cluster # 8893

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Anopheles gambiae
cluster # 8893 cluster # 8893 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8893#0 length = 1397 sequences # 7
consensus_8893#1 length = 1058 sequences # 3

consensus_8893#2 length = 414 sequences # 1
consensus_8893#3 length = 390 sequences # 1

consensusID : consensus_8893#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1397
fasta sequence

                              [CTCAGTAGTTTAATCAATTTTGCTTTGCATCTTTGTTAAATCGTTTGTATTGAGGTTTGTTTGCTCTTTTTGTTTTTGGTTTTATTTTCCCATTTTGCTTCAGGATTGGGCTTCAGGATGTGGTCAGTTATTGCCTTTTCTTTAGGCACCGCAAAACAAAGGCACACAAAACCTACACGACAACACACAGACACACAAACGCAAGCAAACAAAACAACAGCAAGCAAAGGAAGGAACAGCTGAAATGGGAATAGTAAACTAAAGCGTAAAATACCCTCACAATCACCACCAACCCTAGTGCACCTAGTTATGACTTACACACCCGGAGAAAGATTATTAGTAAGTGCTAGGATACGATAAGCTATAAAACGTATGCCCGTCCCGTGGGTG-AAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGGCAGAGCAGAGATGTGAAGAAGTAGTGAGGTAGT------AGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGTTAAGCGAATTTGTTTTGTTTTTGTTTTTGTTTTTCG--TTTTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCAGCTTTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCGCCTCTCCCCATTTGTTGCTTCTCTAATAGCTCTTTAAGGTGTTTCTTCTCCCTTCTCAACTTTTTAGTGTTCTTGCGGTAAAGAAGAAATCTATCTATTATTATCTTGTATTTAACAAATGTTATGTATTATTTCTTTACGTTTTGGCATATATTAGTTTTCTCTCATTTTCCTTTTGTTTTCGTTTCGAAAAGTTT------CAAAGATAAAAAATCTATTGGC-AAAAAAACAGTCTTAGCATAGGTTTATCCAAATTTACACTGCTCCAAATGGATTCGATTGCGAAAGCAACAAAACTATGTATTGATTTAAATTTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAACTCCAATCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGGTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGGTTTCCGCTTTTCCCACACTTTTTTTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCATTTCACCTCCAATGGCGTTTGTTTTTTGGTAGCTCTTTTCAAA]

