTGATGATGGCCGTCATCTTCGCGCGAATGTTCTTGATCTGCGAGTGCTGGGCGTAGAGGTCTTGCGCTGCGACATCGAGTCCTTGATGGTGAAGCCGATGCAGAACACGCGCAGATGAAGCCATCGGTGGTCTTGACGTCGACCGAGCACTCGATCAGGGTTTGCCATTTCTTGACCATGGATCGCAGCTTGTCGGTCGTCAACGCCATACCGTGGAAGTAGGTAAGGACATCACGGACGT]
consensusID : consensus_8653#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence
[GTACCATGGCGGTCGGCAAAAATAAGGGTGTCTCGAAAGGAGGCAAGAAAGGTTCGAAAAAGAAGGTCGTGGATCCGTTCACGCGCAAGGATTGGTACGATGTGGAGGCCTCGAACGAGCCCGATGCGGAGAGATCTTTCCGCAAGTTCAAGCTGGTGGCGGAGAGCGTGAACGGCCGTGATGTCCTTACCAACTTCCACGGTATGGCGTTGACGACCGACAAGCTGCGATCCATGGTCAAGAAATGGCAAACCCTGATCGAGTGCTCGGTCGACGTCAAGACCACCGATGGCTTCATGCTGCGCGTGTTCTGCATCGGCTTCACCATCAAGGACTCGATGTCGCAGCGCAAGACCTGCTACGCCCAGCACTCGCAGATCAAGAACATTCGCGCGAAGATGACGGCCATCATCAAGCGTGAAATCACCAGCAC]
[+] EMBL CNS09BQO [GTACCATGGCGGTCGGCAAAAATAAGGGTGTCTCGAAAGGAGGCAAGAAAGGTTCGAAAAAGAAGGTCGTGGATCCGTTCACGCGCAAGGATTGGTACGATGTGGAGGCCTCGAACGAGCCCGATGCGGAGAGATCTTTCCGCAAGTTCAAGCTGGTGGCGGAGAGCGTGAACGGCCGTGATGTCCTTACCAACTTCCACGGTATGGCGTTGACGACCGACAAGCTGCGATCCATGGTCAAGAAATGGCAAACCCTGATCGAGTGCTCGGTCGACGTCAAGACCACCGATGGCTTCATGCTGCGCGTGTTCTGCATCGGCTTCACCATCAAGGACTCGATGTCGCAGCGCAAGACCTGCTACGCCCAGCACTCGCAGATCAAGAACATTCGCGCGAAGATGACGGCCATCATCAAGCGTGAAATCACCAGCAC]
consensusID : consensus_8653#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence
[TTTTGAGCCAAGAAACGCAGAGACGGCTCAATGATACCACCACGGAGTCGCAGCACCAGAAGAAGGGTCGATTCCTTCTGAATGTTGTTGTTGGAGAGAGTTCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGAACTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTTCGAAGCTCGACCTCAAGTTTTAGGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTTTCCAACGTGTCTTTTCGCTGGTACACTTTGACAGGAAAAAAGCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCT]
[+] EMBL CNS08LHF [TTTTGAGCCAAGAAACGCAGAGACGGCTCAATGATACCACCACGGAGTCGCAGCACCAGAAGAAGGGTCGATTCCTTCTGAATGTTGTTGTTGGAGAGAGTTCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGAACTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTTCGAAGCTCGACCTCAAGTTTTAGGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTTTCCAACGTGTCTTTTCGCTGGTACACTTTGACAGGAAAAAAGCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 CTTTCGGTCGTCCACACGTGCGTACACGTCTGGCTGAAAAGACGCAACCAACAGCAGCAC 60
consensus_8653#1 ------------------------------------------------------------
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 GACAGTTGAAACCGAGCGGACGCCAAGAAGGCCTCGTGTCGTGATAGTGAAGCATACGAA 120
consensus_8653#1 ---------------ATGGGTCGAGAAACCGTCTGAGAAGCCCGCCGGCCAACCGGCCGA 45
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 CCACAGTGGCCGCACAGTTCTTTTCGCAGTGGTAGCATTAGCAAATAATTTCGGATCCTT 180
consensus_8653#1 AAAGAAAGAGAAGAAGCCGGCAGCCGCCGCCGCTGCTACGGCTTCCGGATCTGGTGAGAA 105
consensus_8653#2 -----------------------------------------------CGAAGGTTGTATT 13
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 ACTTACGGCTCAAAAATGCCTGCAGAAAAGCGCTCTAGTCAACCGCGGATCGTACGGACG 240
consensus_8653#1 GAAACCCGCAGCGGAAAAGAAGCCCGCGGCGGGAGAAGAAGCCAGCAGCTGAGAAGAAGC 165
consensus_8653#2 TCTTTTCTCTTTCTCTCTCCGCGTTCCTCGCTGCTT--CAAACACACTCCTATACTTGTT 71
consensus_8653#3 ----------------------GTACCATGGCGGTCGGCAAAAATAAGGGTGT-CTCGAA 37
