cluster # 8683

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Anopheles gambiae
cluster # 8683 cluster # 8683 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8683#0 length = 1755 sequences # 7

consensus_8683#1 length = 559 sequences # 2
consensus_8683#2 length = 526 sequences # 2

consensusID : consensus_8683#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1755
fasta sequence

                              [CCGTTTCCCTTCAAACACAACAAGCGGAAAATCTTATCATACAATGCAACCGTTTGCAAATTTTAAACGTTCATAGTAATGCTGATATCCTTACATACAAAAAGGACACAAAACATG---ATAATCCCTAA-GCGCTCTATTGTAGGGA-GACAGGCACGATACATTTCAACGATGGTTCCCAAGCAAATCCGTAGTCGCTGTCACTGTCGTCACACTGCACATCCGCAGTCTCGCGCGCTGTACGTACGTACGGGGTCCACACCGTGTTTGGTC---CTATCTTATCTATCTAATCACAGCGCAAGATAGATAGGTAGGTAAAAAAAAGCGCGGCCAAACAAATAACAAACATCTTCGTGATTCATCAAATTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACCACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTTGCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGGG---CTCCTCTCTGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGCCGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAGGACAGT-GTTATTTATCGTAACCTAGCATTATATTAGCAGCAGCACTACGGGAGAACAGTGCTATGGGACGGAATTGAGGGACGCGCAAGAAGCAGCATTATTACATTCATGCCAGTGGTGAGGCAAGCTATTTGCGGGTTTGTTTGGCAACGGAACCGTCACAGTATCAGTCTGTATCAGTTGGTAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTAGCCTGATAAGCAGAGCGT-CG-T-CCGGTGTAGCTGTTGTTTAA----TCCCGCCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATTTTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCATCCGATACNAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGNTAAATATGGACTAGAGGGAGCAATGAATGTCTCAAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTAGAAAGTACCAGGTGATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACACCTACACATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACAGAAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACCAACAAACAAAAATCTGCCCTTTTTCGAACAGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTTGCACACTTGAAAGATAGCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAAACAAAACAATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCTCGCGTGAAACCAAGCGGAGTATGTGTGTGTGTTTGTTTGTGTGCACCACTTTATCATTATTTTTAATGTATTCTCTTTAGACAAATGCAAGATAGCAGAGAGCAGCAAACACACCCGCGTAAATGGTTAAGGATAATAAA]