[+] EMBL BX620896             [CTCAGTAGTTTAATCAATTTTGCTTTGCATCTTTGTTAAATCGTTTGTATTGAGGTTTGTTTGCTCTTTTTGTTTTTGGTTTTATTTTCCCATTTTGCTTCAGGATTGGGCTTCAGGATGTGGTCAGTTATTGCCTTTTCTTTAGGCACCGCAAAACAAAGGCACACAAAACCTACACGACAACACACAGACACACAAACGCAAGCAAACAAAACAACAGCAAGCAAAGGAAGGAACAGCTGAAATGGGAATAGTAAACTAAAGCGTAAAATACCCTCACAATCACCACCAACCCTAGTGCACCTAGTTATGACTTACACACCCGGAGAAAGATTATTAGTAAGTGCTAGGATACGATAAGCTATAAAACGTATGCCCGTCCCGTGGGTG AAAAAAAGGAACAAAACGTGGAGCAAACGCAAGAGTGTATGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGGCAGAGCAGAGATGTGAAGAAGTAGTGAGGTAGT      AGAGGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGTTAAGCGAATTTGTTTTGTTTTTGTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM627458             [    ccgGTGTAATCAATTTTGCTTTGCATCTTTGTTAAATCGTTTGTATTGAGGTTTGTTTGCTCTTTTT TTTTTGGTTTTATTTTCCCTTTTCGCTTCA GTTTGGGCTTAAGGATGTGGTCAGTTATTGCCTTTTCTTTAGGCACCGCAAAACAAAGGCACACAAAACCTACACGACAACACACAGACACACAAACGCAAGCAAACAAAACAACAGCAAGCAAAGGAAGGAACCGCTGAAATGGGAATAGTAAACTAAAGCGTAAAATACCCTCACAATCACCACCAACCCTAGTGCACCTAGTTATGACTTACACACCCGGAGAAAGATTATTAGTAAGTGCTAGGATACGATAAGCTATAAAACGTATGCCCGTCCCGTGGGTGAAAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGGCAGAGCAGAGATGTGAAGCAGTAGTGAGGTAGT      AGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGTTAAGCGAATTTGTTTTGGTTTTGGTTTTGTTTTTCG    TTTTTTTTGTGTAATTGGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM640379             [                                                                                                                                                                                                                                                                                                                                                               ccgCGATAAGCTATAAAACGTATGCCCGTCCCGTGGGTG AAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCA GCAGAGCAGAGATGTGAAGAAGTAGTGAAGTAGTAGAAGAAGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGCTAAGCGAATTTGGTTTGTTTTTGTTTTTGTTTTTCGTTTTTTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCAGCTTTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCACCTCTCCCCATTTGTTGCTTCTCTAATAGCTCTTTAAGGTGTTTCTTCTCCCTTCTCAACTTTTTAGTGTTCTTGGGGTAAAGAAGAAATCTATCTATTATTATCTTGTATTTAGCAAATGTTATGTATTATTTCTTTACGTTTTGGCATATATTCGTTTTCAATCATTTTCCTTTTGTTTTCGTTTCGAAAAGTTTCAAACACAAAGATAAAAAATCTATTGGC AAAAAAACAGTCTTAGCATAGGTTTATCCAAATTTACACTGCTCCAAATGGATTCGATTGCGAATGCAACAA                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM592037             [                                                                                                                                                                                                                                                                                                                                                                                                   ccG AAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGGCAGAGCAGAGATGTGAAGCAGTAGTGAGGTAGT      AGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGTTAAGCGAATTTGTTTTGTTTTTGTTTTTGTTTTTCG  TTTTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCAGCTTTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCGCCTCTCCCCATTTGTTGCTTCTCTAATAGCTCTTTAAGGTATTTCTTCTCCCTTCTCAACTTTTTAGTGTTCTTGCGGTAAAGAAGAAATCTATCTATTATTATCTTGTATTTAACAAATGTTATGTATTATTTCTTTACGTTTTGGCATATATTAGTTTTCTCTCATTTTCCTTTTGTTGTCGTTTCGAAAAGTTT      CAAAGATAAAAAATCTATTGGCAAAAAAAACAGTCTTAGCATAGGTTTATCCAAATTTACACTGCTCCAAATGGATTCGATTG                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX615780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCTTTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCGCCTCTCCCCATTTGTTGCTTCTCTAATAGCTCTTTAAGGTGTTTCTTCTCCCTTCTCAACTTTTTAGTGTTCTTGCGGTAAAGAAGAAATCTATCTATTATTATGTTGTATTTAACAAATGTTATGTATTATTTCTTTACGTTTTGGCATATATTAGTTTTCTCTCATTTTCCTTTTGTTTTCGTTTCGAAAAGTTT      CAAAGATAAAAAATCTATTGGC AAAAAAACAGTCTTAGCATAGGTTTATCCAAATTTACACTGCTCCAAATGGATTCGATTGCGAAAGCAACAAAACTATGTATTGATTTAAATTTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAACTCCAATCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGGTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGGTTTCCGCTTTTCCCACACTTTTT                                                                                                                                      ]
[+] EMBL BX606642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATTTTCCTTTTGTTTTCGTTTCGAAAAGTTT      CAAAGATAAAAAATCTATTGGC AAAAAAACAGTCTTAGCATAGGTTTATCCAAATTTACACTGCTCCAAATGGATTCGATTGCGAAAGCAACAAAACTATGTATTGATTTAAATTTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAACTCCAATCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTTTTGGTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCATTTCACCTCCAATGGCGTTTGTTTTTTGGTAGCTCTTTTCAAA]
[+] EMBL BM599726             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAATCCTTTCGCTTACACTGCTTAACTCCAATCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTT                                                                                                                                                                                                                                                  ]




