cluster # 8743

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8743 cluster # 8743 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8743#0 length = 1438 sequences # 7

consensus_8743#1 length = 643 sequences # 4
consensus_8743#2 length = 307 sequences # 1

consensusID : consensus_8743#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1438
fasta sequence

                              [TTGTTGTTCATTATGCTACGTATTGTTGTGTAGTATGCCATGCTTTTGCTTTTCTCTAGCATTCAGTTTTGGGGAACGATCGAGCGGGAGGCTTTTTCCTTGTTTAGTAGATTTTGGTTTGTTTCCTCTCTATTGTAACGCGTTTGTTGTGGTTGGTTTTTGTTTCATTAATTATAAATAATAAAAAAAAATCATAACGATTGGCAAACGGCAAATGTCGACAGAACGCTTCGCTGCGGCATATTCCAGCAATGGCAGTCTCTACTACGGGCCAAACGCAAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTACGACGAGGAGCACGAATGGGTGGCCCATGTCATTTGTTTTTGTTCCTTCGTTTTGCTAAGTGTTTATTAGACGAAAGGTTTTCTCTATACTATCCTTTTACGATTTAGCCACTAGAGACTGTAACGGCTTCGGTGTGTTTGTGTGTGTTTTTAAGGGAGAGAAAGGGACTTAATCTTCGTTTTTTATAATCACTATAAGCGCAACGTAAGCTATCGCACTAATCCGCCTTCACTCTCTGTCCCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCATCGACCAAATG-AAGCCGTCGGAGATGTTTAAATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCGCGATTTTTAAGCTATCTAAACAAGGTGCATTATCGCCCGTTCCTGTAGTTCCTCTGAT-CGTGTGCTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAAAGTGGAAATGGTGTG-C--ACGCGTTGCCGCTTC----TTTTTTTGTTTAATCCGCCGTTAACTTCTATTCCCTTGTGTATGCTTCATTTACTTTCAGTTCCAGTTGTTTGGGTGAATTTCCGTGCATTTTCCTTTCCTATTAGATTGCCATTAGGGCTTTTTCTTTGCATTTTGGGTTTCTGCGCTTCTTGCTGCTGCTGTGCTGCTTGTGTTTGCTTGTTCGTGGCATTTCCCGTTGTCCTCTCTCTTTAATTATAGTTAAAGTCTATATAATAGCGCCCACCAATCGTAAGAATAATTAAATAAACGCAACATGTAAGCGG]