[+] EMBL BM631907             [CCGTTTCCCTTCAAACACAACAAGCGGAAAATCTTATCATACAATGCAACCGTTTGCAAATTTTAAACGTTCATAGTAATGCTGATATCCTTACATACAAAAAGGACACAAAACATGATAATAATCCCTAA GCGCTCTATTGTAGGGA GACAGGCACGATACATTTCAACGATGGTTCCCAAGCAAATCCGTAGTCGCTGTCACTGTCGTCACACTGCACATCCGCAGTCTCGCGCGCTGTACGTACGTACGGGGTCCACACCGTGTTTGGTC   CTATCTTATCTATCTAATCACAGCGCAAGATAGATAGGTAGGTAAAAAAAAGCGCGGCCAAACAAATAACAAACATCTTCGTGATTCATCAAATTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACCACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTTGCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGCCGTGACAAAGCGGAG   CTCCTCTCTGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGCCGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAAGGAGGACAGTGGTTATTTATCGTAACCTAGCATTATATTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX628395             [                                                        gcAATTTTAAACGTTCATAGTAATGCTGATATCCTTACATACAAAAAGGACACAAAACATG   ATAATCCCTAAGGCGCTCTATTGTAGAGAGGGCAGGCACGATACATCTCAGCGATGGTTCCCAGGCAAATCCGTAGTCGCTGTCACTGTCGTCACACTGCACATCCGCAGTCTCGCGCGCTGTACGTACGTACGGGGTCCACACCGTGTTTGGTCGTGCTATCTTATCTATCTAATCACAGCGCAAGATAGATAGGTAGGTAAAAAAAAGCGCGGCCAAACAAATAACAAACATCTTCGTGATTCATCAAATTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACCACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTTGCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGGG   CTCCTCTCTGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGCCGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM585979             [                                                                                                                                                                                                                                                                                                                                     ccgAGCGCGGCCAAACAAATAACAAACATCTTCGTGATTCATCAAATTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACCACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTTGCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGGG   CTCCTCTCTGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGCCGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAGGACAGT GTTATTTATCGTAACCTAGCATTATATTAGCAGCAGCACTACGGGAGAACAGTGCTATGGGACGGAATTGAGGGACGCGCAAGAAGCAGCATTATTACATTCATGCCAGTGGTGAGGCAAGCTATTTGCGGGTTTGTTTGGCAACGGAACCGTCACAGTATCAGTCTGTATCAGTTGGTAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTAGCCTGATAAGCAGAGCGT CG T CCGGTGTAGCTGTTGTTTAA    TCCCGCCAACATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX622351             [                                                                                                                                                                                                                                                                                                                                                                                   TTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACCACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTTGCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGGG   CTCCTCTCTGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGCCGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAGGACAGT GTTATTTATCGTAACCTAGCATTATATTAGCAGCAGCACTACGGGAGAACAGTGCTATGGGACGGAATTGAGGGACGCGCAAGAAGCAGCATTATTACATTCATGCCAGTGGTGAGGCAAGCTATTTGCGGGTTTGTTTGGCAACGGAACCGTCACAGTATCAGTCTGTATCAGTTGGTAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTAGCCTGATAAGCAGAGCGT CG T CCGGTGTAGCTGTTGTTTAA    TCCCGCCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATTTTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCATCCGATACNAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGNTAAATATGGACTAGAGGGAGTAATGAATGTCTCAAGCATACTATTTTTTCCAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX624631             [                                                                                                                                                                                                                                                                                                                                                                                                AGTACCAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACCACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGGGACAACCACGGCTTGCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGAGCTCCTCCTCTCTGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGCCGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAGGACAGT GTTATTTATCGTAACCTAGCATTATATTAGCAGCAGCACTACGGGAGAACAGTGCTATGGGACGGAATTGAGGGACGCGCAAGAAGCAGCATTGTTACATTCATGCCAGTGGCGCGGCAAGCTATTTGCGGGTTTGTTTGGCAACGGAACCGTCACAGTATCAGTCTGTATCAGTTGGTAAACATACGGAATCATCAATTTTCAAGACACCACCTTGTTTTATCGGCTGTTTATCATACACACATCTACCCTGATAAGCAGAGCGTCCGATGTAGCCTTAGCTGTTGTTTAACGGGGGTAGCCAACATTTGAGTAATGTAATCCTGTCCcnttt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM655778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccgATTCATGCCAGTGGCGCGGCAAGCTATTTGCGGGTTTGTTCGGCAACGGAACCGTCACAGTATCAGTCTGTATCAGTTGGTAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTACCCTGATAAGCAGAG    CG T CCGATGTAGCTGTTGTTTAA    TCCCGCCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATTTTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTTGTGTGAGCAAGCATCCGATACAAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGTTAAATATGGACTAGAGGGAGCAATGAATGTCTCAAACATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTAGAAAGTACCAGGTGATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACACCTACACATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACAGAAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAATGTTAAT                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM612445             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgAATGAATGTCTCAAGCATACAATTTTTTCCAATTGAAATGAGCTGCTGTGTATTAGAAAGTACCGGGAGATCGAGAGGGCGAATATTTAATAAAAGTTATAAAT  ACACACACACCTACACATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAA   AGAAACGTTTCCGTAGGTGAACAGCGCAATACATACAGAAATGTCAATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACCAACAAACAAAAATCTGCCCTTTTTCGAACAGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTTGCACACTTGAAAGATAGCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAAACAAAACAATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCTCGCGTGAAACCAAGCGGAGTATGTGTGTGTGTTTGTTTGTGTGCACCACTTTATCATTATTTTTAATGTATTCTCTTTAGACAAATGCAAGATAGCAGAGAGCAGCAAACACACCCGCGTAAATGGTTAAGGATAATAAA]




