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Anopheles gambiae
cluster # 8827 cluster # 8827       Sequences # 12       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8827#0 length = 2306 sequences # 11  
 consensus_8827#1 length = 675 sequences # 1  
consensusID : consensus_8827#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 2306
fasta sequence 
                              [CACAATGTACAGAAGTTTAACTTCTCCATTACCGACATTGACACTGGTTCGATCGAATGCATTCAGCAGGCCCAGGGCCAGCTACAAAATATGGGCCATATTCCACACAAAATGCGGATACACGCAAACGATGATGTTTACGAAACCACGAGGCACAGGCTTGCCGCCGCAGAAGAAAATCAAAAGAACAAGTGCACTAGGGAAATCAAACCTAATCAAACAGATATTGGGCGTAAAGTGAAGTTAAAAAACCCAGCCATCCGTAACATTCCTAGTAATAATACAGCAGTTGTAAACAAACGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAGCTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCTAAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAACAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGAAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCTCAGGAATCAGAAGATGGTGTTAGTTTGAGCTACTCACTCGTATCGAACGATGTTGCGAAACGGATAGAATCGTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCGCAGCAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCAGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTCGCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATACGAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCATAAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGGCTCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTTTGTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATCAATCAATCGCTTCGTAAGCAGACATTTTCGTACATGTTGCGGGAAAACTGTCAACATTGTGTTATTATCTCTTTGTTTTTGAACTTACATTGTAATTTTTAAAGAGTTTTTGGAACAAGCATTAGGACGGCGTATTGATTTGAGCACGGCTTCACACTGAGCGTATTGCGAATG-AAACTACGAGCCAAAATG-TCGAAATCATCACGAGTTAACTAAGTTAGCATTTATG-AATCATCGACATGTTTAACCG-ATGCAATTGGTTCAATTATCTTC-TTACAA-TTTCC-TC-TTTTTTGATTCATTTTCTTAAAGTTTCTATTCAATAACGTAGCTGTTTGTTGAACAGTTTTATTACGATTTATTCTCAACTCTCTCGTTATCCTTTTGCTTATTTGCTAAAAACGGCTGTAGTATACTTATGTTATGGGTTGTATGAATTATTAAGTTTATTGATAATTTCACAACCGATTCTCCTCCTCTATGAACTGTATTTAGAATGAGTGACACACATCCGATTATACTCATATG]

