cluster # 8932

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Anopheles gambiae
cluster # 8932 cluster # 8932 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8932#0 length = 1534 sequences # 10

consensus_8932#1 length = 655 sequences # 2
consensus_8932#2 length = 418 sequences # 1

consensusID : consensus_8932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1534
fasta sequence

                              [TTGGTTATCCAGCTTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACTGCAAATATCCTGTTATTTTTTGCCCATTGCCCAGNAAGCAGTTTTGATCAGTTTTAGGAGGTTCCCTCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTAGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCAATGCACTGTGCCAGAACACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTGTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACG-AAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCACACCT-CCTCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATTTGATGTTGTTACATGTTGTTGTTACTTTAGTTTAAGTTGTAATCCTTAATTAACTATTAATGATTAATCTATCCCGCCCCGGTGCACGTTGTGTTTTTAGTAGTTTAATAAGATATGGCTGCAGTGAGATCAAACACAACAGGCGATAACATGTGTACGCAAAAGTAGATAGAGAGAGAAAGAGAAAACGAATGCGTTAACACAGGAAACAAATGAATGAGAGAAAGCTTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTTGTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCA-TTTTTCCCATGTAATAGTGCGTCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCA-TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTTGGAAAAAGTTGAAAAATAAACATATAAAGGCAAAA-TCCTCCGCGCGCTTAACGCAACGCTCCCCATCAGTCACCTCCCCCTCCGGAGACTACTAACGCAAGAAGTC-TTTTTTATATTTTAGTTTACTTTCGATTTAGTATATTTTGTAAAAAAAAATACAGTGTGTTTTGAATACAGCAAATGAAATAAAATGAAACAAACAACCAT]

