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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8926#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2028 fasta sequence
[CCGAAGGACGTGTGCATGCTCACCGCCCGCCGGTTCTGGATCACCAACATCGACGGGCCGGCCGGCGTACTGAGGACGAAGGCGGTGCTGCTGCAGCACCTGCACCTGCAGCAGAAGCAGCAAGGCCATGCGCAACCGCCGGCTTCGTCCAGTGCCGGCGATGAGACGGATCTAGCCGGCAACGGGGGCAAAGGCGGCGGCGCGGTGGAACCGAAAGCTACGCAGCTACCGAACAATCTCGACAGTGCGGCACAACCAAACAACAACACCGGCAGCAACCGTACGCCGGAACGAAAGCCCGTCAAGTGTAACAACATCATCGGCGCGGACGTGGACGTGGCCAGCTTGAAGCGTAAATCGTTCGGCAACATTAACGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGGTGGAAGCTTTCCCTCCACGGTAGTTACTATTAATTTAATTTAATTATCAGGGGTTACACTAAAGACATCGTTTATTCGTTGCATTGCTCGGGGCTTGTCGTAGTGAGGGAAGAAACGGATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGCGTAACAGAGAGCACTGGAAACTGTTTGTGATATTGTTTTGTTTTTTAATCAGATAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA-------A-AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATACTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAACTTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTAT-AAAATACTCCATCTTTTCTCGTGCGGGCAGATGCAGTCGTCGAGCAGAAGGAAAAGCAAGAGAGATTGTTGAAAGAGTAG]
[+] EMBL BM598724 [CCGAAGGACGTGTGCATGCTCACCGCCCGCCGGTTCTGGATCACCAACATCGACGGGCCGGCCGGCGTACTGAGGACGAAGGCGGTGCTGCTGCAGCACCTGCACCTGCAGCAGAAGCAGCAAGGCCATGCGCAACCGCCGGCTTCGTCCAGTGCCGGCGATGAGACGGATCTAGCCGGCAACGGGGGCAAAGGCGGCGGCGCGGTGGAACCGAAAGCTACGCAGCTACCGAACAATCTCGACAGTGCGGCACAACCAAACAACAACACCGGCAGCAACCGTACGCCGGAACGAAAGCCCGTCAAGTGTAACAACATCATCGGCGCGGACGTGGACGTGGCCAGCTTGAAGCGTAAATCGTTCGGCAACATTAACGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGC ]
[+] EMBL BX602757 [ gcAAATCGTTCGGCAACATTAGCGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGGTGGAAGCTTTCCCTCCACGGTAGTTACTATTAATTTAATTTAATTATCAGGGGTTACACTAAAGACATCGTTTATTCGTTGCATTGCTCGGGGCTTGTCGTAGTGAGGGAAGAAACGGATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGA ]
[+] EMBL BX608005 [ TTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGGTGGAAGCTTTCCCTCCACGGTAGTTACTATTAATTTAATTTAATTATCAGGGGTTACACTAAAGACATCGTTTATTCGTTGCATTGCTCGGGGCTTGTCGTAGTGAGGGAAGAAACGGATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACC ]
[+] EMBL BX621619 [ GATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGCGTAACAGAGAGCACTGGAAACTGTTTGTGATATTGTTTTGTTTTTTAATCAGATAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACT ]
[+] EMBL BX625675 [ GATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGCGTAACAGAGAGCACTGGAAACTGTTTGTGATATTGTTTTGTTTTTTAATCAGATAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTTGTTTGTTTTANGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCNAGTCCAGTGCAGCATTATTGGGTATGA ]
[+] EMBL BM575898 [ ccgGTGGAAGTG TTT TTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACATGGTACCGACGAAATGTGGTTTGGTGTAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGTTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCTAGTGCGATTGGGCACTGATATATAACACAGAACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGTGTCCACCCCTTCTCTAGGTAGTATGATAAGAACTTATTCCGTCTGACACAACTTTTCATGCTACAGCCCGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATGGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCACACATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAACAACAAAAAGAAGGGAAACGATTTGTTTTTCCCCCCTGACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAA ]
[+] EMBL BX624678 [ GGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATACTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAACTTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTAT AAAATACT ]
[+] EMBL BX603754 [ CAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATAC ]
[+] EMBL BX623789 [ AGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATACTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAACTTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTATAAAAATACTCCATCTTTTCTCGTGCGGGCAGATGCAGTCGTCGAGCAGAAGGAAAAGCAAGAGAGATTGTTGAAAGAGTAG]
consensusID : consensus_8926#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 744 fasta sequence
