cluster # 8672

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Anopheles gambiae
cluster # 8672 cluster # 8672 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8672#0 length = 693 sequences # 10

consensus_8672#1 length = 491 sequences # 1

consensusID : consensus_8672#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 693
fasta sequence

                              [AGTCCCCGAGGT-T-ATTCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT-CCTGG-CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT-GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG-CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC-TCTGGGCTAA-GCC-AACGGAGCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGACAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGTTACAACATTTAAAATAACAATAAAAATGTTTCGA]

[+] EMBL AL695634             [  TCCCCGAGGT T ATTCGTTCGCATAGTTTGGTTTAGTCGCAAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGGCCGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCG GCCAATCCG CGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCACATCTGGGCTAACGCC AACGGAGCACAG                                                                                                                                                    ]
[+] EMBL AL929824             [agatCCCGAGGTATCGTTCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGNTG CGCTCGGTACGG CGAATCGCAGG CGTCATCCTGGGCGCAGGAGCAGAACCACGA CCGAGCGGTGCGTACAACTATCGGTACGAGACGAGC ACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGC                                                                                                                                                                        ]
[+] EMBL BX626051             [                      CGCATAGTTTGGTTTAGTCGCAAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGCTAA GCC AACGGAGCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGACAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGTTACAACATTTAAAATAACAATAAAAATGTTTCGA]
[+] EMBL BX626052             [                           AGTTTGGTTTAGTCGCANGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGCTAA GCC AACGGAGCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGACAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGTTACAACATTTAAAATAACAATAAAAATGTTTCGA]
[+] EMBL BX623567             [                                 GTTTAGTCGCGAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGCTAA GCC AACGGAGCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGACAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTAT                                          ]
[+] EMBL AL692574             [                          cccccgaggTTAGTCGCGAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCG CAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGG TACGGGCCAC TCTGGGCTAA GCCAAACGGAGCACAG CAACa                                                                                                                                              ]
[+] EMBL BX628244             [                                     AGTCGCGAGTGTGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTAT CCTGG CCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGCTAA GCC AACGGAGCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGACAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGTTACAACATTTAAAATAACAATAAAAATGTTTCGA]
[+] EMBL BX619959             [                                                                                   TTAGNCAAGTGCTTATACCTGGTCCGCGGTCACCGTGTGTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTA                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX624115             [                                                                                                                         GTAGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAATCGCAGGCCGTCATCCT GGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATCGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCGACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACCATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGCTAA GCC AACGGAGCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGACAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGTTACAACATTTAAAATAACAATAAAAATGTTTCGA]
[+] EMBL BX626042             [                                                                                                                                                                                                                                                                         ATCGCGGCGCAGCAGACCAGCTACGATGGNGCTANTGCGG CGGGCGAGTACTCGNACACCGGGCCGGACGGTGTGCTGTACCGGGTGGNGTACAATGCCNACACGTACGGGTTCCANCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCANTACCGGACCATGTGCTGAAGTCNCTCNAGGAGATCCGCGCCAATCCGCCGCNTGATCAGGAGTTCNATCTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCAC TCTGGGCTAA GCC AACGGANCACAGCCAACCAACACNAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAG                                                                                                 ]




>consensus_8672#0
AGTCCCCGAGGTTATTCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTGTTCTATTCTTGT
CTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTATCCTGGCCGCGGTCACCGTGTGTA
GTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAAT
CGCAGGCCGTCATCCTGGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTATC
GGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCGG
CGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCCG
ACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGACC
ATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAATC
TGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCACTCTGGGCTAAGCCAACGGAG
CACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGAC
AGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGTT
ACAACATTTAAAATAACAATAAAAATGTTTCGA

consensusID : consensus_8672#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 491
fasta sequence

                              [TCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTAGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTATCCTGGCCGCGGTCACCGTGTGTATTGTGCTGGCCGCTCCCCAAAACCNTCTCGGTGGACCGCTGCCGCTCGGTACGGCCAATTCGCAGGCCGTCTTCCTGGCCCAGGACCAAAACCACAACCCAACCGGTGCTTACAACTATCGGTACAAAACAACCAACGGCTTCGCGGCCCACCAAACCACCTACAATGGCCCTATTGCGGCGGGCAATTACTCTTACACCGGGCCGGACGGTTTGCTGTACCGGGTGGCTTACAATGCCAACACTTACGGTTCCCACCCGCAGGGTGCCNNTCTGCCGGTCAAGCGGCNNTTACCGAACCTTGTGCTGAATTCCCTCAAGGAGATCGCCCCATTCCGCCGCTTGATCAGGATTCCATTCTGGCCGCCCTCAATGCCCAAATCCCN]

[+] EMBL BX624246             [TCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTAGTTCTATTCTTGTCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTATCCTGGCCGCGGTCACCGTGTGTATTGTGCTGGCCGCTCCCCAAAACCNTCTCGGTGGACCGCTGCCGCTCGGTACGGCCAATTCGCAGGCCGTCTTCCTGGCCCAGGACCAAAACCACAACCCAACCGGTGCTTACAACTATCGGTACAAAACAACCAACGGCTTCGCGGCCCACCAAACCACCTACAATGGCCCTATTGCGGCGGGCAATTACTCTTACACCGGGCCGGACGGTTTGCTGTACCGGGTGGCTTACAATGCCAACACTTACGGTTCCCACCCGCAGGGTGCCNNTCTGCCGGTCAAGCGGCNNTTACCGAACCTTGTGCTGAATTCCCTCAAGGAGATCGCCCCATTCCGCCGCTTGATCAGGATTCCATTCTGGCCGCCCTCAATGCCCAAATCCCN]