[+] EMBL CNS09B3H             [ ACAATGTACAGAAGTTTAACTTCTCCATTACCGACATTGACACTGGTTCGATCGAATGCATTCAGCAGGCCCAGGGCCAGCTACAAAATATGGGCCATATTCCACACAAAATGCGGATACACGCAAACGATGATGTTTACGAAACCACGAGGCACAGGCTTGCCGCCGCAGAAGAAAATCAAAAGAACAAATGCACTAGGGAAATCAAACCTAATCAAACCGATATTGGGCGTAAAGTGAAGTTAAAAAACCCAGCCATCCGTAACATTCCTAGTAATAATACAGCAGTTGTAAACAAACGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAGCTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCTAAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAACAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM590748             [ccgAATGTACAGAAGTTTAACTTCTCCATTACCGACATTGACACTGGTTCGATCGAATGCATTCAGCAGGCCCAGGGCCAGCTACAAAATATGGGCCATATTCCACACAAAATGCGGATACACGCAAACGATGATGTTTACGAAACCACGAGGCACAGGCTTGCCGCCGCAGAAGAAAATCAAAAGAACAAGTGCACTAGGGAAATCAAACCTAATCAAACAGATATTGGGCGTAAAGTGAAGTTAAAAAACCCAGCCATCCGTAACATTCCTAGTAATAATACAGCAGTTGTAAACAAACGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAGCTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCTAAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAACAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX624871             [                  AACTTCTCCATTACCGACATTGACACTGGTTCGATCGAATGCATTCAGCAGGCCCAGGGCCAGCTACAAAATATGGGCCATATTCCACACAAAATGCGGATACACGCAAACGATGATGTTTACGAAACCACGAGGCACAGGCTTGCCGCCGCAGAAGAAAATCAAAAGAACAAGTGCACTAGGGAAATCAAACCTAATCAAACAGATATTGGGCGTAAAGTGAAGTTAAAAAACCCAGCCATCCGTAACATTCCTAGTAATAATACAGCAGTTGTAAACAAACGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAGCTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCTAAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAACAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX621729             [                                                                                                                                                                                                                                                                                   TAATAATACAGCAGTTGTAAACAAACGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAGCTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCTAAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAACAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGTAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS090D7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAAAACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGAAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCTCAGGAATCAGAAGATGGTGTTAGTTTGAGCTACTCACTCGTATCGAACGATGTTGCGAAACGGATAGAATCGTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCGCA CAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCAGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTCGCACGAACCGAAGAATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATACGAAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08ECT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACAATCATCAGTCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGAAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCCCAGGAATCAGAAGATGGTGTTAGTTTGAGCTACTCACTCGTATCGAACGATGTTGCGAAACGGATAGAATCGTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCGCAAGAG TGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCAGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTCGCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS090D8             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGTTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCAAAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCAACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCTCAGGAATCAGAAGATGGTGTTAGTTTGAGCTAATAACTCGTATCGAACGATGTTGCGAAACGGATAGAATCGTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCGCAGCAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCAGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATTTGTCGCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATACGAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCATAAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGGCTCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTTTGTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATCAATCAATCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08ECU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCCCAGGAATCAGAAGATGGTGTTAGTTTGAGCTACTCACTCGTATCGAACGATGTTGCGAAACGGATAGAATCGTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCGCAGCAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCAGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTCGCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATACGAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCATAAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGGCTCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTTTGTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATAAATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM618413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgCTCACTCGTATCGAACGATGTTGCGAAACGGATAGAATCGTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCGCAGCAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCAGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTCGCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATACGAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCATAAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGGCTCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTTTGTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATCAATCAATCGCTTCGTAAGCAGACATTTTCGTACATGTTGCGGGAAAACTGTCAACATTGTGTTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS09B3I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATACCGGCGGCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCTTTTTGAAGATGATCTGTCGCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATACGAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCATAAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGGCTCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTTTGTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATCAATCAATCGCTTCGTAAGCAGACATTTTCGTACATGTTGCGGGAAAACTGTCAACATTGTGTTATTATCTCTTTGTTTTTGAACTTACATTGTAATTTTTAAAGAGTTTTTGGAACAAGCATTAGGACGGCGTATTGATTTGAGCACGGCTTCACACTGAGCGTATTGCGAATG AAACTACGAGCCAAAATG TCGAAATCATCACGAGTTAACTAAGTTAGCATTTATG AATCATCGACATGTTTAACCG ATGCAATTGGTTCAATTATCTTC TTACAA TTTCC TC TTTTTTGATTCATTTTCTTAAAGTTTCTATTCAATAACGTAGCTGTTTGTTGAACAGTTTTATTACGATTTATTCTCAACTCTCTCGTTATCCTTTTGCTTATTTGCTAAAAACGGCTGTAGTATACTTATGTTATGGGTTGTATGAATTATTAAGTTTATTGATAATTTCACAACCGATTCTCCTCCTCTATGAACTGTATTTAGAATGAGTGACACACATCCGATTATACTCATATG]
[+] EMBL CNS09LU4             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGAGTTTTTGGAACAAGCATTAGGACGGCGTATTGATTTGAGCACAGCTTCACACTGAGCGTATTGCGAATGCAAACTACGAGCCAAAATGCTCGAAATCATCACGAGTTAACTAAGTTAGCATTTATGCAATCATCGACATGTTTAACCGCATGCAATTGGTTCAATTATCTTCTTTACAATTTTCCTTCTTTTTTTGATTtc                                                                                                                                                                                                                                   ]




>consensus_8827#0
CACAATGTACAGAAGTTTAACTTCTCCATTACCGACATTGACACTGGTTCGATCGAATGC
ATTCAGCAGGCCCAGGGCCAGCTACAAAATATGGGCCATATTCCACACAAAATGCGGATA
CACGCAAACGATGATGTTTACGAAACCACGAGGCACAGGCTTGCCGCCGCAGAAGAAAAT
CAAAAGAACAAGTGCACTAGGGAAATCAAACCTAATCAAACAGATATTGGGCGTAAAGTG
AAGTTAAAAAACCCAGCCATCCGTAACATTCCTAGTAATAATACAGCAGTTGTAAACAAA
CGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAG
CTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCT
AAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAA
CAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAG
TCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTT
CATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCT
CAGAGTAGGGTAGCGAATGGAAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAAC
ATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTT
GTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTA
AAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAA
GTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGG
CCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGT
CCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCG
GGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAG
AAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCTCAGGAATCAGAA
GATGGTGTTAGTTTGAGCTACTCACTCGTATCGAACGATGTTGCGAAACGGATAGAATCG
TCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGCG
CAGCAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATCA
GTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCGG
CTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTCG
CACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATAC
GAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCAT
AAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGGC
TCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTTT
GTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATCAATCAATCGCTTCGTAAGC
AGACATTTTCGTACATGTTGCGGGAAAACTGTCAACATTGTGTTATTATCTCTTTGTTTT
TGAACTTACATTGTAATTTTTAAAGAGTTTTTGGAACAAGCATTAGGACGGCGTATTGAT
TTGAGCACGGCTTCACACTGAGCGTATTGCGAATGAAACTACGAGCCAAAATGTCGAAAT
CATCACGAGTTAACTAAGTTAGCATTTATGAATCATCGACATGTTTAACCGATGCAATTG
GTTCAATTATCTTCTTACAATTTCCTCTTTTTTGATTCATTTTCTTAAAGTTTCTATTCA
ATAACGTAGCTGTTTGTTGAACAGTTTTATTACGATTTATTCTCAACTCTCTCGTTATCC
TTTTGCTTATTTGCTAAAAACGGCTGTAGTATACTTATGTTATGGGTTGTATGAATTATT
AAGTTTATTGATAATTTCACAACCGATTCTCCTCCTCTATGAACTGTATTTAGAATGAGT
GACACACATCCGATTATACTCATATG

