cluster # 8867

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Anopheles gambiae
cluster # 8867 cluster # 8867 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8867#0 length = 1499 sequences # 10

consensus_8867#1 length = 583 sequences # 1
consensus_8867#2 length = 474 sequences # 1

consensusID : consensus_8867#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1499
fasta sequence

                              [CCGCAATTTCACGTACACCGTTCATCTGCGTAAATAA-AATTCG-CATTTTCGTGTGGCTGTAACT-AAAAAGCAGCGAGTAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGTGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGG-AAGAGAAAGCTTCCCACGAGACGGT-GTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCTGGAGCAGGTGATCGGTAGCGAGGTGGTGGCCGGTGGTGCCGGCGGGGGCGATGCGGAAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAAGGCGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGCACAGCTGGAACATCGGCTGCACCAGCTGGAGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCGGCTGGCGGGCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATATCGGCCAAGGCGGCACTGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGCTGAACAATCTGCTGCAGCAGATGAACAGCATACAGGAGAAGTCGAACGCCACGGGGCAAGATCCGAACCGGGAGCAGAAGATCTTGGAGCTTTATGAAATCGCGAAAAGCACCGAACCGATCGTACAGGTCCTGCCCGACATATTGAACCGTATGCTGACACTGGAATCGTTGCACAAATATGCCACCAACTTTAGCAAGCTGTTCGCGGAGCTGGAAACCACACAAGCCTCCATCCTCAATGGGGTGGCCGCCAACAAGACGCTGCTCACCGGCGTGCAGGAAGCATTCGCGCAGAACCTGGAAAACGTCAACAAGGAGGTTAAGAAGCTCGAGGAACGCATGACCAAACTGCAGCAGATGATTAAGTAGGCTGTGCGTGCTCACCGGTGTAGAAGATAGTCCATTCTCTCGTAAGCTGTGTCTGCTGTGTGGTAAGAATGCTTCGTCACAATTATTCCACCCCTCATACTGCAATGATGCTTTGTTTTCGT-CCGTGTGAAAAAAAAACAACTAAAAAACGTGAATATTTATTTAATCGCAATCTATTAATTTTAATTACTCATTGGGCACAAAATGTTAAATGAAGTTGCTTTGTGCAGGTCGCTGAACGGCGGCCGC]