>consensus_8893#0
CTCAGTAGTTTAATCAATTTTGCTTTGCATCTTTGTTAAATCGTTTGTATTGAGGTTTGT
TTGCTCTTTTTGTTTTTGGTTTTATTTTCCCATTTTGCTTCAGGATTGGGCTTCAGGATG
TGGTCAGTTATTGCCTTTTCTTTAGGCACCGCAAAACAAAGGCACACAAAACCTACACGA
CAACACACAGACACACAAACGCAAGCAAACAAAACAACAGCAAGCAAAGGAAGGAACAGC
TGAAATGGGAATAGTAAACTAAAGCGTAAAATACCCTCACAATCACCACCAACCCTAGTG
CACCTAGTTATGACTTACACACCCGGAGAAAGATTATTAGTAAGTGCTAGGATACGATAA
GCTATAAAACGTATGCCCGTCCCGTGGGTGAAAAAAAGGAACAAAACGTGGAGTAAACGC
AAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGC
AGGCAGAGCAGAGATGTGAAGAAGTAGTGAGGTAGTAGAAGAAGAAAAGAAAAACAAACA
AAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGTTAAGCGAATTTGTTTTG
TTTTTGTTTTTGTTTTTCGTTTTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCAGCT
TTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCGCCTCTCCCCAT
TTGTTGCTTCTCTAATAGCTCTTTAAGGTGTTTCTTCTCCCTTCTCAACTTTTTAGTGTT
CTTGCGGTAAAGAAGAAATCTATCTATTATTATCTTGTATTTAACAAATGTTATGTATTA
TTTCTTTACGTTTTGGCATATATTAGTTTTCTCTCATTTTCCTTTTGTTTTCGTTTCGAA
AAGTTTCAAAGATAAAAAATCTATTGGCAAAAAAACAGTCTTAGCATAGGTTTATCCAAA
TTTACACTGCTCCAAATGGATTCGATTGCGAAAGCAACAAAACTATGTATTGATTTAAAT
TTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAA
CTCCAATCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACC
TGTTTTCCTCTTCTTTTGTTGGTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGA
TTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGGTTTCCGCTTTTCCCACACTT
TTTTTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGA
TAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCATTTCACCTCCAATGGCGTTTGTTTTT
TGGTAGCTCTTTTCAAA

consensusID : consensus_8893#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1058
fasta sequence

                              [CGACCCACGCGTCCGCCCACGCGTCCGAAATTTACACTGCTCCAAATGGATTCGATTGCGAATGCAACAAATCTATGTATTGGTTTAAATTTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAACTCCATTCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGGTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCTTTTCACCTCCAATGGCGTTTGTTTTTGGTAGCTC-TTTTCAAAAGTAAACAAAGGCAAGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGAAAGAGAAATGCGTTAATGGGCAATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAGAACAACAACTTAAAACTCAT-CCC-CCCCAT-TACACTCAGTGTACGAACATGTTCT-GT-TGCAGGACACACAAACACACACACAAGAAAAGACAACCGAAGAGGGAACGCGAGTAGTAAAAAACGGCG-AA-GGAAAGCAAACGCGCATAACTAAGACGAAACTTACGAGCATTCATCCATTCTTTGAGTTTACTAACCTGTTTTTCCCCCCCGGCCCTTAATTCTATTATATTATAACTATCGTCTGTCACATTACAAACTCACTCACTCTCTTGTCAAAAATACACACACAAACACAAACTATGCAAATGCACACAGACAGAGAGAGAAAGAGAGAGACACACACACACATACATACACACACTCAAGTTAATGGAAAACAATGGCAGCGATGAAAAATAGGGAGGGGAAAAATGAAAAAGAACACAGGGCTGGNTTCGGGGNCTTTGCGTTCGTCACGATTACTACGATTACATT]