[CGAGGTTAATCTTTGAAGCTGAACAACACTAATAACAATAATAACAACATTTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGCGCTGGAAGCTTTCCCTCCACGGTAGCTTACTACTTAATTTAACTTTAATTATCACCGGGTTACACTANACAGCACATCGCTTTATTCGTTGCATTGCTCGGGGCTTGTCGTACGTGAGGGAAGAACACGGATACTATACTATAGTCTGTNATGTNGTAGTACTTCGCTTNCTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGCGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGACCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTCTCGTACAAACGATCAAATAGGACCACCGGCAACAAGCTGTGTGGTTCGCGCGTAACCAGAGAGCACTGGAAACTGTTTAGTGATATAGNAAAAGTAGAACAAAATCNAGAATAGTAAATGCCGACCAGCATTNGCCGNTGAATATTTCAGAGAATGTTGGNCGNCGTCGCGTGCGCGGTTTTATCTTCATCNTCGTATTAATCCTCATGTTTCCATGTTATCACAAGTTCGCN]
[+] EMBL AL931577 [CGAGGTTAATCTTTGAAGCTGAACAACACTAATAACAATAATAACAACATTTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGCGCTGGAAGCTTTCCCTCCACGGTAGCTTACTACTTAATTTAACTTTAATTATCACCGGGTTACACTANACAGCACATCGCTTTATTCGTTGCATTGCTCGGGGCTTGTCGTACGTGAGGGAAGAACACGGATACTATACTATAGTCTGTNATGTNGTAGTACTTCGCTTNCTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGCGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGACCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTCTCGTACAAACGATCAAATAGGACCACCGGCAACAAGCTGTGTGGTTCGCGCGTAACCAGAGAGCACTGGAAACTGTTTAGTGATATAGNAAAAGTAGAACAAAATCNAGAATAGTAAATGCCGACCAGCATTNGCCGNTGAATATTTCAGAGAATGTTGGNCGNCGTCGCGTGCGCGGTTTTATCTTCATCNTCGTATTAATCCTCATGTTTCCATGTTATCACAAGTTCGCN]
consensusID : consensus_8926#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence
[CAGTATGTAACGTTAACGTTGTTAACCAGCCACCGAGCAAGTGTTGACATGAGGAAAAACCTTTTCGGATTTTTCGTACAAATGATCAAATAGGAGCCCTGCAACAAGGTGTGTGGTTCGTTCGTAACAGAGAGAACTGGAAACTGTTTGTGATATTGTTTTTCATTTTTTTTTAAATCAGTTAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGCGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTGTCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGTTTTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACATGGTACCGACGAAATGTGGTTTGGTGTAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGTTAGATACTTTAACAACT]
[+] EMBL BX626964 [CAGTATGTAACGTTAACGTTGTTAACCAGCCACCGAGCAAGTGTTGACATGAGGAAAAACCTTTTCGGATTTTTCGTACAAATGATCAAATAGGAGCCCTGCAACAAGGTGTGTGGTTCGTTCGTAACAGAGAGAACTGGAAACTGTTTGTGATATTGTTTTTCATTTTTTTTTAAATCAGTTAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGCGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTGTCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGTTTTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACATGGTACCGACGAAATGTGGTTTGGTGTAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGTTAGATACTTTAACAACT]
consensusID : consensus_8926#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[GAATCCCGAGGTAAGCATGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTCCGTCGGCGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAAAGATACGAGAGAGAGAGCGTTGCGTTAGACCGCTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATAGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTAGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCGTTACCTTCGGCCAGCGGTCCACCCCTTACTNAGGTAAGCTATG]
[+] EMBL AL933668 [GAATCCCGAGGTAAGCATGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTCCGTCGGCGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAAAGATACGAGAGAGAGAGCGTTGCGTTAGACCGCTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATAGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTAGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCGTTACCTTCGGCCAGCGGTCCACCCCTTACTNAGGTAAGCTATG]
consensusID : consensus_8926#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence
[AGGCCAGAACTCGGCACGTAGGCTTTAACAACTTCTCAAGTCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGGTTCGCTGCTTTTCTTTCGCAGCGGTCANCCCTTCTTTAGGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGGCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGAGTCTAAAACATCGATAGGCCAAGCGTCTTCCCTTAGAGCTTTACTTATTGCGGAGCAGCAGAAGAGAACGT]