[+] EMBL BM611869             [CCGCAATTTCACGTACACCGTTCATCTGCGTAAATAA AATTCG CATTTTCGTGTGGCTGTAACT AAAAAGCAGCGAGTAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGCGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGG AAGAGAAAGCTTCCCACGAGACGGTGGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09DVM             [                taCGTTCATCAGCGTAAATAA AATTCGCCTTTTTCGTGTGGCTGTAATTGAAAAAACAGCGAATAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAATATCTGACCGGTGAGGTGGATTTTTCTGACGGGATCGGGCGGAAGAATCGGCTCGGCTATGACGCCCGCAGCCTGGACTACGAGCTGGCGGGTGATGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGG AAGAGAAAGCTTCCCACGAGACGGT GTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCTGGAGCAGGTGATCGGTAGCGAGGTGGTGGCCGGTGGTGCCGGCGGGGGCGATGCGGAAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAA GCGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGCACAGCTGGAACATCGGCTGCACCAGCTGGAGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCGGCTGGCGGGCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATATCGGCCAAGGCGGCACTGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGCTGAACAATCTGCTGCAG AGATGAACAGCATACAGGAGAAGTCGAACGCCACGGGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM603915             [                              ccgATAA AATTCG CATTTTCGTGTGGCTGTAACT AAAAAGCAGCGAGTAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGCGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGG AAGAGAAAGCTTCCCACGAGACGGT GTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCTGGAGCAGGTGATCGGCAGCGAGGTGGTGGCCGGTGGTGCTGGCGGGGGCGATGCGGAAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAAGGTGGTCGCGAACGAGCTGGTGCAGAGTGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AL693232             [                            gagttATAATAAATCG CATTTTCGNGTGGCTGTAACT AATAAGCAGCGAGTAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGG AAGTTCCGCGG AAGTATCTGACCGGCGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCT GACTATGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGG AAGAGAAAGCTTCCCACGAGACGGT GTTCGGGGTGGTCAGCACGG CAAGAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS08PAN             [                                                                                                  CCGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAACCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGTGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTACGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAAGAGAAAGCTTCCCACGAGACGGT GTCCCGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAACCTGAAGCTGGAGCAGGTGATCGGTAGCGAGGTGGTGGCCGGTGGTGCCGGCGGGGGCGATGCGGAAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAAGGCGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGCACAGCTGGAACATCGGCTGCACCAGCTGGAGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCGGCTGGCGGGCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATATCGGCCAAAGCGGCACTGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGTTGAACAATCTGCTGCAGCAGATGAACAGCATAAAGGAGAAGTCGAACGCCACGGGGCAAGATCCGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08WPO             [                                                                                                   CGAAATTCCAATATTTGCCTTATATCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAACCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGTGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTACGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAACTGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08S26             [                                                                                                                                                                             aAACCGTCGGACTACGATGAGGACGAACCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGTGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS09DVN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGAAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAAGGCGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGCACAGCTGGAACATCGGCTGCACCAGCTGGAGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCCGCTGGCGGGCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATATCGGCCAAGGCGGCACTGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGCTGAACAATCTGCTGCAGCAGATGAACAGCATACAGGAGAAGTCGAACGCCACGGGGCAAGATCCGAACCGGGAGCAGAAGATCTTGGAGCTTTATGAAATCGCGAAAAGCACCGAACCGATCGTACAGGTCCTGCCCGACATATTGAACCGTATGCTGACACTGGAATCGTTGCACAAATATGCCACCAACTTTAGCAAGCTGTTCGCGGAGCTGGAAACCACACAAGCCTCCATCCTCAATGGGGTGGCCGCCAACAAGACGCTGCTCACCGGCGTGCAGGAAGCATTCGCGCAGAACCTGGAAAACGTCAACAAGGAGGTTAAGAAGCTCGAGGAACGCATGACCAAACTGCAGCAGATGATTAAGTAGGCTGTGCGTGCTCACCGGTGTAGAAGATAGTCCATTCTCTCGTAAGCTGTGTCTGCTGTGTGGTAAGAATGCTTCGTCACAATTATTCCACCCCTCATACTGCAATGATGCTTTGTTTTCGT CCGTGTGAAAAAAAAACAACTAAAAAACGTGAATATTTATTTAATCGCAATCTATTAATTTTAATTACTCATTGGGCACAAAATGTTAAATGAAGTTGCTTTGTGCAGGTCGCTGAACGGCGGCCGC]
[-] EMBL CNS08PAO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCTGGTGCAGAGGGCGCGCGTGGAACAGCTGGAACATCGGCTGCACCAGCTGGGGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCGGCTGGCGGGCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATTTCGGCCAAAGCGGAACTGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGTTGAACAATCTGCTGCAGAAGATGAACAGCATACAGGAGAAGTCGAACGCCACGGGGCAAGATCCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS096I5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATGGGGTGGCCGCCAACAAGACGCTGCTCACCGGCGTGCAGGAAGCATTCGCGCAGAACCTGGAAAACGTCAACAAGGAGGTTAAGAAGCTCGAGGAACGCATGACCAAACTGCAGCAGATGATTAAGTAGGCTGTGCGTGCTCACCGGTGTAGAAGATAGTCCATTCTCTCGTAAGCTGTGTCTGCTGTGTGGTAAGAATGCTTCGTCACAATTATTCCACCCCTCATACTGCAATGATGCTTTGTTTTCGTCCCGTGTGAAAAAAAAACAACTAAAAAACGTGAATATTCATTTAATCGCAATCTATTAATTTTAATTACTCATTGGGCACAAAATGTT                                        ]