consensusID : consensus_8827#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence 
                              [CCGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGTAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGTAGACGCGGTATAACAGATTCCAGAGACAGTAGCAATATGAATCCACGATCCAGGGAACAAGATGATCACAAAAATCAT]

[+] EMBL BM642053             [CCGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGTAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGTAGACGCGGTATAACAGATTCCAGAGACAGTAGCAATATGAATCCACGATCCAGGGAACAAGATGATCACAAAAATCAT]




>consensus_8827#1
CCGGCGAAACCCGGATATCAGCATACCGTTCATGATCCGCCTAATTCGCAGCAGCAACAC
GTACCGAAGCTGTCTGAGAATGGAAACTCTCAGAGTAGGGTAGCGAATGGTAGGCCAAAG
GCTGCGAATCCAGATTACATGAAATGCAACATAAAAGAACGTCTTATTCATATGCTAGCA
TTGAAGCCATACAAACGGCCAGAGTTGGTTGTAAAACTGCAGCAAGATGGAGTCCGTAAG
GAAGAGATGAAATGTACTCAGCAGATACTAAAAACCATATCCAGCACCCGAGACGGAGTT
CTTATACTGCATCGGAACATATGGAATGAAGTACAGGATGATTGGCCGTTTTATTCTGAA
CAAGATCGACAAGCCGTAAAACGGAGGAGGCCACAAAACTTGACGCCTCCTCTTAGCTCA
GACGGTGGCTCATCAACTTCTGGTCAGAGTCCTTCTAGTACACATAACGGGAATAGTCCT
CAATCGGGTAGCAAACGAGCTGTGCTTGCGGGCAGTGAAGAAGTTGGTTCTACTCCCACT
GCCAAAAAGCAACGAATCAGTCATTACAAGAAAGAAACTACTTCGGATCATACGAGTAGA
CGCGGTATAACAGATTCCAGAGACAGTAGCAATATGAATCCACGATCCAGGGAACAAGAT
GATCACAAAAATCAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8827#0      CACAATGTACAGAAGTTTAACTTCTCCATTACCGACATTGACACTGGTTCGATCGAATGC 60
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      ATTCAGCAGGCCCAGGGCCAGCTACAAAATATGGGCCATATTCCACACAAAATGCGGATA 120
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CACGCAAACGATGATGTTTACGAAACCACGAGGCACAGGCTTGCCGCCGCAGAAGAAAAT 180
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CAAAAGAACAAGTGCACTAGGGAAATCAAACCTAATCAAACAGATATTGGGCGTAAAGTG 240
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      AAGTTAAAAAACCCAGCCATCCGTAACATTCCTAGTAATAATACAGCAGTTGTAAACAAA 300
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CGTGATTCTATCTATAGCAACAATTCTGTGAATAAGACATCCTCCGTAGCAGCAAGCCAG 360
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CTATCATCTAATAATAGTGTTAATAGTTATAACAACCTAGCAACATCACCAAAACTAGCT 420
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      AAAACTAACGGTCTGCATCAGTCGTCCCAACAACAACTACAGTCTCAACAACAACTGCAA 480
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CAGCAACCTCTGCAACAACAGCCACAATCGCAGCATCTGCTTCAACAAAACAATCATCAG 540
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TCACAACCACCAACTCAACTGCCTCCTGTGCAGGCGAAACCCGGATATCAGCATACCGTT 600
consensus_8827#1      ------------------------------CCGGCGAAACCCGGATATCAGCATACCGTT 30
                                                    * ****************************

consensus_8827#0      CATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCT 660
consensus_8827#1      CATGATCCGCCTAATTCGCAGCAGCAACACGTACCGAAGCTGTCTGAGAATGGAAACTCT 90
                      ************************************************************

consensus_8827#0      CAGAGTAGGGTAGCGAATGGAAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAAC 720
consensus_8827#1      CAGAGTAGGGTAGCGAATGGTAGGCCAAAGGCTGCGAATCCAGATTACATGAAATGCAAC 150
                      ******************** ***************************************

