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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8920#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1204 fasta sequence
[TGTGCCCTTTTTTTTTTTTTTTTTAGGGATAAAAGATGAATTTATTTGCAACACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT-C-GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG-ACATCGTCCAGGTTTTGCGTG-AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA-TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT-CAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG-TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG-CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT-CGCACGGCGTGAACCTTTTTTTTACCCATTTGGCCAAAAGTTCTCGAGGAATTCCCACCTTTTTTATAAAAAAATTTTCTCTACCGCCAAAAGAAAGGGAACACCCCGAAAGACACGCTCTGAATGCCCCAACCGGGGCGGGACGGAAAAAAAAAAAAAAACAAACGGCCCCGAAGGGGGAAGGA]
[-] EMBL CNS092IH [TGTGCCCTTTTTTTTTTTTTTTTTAGGGATAAAAGATGAATTTATTTGCAACACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACA TTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGCTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAG TGCGCGTGTGCAGCGACGGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTGAACCTTTGTTaccaaac ]
[+] EMBL CNS08Q38 [ TTTTTTTTTTTACGCCTAAAAGATGAATTTATTTGCAAAACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTCCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAGCTGCGCGTGTTCAGCGACA CCCCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATTTTCTTTTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGAATGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTTTCCTGCACCTCGG TGACGCGCGCCAACACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTG ]
[+] EMBL CNS092II [ AAAAGATGAATTTATTTGC ACACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGCTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCA CTTGCCGTACTT CAAGCTGCGCGTGTTCAGCGACGGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTGGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTTCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTTAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTTAGC ]
[+] EMBL CNS09430 [ AACACCCCCTCACACCCCCAACACCCCCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCC C GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGCCCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AA CCTCCCCCTTCGCCTCCTTCACTGTTCATCATCGGGGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCA CTTGCCGTACTT CAAGCTGCGCGTGTTCA ]
[-] EMBL CNS08HMQ [ CACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACAC TCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGAAGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTTCCAAG TGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAAAAAAAGTCAACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCGACCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTG ]
[-] EMBL CNS08Q37 [ CTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT CGGGACA TTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAG TGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGGCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTGAAC ]
[-] EMBL CNS0942Z [ TCCTGGTGCAGCACCTCC GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGCTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAG TGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTGAACC TTTGTTTACCCA ]
[+] EMBL CNS08HMR [ CTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGTTGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGTACATCGTCCAGGTTTTGCGTGTAAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTTTTAAAGTGCTTATTTTGCCGCTGTATCAGAAAAAGAAAAAAAAAAAAAAAAATGCCCTGCGCCACCTTGCCGGACTT CAAGCGGCGCGGGTGCAGCGACAG GCCCCGTCCGAGTGGACGTTCTGCACCCCGGCCGAGAATAGATCGCCCCCCTGCAGGGACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTGGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTTTTTGCGCGCCAACACCAAGTCCCCGATTTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGGGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTTAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATAAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTTAATAGACGCTGGCTTTTGCTTTCATCGCTGAAGAGTGGAATTTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTTCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAA CGAGTGACTTAACCCTT TGCACGGCGTAAACCTTTTTTTTACCCATTTGGCCAAAAGTTCTCGAGGAATTCCCACCTTTTTTATAAAAAAATTTTCTCTACCGCCAAAAGAAAGGGAACACCCCGAAAGACACGCTCTGAATGCCCCAACCGGGGCGGGACGGAAAAAAAAAAAAAAACAAACGGCCCCGAAGGGGGAAGGA]
[-] EMBL BM593303 [ CGAGATCCAAATGAACCCCATTGTTGCCCAGTATAATCGATGCACCGCACGGTAGATTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCACGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTAAACAAAAAAAGGAAGTAGAATCGAGCGACAGAGCCCcg g ]
[-] EMBL BM618585 [ TTGTTGCCCAGTATAATCGACGCACCGCACGGCAGATTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGTATGCCCTGCGCCAGCTTGCCGTACTT CAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCATTGCTGCAGGA CGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCCGGAC GCGTGggcgg ]
consensusID : consensus_8920#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 894 fasta sequence
[TTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTTCAAGTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCCACGGCGTGAACCTTTGTGGCCAAACCCAG]
[-] EMBL CNS0961Y [TTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTTCAAGTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCCACGGCGTGAACCTTTGTGGCCAAACCCAG]
[+] EMBL CNS0961Z [ TCGGGGAAATCCAAATGAATCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAAAATGCCCTGCG ]
consensusID : consensus_8920#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[CGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCCAGTATGCCCTGCGCCAGCTTTGCCGTACTTCAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCATTGCTGCAGGACGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCGCACGGCGCCCACGCGTCCGCGG]
