cluster # 8774

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Anopheles gambiae
cluster # 8774 cluster # 8774 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8774#0 length = 1087 sequences # 8
consensus_8774#1 length = 1078 sequences # 2

consensus_8774#2 length = 394 sequences # 1
consensus_8774#3 length = 318 sequences # 1

consensusID : consensus_8774#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1087
fasta sequence

                              [AAATGTATGT-AATGTGTGTATTTCGAGACATTAACCGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAG-TACGCCAGTAC-GGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTTAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAACTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCGTTATTTTCTTTTAGC-GTCATTTTTGTGTGTGTGTGTGTTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTACTGTGTATGAT-CCCTTCCA-TTTC-GTTT-GTTGT-GTAT-GTTGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCC-GGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGC--CACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATCTCTTTGAAATTTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCCATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACCGGACGCGTGGGTCG]

[+] EMBL CNS08CRF             [AAATGTATGT AATGTGTGTATTTCGAGACATTAACCGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAGATACGCCAGTACGGGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTTAATTCATTCCCTCTTTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAACTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCGTTATTTTCTTTTAGC GTCATTTTTGTGTGTGTGTGTGTTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTACTGTGTATGAT CCCTTCCA TTTC GTTT GTTGT GTAT GTGGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCC GGTTTT AAAACTAAACCTACTCAAAAGATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGCCACACACACTAGCCAGTta                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AGA284849            [  tTGTATGTAAATGTGTGTATTTCGAGACATTAACCGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAG TACGCCAGTAC GGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BX615701             [                                                                                                                 TTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAG TACGCCAGTAC GGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTTAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAACTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCGTTATTTTCTTTTAGC GTCATTTTTGTGTGTGTGTGTGTTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTACTGTGTATGAT CCCTTCCA TTTC G                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08CRE             [                                                                                                                  TGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAG TACGCCAGTAC GGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGA CTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTTAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAACTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCGTTATTTTCTTTTAGCGGTCATTTTTGTGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BX622968             [                                                                                                                               TCTCCGTTCCGATCATGCACTTTTGCATGAG TACGCCAGTAC GGTGTTTATCTCTATCGCTTCATTGCCTTTTTCCGTGGCTCCTAGCCCTAGCCTGCATGCTACACGCATCTACTAGAAACTGTAGATGGATCTGTAT GGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGATCCGTGTTAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAACTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCATTATTTTCTTTTAGC GTCATTTTTGTGTGTGTGTG     TTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTACTGTGTATGAT CCCTTCCA TTTC GTTT GTTGT GTAT GTTGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCC GGTTTT AAAACTAAACCTACTCAAAAGATAGATTTTACACACGAACCAATTGAAACAAA                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BM593279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCGTTATTTTCTTTTAGC GTCATTTTTGTGTGTGTGTGTGTTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTAC GTGTATGAT CCCTTCCA TTTC GTTT GTTGT GTAT GTTGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCC GGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGC  CACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATCTCTTTGAAATTTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCCATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACCGG            ]
[-] EMBL BX619923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTACGGGGTANGATCCCCTTCCATTTTCGGTTTGGTTGTGGTATNGTTGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCCNGGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGC  CACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATCTCTTTGAAATTTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCAT                                                                                                                                     ]
[-] EMBL BM614473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCC GGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGC  CACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATCTCTTTGAAATTTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCCATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACCGGACGCGTGGGTCG]




>consensus_8774#0
AAATGTATGTAATGTGTGTATTTCGAGACATTAACCGAACTTTTTGTTTACGTACCTTCA
CTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCA
GCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAGTACGCCAGTACGGTGTTTATCTC
CATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTA
CTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCC
GGGTGTCCGGTGGGTGGTCCGTGTTAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTT
CTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAA
CTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTC
CCTTCCAAAGACCCCGTTATTTTCTTTTAGCGTCATTTTTGTGTGTGTGTGTGTTTTTTT
TTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACG
CTTACTGTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTAGATGTCGCTAGTT
TGTAGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTCAAAACA
TAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGCC
ACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAA
CATGCAGAGCCATATCTGACAAAATCTGACAATCTGATCTCTTTGAAATTTTCAATCACA
TGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCATTCATTG
CCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCCATCGTGTAA
GGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACCGGACGCG
TGGGTCG

consensusID : consensus_8774#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1078
fasta sequence

