cluster # 867

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Anopheles gambiae
cluster # 867 cluster # 867 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_867#0 length = 527 sequences # 1

consensus_867#1 length = 482 sequences # 1

consensusID : consensus_867#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 527
fasta sequence

                              [CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCAGCTGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGACGGCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGCCCATGGTGCAGCGGGCGATCGCGTTCGTGATTGATTATGTGAATCGCGATCTGGAGGAGCATCGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGATCACGCTCGCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTTGATCTTTGACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGAGCGCGATGCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAGCGAGTGTATGCATATAGACTACCTGCGCAAGTACTGCTACTGCCAGCGGACGAA]

[+] EMBL BM645819             [CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCAGCTGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGACGGCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGCCCATGGTGCAGCGGGCGATCGCGTTCGTGATTGATTATGTGAATCGCGATCTGGAGGAGCATCGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGATCACGCTCGCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTTGATCTTTGACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGAGCGCGATGCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAGCGAGTGTATGCATATAGACTACCTGCGCAAGTACTGCTACTGCCAGCGGACGAA]




>consensus_867#0
CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCAGC
TGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGACG
GCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGCCC
ATGGTGCAGCGGGCGATCGCGTTCGTGATTGATTATGTGAATCGCGATCTGGAGGAGCAT
CGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGATCACGCTC
GCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTTGATCTTT
GACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGAGCGCGAT
GCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAGCGAGTGT
ATGCATATAGACTACCTGCGCAAGTACTGCTACTGCCAGCGGACGAA

consensusID : consensus_867#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence

                              [AATCGCCACGAGGTGTAATTCAGCGATCACGGGCTACGCGTTCGGCCCCGTTCGTATAGCTGCTGACGGGGTGGCTCGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGCCAGAATAGGTTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAAGATCAATCGCGAATCGGCTGACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGAGGCTTGTCCCGGGGCGGATCTGGACAATCTTGGCCGGAACCNGGTCACGCTGGCCCAACGTGCCAGGAGCATCTTCGCGGGAGGTACCGTGGAATCGGTCCTGCGAGTGAGACGGCCATCGAATCGCACTGGGTGCACCTGNGGCCCAACTTCCATGACCGCATCGATAAGCGTTCGNCCATAGTGCCAACAGGGCGATCGACGTTCGCTGCATTTGATTATGTGAATCGGCGATTCTGGAGGAGCATCGTAACA]

[+] EMBL BX469528             [AATCGCCACGAGGTGTAATTCAGCGATCACGGGCTACGCGTTCGGCCCCGTTCGTATAGCTGCTGACGGGGTGGCTCGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGCCAGAATAGGTTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAAGATCAATCGCGAATCGGCTGACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGAGGCTTGTCCCGGGGCGGATCTGGACAATCTTGGCCGGAACCNGGTCACGCTGGCCCAACGTGCCAGGAGCATCTTCGCGGGAGGTACCGTGGAATCGGTCCTGCGAGTGAGACGGCCATCGAATCGCACTGGGTGCACCTGNGGCCCAACTTCCATGACCGCATCGATAAGCGTTCGNCCATAGTGCCAACAGGGCGATCGACGTTCGCTGCATTTGATTATGTGAATCGGCGATTCTGGAGGAGCATCGTAACA]




>consensus_867#1
AATCGCCACGAGGTGTAATTCAGCGATCACGGGCTACGCGTTCGGCCCCGTTCGTATAGC
TGCTGACGGGGTGGCTCGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGCCAGAATAGG
TTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAAGATCAATCGCGAATCGGCT
GACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGAGGCTTGTCCCGGG
GCGGATCTGGACAATCTTGGCCGGAACCNGGTCACGCTGGCCCAACGTGCCAGGAGCATC
TTCGCGGGAGGTACCGTGGAATCGGTCCTGCGAGTGAGACGGCCATCGAATCGCACTGGG
TGCACCTGNGGCCCAACTTCCATGACCGCATCGATAAGCGTTCGNCCATAGTGCCAACAG
GGCGATCGACGTTCGCTGCATTTGATTATGTGAATCGGCGATTCTGGAGGAGCATCGTAA
CA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_867#0      --CCGCTGAAGCACGTGCTGGAGCTGTCCGGGCGGATCGACAATCTGCCCGGACCGCTCA 58
consensus_867#1      AATCGCCACGAGGTGTAATTCAGCGATCACGG--GCTACGCGTTCGGCCCCGTTCGTATA 58
                        ***        **  *  ***  **  **  * *   *  ** **** *  **   *

consensus_867#0      GCTGCCCCAACTGCCAGAGCATCTTCGCGGAGGTACCGTGGAATCGGTCCTGCGAGGAGA 118
consensus_867#1      GCTGC------TGACGGGGTGGCT-CGAGGAACGGCTGCCGTTTAACTTCATCTGGCTGC 111
                     *****      ** * * *   ** ** ***    * *  *  *   * *  *  *  * 

consensus_867#0      CGGCCATCGAATCGCACTGGTGCACCTGCGCCAACTTCCAGCCGATCGATAAGCGTTCGC 178
consensus_867#1      CAGA-ATAGGTTCCGCGAGGAGCATCACCGAAATATGCAAAGCGCTCCAAA---GATCAA 167
                     * *  ** *  **     ** *** *  **  *  * * *  ** ** * *   * **  

consensus_867#0      CCATGGTGCAGCGGGCGATCGC-GTTCGTGATTG---ATTATG-TGAATCGCGATCTGGA 233
consensus_867#1      TCGCGAATCGGCTGACGAAANCCGTACGATATTGCACGCCACACTGAAGCACGTGCTGGA 227
                      *  *   * ** * ***   * ** **  ****      *   **** * **  *****

consensus_867#0      GGAGCATCGTAACAGCACGACGGCGAACTATGCGTGCGCTAAGCTAGCGGTTGGGTCGAT 293
consensus_867#1      GG---CTTGTCCCGGGGCGGATCTGGACAAT-CTTGGCCGGAACCN--GGTCACGCTGGC 281
                     **    * **  * *  **     * ** ** * **  *  * *    ***   *  *  

consensus_867#0      CACGCTCGCTAAGATGGCGCACGAACCGAAGGGCCGGCTGCCGTACCGGGACTATTTGTT 353
consensus_867#1      CCAACGTGCCAGGA--GCATCTTCGCGGGAGGT---ACCGTGGAATCGGTCCTGCGAGTG 336
                     *   *  ** * **  **       * * ***     * *  * * ***  **    ** 

consensus_867#0      GATCTTTGACGGTAAGCCGGGCGGTGGGAAGTTTGAGTCGACGGTGCGACACTATCAGGA 413
consensus_867#1      AGAC--GGCCATCGAATCGCACTGGGTGCACCTGNGGCCCAACTTCCATGACC----GCA 390
                        *   * *    *  **  * * * * *  *   * * *   * *   **     * *

consensus_867#0      GCGCGATGCGTTCGAGATCACGGGGTCGATCAGTCGGCTGAACGAGTACGCCAGCCAGAG 473
consensus_867#1      TCGATAAGCGTTCGN--CCATAGTGCCAACAGGGCGATCGA-------CGTTCGCTGCAT 441
                      **  * *******    **  * * * *   * **   **       **   **   * 

consensus_867#0      CGAGTGTATGCATATAGACTAC-CTGCGCAAGTACTGCTACTGCCAGCGGACGAA 527
consensus_867#1      TTGAT-TATGTGAATCGGCGATTCTGGAGGAGCATCGTAACA------------- 482
                         * ****   ** * * *  ***    ** *  *  **