[-] EMBL BM652244             [TTGTTGTTCATTATGCTACGTATTGTTGTGTAGTATGCCATGCTTTTGCTTTTCTCTAGCATTCAGTTTTGGGGAACGATCGAGCGGGAGGCTTTTTCCTTGTTTAGTAGATTTTGGTTTGTTTCCTCTCTATTGTAACGCGTTTGTTGTGGTTGGTTTTTGTTTCATTAATTATAAATAATAAAAAAAAATCATAACGATTGGCAAACGGCAAATGTCGACAGAACGCTTCGCTGCGGCATATTCCAGCAATGGCAGTCTCTACTACGGGCCAAACGCAAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTACGACGAGGAGCACGAATGGGTGGCCCATGTCATTTGTTTTTGTTCCTTCGTTTTGCTAAGTGTTTATTAGACGAAAGGTTTTCTCTATACTATCCTTTTACGATTTAGCCACTAGAGACTGTAACGGCTTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08MY4             [                                                                                                                                                                                                                                                                                                                                                                                                           TTCTCTATACTATCCTTTTACGATTTAGCCACTAGAGACTGTAACGGCTTGAGTGTGTTTGTGTGTGTTTTTAAGGGAGAGAAAGGGACTTAATCTTCGTTTTTTATAATCACTATAAGCGCAACGTAAGCTATCGCACTAATCCGCCTTCACTCTCTGTCCCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCATCGACCAAATG AAGCCGTCGGAGATGTTTAAATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTTCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCGCGATTTTTAAGCTATCTAAACAAGGTGCATCATCGCCCGTTCCTGTAGTTCCTCTGAT CGTGTGCTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAAAGTGGAAATGGTGTG C  ACGCGTTGCCGCTTC    TTTTTTTGTTTAATCCGCCGTTAACTTCTATTCCCTTGTGTATGCTTCATTTACTTTCAGTTCCAGTTGTTTGGGTGAATTTCCGTGCATTTTCCTTTCCTATTAGATTGCCATTAGGGCTTTTTCTTTGCATTTTGGGTTTCTGCGCTTCTTGCTGCTGCTGTCCTGCTTGTGTTTGCTTGTTCGTGGCA                                                                                               ]
[-] EMBL BX604956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gaaGGAGAGAAAGGGACTTAATCTTCGTTTTTTATAATCACTATAAGCGCAACGTAAGCTATCGCACTAATCCGCCTTCACTCTCTGTCCCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCATCGACCAAATG AAGCCGTCGGAGATGTTTAAATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGATTTTCCGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BX621431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACTATAAGCGCATCGTAAGCTATCGCAATAATCCGCCTTCACTCTCNGTCCCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCATCGACCAAATG AAGCCGTCGGAGATGTNTAAATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGCTTTTCNGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCGCGATTTTTAAGCTATCTAAACAAGGTGCATTATCGCCCGTTCCTGTAGTTCCTCTGATCCGTGTGCTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTNTACACTAAATCGAAAGGTTGCGTAAAAGTGGAAATGGT                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08MY3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCTTCACTCTCTGTCCCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCATCGACCAAATG AAGCCGTCGGAGATGTTTAAATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCGCGATTTTTAAGCTATCTAAACAAGGTGCATCATCGCCCGTTCCTGTAGTTCCTCTGAT CGTGT CTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAAAGTGGAAATGGTGTG CAAACGCGTTGCCGCTTC    TTTTTTTGTTTAATCCGCCGTTAACTTCTATTCCCTTGTGTATGCTTCATTTACTTTCAGTTCCAGTTGTTTGGGTGAATTTCCGTGCATTTTCCTTTCCTATTAGATTGCCATTAGGGCTTTTTCTTTGCATTTTGGGTTTCTGCGCTTCTTGCTGCTGCTGTGCTGCTTGTGTTTGCTTGTTCGTGGCATTTCCCGTTGTCCTCTCTCTTTAATTATAGTTAAAGTCTATATAATAGCGC                                            ]
[-] EMBL BM576909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCATCGACCAAATGAAAGCCGTCGGAGATGTTTAAATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCGCGATTTTTAAGCTATCTAAACAAGGTGCATTATCGCCCGTTCCTGTAGTTCCTCTGAT CGTGTGCTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAAAGTGGAAATGGTGTG CA ACGCGTTGCCGCTTC    TTTTTTTGTTTAATCCGCCGg                                                                                                                                                                                                                                                                         ]
[-] EMBL BM639727             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAAGGTGCATTATCGCCCGTTCCTGTAGTTCCTCTGAT CGTGTGCTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTCTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTGTACACTAAATCGAAAGGTTGCGTAAGAGTGGAAATGGTGTGTA  ACGCGTTGCCGCTTCTTTTTTTTTTTGTTTAATCCGCCGTCAACTTCTATTCCCTAGTGTATGCTTCATTTACTTTCAGTTCCAGTTGTTTGGGTGTATTTCCGTGCATTTTCTTTTCCTATTAGATTGCCATTAGGGCTTTTTCTTTGCATTTTGGGTTTCTGCGCTTCTTGCTGCTGCTGTGCTGCTTGTGTTTGCTTGTTCGTGGCATTTCCCGTTGTCCTCTATCTTTAATTATAGTTAAAGTCTATATAATAGCGCCCACCAATCGTAAGAATAATTAAATAAACGCAACATGTAAGCGG]