[+] EMBL BX620255             [TTGGTTATCCAGCTTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACTGCAAATATCCTGTTATTTTTTGCCCATTGCCCAGNAAGCAGTTTTGATCAGTTTTAGGAGGTTCCCTCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTAGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCAATGCACTGTGCCAGAACACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTGTAAGGATATAAAGTGAGAGACNATTAGCATAAAGCAACGAAAGAACG AAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCNCACCTNCCCCCTATATCCCTATCCCGCTCCATTCCTTTATGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX620052             [                                                                                                                            GAGGTTCCCTCAGTTTCTCACAAATAGAAGGGTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTGGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCAATGCACTGTGCCAGAACACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTGTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACAAAAGAACGAAAAAAAAAATTCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCACACCT CCTCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATTTGATGTTGTTACATGTTGTTGGTACTTTAGTTTAAGTTGTAATCCTTAATTAACTATTAATGATTAATCTATCCCGCCCCGGTGCACGTTGTGGTTTTAGTAGTTTAATAAGATATGGCTGCAGTGAGATCNAACACCACAGGCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX619979             [                                                                                                                                                                                                                                                                                                                                 CGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCAATGCACTGTGCCAGAACACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTGTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACG AAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCACACCT CCCCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATTTGATGTNGTNACATGTNGTTGTNACTTTAGTNTAAGTTGTAATCCTTAATTAACTATNANTGATTAATCTATCCCGCCCCGGTGCACGTTGTGTTTTTAGTAGTTTAATAAGATATGGCTGCAGTGAGATCAAACACAACAGGCGATAACATGTGTACGCNAAAGTAGATAGAGAGAGAAAGAGAAAACGAATGCGTTAACACAGGAAACAAnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX623104             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACTTGCAGCTAGACTACTGCACACCT CCTCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATTTGATGTTGTTACATGTTGTTGTTACTTTAGTTTAAGTTGTAATCCTTAATTAACTATTAATGATTAATCTATCCCGCCCCGGTGCACGTTGTGTTTTTAGTAGTTTAATAAGATATGGCTGCAGTGAGATCAAACACAACAGGCGATAACATGTGTACGCAAAAGTAGATAGAGAGAGAAAGAGAAAACGAATGCGTTAACACAGGAAACAAATGAATGAGAGAAAGCTTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTTGTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCA TTTTTCCCATGTAATAGTGCGTCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCA TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTTGGAAAAAGTTGAAAAATAAACATATAAAGGCAAAA TCCTCCGCGCGCTTAACGCAACGCTCCCCATCAGTCACCTCCCCCTCCGGAGACTACTAACGCNAGAAGT                                                                                                       ]
[+] EMBL BX623103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATTTGATGTTGTTACATGTTGTTGTTACTTTAGTTTAAGTTGTAATCCTTAATTAACTATTAATGATTAATCTATCCCGCCCCGGTGCACGTTGTGTTTTTAGTAGTTTAATAAGATATGGCTGCAGTGAGATCAAACACAACAGGCGATAACATGTGTACGCAAAAGTAGATAGAGAGAGAAAGAGAAAACGAATGCGTTAACACAGGAAACAAATGAATGAGAGAAAGCTTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTTGTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCA TTTTTCCCATGTAATAGTGCGTCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCA TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTTGGAAAAAGTTGAAAAATAAACATATNAAGGCAAAA TCCTCCGCGCGCTTAACGCAACGCTCCCCATCAGTCACCTCCCCCTCCGGAGACTACT                                                                                                                   ]
[+] EMBL BX617456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAGATAGAGAGATAAAGAGAAAACGAATGCGTTAACACAGGAAACAAATGAATGAGAGAAAGCTTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTTGTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCA TTTTTCCCATGTAATAGTGCGTCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCA TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTTGGAAAAAGTTGAAAAATAAACATATAAAGGCAAAATTCCTCCGCGCGCTTAACGCAA                                                                                                                                                        ]
[+] EMBL BX616147             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGAAAGCTTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTTGTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCATTTTTTCCCATGTAATAGTGCGTCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCA TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTTGGAAAAAGTTGAAAAATAAACATATAAAGGCAAAA TCCTCCGCGCGCTTAACGCAACGCTCCCCATCAGTCACCTCCCCCTCCGGAGACTACTAACGCAAGAAGTC TTTTTTATATTTTAGTTTACTTTCGATTTAGTATATTTTGT AAAAAAAATACAGTGTGTTTTGAATACAGCAAATGAAATAAAATGAAAC          ]
[+] EMBL AGA281120            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TATTTTTTGTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCATTTTTTCCCATGTAATAGTGCGTCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCATTGT AACACAAGCAGCACACTTGCGCCCGCGCTTGACTATATGAGGGAGAGGGCTCCATGGAGGGGATGCGATCAATGAATGAATGTA                                                                                                                                                                                                                                                     ]
[-] EMBL AGA282748            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATAGTGAGTCGCAACCGTCCGATCGCCCTCAATGGTTTTATCGTACGCTAATATTATTTACAATTCGTGCA TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGTGAGGGCTCGATAGAGGAGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCATCCACCTCCCTTTCGGGTTTGGAAAAAGTTGAAAAATAAACATGTAAAGGCAAAA TCCTCCGCGCGTTTAACGCAACGTTCCCCATCAGTCACCTCCCCTTCCGGAGAATACTAACGCAAGAAGTC TTTTTTATATTTTAGTTTACTTTCGAATTAGTATATTTTGTAAAAA                                                       ]
[+] EMBL BM589985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCA TGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTTGGAAAAAGTTGAAAAATAAACATATAAAGGCAAAA TCCTCCGCGCGCTTAACGCAACGCTCCCCATCAGTCACCTCCCCCTCCGGAGACTACTAACGCAAGAAGTCTTTTTTTATATTTTAGTTTACTTTCGATTTAGCATATTTTGTAAAAAAAAATACAGTGTGTTTTGAATACAGCAAATGAAATAAAATGAAACAAACAACCAT]