[-] EMBL BM584033 [CGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCCAGTATGCCCTGCGCCAGCTTTGCCGTACTTCAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCATTGCTGCAGGACGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCGCACGGCGCCCACGCGTCCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8920#0 TGTGCCCTTTTTTTTTTTTTTTTTAGGGATAAAAGATGAATTTATTTGCAACACTCTGAA 60
consensus_8920#1 ------------------------------------------------------------
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 CACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCA 120
consensus_8920#1 ------------------------------------------------------------
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 TGCATTCCTGGTGCAGCAGCTCGGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACA 180
consensus_8920#1 -----------------------------------TTTTGCGACTCCTCGTACGCGTACA 25
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 GTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGA 240
consensus_8920#1 GTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGA 85
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 GCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGC 300
consensus_8920#1 GCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGC 145
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 CTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGC 360
consensus_8920#1 CTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGC 205
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 CCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCA 420
consensus_8920#1 CCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCA 265
consensus_8920#2 ----------------------------------------CGTTTTGCGCCGCTGTATCA 20
********************
consensus_8920#0 GCGACGGGAACACCTTCACC-AGAATGCCCTGCGCCAGCTT-GCCGTACTTCAAGCTGCG 478
consensus_8920#1 GCGACGGGAACACCTTCACC-AGAATGCCCTGCGCCAGCTT-GCCGTACTTCAAG-TGCG 322
consensus_8920#2 GCGACGGGAACACCTTCACCCAGTATGCCCTGCGCCAGCTTTGCCGTACTTCAAGCTGCG 80
******************** ** ***************** ************* ****
consensus_8920#0 CGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATC 538
consensus_8920#1 CGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATC 382
consensus_8920#2 CGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATC 140
****************************************************** *****
consensus_8920#0 GCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTC 598
consensus_8920#1 GCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTC 442
consensus_8920#2 GCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTC 200
************************************************************
consensus_8920#0 GCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTC 658
consensus_8920#1 GCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTC 502
consensus_8920#2 GCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTC 260
************************************************************
consensus_8920#0 CACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACG-TCCCCGATCT 717
consensus_8920#1 CACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACG-TCCCCGATCT 561
consensus_8920#2 CACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGGTCCCCGATCT 320
************************************************* **********
consensus_8920#0 CGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCA 777
consensus_8920#1 CGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCA 621
consensus_8920#2 CGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCA 380
********************************** *************************
consensus_8920#0 CGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGA 837
consensus_8920#1 CGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGA 681
consensus_8920#2 CGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGA 440
********** *************************************************
consensus_8920#0 AGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCAT 897
consensus_8920#1 AGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCAT 741
consensus_8920#2 AGCCCTGCTGGCTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCAT 500
********** *************************************************
consensus_8920#0 CGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCA 957
consensus_8920#1 CGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCA 801
consensus_8920#2 CGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCA 560
**************************************************** *******
consensus_8920#0 TTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCC 1017
consensus_8920#1 TTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCC 861
consensus_8920#2 TTGCTGCAGGA--CGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCC 618
******** * ***** ***** ***********************************
consensus_8920#0 TTCGCACGGCGTGAACCTTTTTTTTACCCATTTGGCCAAAAGTTCTCGAGGAATTCCCAC 1077
consensus_8920#1 TTC-CACGGCGTGAACCTTTGTGGC-CAAACCCAG------------------------- 894
consensus_8920#2 TTCGCACGGCGCCCACGCGTCCGCGG---------------------------------- 644
*** ******* ** *
consensus_8920#0 CTTTTTTATAAAAAAATTTTCTCTACCGCCAAAAGAAAGGGAACACCCCGAAAGACACGC 1137
consensus_8920#1 ------------------------------------------------------------
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 TCTGAATGCCCCAACCGGGGCGGGACGGAAAAAAAAAAAAAAACAAACGGCCCCGAAGGG 1197
consensus_8920#1 ------------------------------------------------------------
consensus_8920#2 ------------------------------------------------------------
consensus_8920#0 GGAAGGA 1204
consensus_8920#1 -------
consensus_8920#2 -------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||