>consensus_8743#0
TTGTTGTTCATTATGCTACGTATTGTTGTGTAGTATGCCATGCTTTTGCTTTTCTCTAGC
ATTCAGTTTTGGGGAACGATCGAGCGGGAGGCTTTTTCCTTGTTTAGTAGATTTTGGTTT
GTTTCCTCTCTATTGTAACGCGTTTGTTGTGGTTGGTTTTTGTTTCATTAATTATAAATA
ATAAAAAAAAATCATAACGATTGGCAAACGGCAAATGTCGACAGAACGCTTCGCTGCGGC
ATATTCCAGCAATGGCAGTCTCTACTACGGGCCAAACGCAAGCGTGTGTGTGTGTGTGTG
TGTGTGTGTGTAGTACGACGAGGAGCACGAATGGGTGGCCCATGTCATTTGTTTTTGTTC
CTTCGTTTTGCTAAGTGTTTATTAGACGAAAGGTTTTCTCTATACTATCCTTTTACGATT
TAGCCACTAGAGACTGTAACGGCTTCGGTGTGTTTGTGTGTGTTTTTAAGGGAGAGAAAG
GGACTTAATCTTCGTTTTTTATAATCACTATAAGCGCAACGTAAGCTATCGCACTAATCC
GCCTTCACTCTCTGTCCCTGGCGCGTTCCATTGTGTTCAAGAAATTGTGCCTTTTCCCAT
CGACCAAATGAAGCCGTCGGAGATGTTTAAATTTTGTTAACGCTCAAGCAGCAATTGGCG
CACGTGGTTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGTGGCGTATGCACTTG
CAGCGGGCGCAAGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACGTGAGT
TAAGAGTGTGTGTTTGTGTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTC
TTGCCTCTCGAGTTATTCTATCGTGTGCTTTTTTACCGAATCGAGCCTATTTCCTCCCCC
GACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCGCGAT
TTTTAAGCTATCTAAACAAGGTGCATTATCGCCCGTTCCTGTAGTTCCTCTGATCGTGTG
CTCCGCTATTTCGTCTGCTTTCGGGTTTTCTCTTTCATATCATCACATTCTACACAAGGC
CAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAAAGTGGAAATGGTGTGCACG
CGTTGCCGCTTCTTTTTTTGTTTAATCCGCCGTTAACTTCTATTCCCTTGTGTATGCTTC
ATTTACTTTCAGTTCCAGTTGTTTGGGTGAATTTCCGTGCATTTTCCTTTCCTATTAGAT
TGCCATTAGGGCTTTTTCTTTGCATTTTGGGTTTCTGCGCTTCTTGCTGCTGCTGTGCTG
CTTGTGTTTGCTTGTTCGTGGCATTTCCCGTTGTCCTCTCTCTTTAATTATAGTTAAAGT
CTATATAATAGCGCCCACCAATCGTAAGAATAATTAAATAAACGCAACATGTAAGCGG

consensusID : consensus_8743#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 643
fasta sequence

                              [AGATGTTTAAATTTTGTTAACGCTCAAGCAGCGCGCGTGATTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGCAGCGTATGCACTTGCAGCGCGCGCAGGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACACAGATGTACAGCTGTTTAAAAAGTGTGACTTTGTGAGTGTGTGTGTGTGTGTGTGTTTTTGTGTCTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTG-CCTCTCG-AGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGCCTATTTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCTCTGATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAA-CTTGC-AGCTT-CTACACTAAATCGAAAGGTT-GCGTAA-GAGT-GGAAATGATGTGTAACGCGTTGCCGCTTCTTCTTCTTTTTTTGTTTTGTTTAATCCGCCGTTAACTTCTCGGCCCTTGTGTATGCTTCATTTACTTCCAGTTCCAGTT]