>consensus_8683#0
CCGTTTCCCTTCAAACACAACAAGCGGAAAATCTTATCATACAATGCAACCGTTTGCAAA
TTTTAAACGTTCATAGTAATGCTGATATCCTTACATACAAAAAGGACACAAAACATGATA
ATCCCTAAGCGCTCTATTGTAGGGAGACAGGCACGATACATTTCAACGATGGTTCCCAAG
CAAATCCGTAGTCGCTGTCACTGTCGTCACACTGCACATCCGCAGTCTCGCGCGCTGTAC
GTACGTACGGGGTCCACACCGTGTTTGGTCCTATCTTATCTATCTAATCACAGCGCAAGA
TAGATAGGTAGGTAAAAAAAAGCGCGGCCAAACAAATAACAAACATCTTCGTGATTCATC
AAATTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACC
ACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTT
GCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGGGCTCCTCTC
TGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGC
CGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAG
GACAGTGTTATTTATCGTAACCTAGCATTATATTAGCAGCAGCACTACGGGAGAACAGTG
CTATGGGACGGAATTGAGGGACGCGCAAGAAGCAGCATTATTACATTCATGCCAGTGGTG
AGGCAAGCTATTTGCGGGTTTGTTTGGCAACGGAACCGTCACAGTATCAGTCTGTATCAG
TTGGTAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTAT
CATACACACATCTAGCCTGATAAGCAGAGCGTCGTCCGGTGTAGCTGTTGTTTAATCCCG
CCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCAC
AATTTTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCAT
CCGATACNAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGNTAAATATGGACTAGAG
GGAGCAATGAATGTCTCAAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTA
GAAAGTACCAGGTGATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACA
CCTACACATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACAG
AAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAATG
TTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACCAACAAACAAA
AATCTGCCCTTTTTCGAACAGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTTG
CACACTTGAAAGATAGCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAA
ACAAAACAATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCTCGCGT
GAAACCAAGCGGAGTATGTGTGTGTGTTTGTTTGTGTGCACCACTTTATCATTATTTTTA
ATGTATTCTCTTTAGACAAATGCAAGATAGCAGAGAGCAGCAAACACACCCGCGTAAATG
GTTAAGGATAATAAA

consensusID : consensus_8683#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 559
fasta sequence

                              [CCGCCCACGCGTCCGGGCGAATATTTAATAAAAGTTATAAATACACACACACACCTACACATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACAGAAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACAAACAAACAAAAATCTGCCCTTTTTCGAACCGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTTGCACACTTGAAAGATAGCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAAACAAAACAATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCGCTCGCGCGAAACCAAGCGGTGTATGTGTGTGTGTGATTGTGTGCACCACTTTATCATTATTTTTAATGTATTCTCTTTAGACAAATGCAAGATAGCAGAGAGCAACAAAACACACCCGCGTAAATGGTTAAGGATAATAAAATATGGAGAG]

[+] EMBL BM622249             [CCGCCCACGCGTCCGGGCGAATATTTAATAAAAGTTATAAATACACACACACACCTACACATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACAGAAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACAAACAAACAAAAATCTGCCCTTTTTCGAACCGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTTGCACACTTGAAAGATAGCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAAACAAAACAATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCGCTCGCGCGAAACCAAGCGGTGTATGTGTGTGTGTGATTGTGTGCACCACTTTATCATTATTTTTAATGTATTCTCTTTAGACAAATGCAAGATAGCAGAGAGCAACAAAACACACCCGCGTAAATGGTTAAGGATA               ]
[+] EMBL BM605913             [                                                                                                                                                                                                                                                                                                                          ccGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAAACAAAACAATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCGCTCGCGCGAAACCAAGCGATGTA  TGTGTGTGTGATTGTGTGCACCACTTTATCATTATTTTTAATGTATTCTCTTTAGACAAATGCAAGATAGCAGAGAGCAACAAAAAACACCCGCGTAAATGGTTAAGGATAATAAAATATGGAGAG]




>consensus_8683#1
CCGCCCACGCGTCCGGGCGAATATTTAATAAAAGTTATAAATACACACACACACCTACAC
ATACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACAGAAACGTT
TCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAATGTTAATGC
AAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACAAACAAACAAAAATCTGC
CCTTTTTCGAACCGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTTGCACACTT
GAAAGATAGCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGGGCCAAAACAAAAC
AATAGAAAAGAAGAGAAATGTTTGCAGCAGCAAAGCGCATACCAAGCGCTCGCGCGAAAC
CAAGCGGTGTATGTGTGTGTGTGATTGTGTGCACCACTTTATCATTATTTTTAATGTATT
CTCTTTAGACAAATGCAAGATAGCAGAGAGCAACAAAACACACCCGCGTAAATGGTTAAG
GATAATAAAATATGGAGAG

consensusID : consensus_8683#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 526
fasta sequence

                              [AGGCAGAATCNGCCACGAGGGTCACAGTATCAGTCTGTATCAGTTGGCAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTAGCCTGATAAGCAGAGCGTCGTCCGGTGTA-GCTGTTGTTTAATCCCGCCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATT-TTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCATCCGATACAAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGTTAAATATGGACTAGAGGGAGTAATGAATGTCTCAAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTAGAAAGTACCGGGAGATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACCTACACATAGAAATGTCAATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTT]