[+] EMBL BM632750             [CGACCCACGCGTCCGCCCACGCGTCCGAAATTTACACTGCTCCAAATGGATTCGATTGCGAATGCAACAAATCTATGTATTGGTTTAAATTTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAACTCCATTCTACCTTACGGATTATTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGGTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCTTTTCACCTCCAATGGCGTTTGTTTTTGGTAGCTC TTTTCGAAAGTAAACAAAGGCAAGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGAAAGAGAAATGCGTTAATGGGCAATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAGAACAACAACTTAAAACTCAT CCCTCCCCAT TACACTCAGTGTACGAACATGTTCT GT TGCAGGACACACAAACACACACACAAGAAAAGACCACCGAAGAGGGAACGCGAGTAGTAAAAAACG                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AL694176             [                                                                                                                                                   cgaggttaaTCTA CTTACGGA TATTTCTAC TTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTC TTTGTTGG TTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCG TGGTGTTTGG      ATCTCTTCTTTTCACCTCCAATGGCGTGTGTGTTTGGTAGCTCTTTTTCAAAAGTCAACAAAGGC AGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGAAAGAGAAATGCGTTAATGGGCNATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAGAACAACAACTTAAAAATCATCCCC CCCCATNTACACTCAGTGTACGAACATGTTCTCGTNTGCAGGACACACAAACACACACACAAGAAAAGANAAACGAAGAGGGAACGCGAGTAGTAAAAAACGGCGCAACGGAAAGCAAACGCGCATAACTAA                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX624838             [                                                                                                                                                                                                                                       GTTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCTTTTCACCTCCAATGGCGTTTGTTTTTGGTAGCTC TTTTCAAAAGTAAACAAAGGCAAGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGAAAGAGAAATGCGTTAATGGGCAATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAGAACAACAACTTAAAACTCAT CCC CCCCAT TACACTCAGTGTACGAACATGTTCT GT TGCAGGACACACAAACACACACACAAGAAAAGACAACCGAAGAGGGAACGCGAGTAGTAAAAAACGGCG AA GGAAAGCAAACGCGCATAATTAAGACGAAACTTACGAGCATTCATCCATTCTTTGAGTTTACTAACCTGTTTTTCCCCCCCGGCCCTTAATTCTATTATATTATAACTATCGTCTGTCACATTACAAACTCACTCACTCTCTTGTCAAAAATACACACACAAACACAAACTATGCAAATGCACACAGACAGAGAGAGAAAGAGAGAGACACACACACACATACATACACACACTCAAGTTAATGGAAAACAATGGCAGCGATGAAAAATAGGGAGGGGAAAAATGAAAAAGAACACAGGGCTGGNTTCGGGGNCTTTGCGTTCGTCACGATTACTACGATTACATT]




>consensus_8893#1
CGACCCACGCGTCCGCCCACGCGTCCGAAATTTACACTGCTCCAAATGGATTCGATTGCG
AATGCAACAAATCTATGTATTGGTTTAAATTTACGCACTAAACACTTTGCCGTGCTACCT
TATCTAAATCCTTTCGCTTACACTGCTTAACTCCATTCTACCTTACGGATTATTTCTACT
TTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGGTTTGTTTA
ACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAA
CCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCT
TACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTC
TTCTTTTCACCTCCAATGGCGTTTGTTTTTGGTAGCTCTTTTCAAAAGTAAACAAAGGCA
AGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGAAAGAGAAATGCGTTAATG
GGCAATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAGAACAACAACTTAAAA
CTCATCCCCCCCATTACACTCAGTGTACGAACATGTTCTGTTGCAGGACACACAAACACA
CACACAAGAAAAGACAACCGAAGAGGGAACGCGAGTAGTAAAAAACGGCGAAGGAAAGCA
AACGCGCATAACTAAGACGAAACTTACGAGCATTCATCCATTCTTTGAGTTTACTAACCT
GTTTTTCCCCCCCGGCCCTTAATTCTATTATATTATAACTATCGTCTGTCACATTACAAA
CTCACTCACTCTCTTGTCAAAAATACACACACAAACACAAACTATGCAAATGCACACAGA
CAGAGAGAGAAAGAGAGAGACACACACACACATACATACACACACTCAAGTTAATGGAAA
ACAATGGCAGCGATGAAAAATAGGGAGGGGAAAAATGAAAAAGAACACAGGGCTGGNTTC
GGGGNCTTTGCGTTCGTCACGATTACTACGATTACATT

consensusID : consensus_8893#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence

                              [CGACCCACGCGTCCGGTGCTAGGATACGATAAGCTATAAAACGTATGCCCGTCCCGTGGGTGAAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGCAGAGCAGAGATGTGAAGAAGTAGTGAAGTAGTAGAAGAAGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGCTAAGCGAATTTGTTTTGTTTTTGTTTTTGTTTTTCGTTTTTTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCTGCTTTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCACCTCTCCCCATTTGTTGCTTCTCTAA]

[+] EMBL BM654013             [CGACCCACGCGTCCGGTGCTAGGATACGATAAGCTATAAAACGTATGCCCGTCCCGTGGGTGAAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGCAGAGCAGAGATGTGAAGAAGTAGTGAAGTAGTAGAAGAAGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAGTAAACATAGTGGCTCCTAGCTAAGCGAATTTGTTTTGTTTTTGTTTTTGTTTTTCGTTTTTTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCTGCTTTACGATTAATAAGGAAATTGGTTAATGTTCGTTTTTACCCTCTATCCACCTCTCCCCATTTGTTGCTTCTCTAA]




>consensus_8893#2
CGACCCACGCGTCCGGTGCTAGGATACGATAAGCTATAAAACGTATGCCCGTCCCGTGGG
TGAAAAAAAGGAACAAAACGTGGAGTAAACGCAAGAGTGTAGGAAGAACAAAAAGGCGTA
AAACAAAGAGAAGAAATATAGTGTTGTGTAGCAGCAGAGCAGAGATGTGAAGAAGTAGTG
AAGTAGTAGAAGAAGAAGAAGAAAAGAAAAACAAACAAAAACAAACAAAAGTGTAGAAAG
TAAACATAGTGGCTCCTAGCTAAGCGAATTTGTTTTGTTTTTGTTTTTGTTTTTCGTTTT
TTTTTTTTGTGTAATTGTTATCACTTCGCAGTAGCTGCTTTACGATTAATAAGGAAATTG
GTTAATGTTCGTTTTTACCCTCTATCCACCTCTCCCCATTTGTTGCTTCTCTAA

consensusID : consensus_8893#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 390
fasta sequence

                              [ATCGCCAGATAATACTGTTTTCTCTTCTTTTGTGGTTGTTAACCCCGTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTGTATCTCTTCTTTTCACCTCCAATGGCGTTGGTTTACGGGTAGCTCTTTTCAAAAGTAAAACAAAGGCAAGGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGGAAACGCAGAAATGCGTTAACTGGGCAATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAAGGAAC]

[+] EMBL AL695732             [ATCGCCAGATAATACTGTTTTCTCTTCTTTTGTGGTTGTTAACCCCGTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTGTATCTCTTCTTTTCACCTCCAATGGCGTTGGTTTACGGGTAGCTCTTTTCAAAAGTAAAACAAAGGCAAGGTAGGAAAGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGGAAACGCAGAAATGCGTTAACTGGGCAATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAAGGAAC]




>consensus_8893#3
ATCGCCAGATAATACTGTTTTCTCTTCTTTTGTGGTTGTTAACCCCGTTTGCCCCTTATT
GTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTTTCCCGCTTT
TCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACTGTTCACTTA
CTTCTGTAGATAAGCTCGTTGGTGTTGTATCTCTTCTTTTCACCTCCAATGGCGTTGGTT
TACGGGTAGCTCTTTTCAAAAGTAAAACAAAGGCAAGGTAGGAAAGCTTAGGTACGTAGA
CGAAAGCTGCAGCTTAGGAAACGCAGAAATGCGTTAACTGGGCAATAATTTAGAAGCAGA
CGCAAACATAATAAAATAAAACAAAGGAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8893#1      ------------------------------------------------------------
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      CTCAGTAGTTTAATCAATTTTGCTTTGCATCTTTGTTAAATCGTTTGTATTGAGGTTTGT 60
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      ------------------------------------------------------------
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TTGCTCTTTTTGTTTTTGGTTTTATTTTCCCATTTTGCTTCAGGATTGGGCTTCAGGATG 120
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      ------------------------------------------------------------
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TGGTCAGTTATTGCCTTTTCTTTAGGCACCGCAAAACAAAGGCACACAAAACCTACACGA 180
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      --------------------------------------------CGACCCACGCGTCCGC 16
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      CAACACACAGACACACAAACGCAAGCAAACAAAACAACAGCAAGCAAAGGAAGGAACAGC 240
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      CCACGCGTCCGAAATTTACACTGCTCCAAATGGATTCGATTGCGAATGCAACAAATCTAT 76
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TGAAATGGGAATAGTAAACTAAAGCGTAAAATACCCTCACAATCACCACCAACCCTAGTG 300
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      GTATTGGTTTAAATTTACGCACTAAACACTTTGCCGTGCTACCTTATCTAAATCCTTTCG 136
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      CACCTAGTTATGACTTACACACCCGGAGAAAGATTATTAGTAAGTGCTAGGATACGATAA 360
consensus_8893#2      ----------CGACCCACGCGTCCGG------------------TGCTAGGATACGATAA 32
                                                                                  

