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Anopheles gambiae
cluster # 8704 cluster # 8704       Sequences # 11       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8704#0 length = 2398 sequences # 7  
 consensus_8704#1 length = 801 sequences # 3  
consensus_8704#2 length = 592 sequences # 1  
consensusID : consensus_8704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2398
fasta sequence 
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGCGGGCGTCGGCGGTACCGGCGGCAGCACGATCATTCCCAAGAACGTAGTCCTGACCACGTCGAGCAGTGGCACGAATGGTCACAGCAGCGCGGCCACCACCACCACCACCACCACCACCACCGTGCCCGGTGTGCGCAAAATCATACGCATGCAGCAGCAGACGCAGCAGAACGGGCGGCAGATACTGGTGCCGGTGACGATTCAGGATCTGCGCACGATCAAGATCGTCAACTCGACCAACATGAAGGGCAGATCGTCGGCCAACATCAAGCTGGCGGCGGCCAACATGCTGCAGCAGTCGAAGCAAGGGCTAATACAGAAGAACGTGGTGCTGAGCAAGGATCAGCTGCTGCTGGACGATGGCGTGCTGTCCGATGCGGGCGGCCCCAGCTCCTCCTCCGACTCGGAAAGCTACGTGTTCGAGGACATTATGCAGCAGAGCAGCGCGGTGCTGGCGGAGGTCGAGCGGCAGCAGCAGAAGCATCACAGCAGCATCATCAGCGACTCGGACGTCGAGCCGGACGGGGACGATGGGGACGACGATGACGTCGACATGGAGGAGATTGGCAAGGGCCGCAACCAGAACGGCACGTACCAGAAGCTGATGCTGACGGCGGAGGAGAAGCGGCTGCTGGCGAAGGAAGGCATCTCGCTGCCGACCAGCTACCCGCTCACCAAACACGAGGAGCGCGAGCTGAAGCGCATCCGGCGGAAGATTCGGAACAAGATTTCCGCCCAAGATTCGCGCAAGCGCAAGAAGGAGTACGTCGACGGGCTGGAGGAAAGAGTGAAACAATGCACCGAGGAGAACCAGAATCTGGTGAAACGAATCAAGATTCTGCAGAGCCAAAATCACGACCTCGTTAGCCAGATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCACCTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGGCAACACGGCCACCCAGCAGAACATACAGGACTCGATCGAAATGTCCGAGCTGATGCAGGACCCGGCCAATGACAAGCTGCAGGTGGTGCAGCAGAGCCGCCGTGCACTGCTATTCGACACGAAGGAACAATCGCACGCTGCCGCCACCGCCGAGGAGGAGCTGAACTTTGACGAGATCATGTCATCGTTCAACGCCAACGCGCTGATCGCCAACGAGCACGACTACTTCAGCGAGCTGGACGGAGGACGGTCGGGCGGTGGTGAGCCGCCGTCGGCCAAGCGCTCCAAGCTGCTGCTACCGACGACCACGACGCTGATCGACTACGACGTCGATGACGACGTGTGGAACGGGGGCAGCAAGATACGCATCAAGCAGGAAGCGGCCGGATCCATGTCGCCGGACAGCAGCAGCAGCAACGGCAACAACGAGCTGTTCGAGCAGAAGGTGCGCGAGTTCCAGGCATCGCTGCAGAAAAGCATCCGCGACGCGGCCGAAGAACACACCACCGGCATGATGATGGCGGCCAAGTACGACCTCAACAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCAGCAGCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAATGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCGACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCGTTTTTAAGGCGCGTTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAAGCCTTTCGCAATTTGATTTATTAGTACGTACCTAGGTATGTTGAGGGGTATGTTCGTGTGTGTGTGTTACTAGTAAGAGATAGTAGAAGATAACGGCTAAGTGCATATTCATTTATACACACACACACACTCACACACAAATCAAGTATTTTACTCGTATCCAATTGGCATAAGATGCAGGAACGGTTCACTATTACGTGTTTTTCTTACTTTTTCACTACACAAGTAGATAAGACAGTTGCCGCCACCGCGTTGGTATGGGGAACAGTTACACTAGCACGCACCGCTTACTTTGT]

