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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8738#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1027 fasta sequence
[CCGCAAGTACCTGTACATGCTGATGGAAAGCTGCCTGGGCGGGGAGCTGTGGACGATCTTGCGCGATCGTGGCCACTTTGATGATGGCACTACGCGCTTTTACACGGCTTGCGTGGTGGAGGCGTTTGATTATCTGCACTCGCGCAACATAATCTATCGCGATCTGAAGCCGGAGAATCTGCTGCTGGATGTGTCGGGGTACGTGAAGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCAATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTATTCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGAGCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCATCCTGAAGGGTATCGATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCAATCCTGCCCAAGGTACAGAGCGTCGTCGATACGGTCAACTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGCCNGATGATCTGTCCGGATGGGACGATGATNTCTAAGCGAAACGTCGTGTCCCCTCTTGNCTGCTGTGCGCTCTTTGATGAAAGATC-NTTTCGCGCT-AACACTTCCTATAAGAAAGTTTTGCTTCTTCTCTCCCCCGTGCGTCCCGTGCAATAAGGGTACATTTTCGGGCGTTTTTGTTTTCGTTTTTGCTTCATTTTGATGAATGAGAGAGAGAGAGAAAGAGAGCCAGCGATTGAAGTGATTGAACGTTAATACCGTCGGTCGTCTAGCGCTTGGTTGAACGTTTGGTTGTTCCTTTTGGAGTGAATGAGGTGTTTGTGGCGGTGTGACCTTGT]
[+] EMBL BM610214 [CCGCAAGTACCTGTACATGCTGATGGAAAGCTGCCTGGGCGGGGAGCTGTGGACGATCTTGCGCGATCGTGGCCACTTTGATGATGGCACTACGCGCTTTTACACGGCTTGCGTGGTGGAGGCGTTTGATTATCTGCACTCGCGCAACATAATCTATCGCGATCTGAAGCCGGAGAATCTGCTGCTGGATGTGTCGGGGTACGTGAAGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCAATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTATTCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGAGCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCATCCTGAAGGGTATCGATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCAATCCTGCCCAAGGTACAGAGCGTCGTCGATA ]
[+] EMBL BX625790 [ CGCGCTTTTACNCGGNTTGCGTGGTGGAGGCGTTCGATTATCTGCACTCGCGCAACATTATCTATCGCGATCTGAAGCCGGAGAATCTGCTGCTGGATGTGTCGGGGTACGTGAAGCTGGTGGACTTTGGATTCGCTAANAAGCTGCAATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGANTACGTAGCGCCGGAAGTTATTCTTAACCGTGGCCATGACATCANTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGAGCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCATCCTGAAGGGTATCGATGCGATCGAGTTCCCGCGCANCATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAANAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCGATCCTACCGAAAGTACAGAGCGTCNTCGATACGGTCAACTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGCCNGATGATCTGTCCGGATGGGACGATGATNTCTAAGCGAAACGTCGTGTCCCCTCTTGNCTGCTGTGCGCTCTTTGATGAAAGATC NTTTCGCGCT AACACTTCCTATAAGAAAGTTTTGCTT ]
[+] EMBL BM623124 [ cCGGCTTGCGTGGTGGAGGCGTTTGATTATCTGCACTCGCGCAACATAATCTATCGCGATCTGAAGCCGGAGAATCTGCTGCTGGATGTGTCGGGGTACGTGATGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCAATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTATTCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGAGCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCATCCTGAAGGGTATCGATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTC ]
