cluster # 8705

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8705 cluster # 8705 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8705#0 length = 987 sequences # 8

consensus_8705#1 length = 675 sequences # 2
consensus_8705#2 length = 441 sequences # 1

consensusID : consensus_8705#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 987
fasta sequence

                              [CGGAATTCCTCGAGAACTGTTGGCCAACTGGGATCGTACCTTGTTGTGGTATCAAAATACGTAAACACAGCTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAG-TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG-AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTTTCACGTGCAGGGCTTCC-GGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAGACTACAACCCGCACAGTCCGATCATACTGGAGGACAACCGGCTACAGCAGGACGCGATGCGTTCGGCCGGCAGTCCGATGCCGCAGCCTTTCCTCTGAAATCTGTCTCGGAACGAAATACAT-CCAACCATTGTGTGATACGAAGCGTTCGCATGACTGCAAAAAAAAAAAAAAGGCCACATGTTCCCCAGCCG]

[-] EMBL CNS08V8P             [CGGAATTCCTCGAGAACTGTTGGCCAACTGGGATCGTACCTTGTTGTGGTATCAAAATACGTAAACACAGCTGACAGCCAAAAAACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGAATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAG TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGG AATGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTGGCTGCTACGATACACCCGACCGCTTCCCTCCCTGTTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCCATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTTACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGAACGAACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCATTTTCACGTGCAGGGCTTCC GGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAAACTACAACCCGCACAGTCCGATCATACTG                                                                                                                                                                     ]
[+] EMBL CNS08V8O             [                                               GGTATCAAAATACGTAAACACAGCTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAGCTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTTTCACGTGCAGGGCTTCC GGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAGACTACAACCCGCACAGTCCGATCATACTGGAGGACAACCGGCTACAGCAGGACGCGATGCGTTCGGCCGGCAGTTCGATGCCGCAGCCTTTCCTCTGAAATCTGTCTCGGAACGAAATACAT CCAACCATTGTGTGATACGAAGCGTTCGCATGACTGCAAAAAAAAAAAAAAGGCCACATGTTCCCCAGCCG]
[+] EMBL BX608520             [                                                                  caAGCTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAG TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTTTCACGTGCAGGGCTTCC GGAACCGGGGCACGTTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAGACTACAACCCGCACAGTCCGATCATACTGGAGGACAACCGGCTACAGCAGGACGCGATGCGTTCGGCCGGCAGTCCGATGCCGCAGCCTTTCCTCTGAAATCTGTCTCGGAACGAAATACATCCCAACC                                                                 ]
[+] EMBL CNS09GFJ             [                                                                       TGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAG TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTTTCACGTGCAGGGCTTCC GGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAGACTACAACCCGCATAGTCCGATCATACTGGAGGACAACCGGCTACAGCAGGACGCGATGCGTTCGGCCGGCAGTCCGATGCCGCAGCCTTTCCTCTGAAATCTGTCTCG                                                                                     ]
[+] EMBL BX626168             [                                                                                           GCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAG TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAAC                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS09GFK             [                                                                                                     ATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAG TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGG AATGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTGGCTGCTACGAAACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGGTAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTTTCACGTGCAGGGCTTCC GGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAGACTACAACCCGCATAGTCCGATCATACTG                                                                                                                                                                     ]
[+] EMBL CNS08Y01             [                                                                                                         TAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATCCAATTGCGCTAAAAGTGTAGTAAAACAGAAG TTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCA CGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTGTCACGTGCAGGGCTTCCGGGAACCGGGGCACGGTGCATCTG                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08Y02             [                                                                                                                                                                                                                                                                                                                             TCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCAATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCAACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGAACAGCCCGAACAACATCTACTCGG AAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGAACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTACGTGAAGGACGGGGTGGAGCACATTCGGATGCAATTTCACGTGCAGGGCTTCC GGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAAACTACAACCCGCACAGTCCGATCATACTG                                                                                                                                                                     ]