[+] EMBL BX467448             [AGGCAGAATCNGCCACGAGGGTCACAGTATCAGTCTGTATCAGTTGGCAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTAGCCTGATAAGCAGAGCGTCGTCCGGTGTA GCTGTTGTTTAATCCCGCCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATT TTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCATCCGATACAAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGTTAAATATGGACTAGAGGGAGTAATGAATGTCTCAAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTAGAAAGTACCGGGAGATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACCTACACATAGAAATGTCAATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTT]
[+] EMBL BX620711             [                                                                                           TCGGCTGTTTATCATACACNCATCTAGCCTGATAAGCAGAGCGTCGTCCGGTGTACGCTGTTGTTTAATCCCGCCAACNTTTGAGTAGTGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATTGTTTACGCTAATCACA                                                                                                                                                                                                                                                                                            ]




>consensus_8683#2
AGGCAGAATCNGCCACGAGGGTCACAGTATCAGTCTGTATCAGTTGGCAAACATACGGAA
TCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTATCATACACACATCTAGCC
TGATAAGCAGAGCGTCGTCCGGTGTAGCTGTTGTTTAATCCCGCCAACATTTGAGTAATG
TAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCACAATTTTTACGCTAATCA
CAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCATCCGATACAAACATGTTT
CTTTCGATATCGGCAACTTAAGTCGGTTAAATATGGACTAGAGGGAGTAATGAATGTCTC
AAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTAGAAAGTACCGGGAGATC
GAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACCTACACATAGAAATGTCA
ATGCAGCAGCAAAATGTTAATGCAAAAATACACCATTACTACTTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8683#0      CCGTTTCCCTTCAAACACAACAAGCGGAAAATCTTATCATACAATGCAACCGTTTGCAAA 60
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      TTTTAAACGTTCATAGTAATGCTGATATCCTTACATACAAAAAGGACACAAAACATGATA 120
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      ATCCCTAAGCGCTCTATTGTAGGGAGACAGGCACGATACATTTCAACGATGGTTCCCAAG 180
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      CAAATCCGTAGTCGCTGTCACTGTCGTCACACTGCACATCCGCAGTCTCGCGCGCTGTAC 240
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      GTACGTACGGGGTCCACACCGTGTTTGGTCCTATCTTATCTATCTAATCACAGCGCAAGA 300
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      TAGATAGGTAGGTAAAAAAAAGCGCGGCCAAACAAATAACAAACATCTTCGTGATTCATC 360
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      AAATTACAAGCTCTGAAGTACAAAACCTCTACACGAAATGTGATAAGTAGCTTTTAGACC 420
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      ACGGGGGGACATAATAACAACCGAGTCGAGTTACCGGCAAAAGGGCGACAACCACGGCTT 480
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      GCACGGAAATTGCGCTCGTACGTACAGTGTCGTGAGACGTGACAAAGCGGGGCTCCTCTC 540
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      TGTCCAGTCGATCAGTTGGAAATTGGAAAGCAAAGATGAGATGAGATGTGGCTGAGCCGC 600
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      CGTTCCCAATTCCGACCCCACCCCGCACTACTAGCAGGCAAAATGATCTCGTTTAGGGAG 660
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      GACAGTGTTATTTATCGTAACCTAGCATTATATTAGCAGCAGCACTACGGGAGAACAGTG 720
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      CTATGGGACGGAATTGAGGGACGCGCAAGAAGCAGCATTATTACATTCATGCCAGTGGTG 780
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      AGGCAAGCTATTTGCGGGTTTGTTTGGCAACGGAACCGTCACAGTATCAGTCTGTATCAG 840
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      TTGGTAAACATACGGAATCATCAATTTTCAAGACAGCACCTTGTTTTATCGGCTGTTTAT 900
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      CATACACACATCTAGCCTGATAAGCAGAGCGTCGTCCGGTGTAGCTGTTGTTTAATCCCG 960
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      CCAACATTTGAGTAATGTAATCCTGTCCTTTTCTGCTAGTAGGAAGGATAGGGGGAGCAC 1020
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      AATTTTTACGCTAATCACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCAT 1080
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      CCGATACNAACATGTTTCTTTCGATATCGGCAACTTAAGTCGGNTAAATATGGACTAGAG 1140
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      GGAGCAATGAATGTCTCAAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTGTATTA 1200
consensus_8683#1      ------------------------------------------------------------
consensus_8683#2      ------------------------------------------------------------
                                                                                  

consensus_8683#0      GAAAGTACCAGGTGATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACA 1260
consensus_8683#1      -------CCGCCCACGCGTCCGGGCGAATATTTAATAAAAGTTATAAATACACACACACA 53
consensus_8683#2      ---------------------------------------AGGCAGAATCNGCCACGAGGG 21
                                                             **  * **     ***     