[-] EMBL BM594140             [AGATGTTTAAATTTTGTTAACGCTCAAGCAGCGCGCGTGATTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGCAGCGTATGCACTTGCAGCGCGCGCAGGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACACAGATGTACAGCTGTTTAAAAAGTGTGACTTTGTGAGTGTGTGTGTGTGTGTGTGTTTTTGTGTCTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTG CCTCTCG AGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGCCTATTTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCTCTGATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAA CTTGC AGCTT CTACACTAAATCGAAAGGTT GCGTAA GAGT GGAAATGATGTGTAACGCGTTGCCGCTTCTTCTTCTTTTTTTGTTTTGTTTAATCCGCCGTTAACTTCTCGG                                    ]
[-] EMBL BX625027             [                             AGCGCGCGTGATTCGCTGCTTTTCCGATGCGTAAACCATTGCGTGCGCGCAGCGTATGCACTTGCAGCGCGCGCAGGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACACAGATGTACAGCTGTTTAAAAAGTGTGACTTTGTGAGTGTGTGTGTGTGTGTGTGTTTTTGTGTCTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTG CCTCTCG AGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGCCTATTTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCTCTGATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAA CTTGC AGCTT CTACACTAAATCGAAAGGTT GCGTAA GAGT GGAAATGATGTGTAACGCGTTGCCGCTTCTTCTTCTTTTTTTGTTTTGTTTAATCCGCCGTTAA                                            ]
[-] EMBL BX605283             [                                                           GTAAACCATTGCGTGCGCGCAGCGTATGCACTTGCAGCGCGCGAAGGTCCTCACAACAGCTTCTTGGTAGAGAATGTACAGATAAAACACAGATGTACAGCTGTTTAAAAAGTGTGACTTTGTGAGTGTGTGTGTGTGTGTGTGTTTTTGTGTCTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTG CCTCTCG AGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGCCTATTTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCTCTGATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAA CTTGC AGCTT CTACACTAAATCGAAAGGTT GCGTAA GAGT GGAAATGATGTGTAACGCGTTGCCGCTTCTTCTTCTTTTTTTGTTTTGTTTAATCCGCCGTTAACTTCTATTCCCTTGTGTATGCTTCATTTACTTCCAGTTCCAGTT]
[+] EMBL BX619355             [                                                                                                                                                                                           tgntgnTGTGGGTGTGTTTTTGTGTCTGTGGCTTGTGTTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGACCTCTCGNAGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGCCTATTTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTGCATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCTCTGATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATTCTACACAAGGCCAAACCTTGCAAGCTTCCTACACTAAATCGAAAGGTTGGCGTAANNAGTGGGAAAT                                                                                                      ]




>consensus_8743#1
AGATGTTTAAATTTTGTTAACGCTCAAGCAGCGCGCGTGATTCGCTGCTTTTCCGATGCG
TAAACCATTGCGTGCGCGCAGCGTATGCACTTGCAGCGCGCGCAGGTCCTCACAACAGCT
TCTTGGTAGAGAATGTACAGATAAAACACAGATGTACAGCTGTTTAAAAAGTGTGACTTT
GTGAGTGTGTGTGTGTGTGTGTGTTTTTGTGTCTGTGCATTGTGTTGCCGTTCCTGTATG
TTCTTGTTTCTACTCTTGCCTCTCGAGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGC
CTATTTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGC
TGCATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCT
CTGATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATT
CTACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAGAGTGGAAA
TGATGTGTAACGCGTTGCCGCTTCTTCTTCTTTTTTTGTTTTGTTTAATCCGCCGTTAAC
TTCTCGGCCCTTGTGTATGCTTCATTTACTTCCAGTTCCAGTT

consensusID : consensus_8743#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence

                              [AGTACGACGAGGAGCACGAATGGGTGGCCCATGTCATTTGTTTTTGTTCCTTCGTTTTGCTAAGTGTTTATTAGACGAAAGGTTTTCTCTATACTATCCTTTTACGATTTAGCCACTAGAGACTGTAACGGCTTGAGTTTGTGTGTGTGAGGGAGAGAAAGGGACTTAATCTTCGTTTTTTTTTTGTATAATCACTATAAGCGCAACGTAAGCTACCGTACTAATCCGCCTGTCCCTGGCGCGTTCCATTGTGTTAGCGTTCAAGAAATTGTGCCTTTTCCTATCGACCAAATGAAGCCGTTGGAGA]

[-] EMBL BX614637             [AGTACGACGAGGAGCACGAATGGGTGGCCCATGTCATTTGTTTTTGTTCCTTCGTTTTGCTAAGTGTTTATTAGACGAAAGGTTTTCTCTATACTATCCTTTTACGATTTAGCCACTAGAGACTGTAACGGCTTGAGTTTGTGTGTGTGAGGGAGAGAAAGGGACTTAATCTTCGTTTTTTTTTTGTATAATCACTATAAGCGCAACGTAAGCTACCGTACTAATCCGCCTGTCCCTGGCGCGTTCCATTGTGTTAGCGTTCAAGAAATTGTGCCTTTTCCTATCGACCAAATGAAGCCGTTGGAGA]