>consensus_8705#0
CGGAATTCCTCGAGAACTGTTGGCCAACTGGGATCGTACCTTGTTGTGGTATCAAAATAC
GTAAACACAGCTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTAT
TTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTA
GTAAAACAGAAGTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACT
ACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTC
CCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGC
CGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGA
AAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCAT
GCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGACAGCCCGAACAACATCTACTC
GGAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGAT
CAAGGGCTACGGTGAGGAAACGCGCCGCGGACGGAGAACTCGTGTCGCCCACACGCAGTA
CGTGAAGGACGGGGTGGAGCACATTCGGATGCAGTTTCACGTGCAGGGCTTCCGGAACCG
GGGCACGGTGCATCTGGAGAAGCGCAAAACAGACGCCGGTGGGTACGAGTATCGGTATCT
GTTCGTGCAGCTAGACTACAACCCGCACAGTCCGATCATACTGGAGGACAACCGGCTACA
GCAGGACGCGATGCGTTCGGCCGGCAGTCCGATGCCGCAGCCTTTCCTCTGAAATCTGTC
TCGGAACGAAATACATCCAACCATTGTGTGATACGAAGCGTTCGCATGACTGCAAAAAAA
AAAAAAAGGCCACATGTTCCCCAGCCG

consensusID : consensus_8705#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 675
fasta sequence

                              [GGCAAGAATCGGCACGTNGGTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAGTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGANCAGCCCGAACAACATCTACTCGGAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGCAAACGCGCCGCGGACGGAGANACTCGATGTACGCCCACACGCAGTACGTGAAGGACGGGGCTGGAGGCACATTCCGGATGGCANAGGGNTCACNCGTGCAGGGCTTC]

[+] EMBL BX467138             [GGCAAGAATCGGCACGTNGGTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAGTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGANCAGCCCGAACAACATCTACTCGGAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGCAAACGCGCCGCGGACGGAGANACTCGATGTACGCCCACACGCAGTACGTGAAGGACGGGGCTGGAGGCACATTCCGGATGGCANAGGGNTCACNCGTGCAGGGCTTC]
[+] EMBL BM583785             [                       ccGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTATTTATCTAATTAAGTAAAGGGTTCGACTTAATCAATAGCATTCATTTGCGCTAAAAGTGTAATAAAACAGAAGTTTCCAGCATTTTGCTACAAGCATGTCCCTCCTGGCACTGCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACCGCTTCCCTCCCTGGTGTGCCGATACTCAACCGGAAATGCTCCCAACCACAGCTCGAAATCGCTTTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGCCCGATCGGGGAGCGGGTGAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTCAC                                                                                                                                                                                                                                                            ]




>consensus_8705#1
GGCAAGAATCGGCACGTNGGTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAA
TTGTTGTATTTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCT
AAAAGTGTAGTAAAACAGAAGTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACT
GCGTCCACTACTAGTCAGACAGCGCAACCTTTCCCTGTCGCTGCTACGATACACCCGACC
GCTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATC
CCTCTCGGCCGGCAGCGACCGAACCGACGTATCGACCGATGTACGTCCAATTGGGGAGCG
GGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGT
CACCGGCATGCTGTTTTACGTCATCTTTTGGGAGCTGTTTTCCTCGGANCAGCCCGAACA
ACATCTACTCGGAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGACGCACTCG
GGGCACCGATCAAGGGCTACGGTGAGGCAAACGCGCCGCGGACGGAGANACTCGATGTAC
GCCCACACGCAGTACGTGAAGGACGGGGCTGGAGGCACATTCCGGATGGCANAGGGNTCA
CNCGTGCAGGGCTTC

consensusID : consensus_8705#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 441
fasta sequence