consensus_8893#1      CTTACACTGCTTAACTCCATTCTACCTT----ACGGATTATTTCTACTTTGTAAATGTTA 192
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      GCTATAAAACGTATGCCCGTCCCGTGGGTGAAAAAAAGGAACAAAACGTGGAGTAAACGC 420
consensus_8893#2      GCTATAAAACGTATGCCCGTCCCGTGGGTGAAAAAAAGGAACAAAACGTGGAGTAAACGC 92
                                                                                  

consensus_8893#1      TTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGGTTTGTTTAACCCCGTTTTGC 252
consensus_8893#3      ---ATCGCCAGATAATACTGTTTTC-TCTTCTTTTGT-GGTTG--TTAACCCCGTTT-GC 52
consensus_8893#0      AAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGC 480
consensus_8893#2      AAGAGTGTAGGAAGAACAAAAAGGCGTAAAACAAAGAGAAGAAATATAGTGTTGTGTAGC 152
                         *  *    *            * *        *          **     ** * **

consensus_8893#1      CC-CTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTT 311
consensus_8893#3      CC-CTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGGCAGGAGAACCCGGAAGGTT 111
consensus_8893#0      AGGCAGAGCAGAGATGTGAA-GAAGTAGTG--AGGTAGTAGAAGAAGAA------AAGAA 531
consensus_8893#2      AG-CAGAGCAGAGATGTGAA-GAAGTAGTG--AAGTAGTAGAAGAAGAAGAAGAAAAGAA 208
                         *  *      ** ***  *   *****  * **  * * ** ****      * *  

consensus_8893#1      TCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACT 371
consensus_8893#3      TCCCGCTTTTCCCACACTTTTATTTTCTTTCTTACTCTTACATTTCTCTTACTCGCTACT 171
consensus_8893#0      AAACA-------AACAAAAACAAACAAAAGTGTAG----AAAGTAAACATAGTGGCTCCT 580
consensus_8893#2      AAACA-------AACAAAAACAAACAAAAGTGTAG----AAAGTAAACATAGTGGCTCCT 257
                         *         ***     *          **     * * *   * ** * *** **

consensus_8893#1      GTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTTTTTATCTCTTCTTTTCACC 431
consensus_8893#3      GTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTGT-------ATCTCTTCTTTTCACC 224
consensus_8893#0      AGTTAAGCGAATTTGTTT-TGTTTTTGTTTTTGTTTT-------TCGTTTTTTTTTT--G 630
consensus_8893#2      AGCTAAGCGAATTTGTTT-TGTTTTTGTTTTTGTTTT-------TCGTTTTTTTTTTTTG 309
                          *      * ***   *    * ***  **** *          * ** ****    

consensus_8893#1      TCCAATGGCGTTTGTTTTTGG-TAGCTCTTTTCAAAAGTAAA-CAAAGGCAAG-TAGGAA 488
consensus_8893#3      TCCAATGGCGTTGGTTTACGGGTAGCTCTTTTCAAAAGTAAAACAAAGGCAAGGTAGGAA 284
consensus_8893#0      TGTAATTGTTATCACTTCGCAGTAGCAGCTTT-ACGATTAAT---AAGGAAA--TTGGTT 684
consensus_8893#2      TGTAATTGTTATCACTTCGCAGTAGCTGCTTT-ACGATTAAT---AAGGAAA--TTGGTT 363
                      *  *** *   *   **     ****   *** *  * ***    **** **  * **  