[+] EMBL BX605325 [ CTGCTGTGCGCTCTTTGATGAAAGATCTTTTTCGCGCTAAACACTTCCTATAAGAAAGTTTTGCTTCTTCTCTCCCCCGTGCGTCCCGTGCAATAAGGGTACATTTTCGGGCGTTTTTGTTTTCGTTTTTGCTTCATTTTGATGAATGAGAGAGAGAGAGAAAGAGAGCCAGCGATTGAAGTGATTGAACGTTAATACCGTCGGTCGTCTAGCGCTTGGTTGAACGTTTGGTTGTTCCTTTTGGAGTGAATGAGGTGTTTGTGGCGGTGTGACCTTGT]
consensusID : consensus_8738#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 731 fasta sequence
[CGACCCACGCGTCCGGTGTTTGTGGCGGTGTGACCTTGTGCACGGGGACGGTGTAGCGTTTTTATACATATATTTTAAAAAGTTTTATCATTTTTTTTAATCAGAAAACAAGAAAAAAAGGTGCAGACACAGAAAGGCAGT-CAATTGCAGAGTGTACTTTTGT-TTTTAAATGGAAAAG-AAGAGAAAGTGTCCTTAAACAATTAGTTATACGTTTAACAAATAATAGC-----AAAAAAATACAAGAATTAGAGGATTGAGCACAGCATCGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAAAGCAGAGAA-AAAATGTTGATTATGATTGTGTACTGCTTTTGTACTTCCC-------TCTTCTTTGATAT-CTGTTTTCCATCCTGAATGATCCTTTCTCGTTAGAGATCACGTGCAACGACCATCGTACCACGTGGTATGCCTTAGCTAACAAAAAAGCCCCAATTTTTAATGCTAACAC----CTCTCTCTCTACACCCCGTTACTTCAGCTAATTGTTGGTCAGAATTTAAACACCCCGATAATAACCCCGATAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAG-CGAGAACAGGAGAGAGAGAAAGAGAAACGAATGTATGTTTGTATGTGTGTGTGTTGCGTGCGTGCGTGTATGTTGTTCAATTTGTGCAATCGAGATTCTGTAAAATATACGTGCTCAAAAAAGCGAAGTCTGTACATAACAAAAA]
[+] EMBL BM638456 [CGACCCACGCGTCCGGTGTTTGTGGCGGTGTGACCTTGTGCACGGGGACGGTGTAGCGTTTTTATACATATATTTTAAAAAGTTTTATCATTTTTTTTAATCAGAAAACAAGAAAAAAAGGTGCAGACACAGAAAGGCAGT CTATTGCAGAGTGTACTT T TTTT AATGGAAAAG AAGAGAAAGTGTCCTTAAACAATTAGTTATACGTTTAACAAATAATAGCAAAAAAAAAAAATACAAGAATTAGAGGATTGAGCACAGCATCGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAAAGGAGAGAAGAAACTGTTGATTATGATTGTGTACTGC TTTATACTTCCCTGTTTTTTCTTCTTTGATATCCTTTTTTCCATCCTGAATGATCCTTTCTCGTTAGAGATCACGTGCAACGACCATCGTACCACGTGGTATGCCTTAGCTAACAAAAAAGCCCCAATTTTTAATGCTAACACCTCTCTCTCTCTCTACACCCCGTTACTTCAGCTAATTGTTGGTCAGAATTTAAACACCCCGATAATAACCCCGATAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAG CGAGAACAGGAGAGAGAGA ]
[+] EMBL BX619606 [ GTGCACACACAGAAAGGCAGTNCAATTGCAGAGTGTACTTTTGTNTTTTAAATGGAAAAGTAAGAGAAAGTGTCCTTAAACAATTAGTTATACGTATAACAAATAATAGC AAAAAAATACAAGAATTAGAGGATTGAGCACAGCATCGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAAAGCAGAGAA AAAATGTTGATTATGATTGTGTACTGCTTTTGTACTTCCC TCTTCTTTGATAT CTGTTTACCATCCTGAATGATCCTTTCTCGTTAGAGATCACGTGCAACGACCATCGTACCACGTGGTATGCCTTAGCTAACAAAAAAGCCCCAATTTTTAATGCTAACAC CTCTCTCTCTACACCCCGTCACTTCAGCTAATTGTTGGTCAGAATTTAAACACCCCGATAATAACCCCGATAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAGCCGAGAACAGGA ]
[+] EMBL AGA282036 [ ACAGAAAGGCAGT CAATTGCAGAGTGTACTTTTGT TTTTAAATGGAAAAG AAGAGAAAGTGTCCTTAAACAATTAGTTATACGTTTAACAAATAATAGC AAAAAAATACAAGAATTAGAGGATTGAGCACAGCATCGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAAAGCAGAGAA AAAATGTTGATTATGATTGTGTACTGCTTTTGTACTTCCC TCTTCTTTGATAT CTGTTTTCCATCCTGAATGATCCTTTCTCGTTAGAGATCACGTGCAACGACCATCGTACCACGTGGTATGCCTTAGCTAACAAAAAAGCCCCAATTTTTAATGCTAACAC CTCTCTCTCTACACCCCGTTACTTCAGCTAATTGTTGGTCAGAATTTAAACACCCCGATAATAACCCCGAT ]
