cluster # 8778

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Anopheles gambiae
cluster # 8778 cluster # 8778 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8778#0 length = 1788 sequences # 7

consensus_8778#1 length = 849 sequences # 4
consensus_8778#2 length = 606 sequences # 1

consensusID : consensus_8778#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1788
fasta sequence

                              [CCGCCCACGCGTCCGCCGCGCTGTGCCGTCGATCAATCTCGGATCTTCTGCTTCGAGTGATTCGCCTTTTAAAGAACGTTTTGCTTTCTTTCTTTGTTTCATACCCCTCTGCCCACCGCAACATGCAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCGTGCCAAAATGCGTTCCGTATGCAGGAGGAAGGAGGAGGAGAGGAGGAGGAGAAGCAGGAGAAAACGGTCGGCGGAAGTTGGGACTATGTGATAAAC-TGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAGGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGGATTTGCCTTACACCATATTGAGACTGCCGATATGCTATGGCGTAGGAGACCGGAAAGGGCTGACACCGCGCATTATTATAGCCGGGATTTACTTAGCATCTCGGGGAAACGATGAAGCTACTCTGGACCGGCACGATGAAGATGAACGTGGTGCACGTGGAGGACGTGTGCGGCAGCATTTGGGAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACCCAGGGACTGATCAGCGAGCTGCTAGCCGATATGTTCGCCATCAAGATCGATTACT-GGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAG-CGGGACGGTGTGCAAAATACACCGCTCACGCCGTACATGGACCAGGAGCTGCTATTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAGCTGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTAGCGCTTGGCCAGCGCATCCATTATATACGTATTCTTATCTGTTATACATACACTAGTACGATCTCGTGGTGGATTTGGTGTCACGTCCAAGCAAAGCAGCACTCAGAATCCTACGAAAGAGAAAGATAGGGAGAAAAGAATAAAAAAAAAAAATTGTACACTAATGATGGGAAAGTCATACCTTAACGCCAAGCGTACACAATGAGGTGCTACAGACAGCGATCGATGTACACGACAACTTCCCCCAGATGATCTCCGGCACCGCGATCTTAATGGAAGTGTACTTCTCTTTTTATCACCATTCCAATCGGTGCTACGAGTGTGATTATCACTAGCTTAACTAAAGCGACGACGATGGAACAAAATTGATTCAATATTAGATAACTTGTACGCGTGTGTTAGTAGAAACTGCATTATTTGTGGAAATTTAATCTACGGATTGTATTATATTGCGTTTTGTTTGAAATGTACCATGTGCCTAAAATTTTATCATA]