[+] EMBL BX468369 [AGGCCAGAACTCGGCACGTAGGCTTTAACAACTTCTCAAGTCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGGTTCGCTGCTTTTCTTTCGCAGCGGTCANCCCTTCTTTAGGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGGCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGAGTCTAAAACATCGATAGGCCAAGCGTCTTCCCTTAGAGCTTTACTTATTGCGGAGCAGCAGAAGAGAACGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CCGAAGGACGTGTGCATGCTCACCGCCCGCCGGTTCTGGATCACCAACATCGACGGGCCG 60
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 GCCGGCGTACTGAGGACGAAGGCGGTGCTGCTGCAGCACCTGCACCTGCAGCAGAAGCAG 120
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CAAGGCCATGCGCAACCGCCGGCTTCGTCCAGTGCCGGCGATGAGACGGATCTAGCCGGC 180
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 AACGGGGGCAAAGGCGGCGGCGCGGTGGAACCGAAAGCTACGCAGCTACCGAACAATCTC 240
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 GACAGTGCGGCACAACCAAACAACAACACCGGCAGCAACCGTACGCCGGAACGAAAGCCC 300
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 GTCAAGTGTAACAACATCATCGGCGCGGACGTGGACGTGGCCAGCTTGAAGCGTAAATCG 360
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ---------------------------------CGAGGTTAATCTTTGAAGCTGAACAAC 27
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 TTCGGCAACATTAACGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAAC 420
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ACTAATAACAATAATAACAACATTTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAG 87
consensus_8926#2 -----------------CAGTATGTAACG-TTAACGTTGTTAACCAGCCACCG-AGCAAG 41
consensus_8926#0 AATAATAACAATAATAACAACAT-TAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAG 479
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 CAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGT-AGA 146
consensus_8926#2 TGTTGACATGAGGAAAAACCTTTTCGGATTTTTCG----TACAAATGATCAAATA--GGA 95
consensus_8926#0 CAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGA 539
consensus_8926#3 -----GAATCCCGAGGTAAGCATGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGC 55
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 GCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGCGCTGGAAGC 206
consensus_8926#2 GCCCTGCAACAAGGTGT----GTGGTTCGTTCGTAA------CAGA-GAGAACTGGAAAC 144
consensus_8926#0 GCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATA--TGCGGTGGAAGC 597
consensus_8926#3 GTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGT 115
consensus_8926#4 -------------------------------------------------AGGCCAGAACT 11
*
consensus_8926#1 TTTCCCTCCACGGTAGCTTACTACTTAATTTAACTTTAATTATCACCGGGTTACACTANA 266
consensus_8926#2 TGTTT-------GTGATATTGTTTTTCATTTTTTTTTAA--ATCAGTTAGTAATGCCGT- 194
consensus_8926#0 TTTCCCTCCACGGTAGT-TACTA-TTAATTTAA-TTTAATTATCAG-GGGTTACACTAAA 653
consensus_8926#3 TCGCTCTTATTTATTGTCA-TTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTCCGTCG 174
consensus_8926#4 CGGCACGTAGGCTTTAACAACTTCTCAAGTCAGTGCA---GCATTATTGGGTATGAATTA 68
* * *
consensus_8926#1 CAGCACATCGCTTTATTCGTTGCATTGCTCGGG-GCTTGTCGTACGTGAGGGAAGAACAC 325
consensus_8926#2 CAGC------CATTGCCCGTTGATTTTCGCGAATGTTGGCCGTTCGTT---------CGC 239
consensus_8926#0 GACATC----GTTTATTCGTTGCATTGCTCGGG-GCTTGTCGTA-GTGAGGGAAGA-AAC 706
consensus_8926#3 GCGTTTT--AGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGG--CA 230
consensus_8926#4 AGGCAAA--ATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGA--TT 124
*
consensus_8926#1 GGATACTATACTATAGTCTGTNATGTNGTAGTACTT-CGCTTNCTGCTGTTATGTCTATC 384
consensus_8926#2 GTGCGCGGTTTTATCTTCATCCTCGTAGTTAAAT-----CCTCATGTTTCCATGT-TGTC 293
consensus_8926#0 GGATACTATACTATAGTCTGTAATGTTGT-GTACT----TCGTTTGCTGTTATGTCTATC 761
consensus_8926#3 AACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAA--AGA 288
consensus_8926#4 GGGCACTGATATAT--AATACAGCACAGAAGTAATA-GGTTCGCTGCTTTTCTTT--CGC 179
* ** * * **
consensus_8926#1 ATTGGTT-GCGCATACACTGCTGTTATAGATGTGAGCGAAACGCCAACAGTATGGAAACG 443
consensus_8926#2 ACCAGTTCGCTCTTAT-TTATTGTCAT-----TCCGCAGGTTGATTTAAGTGTGGAAGTG 347
consensus_8926#0 ATTGGTT-GCGCATACACTGCTGTTATAGATGTGAG-GAAACGCCAACAGTATGGAAACG 819
consensus_8926#3 TACGAGA-GAGAGAGCGTTGCGTTAGAC----CGCTAACAAAAGCTAGATACTTTAACAA 343
consensus_8926#4 AGCGGTC-ANCCCTTCTTTAGGGTAGTA----TGGTAAGAACTTATTCCGTCTGACACAA 234