                              [TCATTTCATTATCAACTAAAATTAAGAGCAACCTCCTCCTGCTCTACCATCGTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCATTATTTTCTTTTAGCGTCATTTTTGTGTGTGTGTGTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTACGTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTTCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATTTCTTTGAAATTTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCCATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACTATGTTGATGATAGTTGCTGTGGTGTGATATCGGTGGCGCCAGTCGGGAAGAATGCTGTTGATGATGCTGTTGATATTGCTGATGCTGAAGCAGCAGTTGCTGTTGCTGCTGTTGCTGTAATTGATGTTGCTGTAGTTGGGAACTATTGTAGTGGCGCAAATTGGGCTCATGTAGATGCTGTTGCTGTTGCTGCTGCATTCCTTGCTGAGTGGTCTGGGGATGTGATAGGTGAAGGTGGGAATGATACTGCTGATGCGAGTGCCGTTGTGAATTGGACTGTTGCTGACGGTGGTGCTGTTGCTGTAGTTGTGGCTGTTGTTGCTGTTGCTGTTGCTGTTGGTGATGATGCTGATGAAGATGGTGGTGATGCTGCTGCTGGGAAAAGTGCATGTTCTTCGGCGGTTCGGGTCAGTC]

[-] EMBL BM624489             [TCATTTCATTATCAACTAAAATTAAGAGCAACCTCCTCCTGCTCTACCATCGTCACTTAACTGCTTTCTTTCTTCCCTTCCAAAGACCCCATTATTTTCTTTTAGCGTCATTTTTGTGTGTGTGTGTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTTTGCTTCCTAACGCTTACGTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTAGATGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTTCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATTTCTTTGAAATTTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAGCATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCCATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACTATGTTGATGATAGTTGCTGTGGTGTGATATCGGTGGCGCCAGTCGG                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BX602694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGACTATGTTGATGATAGTTGCTGTGGTGTGATATCGGTGGCGCCAGTTGCGAAGAATGCTGTTGATGATGCTGTTGATATTGCTGATGCTGAAGCAGCAGTTGCTGTTGCTGCTGTTGCTGTAATTGATGTTGCTGTAGTTGGGAACTATTGTAGTGGCGCAAATTGGGCTCATGTAGATGCTGTTGCTGTTGCTGCTGCATTCCTTGCTGAGTGGTCTGGGGATGTGATAGGTGAAGGTGGGAATGATACTGCTGATGCGAGTGCCGTTGTGAATTGGACTGTTGCTGACGGTGGTGCTGTTGCTGTAGTTGTGGCTGTTGTTGCTGTTGCTGTTGCTGTTGGTGATGATGCTGATGAAGATGGTGGTGATGCTGCTGCTGGGAAAAGTGCATGTTCTTCGGCGGTTCGGGTCAGTC]




>consensus_8774#1
TCATTTCATTATCAACTAAAATTAAGAGCAACCTCCTCCTGCTCTACCATCGTCACTTAA
CTGCTTTCTTTCTTCCCTTCCAAAGACCCCATTATTTTCTTTTAGCGTCATTTTTGTGTG
TGTGTGTTTTTTTTTCATTCTAACTAATTCTTACTTTTCTGCTGTGGCTTCTATTTGCTT
TGCTTCCTAACGCTTACGTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTAGA
TGTCGCTAGTTTGTAGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACC
TACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTG
TCACCAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTTCTGTTTGTACAACACAACGA
TTCTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATTTCTTTGAAAT
TTTCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAAC
AGCATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTT
CCATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGAT
GACTATGTTGATGATAGTTGCTGTGGTGTGATATCGGTGGCGCCAGTCGGGAAGAATGCT
GTTGATGATGCTGTTGATATTGCTGATGCTGAAGCAGCAGTTGCTGTTGCTGCTGTTGCT
GTAATTGATGTTGCTGTAGTTGGGAACTATTGTAGTGGCGCAAATTGGGCTCATGTAGAT
GCTGTTGCTGTTGCTGCTGCATTCCTTGCTGAGTGGTCTGGGGATGTGATAGGTGAAGGT
GGGAATGATACTGCTGATGCGAGTGCCGTTGTGAATTGGACTGTTGCTGACGGTGGTGCT
GTTGCTGTAGTTGTGGCTGTTGTTGCTGTTGCTGTTGCTGTTGGTGATGATGCTGATGAA
GATGGTGGTGATGCTGCTGCTGGGAAAAGTGCATGTTCTTCGGCGGTTCGGGTCAGTC

consensusID : consensus_8774#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 394
fasta sequence

                              [CGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAGTTCGCCAGTTCGGGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTAAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTTGTCCATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCC]

[+] EMBL CNS08PUW             [CGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAGTTCGCCAGTTCGGGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTAAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTTGTCCATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCC]