[+] EMBL BM609721             [CCGCCCACGCGTCCGCCGCGCTGTGCCGTCGATCAATCTCGGATCTTCTGCTTCGAGTGATTCGCCTTTTAAAGAACGTTTTGCTTTCTTTCTTTGTTTCATACCCCTCTGCCCACCGCAACATGCAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCGTGCCAAAATGCGTTCCGTATGCAGGAGGAAGGAGGAGGAGAGGAGGAGGAGAAGCAGGAGAAAACGGTCGGCGGAAGTTGGGACTATGTGATAAAC TGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAGGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08YPM             [                                                                                                                                                                                                                                                                                                                                                                     GAAAGAGGAGAAAACGGTCGGCGGAAGTTGGGACTATGTGATAAAC TGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAGGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGGATTTGCCTTACACCATATTGAGACTGCCGATATGCTATGGCGTAGGAGACCGGAAAGGGCTGACACCGCGCATTATTATAGCCGGGATTTACTTAGCATCTCGGGGAAACGATGAATCTATTCTTGACCGGCACGATGAAGATGAACGTGGTGCACGTGGAGGACGTGTGCGGCAGCATTTGGGAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACCCAGGGACTGATCAGCGAGCTGCTAGCCGATATGTTCGCCATCAAGATCGATTACT GGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAG CGGGACGGTGTGCAAAATACACCGCTCACGCCGTACATGGACCAGGAGCTGCTATTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAGCTGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTAGCGCTTGGCCAGCGCATCCATTATATACGTATTCTTATCTGTTATACATACACTAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM635347             [                                                                                                                                                                                                                                                                                                                                                                                                   ccgcgaaacGATCAACGTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAGGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGGATTTGCCTTACACCATATTGAGACTGCCGATATGCTATGGCGTAGGAGACCGGAAAGGGCTGACACCGCGCATTATTATAGCCGGGATTTAC AAGCATCTCGGGGAAACGATGAAGCTACTCTGGACCGGCACGATGAAGATGAACGTGGTGCACGTGGAGGACGTGTGCGGCAGCATTTGGGAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACTCAGGGACTGATCAGCGAGCTGCTAGCCGAGATGTTCGCCATCAAGATCGATTACTGGGGGCGTTACGATGTCCAATATGACGAAGCTTGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAGCCGGGACGGTGTGCAAAATACACCGCTCACGCCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX614378             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCTCGGGGAAACGATGAAGCTACTCTGGACCGGCACGATGAAGATG ATGTGGTGCACGTGGAGGACGTGTGCGGCAGCATTTGGGAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACCCAGGGACTGATCAGCGAGCTGCTAGCCGATATGTTCGCCATCAAGATCGATTACT GGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAG CGGGACGGTGTGCAAAATACACCGCTCACGCCGTACATGGACCAGGAGCTGCTATTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAGCTGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTAGCGCTTGGCCAGCGCATCCATTATATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX614656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAAACGATGAAGCTACTCTGGACCGGCACGATGAAGATG ATGTGGTGCACGTGGAGGACGTGTGCGGCAGCATTTGGGAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACCCAGGGACTGATCAGCGAGCTGCTAGCCGATATGTTCGCCATCAAGATCGATTACT GGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAG CGGGACGGTGTGCAAAATACACCGCTCACGCCGTACATGGACCAGGAGCTGCTATTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAGCTGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS08YPN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACCCAGGGACTGATCAGCGAGCTGCTAGCCGATATGTTCGCCATCAAGATCGATTACT GGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAG CGGGACGGTGTGCAAAATACAACCCTCACGCCGTACATGGACCAGGAGCTGCTATTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAG TGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTAGCGCTTGGCCAGCGCATCCATTATATACGTATTCTTATCTGTTATACATACACTAGTACGATCTCGTGGTGGATTTGGTGTCACGTCCAAGCAAAGCAGCACTCAGAATCCTACGAAAGAGAAAGATAGGGAGAAAAGAATAAAAAAAAAAAATTGTACACTAATGATGGGAAAGTCATACCTTAACGCCAAGCGTACACAATGAGGTGCTACAGACAGCGATCGATGTACACGACAACTTCCCCCAGATGATCTCCGGCACCGCGATCTTAATGGAAGTGTACTTCTCTTTTTATCACCATTCCAATCGGTGCTACGAGTGTGATTATCACTAGCTTAACTAAAGCGACGACGATGGAACAAAATTGATTCAATATTAGATAACTTGTACGCGTGTGTTAGTAGAAACTGCATTATTTGTGGAAATTTAATCTACGGATTGTATTATATTGCGTTTTGTTTGAAATGTACCATGTGCCTAAAATTTTATCATA]
[+] EMBL BM588316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCGATTACT GGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAG CGGGACGGTGTGCAAAATACACCGCTCACGCCGTACATGGACCAGGAGCTGCTCTTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAGCTGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTAGCGCTTGGCCAGCGCATCCATTATATACGTATTCTTATCTGTTATACATACACTAGTACGATCTCGTGGTGGATTTGGCGTCACGTCCAAACAAAGCAGCATTCAGAATCCTACGAAAGAGAAAGGTAGGGAGAAAAGACTAGATAACGTAAATTGTACACTAATGATGGGAAAGTCATACCTTAACGCCAAGCGTACACAATGAGGTGCTACAGACAGCGATCGATGTACCAGACAACTTCCCCCAGATGATCTCCGGCACCGCGATCTTAATGGAAGTGTACTTCTCTTTTTATCACCATTCCAATCGGTGCTACGAGTGTGATT                                                                                                                                                                       ]