>consensus_8867#0
CCGCAATTTCACGTACACCGTTCATCTGCGTAAATAAAATTCGCATTTTCGTGTGGCTGT
AACTAAAAAGCAGCGAGTAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATA
TCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGG
ACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGG
ACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGTGAGGTGGACTTTTCCGACGGGA
TCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTG
AGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGC
TGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAGAGAAAGCTT
CCCACGAGACGGTGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGC
TGGAGCAGGTGATCGGTAGCGAGGTGGTGGCCGGTGGTGCCGGCGGGGGCGATGCGGAAG
CGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCG
ATCCGAAGGCGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGCACAGCTGGAACATC
GGCTGCACCAGCTGGAGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCGGCTGGCGG
GCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATATCGGCCAAGGCGGCAC
TGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGCTGAACAATCTGCTGCAGCAGA
TGAACAGCATACAGGAGAAGTCGAACGCCACGGGGCAAGATCCGAACCGGGAGCAGAAGA
TCTTGGAGCTTTATGAAATCGCGAAAAGCACCGAACCGATCGTACAGGTCCTGCCCGACA
TATTGAACCGTATGCTGACACTGGAATCGTTGCACAAATATGCCACCAACTTTAGCAAGC
TGTTCGCGGAGCTGGAAACCACACAAGCCTCCATCCTCAATGGGGTGGCCGCCAACAAGA
CGCTGCTCACCGGCGTGCAGGAAGCATTCGCGCAGAACCTGGAAAACGTCAACAAGGAGG
TTAAGAAGCTCGAGGAACGCATGACCAAACTGCAGCAGATGATTAAGTAGGCTGTGCGTG
CTCACCGGTGTAGAAGATAGTCCATTCTCTCGTAAGCTGTGTCTGCTGTGTGGTAAGAAT
GCTTCGTCACAATTATTCCACCCCTCATACTGCAATGATGCTTTGTTTTCGTCCGTGTGA
AAAAAAAACAACTAAAAAACGTGAATATTTATTTAATCGCAATCTATTAATTTTAATTAC
TCATTGGGCACAAAATGTTAAATGAAGTTGCTTTGTGCAGGTCGCTGAACGGCGGCCGC

consensusID : consensus_8867#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence

                              [ATCCGCACGNNNGGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGCGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAGAGAAAGCTTCCCACGAGACGGTGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCTGGAGCAGGTGATCGGCAGCGAGGTGGTGGCCGGTGGTGCTGGCGGGGGCGATGCGGCAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAAGGTGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGC]

[+] EMBL AL932464             [ATCCGCACGNNNGGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGCGAGGTGGACTTTTCCGACGGGATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTGAGGGTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAGAGAAAGCTTCCCACGAGACGGTGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCTGGAGCAGGTGATCGGCAGCGAGGTGGTGGCCGGTGGTGCTGGCGGGGGCGATGCGGCAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATCCGAAGGTGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGC]




>consensus_8867#1
ATCCGCACGNNNGGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGGACT
ACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAAGGACT
CGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGCGAGGTGGACTTTTCCGACGGGATCG
GGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGGTGAGG
GTGAGCGGGAAACGCCGCTGCAGCGCTGCCACCGGCTGAAGTGCGAAATGAACGAGCTGA
TGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAGAGAAAGCTTCCC
ACGAGACGGTGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGAAAGCCTGAAGCTGG
AGCAGGTGATCGGCAGCGAGGTGGTGGCCGGTGGTGCTGGCGGGGGCGATGCGGCAGCGA
AGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCGAGCAGCGATC
CGAAGGTGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGC

consensusID : consensus_8867#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 474
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTCAGCCCGTACGTGTCGTCCAGTGCCTTCTTCGAGTTCATTCCGTTCTCTGGCAAGCAGTTCCAGATGTGCTTCTCGGCCACCAACCAGTACCCGAACATGCCCAAGCTCAACTTCCTCAATGTTCTCAACTTTGACAAGGTCGGAAGCATGAACTGGGAGCTGGCATACGGTGAGAAGTGCCAGGGAGGATCGCACGTCTCGATGAAGGGTAAGCTGATCCAGTCGGAGCCCTACCGCCACTTCCTGCGTATCTCCGAGGCTGGCCAGAGCTGCAAGCAGCAGATGGACCAGGGATACTTCCAACTGCCCGCATGTCAAAACGCCACTCGCCAGGCCGGATACTTCGATCAGTACTCGTTCAACTTTGAGTACAAGGATGTCTCGAACTATGCAAAGAACCTGACCTACCAGTTCTTCGACTACGCTCGTTACTTCACCTT]

[+] EMBL BM594357             [CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTCAGCCCGTACGTGTCGTCCAGTGCCTTCTTCGAGTTCATTCCGTTCTCTGGCAAGCAGTTCCAGATGTGCTTCTCGGCCACCAACCAGTACCCGAACATGCCCAAGCTCAACTTCCTCAATGTTCTCAACTTTGACAAGGTCGGAAGCATGAACTGGGAGCTGGCATACGGTGAGAAGTGCCAGGGAGGATCGCACGTCTCGATGAAGGGTAAGCTGATCCAGTCGGAGCCCTACCGCCACTTCCTGCGTATCTCCGAGGCTGGCCAGAGCTGCAAGCAGCAGATGGACCAGGGATACTTCCAACTGCCCGCATGTCAAAACGCCACTCGCCAGGCCGGATACTTCGATCAGTACTCGTTCAACTTTGAGTACAAGGATGTCTCGAACTATGCAAAGAACCTGACCTACCAGTTCTTCGACTACGCTCGTTACTTCACCTT]