[+] EMBL BM583912             [CCGCCCACGCGTCCGCCCACGCGTCCGGGCGGGCGTCGGCGGTACCGGCGGCAGCACGATCATTCCCAAGAACGTAGTCCTGACCACGTCGAGCAGTGGCACGAATGGTCACAGCAGCGCGGCCACCACCACCACCACCACCACCACCACCGTGCCCGGTGTGCGCAAAATCATACGCATGCAGCAGCAGACGCAGCAGAACGGGCGGCAGATACTGGTGCCGGTGACGATTCAGGATCTGCGCACGATCAAGATCGTCAACTCGACCAACATGAAGGGCAGATCGTCGGCCAACATCAAGCTGGCGGCGGCCAACATGCTGCAGCAGTCGAAGCAAGGGCTAATACAGAAGAACGTGGTGCTGAGCAAGGATCAGCTGCTGCTGGACGATGGCGTGCTGTCCGATGCGGGCGGCCCCAGCTCCTCCTCCGACTCGGAAAGCTACGTGTTCGAGGACATTATGCAGCAGAGCAGCGCGGTGCTGGCGGAGGTCGAGCGGCAGCAGCAGAAGCATCACAGCAGCATCATCAGCGACTCGGACGTCGAGCCGGACGGGGACGATGGGGACGACGATGACGTCGACATGGAGGAGATTGGCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM632695             [                                                                                                                                                                                                                                                                                                                                                                   ccGGTGCTGAGCAAGGATCAGCTGCTGCTGGACGATGGCGTGCTGTCCGATGCGGGCGGCCCCAGCTCCTCCTCCGACTCGGAAAGCTACGTGTTCGAGGACATTATGCAGCAGAGCAGCGCGGTGCTGGCGGAGGTCGAGCGGCAGCAGCAGAAGCATCACAGCAGCATCATCAGCGACTCGGACGTCGAGCCGGACGGGGACGATGGGGACGACGATGACGTCGACATGGAGGAGATTGGCAAGGGCCGCAACCAGAACGGCACGTACCAGAAGCTGATGCTGACGGCGGAGGAGAAGCGGCTGCTGGCGAAGGAAGGCATCTCGCTGCCGACCAGCTACCCGCTCACCAAACACGAGGAGCGCGAGCTGAAGCGCATCCGGCGGAAGATTCGGAACAAGATTTCCGCCCAAGATTCGCGCAAGCGCAAGAAGGAGTACGTCGACGGGCTGGAGGAAAGAGTGAAACAATGCACCGAGGAGAACCAGAATCTGGTGAAACGAATCAAGATTCTGCAGAGCCAAAATCACGACCTCGTTAGCCAGATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCACCTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGGCAACACGGCCACCCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM624639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgGCGGCAGCAGCAGAAGCATCACAGCAGCATCATCAGCGACTCGGACGTCGAGCCGGACGGGGACGATGGGGACGACGATGACGTCGACATGGAGGAGATTGGCAAGGGCCGCAACCAGAACGGCACGTACCAGAAGCTGATGCTGACGGCGGAGGAGAAGCGGCTGCTGGCGAAGGAAGGCATCTCGCTGCCGACCAGCTACCCGCTCACCAAACACGAGGAGCGCGAGCTGAAGCGCATCCGGCGGAAGATTCGGAACAAGATTTCCGCCCAAGATTCGCGCAAGCGCAAGAAGGAGTACGTCGACGGGCTGGAGGAAAGAGTGAAACAATGCACCGAGGAGAACCAGAATCTGGTGAAACGAATCAAGATTCTGCAGAGCCAAAATCACGACCTCGTTAGCCAGATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCACCTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGGCAACACGGCCACCCAGCAGAACATACAGGACTCGATCGAAATGTCCGAGCTGATGCAGGACCCGGCCAATGACAAGCTGCAGGTGGTGCAGCAGAGCCGCCGTGCACTGCTATTCGACACGAAGGAACAATCGCACGCTGCCGCCACCGCCGAGGAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM642443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgCGTCGACGGGCTGGAGGAAAGAGTGAAACAATGCACCGAGGAGAACCAGAATCTGGTGAAACGAATCAAGATTCTGCAGAGCCAAAATCACGACCTCGTTAGCCAGATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCACCTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGGCAACACGGCCACCCAGCAGAACATACAGGACTCGATCGAAATGTCCGAGCTGATGCAGGACCCGGCCAATGACAAGCTGCAGGTGGTGCAGCAGAGCCGCCGTGCACTGCTATTCGACACGAAGGAACAATCGCACGCTGCCGCCACCGCCGAGGAGGAGCTGAACTTTGACGAGATCATGTCATCGTTCAACGCCAACGCGCTGATCGCCAACGAGCACGACTACTTCAGCGAGCTGGACGGAGGACGGTCGGGCGGTGGTGAGCCGCCGTCGGCCAAGCGCTCCAAGCTGCTGCTACCGACGACCACGACGCTGATCGACTACGACGTCGATGACGACGTGTGGAACGGGGGCAGCAAGATACGCATCAAGCAGGAAGCGGCCGGATCCATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM592388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgTCACGACCTCGTTAGCCAGATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCACCTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGGCAACACGGCCACCCAGCAGAACATACAGGACTCGATCGAAATGTCCGAGCTGATGCAGGACCCGGCCAACGACAAGCTGCAGGTGGTGCAGCAGAGCCGCCGTGCACTGCTATTCGACACGAAGGAACAATCGCACGCTGCCGCCACCGCCGAGGAGGAGCTGAACTTTGACGAGATCATGTCATCGTTCAACGCCAACGCGCTGATCGCCAACGAGCACGACTACTTCAGCGAGCTGGACGGAGGACGGTCGGGCGGTGGTGAGCCGCCGTCGGCCAAGCGCTCCAAGCTGCTGCTACCGACGACCACGACGCTGATCGACTACGACGTCGATGACGACGTGTGGAACGGGGGCAGCAAAATACGCATCAAGCAGGAAGCGGCCGGATCCATGTCGCCGGACAGCAGCAGCAGCAACGGCAACAACGAGCTGTTCGAGCAGAAGGTGCGCGAGTTCCAGGCATCGCTGCAGAAAAGCATCCGCGACGCGGCCGAAGAACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM623853             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgGCAGAAGGTGCGCGAGTTCCAGGCATCGCTGCAGAAAAGCATCCGCGATGCGGCCGAAGAACACACCACCGGCATGATGATGGCGGCCAAGTACGACCTCAACAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCAGCAGCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAATGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCGACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCGTTTTTAAGGCGCGTTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAAGCCTTTCGCAAT                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM608963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgCATTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAAGCCTTTCGCAATTTGATTTATTAGTACGTACCTAGGTATGTTGAGGGGTATGTTCGTGTGTGTGTGTTACTAGTAAGAGATAGTAGAAGATAACGGCTAAGTGCATATTCATTTATACACACACACACACTCACACACAAATCAAGTATTTTACTCGTATCCAATTGGCATAAGATGCAGGAACGGTTCACTATTACGTGTTTTTCTTACTTTTTCACTACACAAGTAGATAAGACAGTTGCCGCCACCGCGTTGGTATGGGGAACAGTTACACTAGCACGCACCGCTTACTTTGT]