>consensus_8932#0
TTGGTTATCCAGCTTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTC
TTTCACTGCAAATATCCTGTTATTTTTTGCCCATTGCCCAGNAAGCAGTTTTGATCAGTT
TTAGGAGGTTCCCTCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGT
AGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAAT
TGTCTTAACTAGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAG
AGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTT
GCTTTGATACCGCAATCGATTCAATCGATTCATCAATGCACTGTGCCAGAACACTTTTTT
CACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCT
AATTGCAGCGTGTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACGA
AAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTA
GACTACTGCACACCTCCTCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGAT
GATAGCGCCTTCCTTGATTTGATGTTGTTACATGTTGTTGTTACTTTAGTTTAAGTTGTA
ATCCTTAATTAACTATTAATGATTAATCTATCCCGCCCCGGTGCACGTTGTGTTTTTAGT
AGTTTAATAAGATATGGCTGCAGTGAGATCAAACACAACAGGCGATAACATGTGTACGCA
AAAGTAGATAGAGAGAGAAAGAGAAAACGAATGCGTTAACACAGGAAACAAATGAATGAG
AGAAAGCTTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTT
GTTGGTGTTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGC
AATAGCAAAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATG
CCGCCCGGAAATTTATTATGCCCCTCCTGAGATACCCCATTTTTCCCATGTAATAGTGCG
TCGCAACCGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTT
GCATGTAAACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCG
ATGGAGGGGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTT
CGGGTTTGGAAAAAGTTGAAAAATAAACATATAAAGGCAAAATCCTCCGCGCGCTTAACG
CAACGCTCCCCATCAGTCACCTCCCCCTCCGGAGACTACTAACGCAAGAAGTCTTTTTTA
TATTTTAGTTTACTTTCGATTTAGTATATTTTGTAAAAAAAAATACAGTGTGTTTTGAAT
ACAGCAAATGAAATAAAATGAAACAAACAACCAT

consensusID : consensus_8932#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 655
fasta sequence

                              [ATGAGAGAGAAAAGAAAAGAGAGAGAGAGGCATTAA-GGTGCATTTTATTGGTTATCCAGCTTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACCGCAAATATCCTGTTATTTTTTGCCCATTGCCCAGTAAGCAGTTTTGATCAGTTTTAGGAGGTTCCCTCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTGGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTTTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACGAAAAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCACACCTCCTCCTATA]

[+] EMBL BX622118             [ATGAGAGAGAAAAGAAAAGAGAGAGAGAGGCATTAA GGTGCATTTTATTGGTTATCCAGCTTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACCGCAAATATCCTGTTATTTTTTGCCCATTGCCCAGTAAGCAGTTTTGATCAGTTTTAGGAGGTTCCCTCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTGGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTTTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACGAAAAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCACACCTCCTCCTATA]
[-] EMBL BM624845             [                  GAGAGAGAGAGGCATTAAGGGTGCATTTTATTGGTTATCCAGCTTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACCGCAAATATCCTGTTATTTTTTGCCCATTGCCCAGTAAGCAGTTTTGATCAGTTTTAGGAGGTTCCCTCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGCTAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTGGTAGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATCTAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGCAATCGATTCAATCGATTCATCACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTTTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCA                                                                                                  ]




>consensus_8932#1
ATGAGAGAGAAAAGAAAAGAGAGAGAGAGGCATTAAGGTGCATTTTATTGGTTATCCAGC
TTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACCGCAAAT
ATCCTGTTATTTTTTGCCCATTGCCCAGTAAGCAGTTTTGATCAGTTTTAGGAGGTTCCC
TCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGC
TAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTGGT
AGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATC
TAACCTAACGGTCCCTCATTATGCAATGAAGTATTACGACCCAATTTGCTTTGATACCGC
AATCGATTCAATCGATTCATCACTTTTTTCACACGTGTCACCTGGTTTGGCAAAAACCCG
ACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGCGTTTAAGGATATAAAGTGAGAG
ACAATTAGCATAAAGCAACGAAAGAACGAAAAAAAAAAATCCTATAACCTCCGGGCTTGG
AATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACTGCACACCTCCTCCTATA

consensusID : consensus_8932#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 418
fasta sequence

                              [AGATCCCCGAGGTCTAAACGCGTGTCTATTGCGCGTGTAAGGATATAAGTGAGAGACATTAGCATAAAGCAACGAAAGACGAAAAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACCTACTGGNCACTCCTCCTATATCCTATCCGTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATGATGTGTTCACATGTTTGTCTGTCACTTTAGTTTAAGTTTGTAATCCTTAATTAACTATTCAATTGATTAATCTATCCCGCCCCGGTGCACGTCTGTGTTTAGTAGTTTAATAAGATATTGGCCTGCAGTGAGATCAAACACAACAGGCTGATAACATGTGTACGCAAAAGTCAGCATAGACGAGAGAAAGAGACAAAC]

