cluster # 8794

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8794 cluster # 8794 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8794#0 length = 1372 sequences # 10

consensus_8794#1 length = 664 sequences # 1
consensus_8794#2 length = 480 sequences # 1

consensusID : consensus_8794#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1372
fasta sequence

                              [CGTTAGAATTCGACATAATGTTTACGCTTTAAAAGTTTTGCTCGTACCTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGT-G-TAATGCTGCTGAAATACAACATAGAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAG-TGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGCAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAAACTTTCC-TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACCTCGATGCACATACTTTA-TTTTGTGAACTTATGCATTACGATCCAACAAAACGACTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTCGATAATGTAAGCCTGGTACCACCAGAGCTTTAGTCCTAATGCAACCGAAACTGATTGATCAATTAAATTTGCGCATTAAAACCTTCGACGATGATCTCGCAATTCCGCCTCAAACTCTGCCCCGACAGCTTCCGCATAAAATAGTTGCAAAAGACATAAAAAACGTTTAAGACGACAAAACA-CACAGGACGTTGATGGACATGTTCAG-AGATGAAACAGCTGAGCATAACTTACATGTGGCAT-AAAAACGTTTTTACTCAGATTGCAATTTCATGGGCAACCCCTTCGTACAGTACGTATTGAAATAGTCATAGATTGTATATGGCCACTCTGCAAACCGATTGTGACAAATTGTTTACGTTTTGCGCAATAAACT]

[+] EMBL CNS08E4L             [CGTTAGAATTCGACATAATGTTTACGCTTTAAAAGTTTTGCTCGTACCTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGT G TAATGCTGCTGAAATACAACATAGAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAG TGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGCAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAAACTTTCC TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCAAGAAAAATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACCTCGATGCACATACTTTA TTTTGTGAACTTATGCATTACGATCCAACAAAACGACTTTCTCCAAAAAGCGCAAT                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX604536             [          CGACATAATGTTTACGCTTTAAAAGTTTTGCTCGTACCTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCCTTTAAAAGT G TAATGCTGCTGAAATACAACATAGAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAG TGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGCAGTTTTACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08ZBN             [                                                                                      TTTTAAAAGTAGATAATGCTGCTGAAATACAACATAGAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGATGGAGCat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX622330             [                                                                                                                                                                                                                                                                                           nACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAG TGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCAGATTTTGGATTGGCACGGGCGGTAAACTTTCC TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGATCTCGATGCACATACCTTATTTTTGTGAACTTATGCATTACGATCCAACAAAACGACTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTTGATAATGTAAGCCT                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS090MB             [                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCGTCACAAAAGCAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAAACTTTCC TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACCTCGATGCACATACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX626123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 gtAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATACTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGTCACATCAAACTGGCAGATTTTGGATTGGCACGGGCAGTAAACTTTCC TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACCTCGATGCACATACTTTA TTTTGTGAACTTATGCATTACGATCCAACAAAACGACTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTTGATAATGTAAGCCTGGTACCACCAGAGCTTTAGTCCTAATGCAACCGAAACTGATTGATCAATTAAATTTGCGCATTAAAACCTTCGACGATGATCTCGCAATTCCGCCTCAAACTCTGCGCCGACAGCTTCCGCATGGAATAGTTGCAAAAGACATAAAAAACGTTTAAGACGACAAAACA CACAGGACGTTGATGGACATGTTCAG AGATGAAACAGCTGAGCATAACTTACATGTGGCAT AAAAACGTTTTTACTCAGATTGCAATTTCATGGGCAAC                                                                                               ]
[-] EMBL CNS08E4M             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAAACTTTCCTTTTTTGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACCTCGATGCACATACTTTA TTTTGTGAACTTATGCATTACGATCCAACAAAACGACTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTCGATAATGTAAGCCTGGTACCACCAGAGCTTTAGTCCTAATGCAACCGAAACTGATTGATCAATTAAATTTGCGCATTAAAACCTTCGACGATGATCTCGCAATTCCGCCCCAAACTCTGCCCCGACAGCTTCCGCATAAAATAGTTGCAAAAGACATAAAAAACGTTTAAGACGACAAAACA CACAGGACGTTGATGGACATGTTCAG AGATGAAACAGCTGAGCATAACTTAAATGTGGCATAAAAAACGTTTTTACTCAGATTGCAATTTCATGGGCAACCCCTTCGTACAGTACGTATTGAAATAGTCATAGATTGTATATGGCCACTCTGCAAACCGATTGTGACAAATTGTTTACGTTTTGCGCAATAAACT]
[-] EMBL CNS090MC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAAACTTTCC TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACCTCGATGCACATACTTTA TTTTGTGAACTTATGCATTACGATCCAACAAAACGACTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTCGATAATGTAAGCCTGGTACCACCAGAGCTAAAAACCTAATGCAACCGAAACTGAT                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX612691             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTATCGGAATACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAGCACGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08ZBO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATACTTTA TTTTGTGAACTTATGCATTACGATCCAACTTTTTTTTTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTCGATAATGTAAGCCTGGTACCACCAGAGCTTTAGTCCTAATGCAACCGAAACTGATTGATCAATTAAATTTGCGCATTAAAACCTTCGACGATGATCTCGCAATTCCGCCTCAAACTCTGCCCCGACAGCTTCCGCATAAAATAGTTGCAAAAGACATAAAAAACGTTTAAGACGACAAAACATCACAGGACGTTGATGGACATGTTCAGTAGATGAAACAGCTGAGCATAACTTACATGTGGCAT AAAAACGTTTTTACTCAGATTGCAATTTCATGGGCAACCCC TCGTACAGTACGTATTGAAATAGTCATAGATTGTATATGGCCACTCTGCAAACCGATTGTGATAAATTGTTTACGTTTTGCGCAATAAACT]




