cluster # 8708

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Anopheles gambiae
cluster # 8708 cluster # 8708 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8708#0 length = 1784 sequences # 9

consensus_8708#1 length = 656 sequences # 1
consensus_8708#2 length = 600 sequences # 1

consensusID : consensus_8708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1784
fasta sequence

                              [CCGGATGCGGAGAGGTTCGATCCCGACCGATTTCTGCCCGAACGTTGCAAGAATAGAATGGGCTGTGCCTTTATGCCGTTCAACACAGGGAGTCGCAATTGTATTGGCTCACGGTACGCCATGCAGATTATGAAGATTATTTTGTGCAAGATCATTCGGAGATATGAGCTCCACACCGAGCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATACTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAACGAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCTCATCCAACCGGGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTATCTGACCAAAGTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCGGTCGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGGCGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGT-GGCCGGCTTGT]

[+] EMBL BM656049             [CCGGATGCGGAGAGGTTCGATCCCGACCGATTTCTGCCCGAACGTTGCAAGAATAGAATGGGCTGTGCCTTTATGCCGTTCAACACAGGGAGTCGCAATTGTATTGGCTCACGGTACGCCATGCAGATTATGAAGATTATTTTGTGCAAGATCATTCGGAGATATGAGCTCCACACCGAGCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATACTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAAGGAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCAGCTTGCCATCTCGTCATAAGCCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08H19             [                                                                                                                                                                                                                                                                                   cACGAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTTAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTGGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08GTQ             [                                                                                                                                                                                                                                                                                   ttCGAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACCAATCGTCCTGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCTCATCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS0910X             [                                                                                                                                                                                                                                                                                         TTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACGCTCCAAAATCTCTTCCAAAGTGAGCTGAATGTCCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGCATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCACTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08IRR             [                                                                                                                                                                                                                                                                                               ATATTTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTTAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATAAACGTCGTTTCATTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATTGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTTATGGGGCTGAGAATGTTCCCATAATGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08IRP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTGATGTACTCCGCCAAGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACAAATCGACCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTAACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCTCATCCAACCGGGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTATCTGACCAAAGTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCGGTCGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGGCGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGT GGCCG      ]
[-] EMBL CNS0910W             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGCATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTTGTTTCACTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCTCATCCAACCGGGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTATCTGACCAAAGTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCGGTCGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGGCGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGTGGGCCGGCTTGT]
[-] EMBL CNS08GTP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGAATGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCTCATCCAACCGGGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTATCTGACCAAAGTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCGGTCGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGGCGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGT GGCCGct    ]
[-] EMBL CNS08H18             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACCAATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCGTGCTGCGTTTCGTCTCATCCAACCGGGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTATCTGACCAAAGTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCGGTCGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGACGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGT GGCCGGCTTG ]




>consensus_8708#0
CCGGATGCGGAGAGGTTCGATCCCGACCGATTTCTGCCCGAACGTTGCAAGAATAGAATG
GGCTGTGCCTTTATGCCGTTCAACACAGGGAGTCGCAATTGTATTGGCTCACGGTACGCC
ATGCAGATTATGAAGATTATTTTGTGCAAGATCATTCGGAGATATGAGCTCCACACCGAG
CTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATAC
TTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAACGAATTATAAATATGTTCCATCA
GTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACC
TCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGC
TCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACG
TACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGTAAAA
TTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGTAGCA
GCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACA
CTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTT
CGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATC
CAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAG
TGAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTTGCGGTATGGC
GGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACCAATCGTCCAG
CTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACGTCATAAAGCT
CTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCATGTCACTGAT
AGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTACGGATTGTTGC
ATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTGAGAATGTTCC
CATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCTCATCCAACCG
GGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTATCTGACCAAA
GTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCGGTCGGGTAAC
GTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTTTTTCACAGTC
TTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAATCGCAGTAAT
ACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGGCGACTAATCGCACT
TCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGT
CTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTA
TGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATC
CATTGCGGCTGGTGCTCTGCTCAACCGTAAAGTGGCCGGCTTGT

consensusID : consensus_8708#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 656
fasta sequence

                              [AGATATGAGCTCCACCCCCGAGCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATACTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAAGGAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BM618363             [AGATATGAGCTCCACCCCCGAGCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATACTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAAGGAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACACTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTAAACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACATTTCGTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTGGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_8708#1
AGATATGAGCTCCACCCCCGAGCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGC
TCTAAAGCAGGAGCAGGGATACTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAAG
GAATTATAAATATGTTCCATCAGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTACA
CTTTCGATAGCGTTGGTTGACCTCGGACATGTCCAACATCATCTCTCTCGCCCGATAGTA
AACGCACGATTCCATTTTGAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAAT
CTCATCCATCTTTGAGTAAACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACATTTC
GTAGCAGCTTGCCATCTCGTCATAAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCTG
GTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTGAGCAA
TTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGGAAGCACTGCAGAAT
TCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCAAGCA
TTTGAGTGAGCTTTCCTGCCTCAGAAACGCGGACGCGTGGGCGGACGCGTGGGCGG

consensusID : consensus_8708#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 600
fasta sequence