>consensus_8867#2
CCGCCCACGCGTCCGCCCACGCGTCCGGTCCTTCAGCCCGTACGTGTCGTCCAGTGCCTT
CTTCGAGTTCATTCCGTTCTCTGGCAAGCAGTTCCAGATGTGCTTCTCGGCCACCAACCA
GTACCCGAACATGCCCAAGCTCAACTTCCTCAATGTTCTCAACTTTGACAAGGTCGGAAG
CATGAACTGGGAGCTGGCATACGGTGAGAAGTGCCAGGGAGGATCGCACGTCTCGATGAA
GGGTAAGCTGATCCAGTCGGAGCCCTACCGCCACTTCCTGCGTATCTCCGAGGCTGGCCA
GAGCTGCAAGCAGCAGATGGACCAGGGATACTTCCAACTGCCCGCATGTCAAAACGCCAC
TCGCCAGGCCGGATACTTCGATCAGTACTCGTTCAACTTTGAGTACAAGGATGTCTCGAA
CTATGCAAAGAACCTGACCTACCAGTTCTTCGACTACGCTCGTTACTTCACCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8867#0      CCGCAATTTCACGTACACCGTTCATCTGCGTAAATAAAATTCGCATTTTCGTGTGGCTGT 60
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      AACTAAAAAGCAGCGAGTAATAAAGAATGGCGGATCCGAAATTCCAATATTTGCCTTATA 120
consensus_8867#1      -----------------------------------------------------------A 1
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      TCGCACACGACCAACCGGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGG 180
consensus_8867#1      TC-CGCACGNNNG---GGACGTCTACGAAACTCCGGACGTGAACGAGGCGGAAACGTCGG 57
consensus_8867#2      ------------------------------CCGCCCACGCGTCCG---CCCACGCGTCCG 27
                                                    *  *  *** *  **   *  *  **** *

consensus_8867#0      A--CTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAA 238
consensus_8867#1      A--CTACGATGAGGACGAGCCGGTGAACGATGCGATCGAGCGGCTGCACATCTCCACCAA 115
consensus_8867#2      GTCCTTCAGCCCGTACGTGTCGTCCAGTGCCTTCTTCGAGTTCATTCCGTTCTCTGGCAA 87
                         ** *     * *** * **   *  *      *****    * *   ****   ***

consensus_8867#0      GGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGTGAGGTGGACTTTTCCGACGG 298
consensus_8867#1      GGACTCGATCGGCAAGTTCCGCGGCAAGTATCTGACCGGCGAGGTGGACTTTTCCGACGG 175
consensus_8867#2      GCAGTTC-CAGATGTGCTTCTCGGCCA----CCAACCAGT-ACCCGAACATGCCCAA--- 138
                      * * *     *    * * * **** *    *  *** *  *   * ** *  ** *   

consensus_8867#0      GATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGG 358
consensus_8867#1      GATCGGGCGGAAGAACCGGCTCGGCTATGACGCCCGCAGCCTGGACTATGAGCTGGCGGG 235
consensus_8867#2      GCTCAACTTCCTCAATGTTCTCAACTTTGA----CAAGGTCGGAAGCATGAACTGGGAGC 194
                      * **         **    ***  ** ***    *   * * * *  **** ****  * 

consensus_8867#0      TGAGGGTGAGCGGGAAACGCCGCTGCAGCGC-TGCCACCGGCTGAAGTGCGAAATGAACG 417
consensus_8867#1      TGAGGGTGAGCGGGAAACGCCGCTGCAGCGC-TGCCACCGGCTGAAGTGCGAAATGAACG 294
consensus_8867#2      TGGCATACGGTGAGAAGTGCCAGGGAGGATCGCACGTCTCGATGAAGGGTAAGCTGATCC 254
                      **       * * ***  ***   *  *  *   *  *  * ***** *  *  *** * 