[-] EMBL AGA280337 [ TGTTGATTATGATTGTGTACTGCTTTTGTACTTCCC TCTTCTTTGATAT CTGTTTACCATCCTGAATGATCCTTTCTCGTTAGAGATCACGTGCAACGACCATCGTACCACGTGGTATGCCTTAGCTAACAAAAAAGCCCCAATTTTTAATGCTAACAC CTCTCTCTCTACACCCCGTTACTTCAGCTAATTGTTGGTCAGAATTTAAACACCCCGATAATAACCCCGATAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAG CGAGAACAGGAGAGAGAGAAAGAGAAACGAATGTATGTTTGTATGTGTGTGTGTTGCGTGCGTGCGTGTATGTTGTTCAATTTGTGCAATCGAGATTCTGTAAAATATACGTGCTCAAAAAAGCGAAGTCTGTACATAACAAAAA]
consensusID : consensus_8738#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 701 fasta sequence
[GAATCGCCCCGTATNATCATCCTGAAGGGTATCTGATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCGATCCTACCTGAAAGTACAGAGCGTCGTCGATACTGGCCAACTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGCCGGATGATCTGTCCGGATGGGACGATGATTTCTAAGCGAAACGTCGTGTCCCCTCTTGCCTGCTGTGCGCTCTTTGATGAAAGATCTTTTCGCGCTAAACACTTCCTATAAGAAAGTTTTGCTTCTTCTCTCCCCCGGTGCCTCCCGTGCAATAAGGTTACATTTTCGTGCGTTATTATTGTTTCATTTTGATGAATGAAAGAGAGAGAGAGAGANGAGAGAGAGTGAGAAAGAGAGCCAGCGATTGAAGTTTTGANACGTTAATACCGTCTGTCGATCTGGCGCTTGGTTGAACGTAATGGTATTGTACCCTCTTCNTGGAGGTGAATTGACGCGTNGTAACTTGTAGTGCANGTNGATGGCCCCTTGCTGGCCACCGGGANNNAACAGGTGTTAAACCGTCTCT]
[+] EMBL AL931617 [GAATCGCCCCGTATNATCATCCTGAAGGGTATCTGATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCGATCCTACCTGAAAGTACAGAGCGTCGTCGATACTGGCCAACTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGCCGGATGATCTGTCCGGATGGGACGATGATTTCTAAGCGAAACGTCGTGTCCCCTCTTGCCTGCTGTGCGCTCTTTGATGAAAGATCTTTTCGCGCTAAACACTTCCTATAAGAAAGTTTTGCTTCTTCTCTCCCCCGGTGCCTCCCGTGCAATAAGGTTACATTTTCGTGCGTTATTATTGTTTCATTTTGATGAATGAAAGAGAGAGAGAGAGANGAGAGAGAGTGAGAAAGAGAGCCAGCGATTGAAGTTTTGANACGTTAATACCGTCTGTCGATCTGGCGCTTGGTTGAACGTAATGGTATTGTACCCTCTTCNTGGAGGTGAATTGACGCGTNGTAACTTGTAGTGCANGTNGATGGCCCCTTGCTGGCCACCGGGANNNAACAGGTGTTAAACCGTCTCT]
consensusID : consensus_8738#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence
[AGGCAAGAATCGGCACGNNGGAAGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCAATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTATTCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGAGCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCATCCTGAAGGGTATCGATGCGATCGAGTTCTCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCGATCCTACCGAAAGTACAGAGCGTCGTCGATACGGGCAACTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGGCGGATGATCTGTGCCGGATGGGACGATGATTTCTAAGCGAAACGTCGTGTCCCCGTCTTGCCTGGCTGTGCGCTCTTTGATGAAAGATCTTTTTCGCGCTAAACACTTCCTATAAGAAAGTTTGNTTCTTCGTCTCCCCCGTGGCTCCCGTGCAATAAGGGT]