                              [GGCAGAATCGCCAGAGGNTNATCTAATTTAGTAAAGGGTTCGACCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAGTTTCCAGCATTTTGNCACAAGCATGTCCCTCCTGGCACTGACGTCCACTACTAGTCAGACAGGCAAACCTTTCCCTGGTCGCTGCTACGATACACCCGACGTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACACAGTCGAAATCCCTCTCGGCGGCAGCGAACGAACCGACCGTATCGACCGATGTACGTCCAATTGGGGAGCAGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTACACCGGCATGCTAGTANATATACGTCATCTTACTCTGGNGAGCTGNNATNNNACCTCGGACAGCCGAACAACA]

[+] EMBL AL696678             [GGCAGAATCGCCAGAGGNTNATCTAATTTAGTAAAGGGTTCGACCAATCAATAGCATTCAATTGCGCTAAAAGTGTAGTAAAACAGAAGTTTCCAGCATTTTGNCACAAGCATGTCCCTCCTGGCACTGACGTCCACTACTAGTCAGACAGGCAAACCTTTCCCTGGTCGCTGCTACGATACACCCGACGTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACACAGTCGAAATCCCTCTCGGCGGCAGCGAACGAACCGACCGTATCGACCGATGTACGTCCAATTGGGGAGCAGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTACACCGGCATGCTAGTANATATACGTCATCTTACTCTGGNGAGCTGNNATNNNACCTCGGACAGCCGAACAACA]




>consensus_8705#2
GGCAGAATCGCCAGAGGNTNATCTAATTTAGTAAAGGGTTCGACCAATCAATAGCATTCA
ATTGCGCTAAAAGTGTAGTAAAACAGAAGTTTCCAGCATTTTGNCACAAGCATGTCCCTC
CTGGCACTGACGTCCACTACTAGTCAGACAGGCAAACCTTTCCCTGGTCGCTGCTACGAT
ACACCCGACGTTCCCTCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACACAGTC
GAAATCCCTCTCGGCGGCAGCGAACGAACCGACCGTATCGACCGATGTACGTCCAATTGG
GGAGCAGGGTCAAGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTG
TCGGCGTACACCGGCATGCTAGTANATATACGTCATCTTACTCTGGNGAGCTGNNATNNN
ACCTCGGACAGCCGAACAACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8705#0      CGGAATTCCTCGAGAACTGTTGGCCAACTGGGATCGTACCTTGTTGTGGTATCAAAATAC 60
consensus_8705#1      --------------------------------------------------GGCAAGAATC 10
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      GTAAACACAGCTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTAT 120
consensus_8705#1      G-GCACGTNGGTGACAGCCAAAATACTGCCGGCTTTGCAGAATTTTAATAATTGTTGTAT 69
consensus_8705#2      -----------------------------------GGCAGAATCGCCAGAG-------GN 18
                                                          *******    * *          

consensus_8705#0      TTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTA 180
consensus_8705#1      TTATCTAATTTAGTAAAGGGTTCGACCCAATCAATAGCATTCAATTGCGCTAAAAGTGTA 129
consensus_8705#2      TNATCTAATTTAGTAAAGGGTTCGACC-AATCAATAGCATTCAATTGCGCTAAAAGTGTA 77
                      * ************************* ********************************

consensus_8705#0      GTAAAACAGAAGTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTG-CGTCCAC 239
consensus_8705#1      GTAAAACAGAAGTTTCCAGCATTTTGCCACAAGCATGTCCCTCCTGGCACTG-CGTCCAC 188
consensus_8705#2      GTAAAACAGAAGTTTCCAGCATTTTGNCACAAGCATGTCCCTCCTGGCACTGACGTCCAC 137
                      ************************** ************************* *******

consensus_8705#0      TACTAGTCAGACAGCGCAACCTTTCCCTG-TCGCTGCTACGATACACCCGACCGCTTCCC 298
consensus_8705#1      TACTAGTCAGACAGCGCAACCTTTCCCTG-TCGCTGCTACGATACACCCGACCGCTTCCC 247
consensus_8705#2      TACTAGTCAGACAGGCAAACCTTTCCCTGGTCGCTGCTACGATACACCCGAC--GTTCCC 195
                      **************   ************ **********************   *****