consensus_8827#0      ATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTT 780
consensus_8827#1      ATAAAAGAACGTCTTATTCATATGCTAGCATTGAAGCCATACAAACGGCCAGAGTTGGTT 210
                      ************************************************************

consensus_8827#0      GTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTA 840
consensus_8827#1      GTAAAACTGCAGCAAGATGGAGTCCGTAAGGAAGAGATGAAATGTACTCAGCAGATACTA 270
                      ************************************************************

consensus_8827#0      AAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAA 900
consensus_8827#1      AAAACCATATCCAGCACCCGAGACGGAGTTCTTATACTGCATCGGAACATATGGAATGAA 330
                      ************************************************************

consensus_8827#0      GTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGG 960
consensus_8827#1      GTACAGGATGATTGGCCGTTTTATTCTGAACAAGATCGACAAGCCGTAAAACGGAGGAGG 390
                      ************************************************************

consensus_8827#0      CCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGT 1020
consensus_8827#1      CCACAAAACTTGACGCCTCCTCTTAGCTCAGACGGTGGCTCATCAACTTCTGGTCAGAGT 450
                      ************************************************************

consensus_8827#0      CCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCG 1080
consensus_8827#1      CCTTCTAGTACACATAACGGGAATAGTCCTCAATCGGGTAGCAAACGAGCTGTGCTTGCG 510
                      ************************************************************

consensus_8827#0      GGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAG 1140
consensus_8827#1      GGCAGTGAAGAAGTTGGTTCTACTCCCACTGCCAAAAAGCAACGAATCAGTCATTACAAG 570
                      ************************************************************

consensus_8827#0      AAAGAAACTACTTCGGATCATACGAGACCAAATCTAACGCCTAATGCTCAGGAATCAGAA 1200
consensus_8827#1      AAAGAAACTACTTCGGATCATACGAG-------TAGACGC--GGTATAACAGATTCCAGA 621
                      **************************          ****    *      ** **   *

consensus_8827#0      GATGGTGTTAGTTTGAGCTACTCACTCGTATCGAACGATG-TTGCGAAACGGATAGAATC 1259
consensus_8827#1      GACAGTAGCAATATGAATCCACGATCCAGGGAACAAGATGATCACAAAAATCAT------ 675
                      **  **   * * ***       *  *       * **** *  * ***   **      

consensus_8827#0      GTCGGTGTGTGATGCAGAAGCTGAACGGGAGCCATTCGATACTGGCTATCTGGATGGTGC 1319
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      GCAGCAGATGAACGGCGGGGGAGAAGATGATTTTGTAAACCAATTTACAAGGATAACATC 1379
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      AGTTGAGCAACGGCGTAGATACAAGACTGAATTTGACAACGAATACAAGGAATACCGGCG 1439
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      GCTGCATGAAGTTTTGGAGAATGCTTCAAGAAAGTTTGCTCAGTACGAAGATGATCTGTC 1499
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      GCACGAACCGAAGGATACACAACGCTACAAGGAAATTCAATTGAAAATTCTGAAAGAATA 1559
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CGAAAGAAGTTTTAAAAACGTCAAATTTCAACAAGACAAAGAGCGGTTTAACTATCTTCA 1619
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TAAAAAACTGTCTCATATCAAGCTACTTGTACGTGACTACGATACTTCGATAACTAACGG 1679
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CTCGTGCAGGCCACAGGAGAATTACTGACGATTGTTGAAGCACATGAAGCGCTCGTATTT 1739
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TGTATGTTGAAAAAGACAATATTTATTTTGATGGGATAAATCAATCAATCGCTTCGTAAG 1799
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CAGACATTTTCGTACATGTTGCGGGAAAACTGTCAACATTGTGTTATTATCTCTTTGTTT 1859
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TTGAACTTACATTGTAATTTTTAAAGAGTTTTTGGAACAAGCATTAGGACGGCGTATTGA 1919
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TTTGAGCACGGCTTCACACTGAGCGTATTGCGAATGAAACTACGAGCCAAAATGTCGAAA 1979
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TCATCACGAGTTAACTAAGTTAGCATTTATGAATCATCGACATGTTTAACCGATGCAATT 2039
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      GGTTCAATTATCTTCTTACAATTTCCTCTTTTTTGATTCATTTTCTTAAAGTTTCTATTC 2099
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      AATAACGTAGCTGTTTGTTGAACAGTTTTATTACGATTTATTCTCAACTCTCTCGTTATC 2159
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      CTTTTGCTTATTTGCTAAAAACGGCTGTAGTATACTTATGTTATGGGTTGTATGAATTAT 2219
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TAAGTTTATTGATAATTTCACAACCGATTCTCCTCCTCTATGAACTGTATTTAGAATGAG 2279
consensus_8827#1      ------------------------------------------------------------
                                                                                  

consensus_8827#0      TGACACACATCCGATTATACTCATATG 2306
consensus_8827#1      ---------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)