[+] EMBL BX468402 [AGGCAAGAATCGGCACGNNGGAAGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCAATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTATTCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGAGCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCATCCTGAAGGGTATCGATGCGATCGAGTTCTCGCGCAACATCACCCGCAATGCCAGTGCGCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGGCATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAATCGTTCACTGCCGCCGCCGATCCTACCGAAAGTACAGAGCGTCGTCGATACGGGCAACTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGGCGGATGATCTGTGCCGGATGGGACGATGATTTCTAAGCGAAACGTCGTGTCCCCGTCTTGCCTGGCTGTGCGCTCTTTGATGAAAGATCTTTTTCGCGCTAAACACTTCCTATAAGAAAGTTTGNTTCTTCGTCTCCCCCGTGGCTCCCGTGCAATAAGGGT]
consensusID : consensus_8738#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 604 fasta sequence
[CGAGCAGAATCGCACGAGGCTTAGATTGAAGTTGAACGTTAATACCGTCTGTCGGTCTAGCGCTTGGTTGAACGTTTGGTTGTTCCTTTTGGAGTGAATGAGGTGTTTGTGGCGGTGTGACCTTGTGCACGGGGACGGGTGTACGTTTTTATACATATATTTTAAAAAGTTTTATCATTTTTTTTAATCAGAAAACAAGAAAAAAAGGTGCAGACACAGAAAGGCAGTCTATTGCAGAGTGTACTTTTTTTAATGGAAAAGAAGAGAAAGTGTCCTTAAGACAATTAGTTATACGTTTAACAAATAATAGCAAAAAAAAATACAAGAATTAGAGGATTGAGCACAGCATCGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAATGGAAGAGAAGAAAATGTTGATTATGAGTTGTGTACTGCTTTTGTATTTCCCTCTTCTTTGATATCCTTTTTTCCATCCTGAATGATCCTTTCTCGTTGAGAGATCACGTGCGAACGACCATCGTACCACGGTGGGTATGCCTTAGGCTAGACAAAAAAGCCCCCNATTTTTAATGCGTAACACCTCTCTCGTCTAAACCCGGTTAACTTCAGNTAAT]
[+] EMBL BX469718 [CGAGCAGAATCGCACGAGGCTTAGATTGAAGTTGAACGTTAATACCGTCTGTCGGTCTAGCGCTTGGTTGAACGTTTGGTTGTTCCTTTTGGAGTGAATGAGGTGTTTGTGGCGGTGTGACCTTGTGCACGGGGACGGGTGTACGTTTTTATACATATATTTTAAAAAGTTTTATCATTTTTTTTAATCAGAAAACAAGAAAAAAAGGTGCAGACACAGAAAGGCAGTCTATTGCAGAGTGTACTTTTTTTAATGGAAAAGAAGAGAAAGTGTCCTTAAGACAATTAGTTATACGTTTAACAAATAATAGCAAAAAAAAATACAAGAATTAGAGGATTGAGCACAGCATCGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAATGGAAGAGAAGAAAATGTTGATTATGAGTTGTGTACTGCTTTTGTATTTCCCTCTTCTTTGATATCCTTTTTTCCATCCTGAATGATCCTTTCTCGTTGAGAGATCACGTGCGAACGACCATCGTACCACGGTGGGTATGCCTTAGGCTAGACAAAAAAGCCCCCNATTTTTAATGCGTAACACCTCTCTCGTCTAAACCCGGTTAACTTCAGNTAAT]
consensusID : consensus_8738#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence
[GTACCACGTGGTATGCCTTAGCTAACAAAGAAGCCCCAATTTTTAATGCTAACACCTCTCTCTCTACACCCCGTTACTTCAGCTAATTGTTGGTCAAAATTTAAACACCCCGATAATAACCCCGATAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAGCGAGAACATGAGAGAGAGAAAGAAGAATGCGTACAGCGGTACAAGATGAACAAAGCCATAAAGAATGAAAGTCACTAACCGAAGCATAGAGTCCAATTGTTGATGAAAATTGGAAGAAAAGGTAACATGTCATGTTTTGATTCAAGCACTCTCAACATTCCGATCGGAATAGAGCATTTGGTTTATGGTTGTTTGATTGATTTGTGTTTGATAGTTTATTTGCATGATCTGTTACTATCATTTCCTTACATGCCATACAGTCTTAATAACTT]
[+] EMBL BX611740 [GTACCACGTGGTATGCCTTAGCTAACAAAGAAGCCCCAATTTTTAATGCTAACACCTCTCTCTCTACACCCCGTTACTTCAGCTAATTGTTGGTCAAAATTTAAACACCCCGATAATAACCCCGATAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAGCGAGAACATGAGAGAGAGAAAGAAGAATGCGTACAGCGGTACAAGATGAACAAAGCCATAAAGAATGAAAGTCACTAACCGAAGCATAGAGTCCAATTGTTGATGAAAATTGGAAGAAAAGGTAACATGTCATGTTTTGATTCAAGCACTCTCAACATTCCGATCGGAATAGAGCATTTGGTTTATGGTTGTTTGATTGATTTGTGTTTGATAGTTTATTTGCATGATCTGTTACTATCATTTCCTTACATGCCATACAGTCTTAATAACTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8738#0 CCGCAAGTACCTGTACATGCTGATGGAAAGCTGCCTGGGCGGGGAGCTGTGGACGATCTT 60