>consensus_8774#2
CGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATATTCGTCACTAGTTGTAATATTA
TTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCGATCATGCACTTGTGCATG
AGTTCGCCAGTTCGGGTGTTTATCTCCATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGT
CCTAGCCTGCATGGAACACGCATCTACTAGAAACTGTAGATGGATCTGTATGGGGGGGAG
GGGAGTGGACCTGCGGACCCTTTCCCGGGTGTCCGGTGGGTGGTCCGTGTAAATTCATTC
CCTCTGTCCAGTCCTTCGTAATGCTTCTATTAACTGATTTATTTACTTCTAAGTTGTCCA
TCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCC

consensusID : consensus_8774#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence

                              [TGTGGCTTCTACTTTGCTTTGCTTCCTGAACGCTTACGTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTACGATGTCGCTAGTTTGTACGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTAACCTCGTGGCGATTCTGGCTGAGTCAT]

[-] EMBL BX466500             [TGTGGCTTCTACTTTGCTTTGCTTCCTGAACGCTTACGTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTACGATGTCGCTAGTTTGTACGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCACCAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTAACCTCGTGGCGATTCTGGCTGAGTCAT]




>consensus_8774#3
TGTGGCTTCTACTTTGCTTTGCTTCCTGAACGCTTACGTGTATGATCCCTTCCATTTCGT
TTGTTGTGTATGTTGCTACGATGTCGCTAGTTTGTACGCTGTCAGTATCCCCTTAGTCTT
TTCCGGTTTTAAAAACTAAACCTACTCAAAACATAGATTTTACACACGAACCAATTGAAA
CAAAATGGTACGTCCTTCTCTGTCACCAGCGCCACACACTAGCCAGTGAGTGTGATTAGC
TGCTGTTTGTACAACACAACGATTCTTGCAAAACATGCAGAGCCATATCTAACCTCGTGG
CGATTCTGGCTGAGTCAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8774#1      ------------------------------------------------------------
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      AAATGTATGTAATGTGTGTATTTCGAGACATTAACCGAACTTTTTGTTTACGTACCTTCA 60
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ------------------------------------------------------------
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CTTTACGTTCATATTCGTCACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCA 120
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ------------------------------------------------------------
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      GCTTTGTCTCCGTTCCGATCATGCACTTGTGCATGAGTACGCCAGTACGGTGTTTATCTC 180
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ------------------------------------------------------------
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CATCGCTTCATTGCCCTTTTCCGTGGCTCCTAGTCCTAGCCTGCATGGAACACGCATCTA 240
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ------------------------------------------------------------
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CTAGAAACTGTAGATGGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCC 300
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ------------------------------------------------------------
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      GGGTGTCCGGTGGGTGGTCCGTGTTAATTCATTCCCTCTGTCCAGTCCTTCGTAATGCTT 360
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ---------------------------------------------TCATTTCATTATCAA 15
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CTATTAACTGATTTATTTACTTCTAAGTCGTCCATCTAATTTAGATCATTTCATTATCAA 420
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      CTAAAATTAAGAGCAACCTCCTCCTGCTCTACCATCGTCACTTAACTGCTTTCTTTCTTC 75
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CTAAAATTAAGAGCATCCTGCTCCTGCTCTACCATCCTCACTTAACTGCTTTCTTTCTTC 480
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      CCTTCCAAAGACCCCATTATTTTCTTTTAGCGTCATTTTTGTGTGTGTGTGT---TTTTT 132
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CCTTCCAAAGACCCCGTTATTTTCTTTTAGCGTCATTTTTGTGTGTGTGTGTGTTTTTTT 540
consensus_8774#2      -------------CGAACTTTTTGTTTACGTACCTTCACTTTACGTTCATAT---TCGTC 44
                                                                                  

consensus_8774#1      TTTCATTCTAAC-TAATTCTTACTTTTCTGCTGTGGCTTCTA-TTTGCTTTGCTTCCT-A 189
consensus_8774#3      -------------------------------TGTGGCTTCTACTTTGCTTTGCTTCCTGA 29
consensus_8774#0      TTTCATTCTAAC-TAATTCTTACTTTTCTGCTGTGGCTTCTA-TTTGCTTTGCTTCCT-A 597
consensus_8774#2      ACTAGTTGTAATATTATTTTTTTGTTTTATATTTTGTTGCAGCTTTGTCTCCGTTCCG-A 103
                                                     * * * * *   ****  *   ****  *

consensus_8774#1      ACGCTTAC--GTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTA-GATGTCGC 246
consensus_8774#3      ACGCTTAC--GTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTACGATGTCGC 87
consensus_8774#0      ACGCTTACT-GTGTATGATCCCTTCCATTTCGTTTGTTGTGTATGTTGCTA-GATGTCGC 655
consensus_8774#2      TCATGCACTTGTGCATGAGTTCGCCAGTTCGG------GTGTTTATCTCCA-----TCGC 152
                       *    **  *** ****   *  *  **  *      **** * *  * *     ****