>consensus_8794#0
CGTTAGAATTCGACATAATGTTTACGCTTTAAAAGTTTTGCTCGTACCTTAATTTCGTTG
TGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATA
GAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAA
GGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTC
AAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATT
TCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATA
GATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGAT
CGTCACAAAAGCAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGAT
GCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTG
CTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAAAC
TTTCCTATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATA
CTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTT
GCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTT
AAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATTTA
TCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGCAG
CACGACCTCGATGCACATACTTTATTTTGTGAACTTATGCATTACGATCCAACAAAACGA
CTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTCGATAATGTAAGCCTGGTACCACCA
GAGCTTTAGTCCTAATGCAACCGAAACTGATTGATCAATTAAATTTGCGCATTAAAACCT
TCGACGATGATCTCGCAATTCCGCCTCAAACTCTGCCCCGACAGCTTCCGCATAAAATAG
TTGCAAAAGACATAAAAAACGTTTAAGACGACAAAACACACAGGACGTTGATGGACATGT
TCAGAGATGAAACAGCTGAGCATAACTTACATGTGGCATAAAAACGTTTTTACTCAGATT
GCAATTTCATGGGCAACCCCTTCGTACAGTACGTATTGAAATAGTCATAGATTGTATATG
GCCACTCTGCAAACCGATTGTGACAAATTGTTTACGTTTTGCGCAATAAACT

consensusID : consensus_8794#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGTTTGCTCGTACCTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATAGAGGACGCTCAAAAGATGCAGAGGCGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCAGATTTTGGATTGGCACGGGCGGTAAACTTTCCTATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTT]

[+] EMBL BM635233             [CCGCCCACGCGTCCGCCCACGCGTCCGTTTGCTCGTACCTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATAGAGGACGCTCAAAAGATGCAGAGGCGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAATCGACCGGGAGGGCCACATCAAACTGGCAGATTTTGGATTGGCACGGGCGGTAAACTTTCCTATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGATATTT]




>consensus_8794#1
CCGCCCACGCGTCCGCCCACGCGTCCGTTTGCTCGTACCTTAATTTCGTTGTGTATTCTC
GATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATAGAGGACGCT
CAAAAGATGCAGAGGCGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTT
GCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATAGATGC
GAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCA
CAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCAT
CGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATCTGCTAAT
CGACCGGGAGGGCCACATCAAACTGGCAGATTTTGGATTGGCACGGGCGGTAAACTTTCC
TATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGATACTGCT
GGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCTTTGCCGA
GATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTATTTAAGAT
ATTT

consensusID : consensus_8794#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 480
fasta sequence

                              [ATCGCCCGAGGCGACATAATGTTACGCTTTAAAGTTTGCTCGTACTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATAAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCA]

[+] EMBL AL932851             [ATCGCCCGAGGCGACATAATGTTACGCTTTAAAGTTTGCTCGTACTTAATTTCGTTGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATAAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCA]




>consensus_8794#2
ATCGCCCGAGGCGACATAATGTTACGCTTTAAAGTTTGCTCGTACTTAATTTCGTTGTGT
ATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACATAAGG
ACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGGAAGGTA
CCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCACTCAAAC
GAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAATTTCTT
TGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAATAGATG
CGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAGATCGTC
ACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGGATGCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8794#0      --CGTTAGAATTCGACATAATGTTTACGCTTTAAAAGTTTTGCTCGTACCTTAATTTCGT 58
consensus_8794#2      ATCGCCCGAGG-CGACATAATGTT-ACGCTTTAAAG--TTTGCTCGTAC-TTAATTTCGT 55
consensus_8794#1      -CCGCCCACG--CGTC----CGCCCACGCGTCCG----TTTGCTCGTACCTTAATTTCGT 49
                        **        ** *     *   **** *       *********** **********