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 ------------------------------------------------------------
consensus_8738#1 ------------------------------------------------------------
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 GCGCGATCGTGGCCACTTTGATGATGGCACTACGCGCTTTTACACGGCTTGCGTGGTGGA 120
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 ------------------------------------------------------------
consensus_8738#1 ------------------------------------------------------------
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 GGCGTTTGATTATCTGCACTCGCGCAACATAATCTATCGCGATCTGAAGCCGGAGAATCT 180
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 ------------------------------------------------------------
consensus_8738#1 ------------------------------------------------------------
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 GCTGCTGGATGTGTCGGGGTACGTGAAGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCA 240
consensus_8738#3 ----AGGCAAGAATCGGCACGNNGGAAGCTGGTGGACTTTGGATTCGCTAAGAAGCTGCA 56
consensus_8738#2 ------------------------------------------------------------
consensus_8738#1 ------------------------------------------------------------
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 ATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTAT 300
consensus_8738#3 ATCAGGTCGCAAAACATGGACGTTCTGCGGTACGCCGGAGTACGTAGCGCCGGAAGTTAT 116
consensus_8738#2 ------------------------------------------------------------
consensus_8738#1 ------------------------------------------------------------
consensus_8738#4 -----------------------------------------------------CGAGCAG 7
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 TCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGA 360
consensus_8738#3 TCTTAACCGTGGCCATGACATCAGTGCCGACTATTGGTCGCTTGGAGTGCTCATGTTTGA 176
consensus_8738#2 ------------------------------------------------------------
consensus_8738#1 ------------------------------------------------------------
consensus_8738#4 AATCGCACGAGGCTTAGATTGAAGTTGAACGTTAATACCGTCTGTCGGTCTAGCGCTTGG 67
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 GCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCAT 420
consensus_8738#3 GCTGCTGACCGGTACGCCACCGTTCACTGGAGCCGATCCGATGCGCACGTACAACATCAT 236
consensus_8738#2 ---------------------------------------GAATCGC-CCCGTATNATCAT 20
consensus_8738#1 --------------------CGACCCACGCGTCCGGTGTTTGTGGC-GGTGTGACCTTGT 39
consensus_8738#4 TTGAACGTTTGGTTGTTCCTTTTGGAGTGAATGAGGTGTTTGTGGC-GGTGTGACCTTGT 126
consensus_8738#5 -------------------------------------GTACCACGT-GGTATGCCTTAGC 22
* *
consensus_8738#0 CCTGAAGGGTATC--GATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGC- 477
consensus_8738#3 CCTGAAGGGTATC--GATGCGATCGAGTTCTCGCGCAACATCACCCGCAATGCCAGTGC- 293