>consensus_8778#0
CCGCCCACGCGTCCGCCGCGCTGTGCCGTCGATCAATCTCGGATCTTCTGCTTCGAGTGA
TTCGCCTTTTAAAGAACGTTTTGCTTTCTTTCTTTGTTTCATACCCCTCTGCCCACCGCA
ACATGCAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCT
AGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCG
ACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCC
AACCTCGTGCCAAAATGCGTTCCGTATGCAGGAGGAAGGAGGAGGAGAGGAGGAGGAGAA
GCAGGAGAAAACGGTCGGCGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACGAA
ACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGC
AACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTG
CTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGG
CAAGTACAAGGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGGATTTGCCTTACACCAT
ATTGAGACTGCCGATATGCTATGGCGTAGGAGACCGGAAAGGGCTGACACCGCGCATTAT
TATAGCCGGGATTTACTTAGCATCTCGGGGAAACGATGAAGCTACTCTGGACCGGCACGA
TGAAGATGAACGTGGTGCACGTGGAGGACGTGTGCGGCAGCATTTGGGAGCTGCTGCAAA
CCGATCGCACGCTGCACGAAACGATCAACGTGTGCGATGACAGTGACGCTACCCAGGGAC
TGATCAGCGAGCTGCTAGCCGATATGTTCGCCATCAAGATCGATTACTGGGGCGTTACGA
TGTCCAATATGACGAAGCTCGACATGGCGGGTGCTATCGAGGAGATTAACGACCGTCACC
TTGGACCGTGGGCCGAGCTGTGCCAGCGGGACGGTGTGCAAAATACACCGCTCACGCCGT
ACATGGACCAGGAGCTGCTATTTCAGAAGCATCTGCATCTGAGCAACGAGAAGCTTAAAT
CGTACGGGTACAAGCTGCGCCGTCCCCGGATCACGAGGGAACTGCTAGAGGAGATAGTGC
AGGATTTCATCGATATGGGCCATTTTCCGCGCACCTTACTTGGCTGAGGCGTATTTACTA
TTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTAGCGCTTGGCCAGCGCATCCATTATAT
ACGTATTCTTATCTGTTATACATACACTAGTACGATCTCGTGGTGGATTTGGTGTCACGT
CCAAGCAAAGCAGCACTCAGAATCCTACGAAAGAGAAAGATAGGGAGAAAAGAATAAAAA
AAAAAAATTGTACACTAATGATGGGAAAGTCATACCTTAACGCCAAGCGTACACAATGAG
GTGCTACAGACAGCGATCGATGTACACGACAACTTCCCCCAGATGATCTCCGGCACCGCG
ATCTTAATGGAAGTGTACTTCTCTTTTTATCACCATTCCAATCGGTGCTACGAGTGTGAT
TATCACTAGCTTAACTAAAGCGACGACGATGGAACAAAATTGATTCAATATTAGATAACT
TGTACGCGTGTGTTAGTAGAAACTGCATTATTTGTGGAAATTTAATCTACGGATTGTATT
ATATTGCGTTTTGTTTGAAATGTACCATGTGCCTAAAATTTTATCATA

consensusID : consensus_8778#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 849
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGAACTCATCTGCCGCAACGGTCGCAATTTCCCCGCACCGATTGTGTTACATTTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTAATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAAT-GGA-GGAGGAAGGAGGAGAGG-AGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACG-AAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAAGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAAGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGG]

[+] EMBL BM616929             [CCGCCCACGCGTCCGCCCACGCGTCCGAACTCATCTGCCGCAACGGTCGCAATTTCCCCGCACCGATTGTGTTACATTTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTAATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM591065             [            CCGCCCACGCGTCCG  CTCATCTGCCGCAACGGTCGCAATTTCCCCGCACCGATTGTGTTACA TTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTTATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAATGGGAGGGAGGAAGGAGGAGAGGAAGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACG AAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAA                                                                                                                                                             ]
[+] EMBL BM643332             [                      ccgCGGACGCGTGGGCCGCAACGGTCGCAATTTCCCCGCACCGATTGTGTTACATTTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTAATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAAT GGA GGAGGAAGGAGGAGAGG AGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACGAAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGC                                                                                                                                                                                    ]
[+] EMBL BM605560             [                                                                                                                                   ccgGCTCCTGTTTAGTGCCATTTAATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAAT GGA GGAGGAAGGAGGAGAGG AGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACG AAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTATACTGAAGCTAAGCTTAAACTGTGCAACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTACCTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCCCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAAGCGAAGGTCGAGCAGGAGCTTATCGCCATAAAGG]




>consensus_8778#1
CCGCCCACGCGTCCGCCCACGCGTCCGAACTCATCTGCCGCAACGGTCGCAATTTCCCCG
CACCGATTGTGTTACATTTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCC
TTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTAATTGTTGTCCGTGTGCTTTGTTCCG
TACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGT
TTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAA
CAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAG
TGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGC
CACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGT
TTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAATGGAGGAGG
AAGGAGGAGAGGAGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATG
TGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGTA
TACTGAAGCTAAGCTTAAACTGTGCAACAGAAGCTGTGAAGTGTAAGGCTAAGCGCTACC
TTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGCC
CCATCGAGCCCTGGACGATGGTGGGCAAGTACAAAGCGAAGGTCGAGCAGGAGCTTATCG
CCATAAAGG

consensusID : consensus_8778#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence

                              [CCGCGGACGCGTGGGCCCGCACCGATTGTGTTACATTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTTATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAATGGGAGGAGGAAGGAGGAGAGGAGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTC]

[+] EMBL BM612803             [CCGCGGACGCGTGGGCCCGCACCGATTGTGTTACATTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTTATTGTTGTCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAATGGGAGGAGGAAGGAGGAGAGGAGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTC]




>consensus_8778#2
CCGCGGACGCGTGGGCCCGCACCGATTGTGTTACATTTTTTTGTTGCACTTTGTACATTC
ATTACATTTTCCGTTTCCTTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTTATTGTTG
TCCGTGTGCTTTGTTCCGTACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACC
TTTTTTTGGGTTTGCCGTTTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTG
TAGTGTGTGTAAAATAAACAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGAT
TTATTGGACGGCATCTAGTGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAG
TGGTCGATAAGACGCCGCCACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCG
CGGACGCACGGGTCGAGTTTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATG
CGTTCCGAATGGGAGGAGGAAGGAGGAGAGGAGGAGGAGAAGAAGCGGGCGCAAACGGTC
GGTGGAAGTTGGGACTATGTGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGAT
CCCGTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8778#1      CCGCCCACGCGTCCGCCCACGCGTCCGAACTCATCTGCCGCAACGGTCGCAATTTCCCCG 60
consensus_8778#2      ----------------------------------------CCGCGGACGCG-TGGGCCCG 19
consensus_8778#0      ------------------------------------------------------------
                                                                                  

consensus_8778#1      CACCGATTGTGTTACATTTTTTTTGTTGCACTTTGTACATTCATTACATTTTCCGTTTCC 120
consensus_8778#2      CACCGATTGTGTTACATTTTTTT-GTTGCACTTTGTACATTCATTACATTTTCCGTTTCC 78
consensus_8778#0      ------------------------------------------------------------
                                                                                  

consensus_8778#1      TTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTAATTGTTGTCCGTGTGCTTTGTTCCG 180
consensus_8778#2      TTCTGTAAGCCGTAGCTCCTGTTTAGTGCCATTTTATTGTTGTCCGTGTGCTTTGTTCCG 138
consensus_8778#0      ------------------------------------------------------------
                                                                                  

consensus_8778#1      TACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGT 240
consensus_8778#2      TACTATACGGATTAGTTAAATTATCGTGACTTATTTTGAACCTTTTTTTGGGTTTGCCGT 198
consensus_8778#0      ---------------CCGCCCACGCGTCCGCCGCGCTGTGCCGTCGATCAATCTCGGATC 45
                                              ***         **  ** *   *     * *    

consensus_8778#1      TTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAA 300
consensus_8778#2      TTCGGTTTCGTGTGCAATTCAGTTCCGCATTTTGTAGCTGTGTAGTGTGTGTAAAATAAA 258
consensus_8778#0      TTCTGCTTCGAGTG-------ATTCGCCTTTTAAAGAACGTTTTGCTTTCTTTCTTTGTT 98
                      *** * **** ***        ***  * ***       ** * *  *   *    *   

consensus_8778#1      CAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAG 360
consensus_8778#2      CAATGTCAAAACCGAACGTTCTAGTCCTTGGAGGATGCGGATTTATTGGACGGCATCTAG 318
consensus_8778#0      TCATACCC---CTCTGCCCACCGCAACATGCAGGATGCGGATTTATTGGACGGCATCTAG 155
                        **  *    *    *   *     * ** *****************************

consensus_8778#1      TGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGC 420
consensus_8778#2      TGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGC 378
consensus_8778#0      TGGATCATCTGGTTGCGAATGATCTAGCGGGACGCATTAAAGTGGTCGATAAGACGCCGC 215
                      ************************************************************

consensus_8778#1      CACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGT 480
consensus_8778#2      CACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGT 438
consensus_8778#0      CACTAATGGCGTGGCTTAACAGCCGACACACGCAAGCATTCGCGGACGCACGGGTCGAGT 275
                      ************************************************************

consensus_8778#1      TTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAATGG-AGGAG 539
consensus_8778#2      TTGCGAGTGCCAATTTGATCAATCCAACCTCATGCCAAAATGCGTTCCGAATGGGAGGAG 498
consensus_8778#0      TTGCGAGTGCCAATTTGATCAATCCAACCTCGTGCCAAAATGCGTTCCGTATGC-AGGAG 334
                      ******************************* ***************** ***  *****