>consensus_8704#0
CCGCCCACGCGTCCGCCCACGCGTCCGGGCGGGCGTCGGCGGTACCGGCGGCAGCACGAT
CATTCCCAAGAACGTAGTCCTGACCACGTCGAGCAGTGGCACGAATGGTCACAGCAGCGC
GGCCACCACCACCACCACCACCACCACCACCGTGCCCGGTGTGCGCAAAATCATACGCAT
GCAGCAGCAGACGCAGCAGAACGGGCGGCAGATACTGGTGCCGGTGACGATTCAGGATCT
GCGCACGATCAAGATCGTCAACTCGACCAACATGAAGGGCAGATCGTCGGCCAACATCAA
GCTGGCGGCGGCCAACATGCTGCAGCAGTCGAAGCAAGGGCTAATACAGAAGAACGTGGT
GCTGAGCAAGGATCAGCTGCTGCTGGACGATGGCGTGCTGTCCGATGCGGGCGGCCCCAG
CTCCTCCTCCGACTCGGAAAGCTACGTGTTCGAGGACATTATGCAGCAGAGCAGCGCGGT
GCTGGCGGAGGTCGAGCGGCAGCAGCAGAAGCATCACAGCAGCATCATCAGCGACTCGGA
CGTCGAGCCGGACGGGGACGATGGGGACGACGATGACGTCGACATGGAGGAGATTGGCAA
GGGCCGCAACCAGAACGGCACGTACCAGAAGCTGATGCTGACGGCGGAGGAGAAGCGGCT
GCTGGCGAAGGAAGGCATCTCGCTGCCGACCAGCTACCCGCTCACCAAACACGAGGAGCG
CGAGCTGAAGCGCATCCGGCGGAAGATTCGGAACAAGATTTCCGCCCAAGATTCGCGCAA
GCGCAAGAAGGAGTACGTCGACGGGCTGGAGGAAAGAGTGAAACAATGCACCGAGGAGAA
CCAGAATCTGGTGAAACGAATCAAGATTCTGCAGAGCCAAAATCACGACCTCGTTAGCCA
GATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCAC
CTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGG
CAACACGGCCACCCAGCAGAACATACAGGACTCGATCGAAATGTCCGAGCTGATGCAGGA
CCCGGCCAATGACAAGCTGCAGGTGGTGCAGCAGAGCCGCCGTGCACTGCTATTCGACAC
GAAGGAACAATCGCACGCTGCCGCCACCGCCGAGGAGGAGCTGAACTTTGACGAGATCAT
GTCATCGTTCAACGCCAACGCGCTGATCGCCAACGAGCACGACTACTTCAGCGAGCTGGA
CGGAGGACGGTCGGGCGGTGGTGAGCCGCCGTCGGCCAAGCGCTCCAAGCTGCTGCTACC
GACGACCACGACGCTGATCGACTACGACGTCGATGACGACGTGTGGAACGGGGGCAGCAA
GATACGCATCAAGCAGGAAGCGGCCGGATCCATGTCGCCGGACAGCAGCAGCAGCAACGG
CAACAACGAGCTGTTCGAGCAGAAGGTGCGCGAGTTCCAGGCATCGCTGCAGAAAAGCAT
CCGCGACGCGGCCGAAGAACACACCACCGGCATGATGATGGCGGCCAAGTACGACCTCAA
CAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCAGCA
GCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAA
TGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTC
GACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCA
GAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAA
GTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCG
ACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCGTTTTTAAGGCGCGTTAAAGAAGC
GCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTAG
CAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACG
AAGCCTTTCGCAATTTGATTTATTAGTACGTACCTAGGTATGTTGAGGGGTATGTTCGTG
TGTGTGTGTTACTAGTAAGAGATAGTAGAAGATAACGGCTAAGTGCATATTCATTTATAC
ACACACACACACTCACACACAAATCAAGTATTTTACTCGTATCCAATTGGCATAAGATGC
AGGAACGGTTCACTATTACGTGTTTTTCTTACTTTTTCACTACACAAGTAGATAAGACAG
TTGCCGCCACCGCGTTGGTATGGGGAACAGTTACACTAGCACGCACCGCTTACTTTGT