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 TACGAGTTTCCAACGAAACCCGAAAAGCAGACGCTCGGCCAGTATCTCTACAA-CTCGCA 299
consensus_8653#1 CAGCGGCTGCACCAGCTGAGAAGAAGCCCGCTGCCGAGAAGAAGCAAGGCCG--CTCCGA 223
consensus_8653#2 GGAAAATTAGATTGTAGTCAAACCACACCGTACCATCCAGCACTTGGTTGGTGGGCTGAC 131
consensus_8653#3 AGGAGGCAAGAAAG-GTTCGAAAAAGAAGGT------CGTGGATCCGTTCACGCGCAAGG 90
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 GGATGGCAAAATTCTTGGCCGCACGTCCAAAGGCTGGGCACAGCTACTGTTCTTCTATGC 359
consensus_8653#1 AGAAGAAGGCACCGGCTGCCGCCGCCGCTGCTGCTGGAACCAGCAAGCCTGCCGGTGAGG 283
consensus_8653#2 ATTTTTC-ACGACCACCCCCTCAACACCGGACAAGCATCG-GC-GCAGATATTTAAACGG 188
consensus_8653#3 ATTGGT--ACGAT----GTGGAGGCCTCGAACGAGCCCGATGC-GGAGAGATCTTTCCGC 143
consensus_8653#4 ------------------------TTTTGAGC---CAAGAAAC-GCAGAGACGGCTCAAT 32
consensus_8653#0 CTGCTTC-TACACCGTTCTGGCGGCACTGTTCGCCATCTGTAT-GCAGGGGCTGCTGGTC 417
consensus_8653#1 CCAAGAAGGATGCCAAGAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGGCGCTGCTGGCA 343
* * * *
consensus_8653#2 ACGCCTGTACTGGTGGTTCGTAGCCTTCCGG-ACGGTCGACGACGACACCGGAAGCGGCA 247
consensus_8653#3 AAGTTCAAGCTGGTGGCGGAGAGCGT---GA-ACGGCCG-TGATGTCCTTACCAACTTCC 198
consensus_8653#4 GATACCACCACGGAGTCGCAGCACCAGAAGA-AGGGTCG--ATTCCTTCTGAATGTTGTT 89
consensus_8653#0 ACG-CTGAACCATCAATACCCGAAGTGGCAG-CTGGATGAGTCGCGCATCGGTACCAACC 475
consensus_8653#1 AGAAGGGAGCCAAGGCTGCCCCGGCCGCTGCTGCTGCCGCTGCCGCCGCTGGCAAGAAGA 403
* *
consensus_8653#2 --CCGGTCGACACTTCAGCAGCC-TTGCCGCCGC---------CATC-ACCGTGCAATTC 294
consensus_8653#3 --ACGGTATG-GCGTTGACGACC-GACAAGCTGC---------GATCCATGGTCAAGAAA 245
consensus_8653#4 --GTTGGAGAGAGTTCGACCATC-CTCCAGCTGC---------TTGC--CGGCGAAGATC 135
consensus_8653#0 --CTGGCGTGAGCTATCGCCCCC-AACCGGTAGAAGCGGAAGGCATCAATAGCATCCAGT 532
consensus_8653#1 AGGCCGCAGAGAAGAAGGGAGCTGCTGCCGCAGCCGCCGCCGACAAGAAGGGCGCTGCCA 463
* * * *
consensus_8653#2 CATCAG-ACTGGACAGATCGAAT--CGCGGCTT-CTTCACGCTTGATGATGGCCGTCATC 350
consensus_8653#3 TGGCAA-ACC---CTGATCGAGTG-CTCGGTCGACGTCAAGACCACCGATGGCTTCATGC 300
consensus_8653#4 AAACGCTGCTGAACTGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCG 195
consensus_8653#0 ACGTGGCGGCCAACAAATCGGACGTTGCGGTGTGGGTCAACATGCTCAACGATTTTCTGG 592
consensus_8653#1 AGCCCGCTGCCAAGGGAGCTAAGGCTGCGGCCGGTGCCGGTGCCAAGGGTGGCAAAGCGG 523
consensus_8653#2 TTCGCGCGA-----ATGTTCTTGATCTGCGAGTGCTGGGCGTAGAGGT-CTTGCGCTGCG 404
consensus_8653#3 TGCGCGTGTTCTGCATCGGCTTCACCATCAAGGACTCGATGTCGCAGCGCAAGACCTGCT 360
consensus_8653#4 ATCGTGTTCGAAGCTCGACCTCAAGTTTTAGGGTCTTGCCGGTG-AGCGTTTTCACGAAA 254
consensus_8653#0 CAC-CGTACGCGGATCATACATTGCTGCCCGGAGGTGGC--AAGAATCAGGTGATCTGTG 649
consensus_8653#1 CTGCCGGTGGCAAGCCCGCCAAGGCTGGCGAGAAGAAGAAGCCGGTGCGCCGTATCAATG 583
* * * * * *
consensus_8653#2 ACATCGAGTCCTTGATGGTGAAGCCGATGCAGAACACGCGCAGATGA-AGCCATCGGTGG 463
consensus_8653#3 ACGCCCAGCACTCGCAGATCAAGAACATTC-----GCGCGAAGATGACGGCCATCATCAA 415
consensus_8653#4 ATCTGCATGTTTCCAACGTGTCTTTTCGCTGGTACACTTTGACAGGAAAAAAGCCAGTTG 314
consensus_8653#0 ACTTCAACACTCCACCAACGGCCGGCAACGTGTGTGCCTCGATGTGAAGAACCTTGGCCC 709
consensus_8653#1 CCAAGGGCAAGAAGACGACCAAGTCCCCGCGCCCGAAGCTGACCAAGGAGCAGGTGA-AG 642