consensus_8893#1      AGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGAAAG---AGAAATGCGTTAA-TGGGCA 544
consensus_8893#3      AGCTTAGGTACGTAGACGAAAGCTGCAGCTTAGGAAACGCAGAAATGCGTTAACTGGGCA 344
consensus_8893#0      AATGTTCGTTTTTACCCTCTATCCGCCTCTCCCCATTT--GTTGCTTCTCTAATAGCTCT 742
consensus_8893#2      AATGTTCGTTTTTACCCTCTATCCACCTCTCCCCATTT--GTTGCTTCTCTAA------- 414
                      *   *  **   **  *   * *  *  **    *          * *  ***       

consensus_8893#1      ATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAGAACAACAACTTAAAACTCA 604
consensus_8893#3      ATAATTTAGAAGCAGACGCAAACATAATAAAATAAAACAAAGG-AAC------------- 390
consensus_8893#0      TTAAGGTGTTTCTTCTCCCTTCTCAACTTTTTAGTGTTCTTGCGGTAAAGAAGAAATCTA 802
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      TCCCCCCCATTACACTCAGTGTACGAACATGTTCTGTTGCAGGACACACAAACACACACA 664
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TCTATTATTATCTTGTATTTAACAAATGTTATGTATTATTTCTTTACGTTTTGGCATATA 862
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      CAAGAAAAGACAACCGAAGAGGGAACGCGAGTAGTAAAAAACGGCGAAGGAAAGCAAACG 724
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TTAGTTTTCTCTCATTTTCCTTTTGTTTTCGTTTCGAAAAGTTTCAAAGATAAAAAATCT 922
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      CGCATAACTAAGACGAAACTTACGAGCATTCATCCATTCTTTGAGTTTACTAACCTGTTT 784
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      ATTGGCAAAAAAACAGTCTTAGCATAGGTTTATCCAAATTTACACTGCTCCAAATGGATT 982
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      TTCCCCCCCGGCCCTTAATTCTATTATATTATAACTATCGTCTGTCACATTACAAACTCA 844
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      CGATTGCGAAAGCAACAAAACTATGTATTGATTTAAATTTACGCACTAAACACTTTGCCG 1042
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      CTCACTCTCTTGTCAAAAATACACACACAAACACAAACTATGCAAATGCACACAGACAGA 904
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TGCTACCTTATCTAAATCCTTTCGCTTACACTGCTTAACTCCAATCTACCTTACGGATTA 1102
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      GAGAGAAAGAGAGAGACACACACACACATACATACACACACTCAAGTTAATGGAAAACAA 964
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TTTCTACTTTGTAAATGTTATTTAATGTAGTAAATACCTGTTTTCCTCTTCTTTTGTTGG 1162
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      TGGCAGCGATGAAAAATAGGGAGGGGAAAAATGAAAAAGAACACAGGGCTGGNTTCGGGG 1024
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      TTTGTTTAACCCCGTTTTGCCCCTTATTGTGAATATGATTGGTATAGTGTTAAGTGCTGG 1222
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      NCTTTGCGTTCGTCACGATTACTACGATTACATT-------------------------- 1058
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      CAGGAGAACCCGGAAGGGTTTCCGCTTTTCCCACACTTTTTTTTTCTTTCTTACTCTTAC 1282
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      ------------------------------------------------------------
consensus_8893#3      ------------------------------------------------------------
consensus_8893#0      ATTTCTCTTACTCGCTACTGTTCACTTACTTCTGTAGATAAGCTCGTTGGTGTTTTGTTT 1342
consensus_8893#2      ------------------------------------------------------------
                                                                                  

consensus_8893#1      -------------------------------------------------------
consensus_8893#3      -------------------------------------------------------
consensus_8893#0      TTTATCTCTTCATTTCACCTCCAATGGCGTTTGTTTTTTGGTAGCTCTTTTCAAA 1397
consensus_8893#2      -------------------------------------------------------