consensus_8683#0      CCTACACAT-ACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACA 1319
consensus_8683#1      CCTACACAT-ACTATATACAACACAACAACAGTAAAATTAAACTAATGATAAAAAAAACA 112
consensus_8683#2      TCACAGTATCAGTCTGTATCAGTTGGCAAACATACGGAATCATCAATTTTCAAGACAGCA 81
                       *     ** * * * **  *     ***   **       *  ***  * ** * * **

consensus_8683#0      GAAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAAT 1379
consensus_8683#1      GAAACGTTTCCGTAGGTGAACAGCGCAATACACACAGAAATGTCAATGCAGCAGCAAAAT 172
consensus_8683#2      CCT-TGTTTTATCGGCTGTTTATC---ATACACACATCTAGCCTGATA----AGCAGAGC 133
                           ****     * **   * *   *********   *     **     **** *  

consensus_8683#0      GTTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACCAACAAACAA 1439
consensus_8683#1      GTTAATGCAAAAATACACCATTACTACTTTTTGAACCCTTGCAAACAAACAAACAAACAA 232
consensus_8683#2      GTCG---------TCCGGTGTAGCTGTTGTTTAATCCC--GCCAACATTTGAGTAA-TGT 181
                      **           * *    *  **  * *** * ***  ** ****    *  **    

consensus_8683#0      AAATCTGCCCTTTTTCGAACAGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTT 1499
consensus_8683#1      AAATCTGCCCTTTTTCGAACCGTTCGATATCTTTGTTAAGGTTTAAACTCTCTAGCACTT 292
consensus_8683#2      AATCCTGTCCTTTTCTG--CTAGTAGGAAGGATAGGGGGAGCACAATTTTTACGCTAATC 239
                      **  *** ******  *  *   * *  *   * *     *   **  * *     * * 

consensus_8683#0      GCACACTTGAAAGATA-----GCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGG 1554
consensus_8683#1      GCACACTTGAAAGATA-----GCAATTCAGAAGAGAAGAAAGATATGTTAAAAAGAAAGG 347
consensus_8683#2      ACAAGATTAACGCATGCAACTGTATCTTTGGTGTGAGCAAGCATCCGATACAAACATGTT 299
                       **   ** *   **      * *  *  *  * **  **  **  * ** *** *    

consensus_8683#0      GC---CAAAACAAAACAATAGAAAAGAAGAGAAATG--TTTGCAGCAGCAAAGCGCATAC 1609
consensus_8683#1      GC---CAAAACAAAACAATAGAAAAGAAGAGAAATG--TTTGCAGCAGCAAAGCGCATAC 402
consensus_8683#2      TCTTTCGATATCGGCAACTTAAGTCGGTTAAATATGGACTAGAGGGAGTAATGAATGTCT 359
                       *   * * *      * *  *   *   * * ***   * *  * ** ** *    *  

consensus_8683#0      CAAGC--TCGCGTGAAACCAAGCGGAGTATGTGTGTGTGTTTGTTTGTGTGCACCACTTT 1667
consensus_8683#1      CAAGCGCTCGCGCGAAACCAAGCGGTGTATGTGTGTGTG--TGATTGTGTGCACCACTTT 460
consensus_8683#2      CAAGCATACTATTTTTTCCAACTGAAATGAGCTGCTGTG--TATTAGAAAGTACCGGGAG 417
                      *****   *        ****  *   *  *    ****  *  * *   * ***     

consensus_8683#0      ATCATTATTTTTAATGTATTCT-----CTTTAGACAAATGCAAGATAGCAGAGAGCAGCA 1722
consensus_8683#1      ATCATTATTTTTAATGTATTCT-----CTTTAGACAAATGCAAGATAGCAGAGAGCAACA 515
consensus_8683#2      ATCGAGAGGGCGAATATTTAATAAAAGTTATAAATACACACACACCTACACATAGAAATG 477
                      ***   *     *** * *  *      * ** * * *  **      ** * ** *   

consensus_8683#0      A-A-CACACCCGCGTAAATGGTTAAG-GATAATAAA-------------- 1755
consensus_8683#1      A-AACACACCCGCGTAAATGGTTAAG-GATAATAAAATATGGAGAG---- 559
consensus_8683#2      TCAATGCAGCAGCA-AAATGTTAATGCAAAAATACACCATTACTACTTTT 526
                        *   ** * **  ***** * * *  * **** *