consensusID : consensus_8704#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 801
fasta sequence 
                              [CCCCAGGTTNCACGACATATGATGGCGGCAGTACGACTCAACAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCACCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAATGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTTGTCGAGTCGTC---CCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCTGTTTTTAAGGCGCGGTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAAACCTTTCGCAATTTTGATTCTATTAGTACGTACCTAGGTATGTGAGGGGTATGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTTACTATTAAGAGATAGTAGAACGGANTACACCGGGCTAAGTGCATTATTCATTTCCACCACACAACTCACACACAAAATCAAGTATTTTCACTCGTATCCAATTGGCNCTANGATGCCGGAACGGGTTCAATATTACG]

[+] EMBL AL694104             [CCCCAGGTTNCACGACATATGATGGCGGCAGTACGACTCAACAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCAGCAGGATGGTGGACTGTACGAGATGTCTCTCGACACGTTCTCGAAGGCTGGCCTCAACAATGGTGGTATCGATCTGCTCGGTAGCGTTCGTGCCGAGCCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTC  TTTG TGTTCGTTCAAAGTTGTCGAGTCGTCGAGCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCTGTTTTTAAGGCGCGGTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAAACCTTTCGCAATTTTGATTCTATTAGTACGTACCTAGGTATGTGAGGGGTATGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTTACTATTAAGAGATAGTAGAACGGANTACACCGGGCTAAGTGCATTATTCATTTCCACCACACAACTCACACACAAAATCAAGTATTTTCACTCGTATCCAATTGGCNCTANGATGCCGGAACGGGTTCAATATTACG]
[+] EMBL BM589962             [                                                       ccGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCACCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAATGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTTGTCGAGTCGTC   CCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCTGTTTTTAAGGCGCGGTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAA                                                                                                                                                                                                                            ]
[+] EMBL BM625276             [                                                                                ccGCAAGCAGCAGCAGCACCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAATGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTTGTCGAGTCGTC   CCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCTGTTTTTAAGGCGCGGTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTAGCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTACG                                                                                                                                                                                                                              ]




>consensus_8704#1
CCCCAGGTTNCACGACATATGATGGCGGCAGTACGACTCAACAGTGAGGTCATTGTGGAT
CGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCACCAGGATGGTGGACTGTACGAG
ATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAATGGCGGTATCGATCTGCTCGGT
AGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTCGACCGGAGGTGATGCTAGTGAC
GCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCAGAACAACAAGCGTAAGCTGCTG
CTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTT
TTCTTTCTTTTTGTTGTTCGTTCAAAGTTGTCGAGTCGTCCCGGCTCGTGGAAAACTAAT
TGTAAATAGGTCTCTGTTTTTAAGGCGCGGTAAAGAAGCGCAACAGTTTTCGGTTAACCA
TTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTAGCAAACACATTGCAACACAGGT
AATGCATTTTGTCTATAATATGTATGTAATGACGCTACGAAACCTTTCGCAATTTTGATT
CTATTAGTACGTACCTAGGTATGTGAGGGGTATGTTCGTGTGTGTGTGTGTGTGTGTGTG
TGTTACTATTAAGAGATAGTAGAACGGANTACACCGGGCTAAGTGCATTATTCATTTCCA
CCACACAACTCACACACAAAATCAAGTATTTTCACTCGTATCCAATTGGCNCTANGATGC
CGGAACGGGTTCAATATTACG

consensusID : consensus_8704#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 592
fasta sequence 
                              [CCCCCNGGTTTATTCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCGACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCGTTTTTAAGGCGCGTTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTAGCAAACACATTGCAAAACAGGTAATGCATGTCTATAATATGTATGTAATGACGCTACGAAGCCTTTCGCAATTTGATTTATTAGTACGTACCTAGGTATGTGAAGGGGTATGTGCGTGTGTGTGTGTGTTACTATTAAGAGATAGTAGAAGATAACGGCTAAGTGCATATTCATTTCACACACACACTCACACACAAATCAAGTATTTTACTCGTATCCAATTGGCNTAAGATGCNCGGAACGGTTCACTATTACGTGTTTCTTTCTTAATTATCACTACACAAGTCAGATAACGACAGTTGCCGCCACCGCGTTGGTATGGGGAACAGTTACACTAGCACGCACCGCTTACTTT]