consensus_8867#0      AGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAGAGAAAG 477
consensus_8867#1      AGCTGATGGAGGAGATCGAAGCGTCCCGGGCGGACACGGGCCGCACGGCGGAAGAGAAAG 354
consensus_8867#2      AGTCG--GAGCCCTACCGCCACTTCCTGCGTATCTCCGAG--GCTGGCCAGAGCTGCAAG 310
                      **  *  *      * **   * *** * *      ** *  **  * * **   * ***

consensus_8867#0      CTTCCCACGAGACGG---TGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGA-AAGC 533
consensus_8867#1      CTTCCCACGAGACGG---TGTTCGGGGTGGTCAGCACGGCCAAGAAGGTGCTGGA-AAGC 410
consensus_8867#2      CAGCAGATGGACCAGGGATACTTCCAACTGCCCGCATG-TCAAAACGCCACTCGCCAGGC 369
                      *  *  * *   * *   *  *       * * *** *  *** * *   ** *  * **

consensus_8867#0      CTGAAGCTGGAGCAGGTGATCGGTAGCGAGGTGGTGGCCGGTGGTGCCGGCGGGGGCGAT 593
consensus_8867#1      CTGAAGCTGGAGCAGGTGATCGGCAGCGAGGTGGTGGCCGGTGGTGCTGGCGGGGGCGAT 470
consensus_8867#2      CGGATACTTCGATCAGTACTCGTT--CAACTTTGAGTACAAGGATGT---CTCGAACTAT 424
                      * **  **       **  ***    * *  * * *  *   * **    *  *  * **

consensus_8867#0      GCGGAAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCG 653
consensus_8867#1      GCGGCAGCGAAGAAACTGATTGCGCAGATCGAAGAGTACAGGAAGACGGGCGCGGTGTCG 530
consensus_8867#2      GCA------AAGAACCTGACCTACCAGTTCTTCGACTACGCTCGTTACTTCACCTT---- 474
                      **       ***** ****     *** **   ** ***           * *  *    

consensus_8867#0      AGCAGCGATCCGAAGGCGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGCACAGCTG 713
consensus_8867#1      AGCAGCGATCCGAAGGTGGTCGCGAACGAGCTGGTGCAGAGTGCGCGCGTGGC------- 583
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      GAACATCGGCTGCACCAGCTGGAGGTGGCGGTGGGTGCGAAACCGGAACGCATCAGCCGG 773
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      CTGGCGGGCACGACCGGCACGGGCAATTTGATCGAGGCAGTGCAAAACATATCGGCCAAG 833
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      GCGGCACTGCTGCAACCGTCCCAGCTGGACACGATCGAGCAGCGGCTGAACAATCTGCTG 893
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      CAGCAGATGAACAGCATACAGGAGAAGTCGAACGCCACGGGGCAAGATCCGAACCGGGAG 953
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      CAGAAGATCTTGGAGCTTTATGAAATCGCGAAAAGCACCGAACCGATCGTACAGGTCCTG 1013
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      CCCGACATATTGAACCGTATGCTGACACTGGAATCGTTGCACAAATATGCCACCAACTTT 1073
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      AGCAAGCTGTTCGCGGAGCTGGAAACCACACAAGCCTCCATCCTCAATGGGGTGGCCGCC 1133
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      AACAAGACGCTGCTCACCGGCGTGCAGGAAGCATTCGCGCAGAACCTGGAAAACGTCAAC 1193
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      AAGGAGGTTAAGAAGCTCGAGGAACGCATGACCAAACTGCAGCAGATGATTAAGTAGGCT 1253
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      GTGCGTGCTCACCGGTGTAGAAGATAGTCCATTCTCTCGTAAGCTGTGTCTGCTGTGTGG 1313
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      TAAGAATGCTTCGTCACAATTATTCCACCCCTCATACTGCAATGATGCTTTGTTTTCGTC 1373
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      CGTGTGAAAAAAAAACAACTAAAAAACGTGAATATTTATTTAATCGCAATCTATTAATTT 1433
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      TAATTACTCATTGGGCACAAAATGTTAAATGAAGTTGCTTTGTGCAGGTCGCTGAACGGC 1493
consensus_8867#1      ------------------------------------------------------------
consensus_8867#2      ------------------------------------------------------------
                                                                                  

consensus_8867#0      GGCCGC 1499
consensus_8867#1      ------
consensus_8867#2      ------