[+] EMBL AL930248             [AGATCCCCGAGGTCTAAACGCGTGTCTATTGCGCGTGTAAGGATATAAGTGAGAGACATTAGCATAAAGCAACGAAAGACGAAAAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACCTACTGGNCACTCCTCCTATATCCTATCCGTCCATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATGATGTGTTCACATGTTTGTCTGTCACTTTAGTTTAAGTTTGTAATCCTTAATTAACTATTCAATTGATTAATCTATCCCGCCCCGGTGCACGTCTGTGTTTAGTAGTTTAATAAGATATTGGCCTGCAGTGAGATCAAACACAACAGGCTGATAACATGTGTACGCAAAAGTCAGCATAGACGAGAGAAAGAGACAAAC]




>consensus_8932#2
AGATCCCCGAGGTCTAAACGCGTGTCTATTGCGCGTGTAAGGATATAAGTGAGAGACATT
AGCATAAAGCAACGAAAGACGAAAAAAAAAAATCCTATAACCTCCGGGCTTGGAATTGTT
AAGTAGAAAAACGACTTGCAGCTAGACCTACTGGNCACTCCTCCTATATCCTATCCGTCC
ATTCCTTTATGTACTTCCGATGATAGCGCCTTCCTTGATGATGTGTTCACATGTTTGTCT
GTCACTTTAGTTTAAGTTTGTAATCCTTAATTAACTATTCAATTGATTAATCTATCCCGC
CCCGGTGCACGTCTGTGTTTAGTAGTTTAATAAGATATTGGCCTGCAGTGAGATCAAACA
CAACAGGCTGATAACATGTGTACGCAAAAGTCAGCATAGACGAGAGAAAGAGACAAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8932#0      -----------------------------------------------TTGGTTATCCAGC 13
consensus_8932#1      ATGAGAGAGAAAAGAAAAGAGAGAGAGAGGCATTAAGGTGCATTTTATTGGTTATCCAGC 60
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      TTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACTGCAAAT 73
consensus_8932#1      TTCTTTGAGGTGATCTTAAGACATCTTTCACCGGGGGTTGTAGGTTCTTTCACCGCAAAT 120
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      ATCCTGTTATTTTTTGCCCATTGCCCAGNAAGCAGTTTTGATCAGTTTTAGGAGGTTCCC 133
consensus_8932#1      ATCCTGTTATTTTTTGCCCATTGCCCAGTAAGCAGTTTTGATCAGTTTTAGGAGGTTCCC 180
consensus_8932#2      ---------------------------------AGATCCCCGAGGTCTAAACGCGTGTCT 27
                                                       ** *       ** * *    **  * 

consensus_8932#0      TCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGC 193
consensus_8932#1      TCAGTTTCTCACAAATAGAAGGTTTGTGACAGATTTCATTTACAGGTAGAAACAGCCAGC 240
consensus_8932#2      ---ATTGCGCGTGTA-AGGATATAAGTGAGAGACATTAGCATAAAGCAACGAAAGACGAA 83
                          ** * *    * ** *  *  **** ***  * *     * * *   * ** *   

consensus_8932#0      TAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTAGT 253
consensus_8932#1      TAAGTAGAGTCCAGGGTGGTTTTGCAACCGTATTATTTTTAAGCAATTGTCTTAACTGGT 300
consensus_8932#2      AAAAAAAAATCCT--ATAACCTC-CGGGCTTGGAATTGTTAAGTAGAAAAAC-GACTTGC 139
                       **  * * ***    *    *  *   * *   *** ***** *         *** * 

consensus_8932#0      AGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATC 313
consensus_8932#1      AGTTGAAAACCGTACGAACAGTCCTTATTGCTAGTTAGCTCAAAGAGAGTAAGAACGATC 360
consensus_8932#2      AGCTAGACCTACTGGNCACTCCTCCTATATCCTATCCGTCCATTCCTT-TATGTACTTCC 198
                      ** *  *     *    **    * ***  *   *  *  **       ** * **   *

consensus_8932#0      TAACCTAACGG--TCCCTCATTATGCAATGAAGTATT-ACGACCCAATTTGCTTTGATAC 370
consensus_8932#1      TAACCTAACGG--TCCCTCATTATGCAATGAAGTATT-ACGACCCAATTTGCTTTGATAC 417
consensus_8932#2      GATGATAGCGCCTTCCTTGATGATGTGTTCACATGTTTGTCTGTCACTTTAGTTTAAGTT 258
                       *   ** **   *** * ** ***   * *  * **       ** ***  *** *   