[+] EMBL AL692930             [CCCCCNGGTTTATTCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCGACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCGTTTTTAAGGCGCGTTAAAGAAGCGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTAGCAAACACATTGCAAAACAGGTAATGCATGTCTATAATATGTATGTAATGACGCTACGAAGCCTTTCGCAATTTGATTTATTAGTACGTACCTAGGTATGTGAAGGGGTATGTGCGTGTGTGTGTGTGTTACTATTAAGAGATAGTAGAAGATAACGGCTAAGTGCATATTCATTTCACACACACACTCACACACAAATCAAGTATTTTACTCGTATCCAATTGGCNTAAGATGCNCGGAACGGTTCACTATTACGTGTTTCTTTCTTAATTATCACTACACAAGTCAGATAACGACAGTTGCCGCCACCGCGTTGGTATGGGGAACAGTTACACTAGCACGCACCGCTTACTTT]




>consensus_8704#2
CCCCCNGGTTTATTCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAAGT
GAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCGAC
CCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCGTTTTTAAGGCGCGTTAAAGAAGCGC
AACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTAGCA
AACACATTGCAAAACAGGTAATGCATGTCTATAATATGTATGTAATGACGCTACGAAGCC
TTTCGCAATTTGATTTATTAGTACGTACCTAGGTATGTGAAGGGGTATGTGCGTGTGTGT
GTGTGTTACTATTAAGAGATAGTAGAAGATAACGGCTAAGTGCATATTCATTTCACACAC
ACACTCACACACAAATCAAGTATTTTACTCGTATCCAATTGGCNTAAGATGCNCGGAACG
GTTCACTATTACGTGTTTCTTTCTTAATTATCACTACACAAGTCAGATAACGACAGTTGC
CGCCACCGCGTTGGTATGGGGAACAGTTACACTAGCACGCACCGCTTACTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8704#0      CCGCCCACGCGTCCGCCCACGCGTCCGGGCGGGCGTCGGCGGTACCGGCGGCAGCACGAT 60
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CATTCCCAAGAACGTAGTCCTGACCACGTCGAGCAGTGGCACGAATGGTCACAGCAGCGC 120
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GGCCACCACCACCACCACCACCACCACCACCGTGCCCGGTGTGCGCAAAATCATACGCAT 180
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCAGCAGCAGACGCAGCAGAACGGGCGGCAGATACTGGTGCCGGTGACGATTCAGGATCT 240
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCGCACGATCAAGATCGTCAACTCGACCAACATGAAGGGCAGATCGTCGGCCAACATCAA 300
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCTGGCGGCGGCCAACATGCTGCAGCAGTCGAAGCAAGGGCTAATACAGAAGAACGTGGT 360
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCTGAGCAAGGATCAGCTGCTGCTGGACGATGGCGTGCTGTCCGATGCGGGCGGCCCCAG 420
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CTCCTCCTCCGACTCGGAAAGCTACGTGTTCGAGGACATTATGCAGCAGAGCAGCGCGGT 480
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCTGGCGGAGGTCGAGCGGCAGCAGCAGAAGCATCACAGCAGCATCATCAGCGACTCGGA 540
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CGTCGAGCCGGACGGGGACGATGGGGACGACGATGACGTCGACATGGAGGAGATTGGCAA 600
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GGGCCGCAACCAGAACGGCACGTACCAGAAGCTGATGCTGACGGCGGAGGAGAAGCGGCT 660
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCTGGCGAAGGAAGGCATCTCGCTGCCGACCAGCTACCCGCTCACCAAACACGAGGAGCG 720
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CGAGCTGAAGCGCATCCGGCGGAAGATTCGGAACAAGATTTCCGCCCAAGATTCGCGCAA 780
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GCGCAAGAAGGAGTACGTCGACGGGCTGGAGGAAAGAGTGAAACAATGCACCGAGGAGAA 840
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CCAGAATCTGGTGAAACGAATCAAGATTCTGCAGAGCCAAAATCACGACCTCGTTAGCCA 900
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GATGAAGCGCATCCAGTCGCTGCTGACCAAGGGCACGAGCAAAACGACCCAACCGGCCAC 960
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CTGCCTGATGGTGCTGCTGATCAGCATGGCGCTGGTTGCCGTGCCGAACCTGAAGCTGGG 1020
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CAACACGGCCACCCAGCAGAACATACAGGACTCGATCGAAATGTCCGAGCTGATGCAGGA 1080
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CCCGGCCAATGACAAGCTGCAGGTGGTGCAGCAGAGCCGCCGTGCACTGCTATTCGACAC 1140
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GAAGGAACAATCGCACGCTGCCGCCACCGCCGAGGAGGAGCTGAACTTTGACGAGATCAT 1200
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GTCATCGTTCAACGCCAACGCGCTGATCGCCAACGAGCACGACTACTTCAGCGAGCTGGA 1260
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CGGAGGACGGTCGGGCGGTGGTGAGCCGCCGTCGGCCAAGCGCTCCAAGCTGCTGCTACC 1320
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GACGACCACGACGCTGATCGACTACGACGTCGATGACGACGTGTGGAACGGGGGCAGCAA 1380
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      GATACGCATCAAGCAGGAAGCGGCCGGATCCATGTCGCCGGACAGCAGCAGCAGCAACGG 1440
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CAACAACGAGCTGTTCGAGCAGAAGGTGCGCGAGTTCCAGGCATCGCTGCAGAAAAGCAT 1500
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      CCGCGACGCGGCCGAAGAACACACCACCGGCATGATGATGGCGGCCAAGTACGACCTCAA 1560
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      ----------------------CCCCAGGTTNCACGACATATGATGGCGGCAGTACGACT 38
                                                                                  