                              [CGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGTTGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACCCCCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGACGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGTCTGTAGCTAAAATTGGAAGGAATTATGGCACCCTTTTCATTAAAGAATTGTAGAATTACGGCTTGACAACTTACACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGTGGGCCGGTTTGTCACCAGTGAATCAAGTTTTGATGGAACGGTAGTGACTTCCGGAAACAAATGCTGCATCGACATCATGCAATCAGGGGTGGTTGATAATATCATAGGAGCGCGTTGCTAGAAATTACTTG]

[+] EMBL BX625244             [CGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGTTGGAACACTTTTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACCCCCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGACGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATGGTACCGTATGTCTGTAGCTAAAATTGGAAGGAATTATGGCACCCTTTTCATTAAAGAATTGTAGAATTACGGCTTGACAACTTACACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGTGGGCCGGTTTGTCACCAGTGAATCAAGTTTTGATGGAACGGTAGTGACTTCCGGAAACAAATGCTGCATCGACATCATGCAATCAGGGGTGGTTGATAATATCATAGGAGCGCGTTGCTAGAAATTACTTG]




>consensus_8708#2
CGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGTTGGAACACTTTT
TCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACCCCCAAAATC
GCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGACGACTA
ATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTACGT
TCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATATG
GTACCGTATGTCTGTAGCTAAAATTGGAAGGAATTATGGCACCCTTTTCATTAAAGAATT
GTAGAATTACGGCTTGACAACTTACACTTCCATGTAGCAGCAGCACTAGCAATACGGAGA
ATGCTTTGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGTGGGCCGGTTTG
TCACCAGTGAATCAAGTTTTGATGGAACGGTAGTGACTTCCGGAAACAAATGCTGCATCG
ACATCATGCAATCAGGGGTGGTTGATAATATCATAGGAGCGCGTTGCTAGAAATTACTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8708#0      CCGGATGCGGAGAGGTTCGATCCCGACCGATTTCTGCCCGAACGTTGCAAGAATAGAATG 60
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      GGCTGTGCCTTTATGCCGTTCAACACAGGGAGTCGCAATTGTATTGGCTCACGGTACGCC 120
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      ATGCAGATTATGAAGATTATTTTGTGCAAGATCATTCGGAGATATGAGCTCCACACC-GA 179
consensus_8708#1      ---------------------------------------AGATATGAGCTCCACCCCCGA 21
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      GCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATA 239
consensus_8708#1      GCTAACTATGGAGCAGATGCAGTTTCGGTTCGATATAGCTCTAAAGCAGGAGCAGGGATA 81
consensus_8708#2      -------------CGGGTAACGTCGCGAAACAATACATTCTCACTGTAG-AGCGACGGAA 46
                                   * * *   **  **   * *** *     *  * ** ***   *  *

consensus_8708#0      CTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAACGAATTATAAATATGTTCCATC 299
consensus_8708#1      CTTAATACGGTTCGAGCGTAGAGTTGAAAGTGATTAAAGGAATTATAAATATGTTCCATC 141
consensus_8708#2      GTTGGAACACTTTTT-CACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCC 105
                       **   **  **    *  **  ***** *   **        *** *           *

consensus_8708#0      AGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTAC-ACTTTCGATAGCGTTGGTTGA 358
consensus_8708#1      AGTTATTCCTTACAACTCTATTTGGCCTTCTTGGTTAC-ACTTTCGATAGCGTTGGTTGA 200
consensus_8708#2      AGT-ACCCCCAAAATCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGT 164
                      *** *  **  * * * *  *    * *** ** **   ** *****   ***     * 

consensus_8708#0      CCT-CGGACATGTCCAACATCATCTCTCTCGCCCGATAGTA-AACGCACGATTCCATTTT 416
consensus_8708#1      CCT-CGGACATGTCCAACATCATCTCTCTCGCCCGATAGTA-AACGCACGATTCCATTTT 258
consensus_8708#2      TCTTCGGAGACGACTAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGT 224
                       ** **** * * * **   **  **  ***   ***  *    **  * *        *

consensus_8708#0      GAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTA 476
consensus_8708#1      GAGCTCGTTAAAGTACATTGAAAGCTCAACATGGAAGTAAATCTCATCCATCTTTGAGTA 318
consensus_8708#2      AAGC--AGTGCGTTACGTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCG 282
                       ***    *    *** **  *   **   *      *  *   **         * *  

consensus_8708#0      AACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGACTGAAAAGAGTTCAAATTGGTGGT 536
consensus_8708#1      AACGTACTCCTGCATTGCTTCCAGAATCGGTTTGGAC----------------------- 355
consensus_8708#2      ATGACCTTGGGAGATATGGTACCGTATGTCTGTAGCTAA--------------------- 321
                      *      *     **    * * * **   * * *                         