consensus_8932#0      CGCAATCGATTCAATCGATTCATCAATGCACTGTGCCAGAACACTTTTTTCACACGTGTC 430
consensus_8932#1      CGCAATCGATTCAATCGATTCATCA------------------CTTTTTTCACACGTGTC 459
consensus_8932#2      TGTAATC--CTTAATTAACTATTCAATTGATT--------AATCTATCCCGCCCCGGTGC 308
                       * ****   * ***  * *  ***                  ** *     * **   *

consensus_8932#0      ACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGC- 489
consensus_8932#1      ACCTGGTTTGGCAAAAACCCGACAGGATTGAATGACTAGAACGCGTGTCTAATTGCAGC- 518
consensus_8932#2      ACGTCTGTGTTTAGTAGTTTAATAAGAT--ATTGGCCTGCA-GTGAGATCAAACACAACA 365
                      ** *   *    *  *     * * ***  * ** *  * * * * *   **   ** * 

consensus_8932#0      GTGTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACGAAAAAAAAA- 548
consensus_8932#1      GTTTAAGGATATAAAGTGAGAGACAATTAGCATAAAGCAACGAAAGAACGAAAAAAAAAA 578
consensus_8932#2      GGCTGATAACATGT-GTACGCAAAAGTCAGCATA----GACGAGAGAAAGAGACAAAC-- 418
                      *  * *  * **   **  *  * * * ******     **** **** ** * ***   

consensus_8932#0      -TCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACT 607
consensus_8932#1      ATCCTATAACCTCCGGGCTTGGAATTGTTAAGTAGAAAAACGACTTGCAGCTAGACTACT 638
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      GCACACCTCCTCCTATATCCCTATCCCGCTCCATTCCTTTATGTACTTCCGATGATAGCG 667
consensus_8932#1      GCACACCTCCTCCTATA------------------------------------------- 655
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      CCTTCCTTGATTTGATGTTGTTACATGTTGTTGTTACTTTAGTTTAAGTTGTAATCCTTA 727
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      ATTAACTATTAATGATTAATCTATCCCGCCCCGGTGCACGTTGTGTTTTTAGTAGTTTAA 787
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      TAAGATATGGCTGCAGTGAGATCAAACACAACAGGCGATAACATGTGTACGCAAAAGTAG 847
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      ATAGAGAGAGAAAGAGAAAACGAATGCGTTAACACAGGAAACAAATGAATGAGAGAAAGC 907
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      TTAAGCGGAAAGCGTTACATTTTTGTGTTATTAAGTCAGGATATCTATTTTTTGTTGGTG 967
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      TTGCATACATGTTGCGCCCGAGCATACATGTCGTCCTGCGCGCGCGAGAGAGCAATAGCA 1027
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      AAATGCATCTGTAATTATTATTTATTTATCTATAAACCACTAATATAATTATGCCGCCCG 1087
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      GAAATTTATTATGCCCCTCCTGAGATACCCCATTTTTCCCATGTAATAGTGCGTCGCAAC 1147
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      CGTCCGCTCGCCCTCCCTGGTTTTATCGTACGCTAATATTATTTACAATTCTTGCATGTA 1207
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      AACACAAGCAGCACACTTGCGCCCGCGCTTGACGATAGGAGGGAGAGGGCTCGATGGAGG 1267
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      GGATGCGATCAATGAATGAATGTAATAATGTTGTAGTCCAACCACCTCCCGTTCGGGTTT 1327
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      GGAAAAAGTTGAAAAATAAACATATAAAGGCAAAATCCTCCGCGCGCTTAACGCAACGCT 1387
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      CCCCATCAGTCACCTCCCCCTCCGGAGACTACTAACGCAAGAAGTCTTTTTTATATTTTA 1447
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      GTTTACTTTCGATTTAGTATATTTTGTAAAAAAAAATACAGTGTGTTTTGAATACAGCAA 1507
consensus_8932#1      ------------------------------------------------------------
consensus_8932#2      ------------------------------------------------------------
                                                                                  

consensus_8932#0      ATGAAATAAAATGAAACAAACAACCAT 1534
consensus_8932#1      ---------------------------
consensus_8932#2      ---------------------------