consensus_8778#1      GAAGGAGGAGAGGAGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTAT 599
consensus_8778#2      GAAGGAGGAGAGGAGGAGGAGAAGAAGCGGGCGCAAACGGTCGGTGGAAGTTGGGACTAT 558
consensus_8778#0      GAAGGAGGAGGAGAGGAGGAGGAGAAGCAGGAGAAAACGGTCGGCGGAAGTTGGGACTAT 394
                      **********  ********* ****** ** * ********** ***************

consensus_8778#1      GTGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGT 659
consensus_8778#2      GTGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTC------------ 606
consensus_8778#0      GTGATAAACTGTGCGGCCGAAACGAAACCCGGCCAAACGGATCCCGTCTACCAGGAGGGT 454
                      ************************************************            

consensus_8778#1      ATACTGAAGCTAAGCTTAAACTGTGCAACAGAAGCTGTGAAGTGTAAGGCTAAGCGCTAC 719
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      ATACTGAAGCTAAGCTTAAACTGTGCAACAGAGGCTGTGAAGTGTAAGGCTAAGCGCTAC 514
                                                                                  

consensus_8778#1      CTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGC 779
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CTTGAACTGAGCACTGGCAGTATGTGCTCCGACGAGAAGGTGCCGCAAAAGGAGGACTGC 574
                                                                                  

consensus_8778#1      CCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAAGCGAAGGTCGAGCAGGAGCTTATC 839
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CCCATCGAGCCCTGGACGATGGTGGGCAAGTACAAGGCGAAGGTCGAGCAGGAGCTTATC 634
                                                                                  

consensus_8778#1      GCCATAAAGG-------------------------------------------------- 849
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      GCCATAAAGGATTTGCCTTACACCATATTGAGACTGCCGATATGCTATGGCGTAGGAGAC 694
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CGGAAAGGGCTGACACCGCGCATTATTATAGCCGGGATTTACTTAGCATCTCGGGGAAAC 754
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      GATGAAGCTACTCTGGACCGGCACGATGAAGATGAACGTGGTGCACGTGGAGGACGTGTG 814
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CGGCAGCATTTGGGAGCTGCTGCAAACCGATCGCACGCTGCACGAAACGATCAACGTGTG 874
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CGATGACAGTGACGCTACCCAGGGACTGATCAGCGAGCTGCTAGCCGATATGTTCGCCAT 934
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CAAGATCGATTACTGGGGCGTTACGATGTCCAATATGACGAAGCTCGACATGGCGGGTGC 994
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      TATCGAGGAGATTAACGACCGTCACCTTGGACCGTGGGCCGAGCTGTGCCAGCGGGACGG 1054
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      TGTGCAAAATACACCGCTCACGCCGTACATGGACCAGGAGCTGCTATTTCAGAAGCATCT 1114
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      GCATCTGAGCAACGAGAAGCTTAAATCGTACGGGTACAAGCTGCGCCGTCCCCGGATCAC 1174
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      GAGGGAACTGCTAGAGGAGATAGTGCAGGATTTCATCGATATGGGCCATTTTCCGCGCAC 1234
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CTTACTTGGCTGAGGCGTATTTACTATTCGTTTGCTCGTACGTTTGCAGCAGTTCCACTA 1294
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      GCGCTTGGCCAGCGCATCCATTATATACGTATTCTTATCTGTTATACATACACTAGTACG 1354
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      ATCTCGTGGTGGATTTGGTGTCACGTCCAAGCAAAGCAGCACTCAGAATCCTACGAAAGA 1414
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      GAAAGATAGGGAGAAAAGAATAAAAAAAAAAAATTGTACACTAATGATGGGAAAGTCATA 1474
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CCTTAACGCCAAGCGTACACAATGAGGTGCTACAGACAGCGATCGATGTACACGACAACT 1534
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      TCCCCCAGATGATCTCCGGCACCGCGATCTTAATGGAAGTGTACTTCTCTTTTTATCACC 1594
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      ATTCCAATCGGTGCTACGAGTGTGATTATCACTAGCTTAACTAAAGCGACGACGATGGAA 1654
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      CAAAATTGATTCAATATTAGATAACTTGTACGCGTGTGTTAGTAGAAACTGCATTATTTG 1714
                                                                                  

consensus_8778#1      ------------------------------------------------------------
consensus_8778#2      ------------------------------------------------------------
consensus_8778#0      TGGAAATTTAATCTACGGATTGTATTATATTGCGTTTTGTTTGAAATGTACCATGTGCCT 1774
                                                                                  

consensus_8778#1      --------------
consensus_8778#2      --------------
consensus_8778#0      AAAATTTTATCATA 1788