consensus_8704#0      CAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCAGCA 1620
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      CAACAGTGAGGTCATTGTGGATCGCGATCTGTTCGATTTGGTCGGCAAGCAGCAGCAGCA 98
                                                                                  

consensus_8704#0      GCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAA 1680
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      CCAGGATGGTGGACTGTACGAGATGTCTCTCGATACGTTCTCGAAGGCTGGCCTCAACAA 158
                                                                                  

consensus_8704#0      TGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTC 1740
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      TGGCGGTATCGATCTGCTCGGTAGCGTTCGGGCCGAACCGACCGTTGTCAGTGCCGACTC 218
                                                                                  

consensus_8704#0      GACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCA 1800
consensus_8704#2      ------------------------------------------------------------
consensus_8704#1      GACCGGAGGTGATGCTAGTGACGCGCGGAAGCTTAACGCATCCCAGCAGATTCAGCAGCA 278
                                                                                  

consensus_8704#0      GAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAA 1860
consensus_8704#2      --CCCCCNGGTTTATTCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAA 58
consensus_8704#1      GAACAACAAGCGTAAGCTGCTGCTGTAAGCAGTGTACAAGTTGTCGTTGTACGACTAGAA 338
                         *  *  *  **  ********************************************

consensus_8704#0      GTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCG 1920
consensus_8704#2      GTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTCGTCGAGTCG 118
consensus_8704#1      GTGAAGAAGAAGCTGGCTGTTTTTCTTTCTTTTTGTTGTTCGTTCAAAGTTGTCGAGTCG 398
                      ************************************************** *********