*
consensus_8653#2 TCTTGACGTCGACCGAGCACTCGATCAGGGTTTGCCATTTCTTGACCATGGATCGCAGCT 523
consensus_8653#3 GCGTGAAATCACC--AGCAC---------------------------------------- 433
consensus_8653#4 GCCAACAGTTCTCGAGGAATTCCGCAGCCT------------------------------ 344
consensus_8653#0 GTGTTCGGCAGCGGCAGGATACAGCTACAACCGATCGGCGCCATGCATTTTCATTAAGCT 769
consensus_8653#1 GCCAAGATCCAGAAGGGCATCCAGAAGGCTCGTGCCACCGCTATGCTGCGTGCC-AAGCG 701
* *
consensus_8653#2 TGTCGGTCGTCAACGCCATACCGTGGAAGTAGGTAAGGACATCACGGACGT--------- 574
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 CAACAGAATTTATGGCTGGCAGCCCGAGTTCTACGAAGACGTCGACGATCTGCCCACCGA 829
consensus_8653#1 TGCCTCGACCAAGCTGGTCAAGGGTCCGTATGGAACCTGCGTCCGCAAGATCCGCACGTC 761
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 CATGCCCGACGATCTGGCGTCTCACATTCGTTCGCTGCCCGCTCCGGACCGGCGCCAGGT 889
consensus_8653#1 CGTGCACTTCAAGCGGCCGAAGACCCTGAAGCTTCCGCGTCGTCCCAAGTACCCGAGGAA 821
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 GTGGGTGACGTGCAAGGAACTTACCACCACTGACGAAAACCAGCTCGGACCGATCGAATA 949
consensus_8653#1 GTCGGTCGCCAAGCGCAGCGCATGGATGCGTACAATATAATTAAGTACCCGCTGACGACC 881
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 CCTGCCGAGCCAAGGTTTCCAGCGTACTACTACCCATACATGAACATCGACGGCTATCTG 1009
consensus_8653#1 GAAGCGGCGATGAAGAAGATCGAGGACAACAACACGCTCGTCTTCCTGATTCACCTGCGC 941
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 AGCCCACTCGTCGCCGTACATCTTGCCCGACCGAAGCCGAAAACGACCATCAGCATCGAG 1069
consensus_8653#1 GCCAACAAGAACCACGTGAAGGCCGCCGTGAGGAAGCTGTACGACGTGAAGGTGCTGAAG 1001
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 TGCCGTGCCTGGGCGAAAAACATTATCTACCGCGGAGGTAGTCGCGATCGGGCCGGGTCG 1129
consensus_8653#1 AT---------------------------------------------------------- 1003
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 GTACAGCTATTCCTGCGTATTGATTAGATAGCGCTGCGGCTGATTCCCACCGACCAATGT 1189
consensus_8653#1 ------------------------------------------------------------
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 GACAATGTCGAATTGTTGTTTCATTTTTTTAACGTGTTACGTTGATCCGTTTTGCTGAAC 1249
consensus_8653#1 ------------------------------------------------------------
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 GCAGCGACACAAGGGGACGAGAATTCATTAGAAACAAATTACATCGCAGCCAGACGCCCG 1309
consensus_8653#1 ------------------------------------------------------------
consensus_8653#2 ------------------------------------------------------------
consensus_8653#3 ------------------------------------------------------------
consensus_8653#4 ------------------------------------------------------------
consensus_8653#0 CCCGATCATCCTTCCACAACGCACGTGTGCTATGAAGAGTTTACTTAAACGTTTTAGTGA 1369
consensus_8653#1 ------------------------------------------------------------
consensus_8653#2 ----------------------------------------------
consensus_8653#3 ----------------------------------------------
consensus_8653#4 ----------------------------------------------
consensus_8653#0 AGTGAGAAAAATCAATAAATGTATGTTTGTTTGGAAAAAAAAAAAA 1415
consensus_8653#1 ----------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||