consensus_8708#0      AAAATTGTTCAGTTCTGGTGATTTGGTTCAGCTACTAAATATGCATGCTCACCATTTCGT 596
consensus_8708#1      -----------------------------------------------------ATTTCGT 362
consensus_8708#2      -----------------------------------------------------AATTGGA 328
                                                                           * ** * 

consensus_8708#0      AGCAGCT-TGCCATC-TCGTCAT-AAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCT 653
consensus_8708#1      AGCAGCT-TGCCATC-TCGTCAT-AAACCTTCGCATCGTAACCGACGCGCAAAGTGCTCT 419
consensus_8708#2      AGGAATTATGGCACCCTTTTCATTAAAGAATTGTAGAATTACGGCTTGACAACTTACACT 388
                      ** *  * ** ** * *  **** ***   * * *   * ** *     ***  * * **

consensus_8708#0      GGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTG-AGC 712
consensus_8708#1      GGTGACACTCCAAAATCTCTTCCAAAGTGAGCTGAATGTTCCTGTCCGCTAAGCTG-AGC 478
consensus_8708#2      T-CCATGTAGCAGCAGCACTAGCAATACGGA--GAATGCTTTGTGGTGATCCATTGCGGC 445
                          *     **  * * **  ***   *    ***** *       * *    **  **

consensus_8708#0      AATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGG-AAGCACTG-CA 770
consensus_8708#1      AATTGTTTCGCCATTTCAAACGGGCGCTCGGTGTCGTTGCCAACGTGG-AAGCACTG-CA 536
consensus_8708#2      TGGTGCTCTGCTCAACCGTAAAGTGGGCCGGT-TTGTCACCAGTGAATCAAGTTTTGATG 504
                         ** *  **     *  *  *  *  **** * **  ***  *    ***   **   

consensus_8708#0      GAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCA 830
consensus_8708#1      GAATTCGATCCAATCCAATCCACAATTTCTCCACAGCCTTTTTGTTGATGTACTCCGCCA 596
consensus_8708#2      GAACGGTAGTGACTTCCGGAAACAAATGCTGCATCGACATCATGCAATCAGGGGTGGTTG 564
                      ***    *   * * *     **** * ** **  * * *  **            *   

consensus_8708#0      AGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCTTCGATGGGAGCTTCCATTAGCGTTT 890
consensus_8708#1      AGCATTTGAGTGAGCTTTCCTGCCTCAGAAACGCGGACGCGTGGGCGGAC----GCGTGG 652
consensus_8708#2      ATAATATCATAGGAGCGCGTTGC--TAGAAAT---TACTTG------------------- 600
                      *  ** * *  *        ***   *****         *                   

consensus_8708#0      GCGGTATGGCGGACACTTCTTCCGATACGATGTTAATCATGTTCGTCGTTTCATTGAACC 950
consensus_8708#1      GCGG-------------------------------------------------------- 656
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      AATCGTCCAGCTGTTCGGCTAGATCCTCCGCCAAAATATCGGTTTCGTTCGCCAAAAACG 1010
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TCATAAAGCTCTCAACAATCACAAACATATCGTTATTCCCCTCGGATGTGGGAAGTATCA 1070
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TGTCACTGATAGCGTGTTGCCTATCGAGCAAGTTGACTGTCGCCCTTGCAATCGAACTAC 1130
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      GGATTGTTGCATTTACCTGTTCCATTTGATCGAACAGCGCATTCAGCTGTAATGGGGCTG 1190
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      AGAATGTTCCCATAATGTGATCCAGCTCGTCCAACACAACCTGCATGCTGCGTTTCGTCT 1250
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      CATCCAACCGGGATCGGTAATGGGTGGCCGCCTGTTCTACCGCCTCCAACGATGACTCTA 1310
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TCTGACCAAAGTCCTCCAAGGTTATCTGCTGACAGAGCTGTTCCACCAGCAGCAGCAGCG 1370
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      GTCGGGTAACGTCGCGAAACAATACATTCTCACTGTAGAGCGACGGAAGATGGAACACTT 1430
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TTTCACAGTCTTGAATGGTGTTCTCCAGCGTATGATCGATCAGTGCCAGTACTCTCAAAA 1490
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TCGCAGTAATACTTTCCTGATTTTGACGTTCGAATTCGTGAAACGTTCTTCGGAGGCGAC 1550
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TAATCGCACTTCCATCGGAGGATGATTCGGCGTGCAACGGACCCGTAAGCAGTGCGTTAC 1610
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      GTTCCAGTGTCTGTAGCTCGCTGGAGAGCACTTGCTGCAGTGCGATGACCTTGGGAGATA 1670
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TGGTACCGTATGCCTGTAGACTTCCATGTAGCAGCAGCACTAGCAATACGGAGAATGCTT 1730
consensus_8708#1      ------------------------------------------------------------
consensus_8708#2      ------------------------------------------------------------
                                                                                  

consensus_8708#0      TGTGGTGATCCATTGCGGCTGGTGCTCTGCTCAACCGTAAAGTGGCCGGCTTGT 1784
consensus_8708#1      ------------------------------------------------------
consensus_8708#2      ------------------------------------------------------