>consensus_8743#2
AGTACGACGAGGAGCACGAATGGGTGGCCCATGTCATTTGTTTTTGTTCCTTCGTTTTGC
TAAGTGTTTATTAGACGAAAGGTTTTCTCTATACTATCCTTTTACGATTTAGCCACTAGA
GACTGTAACGGCTTGAGTTTGTGTGTGTGAGGGAGAGAAAGGGACTTAATCTTCGTTTTT
TTTTTGTATAATCACTATAAGCGCAACGTAAGCTACCGTACTAATCCGCCTGTCCCTGGC
GCGTTCCATTGTGTTAGCGTTCAAGAAATTGTGCCTTTTCCTATCGACCAAATGAAGCCG
TTGGAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8743#0      TTGTTGTTCATTATGCTACGTATTGTTGTGTAGTATGCCATGCTTTTGCTTTTCTCTAGC 60
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      ATTCAGTTTTGGGGAACGATCGAGCGGGAGGCTTTTTCCTTGTTTAGTAGATTTTGGTTT 120
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------AGATGT 6
                                                                                  

consensus_8743#0      GTTTCCTCTCTATTGTAACGCGTTTGTTGTGGTTGGTTTTTGTTTCATTAATTATAAATA 180
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      TTAAATTTTGTTAACGCTCAAGCAGCGCGCGTGATTCGCTGCTTTTCCGATGCGTAAACC 66
                                                                                  

consensus_8743#0      ATAAAAAAAAATCATAACGATTGGCAAACGGCAAATGTCGACAGAACGCTTCGCTGCGGC 240
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ATTGCGTGCGCGCAGCGTATGCACTTGCAGCGCGCGCAGGTCCTCACAACAGCTTCTTGG 126
                                                                                  

consensus_8743#0      ATATTCCAGCAATGGCAGTCTCTACTACGGGCCAAACGCAAGCGTGTGTGTGTGTGTGTG 300
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      TAGAGAATGTACAGATAAAACACAGATGTACAGCTGTTTAAAAAGTGTGACTTTGTGAGT 186
                                                                                  

consensus_8743#0      TGTGTGTGTGTAGTACGACGAGGAGCACG---AATGGGTGGCCCATGTCATTTGTTTTTG 357
consensus_8743#2      -----------AGTACGACGAGGAGCACG---AATGGGTGGCCCATGTCATTTGTTTTTG 46
consensus_8743#1      GTGTGTGTGTGTGTGTGTTTTTGTGTCTGTGCATTGTGTTGCCGTTCCTGTATGTTCTTG 246
                                  **  *     * *   *   * ** ** ***  *    * **** ***

consensus_8743#0      TTCCTTCGTTTTGCTAAGTGTTTATTAGA-CGAAAGGTTTTCTCTATACTATCCTTTTAC 416
consensus_8743#2      TTCCTTCGTTTTGCTAAGTGTTTATTAGA-CGAAAGGTTTTCTCTATACTATCCTTTTAC 105
consensus_8743#1      TTTCTACTCTTGCCTCTCGAGCTATTCTATCGTGTGCTTTTTTCCGAATCGAGCCTAT-- 304
                      ** ** *  **  **       ****  * **   * **** **   *     * * *  

consensus_8743#0      GATTTAGCCACTAGAGACTGTAACGGCTTCGGT---GTGTTTGTGTGTGTTTTTAAGGGA 473
consensus_8743#2      GATTTAGCCACTAGAGACTGTAACGGCTT-------GAGTTTGTGTGTGT----GAGGGA 154
consensus_8743#1      --TTTTCCTCCGACTGACTGTAAGTGCATTCGTCGTATATTTTTGTTTGTTGTTGAGCTG 362
                        ***  *  * *  ********  ** *          *** *** ***     **   