>consensus_8672#1
TCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTAGTTCTATTCTTGTCTACGTATTTCGCA
AACATGTTTAGCAAAGTGCTTATCCTGGCCGCGGTCACCGTGTGTATTGTGCTGGCCGCT
CCCCAAAACCNTCTCGGTGGACCGCTGCCGCTCGGTACGGCCAATTCGCAGGCCGTCTTC
CTGGCCCAGGACCAAAACCACAACCCAACCGGTGCTTACAACTATCGGTACAAAACAACC
AACGGCTTCGCGGCCCACCAAACCACCTACAATGGCCCTATTGCGGCGGGCAATTACTCT
TACACCGGGCCGGACGGTTTGCTGTACCGGGTGGCTTACAATGCCAACACTTACGGTTCC
CACCCGCAGGGTGCCNNTCTGCCGGTCAAGCGGCNNTTACCGAACCTTGTGCTGAATTCC
CTCAAGGAGATCGCCCCATTCCGCCGCTTGATCAGGATTCCATTCTGGCCGCCCTCAATG
CCCAAATCCCN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8672#0      AGTCCCCGAGGTTATTCGTTCGCATAGTTTGGTTTAGTCGCGAGTGT-GTTCTATTCTTG 59
consensus_8672#1      ---------------TCGTTCGCATAGTTTGGTTTAGTCGCGAGTGTAGTTCTATTCTTG 45
                                     ******************************** ************

consensus_8672#0      TCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTATCCTGGCCGCGGTCACCGTGTGT 119
consensus_8672#1      TCTACGTATTTCGCAAACATGTTTAGCAAAGTGCTTATCCTGGCCGCGGTCACCGTGTGT 105
                      ************************************************************

consensus_8672#0      AGTGTGCTGGCCGCTCCCCAGAAGCGTCTCGGTGGACCGCTGCCGCTCGGTACGGCCGAA 179
consensus_8672#1      ATTGTGCTGGCCGCTCCCCAAAACCNTCTCGGTGGACCGCTGCCGCTCGGTACGGCCAAT 165
                      * ****************** ** * ******************************* * 

consensus_8672#0      TCGCAGGCCGTCATCCTGGCGCAGGAGCAGAACCACGACCCGAGCGGTGCGTACAACTAT 239
consensus_8672#1      TCGCAGGCCGTCTTCCTGGCCCAGGACCAAAACCACAACCCAACCGGTGCTTACAACTAT 225
                      ************ ******* ***** ** ****** **** * ****** *********

consensus_8672#0      CGGTACGAGACGAGCAACGGCATCGCGGCGCAGCAGACCAGCTACGATGGCGCTAATGCG 299
consensus_8672#1      CGGTACAAAACAACCAACGGCTTCGCGGCCCACCAAACCACCTACAATGGCCCTATTGCG 285
                      ****** * ** * ******* ******* ** ** **** **** ***** *** ****

consensus_8672#0      GCGGGCGAGTACTCGTACACCGGGCCGGACGGTGTGCTGTACCGGGTGGCGTACAATGCC 359
consensus_8672#1      GCGGGCAATTACTCTTACACCGGGCCGGACGGTTTGCTGTACCGGGTGGCTTACAATGCC 345
                      ****** * ***** ****************** **************** *********

consensus_8672#0      GACACGTACGGGTTCCAGCCGCAGGGTGCCCATCTGCCGGTCGAGCCGCCAGTACCGGAC 419
consensus_8672#1      AACACTTACGGTTCCCACCCGCAGGGTGCCNNTCTGCCGGTCAAGCGGCNNTTACCGAAC 405
                       **** ***** * *** ************  ********** *** **   ***** **

consensus_8672#0      CATGTGCTGAAGTCGCTCGAGGAGATCCGCGCCAATCCGCCGCGTGATCAGGAGTTCAAT 479
consensus_8672#1      CTTGTGCTGAATTCCCTCAAGGAGATC-GCCCCATTCCGCCGCTTGATCAGGATTCCATT 464
                      * ********* ** *** ******** ** *** ******** ********* * ** *

consensus_8672#0      CTGGCCGCGCTCGATGCACAGATCGCACGGCTACGGGCCACTCTGGGCTAAGCCAACGGA 539
consensus_8672#1      CTGGCCGCCCTCAATGCCCAAATCCCN--------------------------------- 491
                      ******** *** **** ** *** *                                  

consensus_8672#0      GCACAGCCAACCAACACAAATGACAAGCACATGGTTGTGATCGAGATGGTACCACAGGGA 599
consensus_8672#1      ------------------------------------------------------------
                                                                                  

consensus_8672#0      CAGGGCAGGAAGGGTTGATTGGTTTGTTGAAATGGTGTCCGCTGATGTTTATGTTACAGT 659
consensus_8672#1      ------------------------------------------------------------
                                                                                  

consensus_8672#0      TACAACATTTAAAATAACAATAAAAATGTTTCGA 693
consensus_8672#1      ----------------------------------