* * * *
consensus_8926#1 TTAATGATGTTACCTAGACCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAA 503
consensus_8926#2 TTTTTTGTTTGTTTTAGG--ATTAAATATGTATT-ACTTTTACATCTACTTGCGTCCGCT 404
consensus_8926#0 TTAATGATGTTACCTAGCC-ACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAA 878
consensus_8926#3 CTTCTCAAGTC---CAG--TGCAGCATTATAGGGTATGAATTAAGGCAAAATGGGAAGCT 398
consensus_8926#4 CTTTTCATGCTG--CAGGCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGAGTCT 292
* * ** * *
consensus_8926#1 AGGATTTCTCGTACAAACGATCAAATAGGACCACCG-GCAACAAGCTGTGTGGTTCGCGC 562
consensus_8926#2 AGAGGCAAACAACTAAGAAATCAAACATGGT-ACCG-ACGAAA-----TGTGGTTTG-GT 456
consensus_8926#0 AGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGC 938
consensus_8926#3 ATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTAGGGCACTGATATATAATACA 458
consensus_8926#4 A--AAACATCG----ATAGGCCAAGCGTC---TTCCCTTAGAGC-TTTACTTATTGCGGA 342
* * * * * *
consensus_8926#1 GTAACCAGAGAGCACTGGAAACTGTTTAGTGATATAGNAAAAGTAGAACAAAATCNAGAA 622
consensus_8926#2 GTAACAAGACAGAGAGAGAGA-------GAGAGAGAGAGAGCGTTGCGTTAGACCG---T 506
consensus_8926#0 GTAAC-AGAGAGCACTGGAAACTGTTT-GTGATATTGT---TTTGTTTTTTAATCA--GA 991
consensus_8926#3 GCA-CAGAAGTAATAGTTCGCTGCGTTACCTTCGGCCAGCGGTCCACCCCTTACTNAGGT 517
consensus_8926#4 GCAGCAGAAGAGAACGT------------------------------------------- 359
* * * *
consensus_8926#1 TAGTAAATGCCGACCAGCATTNGCCGNTGAATATTTCAGAGAATGTTGGNCGNCG--TCG 680
consensus_8926#2 TAACAAAAGTTAGATA-CTTTAACAACT-------------------------------- 533
consensus_8926#0 TAGTAA-TGCCGTCAGCCATTGCCCGTTGA---TTTTCGTGAATGTTGGCCGTTCGTTCG 1047
consensus_8926#3 AAGCTATG---------------------------------------------------- 525
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 CGTGCGCGGTTTTATCTTCATCNTCGTATT--AATCCTCATGTTTCCATGTTATCACAAG 738
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAG 1107
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 TTCGCN------------------------------------------------------ 744
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 TTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTT 1167
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 GTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAA 1227
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAAAGATAGA 1287
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 GAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGT 1347
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAAT 1407
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 ACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGT 1467
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 TCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTC 1527
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTA 1587
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 ATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAG 1647
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAA 1707
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTC 1767
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATA 1827
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 CTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAAC 1887
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 TTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTA 1947
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ------------------------------------------------------------
consensus_8926#2 ------------------------------------------------------------
consensus_8926#0 TAAAATACTCCATCTTTTCTCGTGCGGGCAGATGCAGTCGTCGAGCAGAAGGAAAAGCAA 2007
consensus_8926#3 ------------------------------------------------------------
consensus_8926#4 ------------------------------------------------------------
consensus_8926#1 ---------------------
consensus_8926#2 ---------------------
consensus_8926#0 GAGAGATTGTTGAAAGAGTAG 2028
consensus_8926#3 ---------------------
consensus_8926#4 ---------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||