consensus_8738#2 CCTGAAGGGTATCT-GATGCGATCGAGTTCCCGCGCAACATCACCCGCAATGCCAGTGC- 78
consensus_8738#1 GCACGGGGACGGTGTAGCGTTTTTAT----ACATATATTTTAAAAAGTTTTATCATTTTT 95
consensus_8738#4 GCACGGGGACGGGTGTACGTTTTTAT----ACATATATTTTAAAAAGTTTTATCATTTTT 182
consensus_8738#5 TAACAAAGAAGCCCCAAT-TTTTAATGCTAACACCTCTCTCTCTACACCCCGTTACTTCA 81
* * * * *
consensus_8738#0 GCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGG 537
consensus_8738#3 GCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGG 353
consensus_8738#2 GCTGATCAAGAAGCTGTGCCGGGACAATCCGACCGAGCGTCTCGGCTACCAGCGAGGCGG 138
consensus_8738#1 TTTAATCAGAAAACAAGAAAAAAAGGTGCAGACACAGAAAGGCAGT--CAATTGCAG-AG 152
consensus_8738#4 TTTAATCAGAAAACAAGAAAAAAAGGTGCAGACACAGAAAGGCAGT--CTATTGCAG-AG 239
consensus_8738#5 GCTAATTGTTGGTCAAAATTTAAACACCCCGATA-ATAACCCCGATAATAGTTGTTG-GA 139
* ** * * * ** * * * *
consensus_8738#0 CATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAA 597
consensus_8738#3 CATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAA 413
consensus_8738#2 CATCAGTGAAATCCAAAAGCACAAATGGTTCGATGGCTTCTACTGGGAAGGATTGCGGAA 198
consensus_8738#1 TG-TACTTTTGTTTTTAAATGGAAAAGAAGAGAAAGTGTC--CTTAA-ACAATTAGTTAT 208
consensus_8738#4 TG-TACTTTTTTT----AATGGAAAAGAAGAGAAAGTGTC--CTTAAGACAATTAGTTAT 292
consensus_8738#5 CGCTAATTGATAATGATAACGTTTGGTTAGCGAGAACATG--AGAGAGAGAAAGAAGAAT 197
* * * ** * * * *
consensus_8738#0 TCGTTCA-CTGCCGCCGCCAATCCTGCC-CAAGGTACAGAGCGTCGTCGATAC-GGTCAA 654
consensus_8738#3 TCGTTCA-CTGCCGCCGCCGATCCTACC-GAAAGTACAGAGCGTCGTCGATAC-GGGCAA 470
consensus_8738#2 TCGTTCA-CTGCCGCCGCCGATCCTACCTGAAAGTACAGAGCGTCGTCGATACTGGCCAA 257
consensus_8738#1 ACGTTTAACAAATAATAGCAAAAAAA--TACAAGAATTAGAGG--ATTGA-GCACAGCAT 263
consensus_8738#4 ACGTTTAACAAATAATAGCAAAAAAAAATACAAGAATTAGAGG--ATTGA-GCACAGCAT 349
consensus_8738#5 GCGTACAGCGGTACAAGATGAACAAAGCCATAAAGAATGAAAGTCACTAA-CCGAAGCAT 256
*** * * * * * * * * **
consensus_8738#0 CTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGCCNGATGATCTGT-CCGGATGGG 713
consensus_8738#3 CTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGGCGGATGATCTGTGCCGGATGGG 530
consensus_8738#2 CTTTGATGACTATCCGGCCGATCCGGATGGTCCTCCGCCGGATGATCTGT-CCGGATGGG 316
consensus_8738#1 CGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAA-AGCAGAGAA-AA--AATGTTG- 318
consensus_8738#4 CGTCCATGTCATATGTGTGAGGTGAGAGGGTCGGAAATGGAAGAGAAGAA--AATGTTG- 406
consensus_8738#5 AGA----GTCCAATTGTTGA----TGAAAATTGGAAG----AAAAGGTAA--CATGTCAT 302
* * ** * * *
consensus_8738#0 ACGATGATNTCTAAGCGAAACGTCGTGTCCCC-TCTTGNCTG-CTGTGCGCTCTTTGA-- 769
consensus_8738#3 ACGATGATTTCTAAGCGAAACGTCGTGTCCCCGTCTTGCCTGGCTGTGCGCTCTTTGA-- 588
consensus_8738#2 ACGATGATTTCTAAGCGAAACGTCGTGTCCCC-TCTTGCCTG-CTGTGCGCTCTTTGA-- 372
consensus_8738#1 ATTATGA-TTGTGTACTGC-TTTTGTACTTCCCTCTTCTTTGATATC-TGTTTTCCATCC 375
consensus_8738#4 ATTATGAGTTGTGTACTGC-TTTTGTATTTCCCTCTTCTTTGATATCCTTTTTTCCATCC 465