consensus_8794#0      TGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACA 118
consensus_8794#2      TGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACA 115
consensus_8794#1      TGTGTATTCTCGATGAGACGCGTAAACCTTTTAAAAGTGTAATGCTGCTGAAATACAACA 109
                      ************************************************************

consensus_8794#0      TAGAGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGG 178
consensus_8794#2      TA-AGGACGCTCAAAAGATGCAGAGGGTAGGTGTATACGATCGAGTGGATAAAATCGGGG 174
consensus_8794#1      TAGAGGACGCTCAAAAGATGCAGAGG---------------------------------- 135
                      ** ***********************                                  

consensus_8794#0      AAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCAC 238
consensus_8794#2      AAGGTACCTATGGTGTGGTGTACAAGGCGAAAGACATTCGGACCCAAAACTATGTAGCAC 234
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      TCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAA 298
consensus_8794#2      TCAAACGAATTCGGCTTGATAACGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAA 294
consensus_8794#1      ----------------------CGAAACGGAAGGTATACCGTCAACGGCAATGCGTGAAA 173
                                            **************************************

consensus_8794#0      TTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAA 358
consensus_8794#2      TTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAA 354
consensus_8794#1      TTTCTTTGCTGAAAGATCTGAAGCATCATTCAATAGTGGAGCTTTTCGACGTAGTCATAA 233
                      ************************************************************

consensus_8794#0      TAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAG 418
consensus_8794#2      TAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAG 414
consensus_8794#1      TAGATGCGAGCATTTACATGGTATTTGAATATTTGGACATGGATCTAAAGAAAATGCTAG 293
                      ************************************************************

consensus_8794#0      ATCGTCACAAAAGCAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGG 478
consensus_8794#2      ATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGG 474
consensus_8794#1      ATCGTCACAAAAGTAGTTTCACGCCGATGCTTGTAAAGAGTTACATGCACCAAATGCTGG 353
                      ************* **********************************************

consensus_8794#0      ATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATC 538
consensus_8794#2      ATGCCA------------------------------------------------------ 480
consensus_8794#1      ATGCCATCGCGTACTGTCATTTGAACCGTATCCTCCACCGGGATCTTAAACCTCAAAATC 413
                      ******                                                      

consensus_8794#0      TGCTAATCGACCGGGAGGGCCACATCAAACTGGCTGATTTTGGATTGGCACGAGCGGTAA 598
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      TGCTAATCGACCGGGAGGGCCACATCAAACTGGCAGATTTTGGATTGGCACGGGCGGTAA 473
                                                                                  

consensus_8794#0      ACTTTCCTATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGA 658
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ACTTTCCTATTAGAGTGTATACACACGAGGTGGTTACGCTTTGGTACCGTGCGCCAGAGA 533
                                                                                  

consensus_8794#0      TACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCT 718
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      TACTGCTGGGAACCAAATTTTACTGCGTTGGCGTTGACACCTGGAGTTTGGGATGTATCT 593
                                                                                  

consensus_8794#0      TTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTAT 778
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      TTGCCGAGATGATTCTTAAACGGCCGCTCTTCCCGGGAGACAGCGAGATTGATCAACTAT 653
                                                                                  

consensus_8794#0      TTAAGATATTTCGACAAATGGGTACGCCTGACGAAACGAAATGGCCCGGCGTTTCGCATT 838
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      TTAAGATATTT------------------------------------------------- 664
                                                                                  

consensus_8794#0      TATCGGATTACAAAGAATCCTTCCCTTACTGGGAACCGCAACCACTGCCAAATGAGATGC 898
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      AGCACGACCTCGATGCACATACTTTATTTTGTGAACTTATGCATTACGATCCAACAAAAC 958
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      GACTTTCTCCAAAAAGCGCAATGAGCCACTCTTATTTCGATAATGTAAGCCTGGTACCAC 1018
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      CAGAGCTTTAGTCCTAATGCAACCGAAACTGATTGATCAATTAAATTTGCGCATTAAAAC 1078
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      CTTCGACGATGATCTCGCAATTCCGCCTCAAACTCTGCCCCGACAGCTTCCGCATAAAAT 1138
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      AGTTGCAAAAGACATAAAAAACGTTTAAGACGACAAAACACACAGGACGTTGATGGACAT 1198
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      GTTCAGAGATGAAACAGCTGAGCATAACTTACATGTGGCATAAAAACGTTTTTACTCAGA 1258
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      TTGCAATTTCATGGGCAACCCCTTCGTACAGTACGTATTGAAATAGTCATAGATTGTATA 1318
consensus_8794#2      ------------------------------------------------------------
consensus_8794#1      ------------------------------------------------------------
                                                                                  

consensus_8794#0      TGGCCACTCTGCAAACCGATTGTGACAAATTGTTTACGTTTTGCGCAATAAACT 1372
consensus_8794#2      ------------------------------------------------------
consensus_8794#1      ------------------------------------------------------