consensus_8705#0      TCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCG 358
consensus_8705#1      TCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAACCACAGCTCGAAATCCCTCTCG 307
consensus_8705#2      TCCCTGGTGTGCCGATACTCTACCGGAAATGCTCCCAAC-ACAG-TCGAAATCCCTCTCG 253
                      *************************************** **** ***************

consensus_8705#0      GCCGGCAGCGACCGAACCGAC-GTATCGACCGATGTACGTCCAATTGGGGAGC-GGGTCA 416
consensus_8705#1      GCCGGCAGCGACCGAACCGAC-GTATCGACCGATGTACGTCCAATTGGGGAGC-GGGTCA 365
consensus_8705#2      GC-GGCAGCGAACGAACCGACCGTATCGACCGATGTACGTCCAATTGGGGAGCAGGGTCA 312
                      ** ******** ********* ******************************* ******

consensus_8705#0      AGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGT-CACC 475
consensus_8705#1      AGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGT-CACC 424
consensus_8705#2      AGGAAAACACGAAAACCGCCAGCTACATGGGCGTAATACTGCTCGGTGTCGGCGTACACC 372
                      ******************************************************* ****

consensus_8705#0      GGCATGCT----GTTTTACGTCATCTT----TTGGGAGCTGTTTTCCT----CGGAC-AG 522
consensus_8705#1      GGCATGCT----GTTTTACGTCATCTT----TTGGGAGCTGTTTTCCT----CGGANCAG 472
consensus_8705#2      GGCATGCTAGTANATATACGTCATCTTACTCTGGNGAGCTGNNATNNNACCTCGGAC--A 430
                      ********      * ***********    * * ******   *       ****    

consensus_8705#0      CCCGAACAACATCTACTCGGAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGA 582
consensus_8705#1      CCCGAACAACATCTACTCGGAAGCGCTGGAGCGGGTGAAGGAAGAGCCCCGGGTAAAGGA 532
consensus_8705#2      GCCGAACAACA------------------------------------------------- 441
                       **********                                                 

consensus_8705#0      CGCACTCGGGGCACCGATCAAGGGCTACGGTGAGG-AAACGCGCCGCGGACGGAGAA-CT 640
consensus_8705#1      CGCACTCGGGGCACCGATCAAGGGCTACGGTGAGGCAAACGCGCCGCGGACGGAGANACT 592
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      CG-TGT-CGCCCACACGCAGTACGTGAAGGACGGGGT--GGAGCACATTC-GGATGC--- 692
consensus_8705#1      CGATGTACGCCCACACGCAGTACGTGAAGGACGGGGCTGGAGGCACATTCCGGATGGCAN 652
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      ---AGTTTCACGTGCAGGGCTTCCGGAACCGGGGCACGGTGCATCTGGAGAAGCGCAAAA 749
consensus_8705#1      AGGGNTCACNCGTGCAGGGCTTC------------------------------------- 675
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      CAGACGCCGGTGGGTACGAGTATCGGTATCTGTTCGTGCAGCTAGACTACAACCCGCACA 809
consensus_8705#1      ------------------------------------------------------------
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      GTCCGATCATACTGGAGGACAACCGGCTACAGCAGGACGCGATGCGTTCGGCCGGCAGTC 869
consensus_8705#1      ------------------------------------------------------------
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      CGATGCCGCAGCCTTTCCTCTGAAATCTGTCTCGGAACGAAATACATCCAACCATTGTGT 929
consensus_8705#1      ------------------------------------------------------------
consensus_8705#2      ------------------------------------------------------------
                                                                                  

consensus_8705#0      GATACGAAGCGTTCGCATGACTGCAAAAAAAAAAAAAAGGCCACATGTTCCCCAGCCG 987
consensus_8705#1      ----------------------------------------------------------
consensus_8705#2      ----------------------------------------------------------