consensus_8738#5 GTTTTGATTCAAGCACT---CTCAACATTCCGATCGGAATAGAGCATTTGGTTTATGGT- 358
*** * * ** * * *
consensus_8738#0 TGAAAGATCNTTT-CGCGCTAA-CACTTCCTATAAGAAAGTTTTGCTTCTTCTCTCCCCC 827
consensus_8738#3 TGAAAGATCTTTTTCGCGCTAAACACTTCCTATAAGAAAGTTTGNTTCTTCGTCTCCCCC 648
consensus_8738#2 TGAAAGATCTTTT-CGCGCTAAACACTTCCTATAAGAAAGTTTTGCTTCTTCTCTCCCCC 431
consensus_8738#1 TGAATGATCCTTT-CTCGTT--AGAGATCACGTGC-AACGACCATCGTACCACGT--GGT 429
consensus_8738#4 TGAATGATCCTTT-CTCGTTG-AGAGATCACGTGCGAACGACCATCGTACCACGGTGGGT 523
consensus_8738#5 TGTTTGATTGATT-TGTGTTTGATAGTTTATTTGC--ATGATC-TGTTACTATCAT---- 410
** *** ** * * * * * * *
consensus_8738#0 G-TGCGTCC---CGTGCAATAAGGGTACATTTTCGGGCGTTTTTGTTTTCGTTTTTGCTT 883
consensus_8738#3 G-TGGCTCC---CGTGCAATAAGGGT---------------------------------- 670
consensus_8738#2 GGTGCCTCC---CGTGCAATAAGGTTACATTTTCGTGCGTTATTATTGTTTCATTTTGAT 488
consensus_8738#1 A-TGCCTTAG-CTA-ACAAAAAAGCCCC-AATTTTTAATGC-TAACACCTCTCTC-TCTA 483
consensus_8738#4 A-TGCCTTAGGCTAGACAAAAAAGCCCCCNATTTTTAATGCGTAACACCTCTCTCGTCTA 582
consensus_8738#5 --TTCCTTA---CATGCCATACAGTCTTAATAACTT------------------------ 441
* * * * * *
consensus_8738#0 CATTTT----------GATGAATGAGAGAGAGAGAGAAAGAGAGCCAGCGATTGAAGTGA 933
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 GAATGAAAGAGAGAGAGAGAGANGAGAGAGAGTGAGAAAGAGAGCCAGCGATTGAAGTTT 548
consensus_8738#1 CACCCCGTTA-CTTCAGCTAATTGTTGGTCAGAATTTAAACACCCCGATAATAACCCCGA 542
consensus_8738#4 AACCCGGTTAACTTCAGNTAAT-------------------------------------- 604
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 TTGAACGTTAATACCGTCGGTCG-TCTAGCGCTTGGTTGAACGTTTGGTTGTTCCTTTTG 992
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 TGANACGTTAATACCGTCTGTCGATCTGGCGCTTGGTTGAACGTAATGGTATTGTACCCT 608
consensus_8738#1 TAATAGTTGTTGGACGCTAATTGATAATGATAACGTTTGGTTAGCGAGAACAGGAGAGAG 602
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 GAGTGAATGAGGTGTTTGTGGCGGTGTGACCTTGT------------------------- 1027
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 CTTCNTGGAGGTGAATTGACGCGTNGTAACTTGTAGTGCANGTNGATGGCCCCTTGCTGG 668
consensus_8738#1 AGAAAGAGAAACGAATGTATGTTTGTATGTGTGTGTGTTGCGTGCGTGCGTGTATGTTGT 662
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 ------------------------------------------------------------
consensus_8738#3 ------------------------------------------------------------
consensus_8738#2 CCACCGGGANNNAACAGGTGTTAAACCGTCTCT--------------------------- 701
consensus_8738#1 TCAATTTGTGCAATCGAGATTCTGTAAAATATACGTGCTCAAAAAAGCGAAGTCTGTACA 722
consensus_8738#4 ------------------------------------------------------------
consensus_8738#5 ------------------------------------------------------------
consensus_8738#0 ---------
consensus_8738#3 ---------
consensus_8738#2 ---------
consensus_8738#1 TAACAAAAA 731
consensus_8738#4 ---------
consensus_8738#5 ---------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||