consensus_8774#1      TAGTTTGTA-GCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTC 305
consensus_8774#3      TAGTTTGTACGCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTC 147
consensus_8774#0      TAGTTTGTA-GCTGTCAGTATCCCCTTAGTCTTTTCCGGTTTTAAAAACTAAACCTACTC 714
consensus_8774#2      TTCATTGCC-CTTTTCCGTGGCTCCT-AGTCCTAGCCTGCATGGAACAC-GCATCTACTA 209
                      *   ***     * ** **  * *** **** *  ** *  *  ** **   * ***** 

consensus_8774#1      AAAAC-ATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCAC 364
consensus_8774#3      AAAAC-ATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCAC 206
consensus_8774#0      AAAAC-ATAGATTTTACACACGAACCAATTGAAACAAAATGGTACGTCCTTCTCTGTCAC 773
consensus_8774#2      GAAACTGTAGAT---GGATCTGTATGGGGGGGAGGGGAGTGGACCTGCGGACCCTTTCCC 266
                       ****  *****     *   * *      * *    * ***  *  *   * ** ** *

consensus_8774#1      CAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTTCTGTTTGTACAACACAACG--ATT 422
consensus_8774#3      CAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACG--ATT 264
consensus_8774#0      CAGCGCCACACACTAGCCAGTGAGTGTGATTAGCTGCTGTTTGTACAACACAACG--ATT 831
consensus_8774#2      GGGTGTC---CGGTGGGTGGTCCGTGTAAATTCATTCCCTCTGTCCAGTCCTTCGTAATG 323
                        * * *   *  * *   **  **** * *   * *  * *** **   *  **  ** 

consensus_8774#1      CTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATTTCTTTGAAATTT 482
consensus_8774#3      CTTGCAAAACATGCAGAGCCATATCTAACCTCGTG-GCGATTCTGGCTGAGTCAT----- 318
consensus_8774#0      CTTGCAAAACATGCAGAGCCATATCTGACAAAATCTGACAATCTGATCTCTTTGAAATTT 891
consensus_8774#2      CTTCTATTA---ACTGATTTATTTACTTCTAAGTT-GTCCATCCAGTAGGCCAACAGTGC 379
                      ***  *  *    * **   ** *    *    *  *    **                 

consensus_8774#1      TCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAG 542
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      TCAATCACATGCCAAGGAATTGCAAACATTCCAAAGCTGAGTTTGCTTCCCTGTTAACAG 951
consensus_8774#2      TCGAGGAATTCCGCC--------------------------------------------- 394
                                                                                  

consensus_8774#1      CATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCC 602
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CATTCATTGCCATCGTCATATTCATTTCTGTTTTTAGCTTATTAATTGAGCAGTGCTTCC 1011
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      ATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGA 662
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      ATCGTGTAAGGATGTGGCGGTTGTTGTTGAGATTGGTTCTGTTGTCGTTGTAAAAGATGA 1071
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      CTATGTTGATGATAGTTGCTGTGGTGTGATATCGGTGGCGCCAGTCGGGAAGAATGCTGT 722
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      CCGGACGCGTGGGTCG-------------------------------------------- 1087
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      TGATGATGCTGTTGATATTGCTGATGCTGAAGCAGCAGTTGCTGTTGCTGCTGTTGCTGT 782
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      ------------------------------------------------------------
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      AATTGATGTTGCTGTAGTTGGGAACTATTGTAGTGGCGCAAATTGGGCTCATGTAGATGC 842
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      ------------------------------------------------------------
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      TGTTGCTGTTGCTGCTGCATTCCTTGCTGAGTGGTCTGGGGATGTGATAGGTGAAGGTGG 902
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      ------------------------------------------------------------
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      GAATGATACTGCTGATGCGAGTGCCGTTGTGAATTGGACTGTTGCTGACGGTGGTGCTGT 962
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      ------------------------------------------------------------
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      TGCTGTAGTTGTGGCTGTTGTTGCTGTTGCTGTTGCTGTTGGTGATGATGCTGATGAAGA 1022
consensus_8774#3      ------------------------------------------------------------
consensus_8774#0      ------------------------------------------------------------
consensus_8774#2      ------------------------------------------------------------
                                                                                  

consensus_8774#1      TGGTGGTGATGCTGCTGCTGGGAAAAGTGCATGTTCTTCGGCGGTTCGGGTCAGTC 1078
consensus_8774#3      --------------------------------------------------------
consensus_8774#0      --------------------------------------------------------
consensus_8774#2      --------------------------------------------------------