consensus_8704#0      ACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTC-GTTTTTAAGGCGCGTTAAAGAAG 1979
consensus_8704#2      ACCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTC-GTTTTTAAGGCGCGTTAAAGAAG 177
consensus_8704#1      TCCCGGCTCGTGGAAAACTAATTGTAAATAGGTCTCTGTTTTTAAGGCGCGGTAAAGAAG 458
                       *********************************** ************** ********

consensus_8704#0      CGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTA 2039
consensus_8704#2      CGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTTCCCCTTCCTCACACACACCGTTA 237
consensus_8704#1      CGCAACAGTTTTCGGTTAACCATTTTCATTTATCCTCCCCCTTCCCCTCACACACCGTTA 518
                      ************************************ ******** * ************

consensus_8704#0      GCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTAC 2099
consensus_8704#2      GCAAACACATTGCAAAACAGGTAATGCAT---GTCTATAATATGTATGTAATGACGCTAC 294
consensus_8704#1      GCAAACACATTGCAACACAGGTAATGCATTTTGTCTATAATATGTATGTAATGACGCTAC 578
                      *************** *************   ****************************

consensus_8704#0      GAAGCCTTTCGCAATTT-GATT-TATTAGTACGTACCTAGGTATGTTGAGGG-------- 2149
consensus_8704#2      GAAGCCTTTCGCAATTT-GATT-TATTAGTACGTACCTAGGTATGTGAAGGG-------- 344
consensus_8704#1      GAAACCTTTCGCAATTTTGATTCTATTAGTACGTACCTAGGTATGTGAGGGGTATGTTCG 638
                      *** ************* **** ***********************   ***        

consensus_8704#0      ---GTATGTTCGTGTGTGTGTGT--TACTAGTAAGAGATAGTAGAA--GATAAC----GG 2198
consensus_8704#2      ---GTATGTGCGTGTGTGTGTGTGTTACTATTAAGAGATAGTAGAA--GATAAC----GG 395
consensus_8704#1      TGTGTGTGTGTGTGTGTGTGTGTGTTACTATTAAGAGATAGTAGAACGGANTACACCGGG 698
                         ** ***  ************  ***** ***************  **  **    **

consensus_8704#0      CTAAGTGCAT-ATTCATTTATACACACACACACACTCACACACAAA-TCAAGTATTTT-A 2255
consensus_8704#2      CTAAGTGCAT-ATTCATTT-----CACACACACACTCACACACAAA-TCAAGTATTTT-A 447
consensus_8704#1      CTAAGTGCATTATTCATTT---CCACCACACA-ACTCACACACAAAATCAAGTATTTTCA 754
                      ********** ********       ****** ************* *********** *

consensus_8704#0      CTCGTATCCAATTGGCA-TAAGATGCA-GGAACGGTTCACTATTACGTGTTTTTCTTACT 2313
consensus_8704#2      CTCGTATCCAATTGGCN-TAAGATGCNCGGAACGGTTCACTATTACGTGTTTCTTTCTTA 506
consensus_8704#1      CTCGTATCCAATTGGCNCTANGATGCCGGAACGGGTTCAATATTACG------------- 801
                      ****************  ** *****  * *  ****** *******             

consensus_8704#0      TTT-TCACTACACAAGT-AGATAA-GACAGTTGCCGCCACCGCGTTGGTATGGGGAACAG 2370
consensus_8704#2      ATTATCACTACACAAGTCAGATAACGACAGTTGCCGCCACCGCGTTGGTATGGGGAACAG 566
consensus_8704#1      ------------------------------------------------------------
                                                                                  

consensus_8704#0      TTACACTAGCACGCACCGCTTACTTTGT 2398
consensus_8704#2      TTACACTAGCACGCACCGCTTACTTT-- 592
consensus_8704#1      ----------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)