consensus_8743#0      GAGAAAGGGACTT-AATCTTCGTTTTTT------ATA------ATCACTATAAGCGCAAC 520
consensus_8743#2      GAGAAAGGGACTT-AATCTTCGTTTTTTTTTTGTATA------ATCACTATAAGCGCAAC 207
consensus_8743#1      CATCCCTCGATTTTAAGCTATCTAAACAAGGTGCATATCGCCCGTTCCTGTAGTTCCTCT 422
                       *      ** ** ** **   *           ***       *  ** **    *   

consensus_8743#0      GTAAGC-TATCGCACTAATCCGCCTTCACTCTCTGTCCCTGGCGCGTTCCATTGTGTT-- 577
consensus_8743#2      GTAAGC-TACCGTACTAATCCGCCT---------GTCCCTGGCGCGTTCCATTGTGTTAG 257
consensus_8743#1      GATCGTGTGCTCCACTATTTCGTCTGCTTTCGGGGTTTCTCTTTCATATCATCACATTC- 481
                      *   *  *     **** * ** **         **  **    * *  ***    **  

consensus_8743#0      ----CAAG----AAATTGTGCCTTTTCCCATCGACCAAATGAAGCCGTCGGAGATGTTTA 629
consensus_8743#2      CGTTCAAG----AAATTGTGCCTTTTCCTATCGACCAAATGAAGCCGTTGGAGA------ 307
consensus_8743#1      TACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAAAGGTTGCGTAAGAGTGGAAAT 541
                          ****    ** ***   *** * *  *  * * ** *    ***  ***       

consensus_8743#0      AATTTTGTTAACGCTCAAGCAGCAATTGGCGCACGTGGTTCGCTGCTTTTCCGATGCGTA 689
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      GATGTGTAACGCGTTGCCGCTTCTTCTTCTTTTTTTGTTTTGTTTAATCCGCCGTTAACT 601
                                                                                  

consensus_8743#0      AACCATTGCGTGCGCGTGGCGTATGCACTTGCAGCGGGCGCAAGTCCTCACAACAGCTTC 749
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      TCTCGGCCCTTGTGTATGCTTCATTTACTTCCAGTTCCAGTT------------------ 643
                                                                                  

consensus_8743#0      TTGGTAGAGAATGTACAGATAAAACGTGAGTTAAGAGTGTGTGTTTGTGTGTGCATTGTG 809
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      TTGCCGTTCCTGTATGTTCTTGTTTCTACTCTTGCCTCTCGAGTTATTCTATCGTGTGCT 869
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      TTTTTACCGAATCGAGCCTATTTCCTCCCCCGACTGACTGTAAGTGCATTCGTCGTATAT 929
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      TTTTGTTTGTTGTTGAGCTGCATCCCGCGATTTTTAAGCTATCTAAACAAGGTGCATTAT 989
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      CGCCCGTTCCTGTAGTTCCTCTGATCGTGTGCTCCGCTATTTCGTCTGCTTTCGGGTTTT 1049
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      CTCTTTCATATCATCACATTCTACACAAGGCCAAACTTGCAGCTTCTACACTAAATCGAA 1109
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      AGGTTGCGTAAAAGTGGAAATGGTGTGCACGCGTTGCCGCTTCTTTTTTTGTTTAATCCG 1169
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      CCGTTAACTTCTATTCCCTTGTGTATGCTTCATTTACTTTCAGTTCCAGTTGTTTGGGTG 1229
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      AATTTCCGTGCATTTTCCTTTCCTATTAGATTGCCATTAGGGCTTTTTCTTTGCATTTTG 1289
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      GGTTTCTGCGCTTCTTGCTGCTGCTGTGCTGCTTGTGTTTGCTTGTTCGTGGCATTTCCC 1349
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      GTTGTCCTCTCTCTTTAATTATAGTTAAAGTCTATATAATAGCGCCCACCAATCGTAAGA 1409
consensus_8743#2      ------------------------------------------------------------
consensus_8743#1      ------------------------------------------------------------
                                                                                  

consensus_8743#0      ATAATTAAATAAACGCAACATGTAAGCGG 1438
consensus_8743#2      -----------------------------
consensus_8743#1      -----------------------------